View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1141_low_4 (Length: 794)
Name: NF1141_low_4
Description: NF1141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1141_low_4 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 629; Significance: 0; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 629; E-Value: 0
Query Start/End: Original strand, 28 - 693
Target Start/End: Original strand, 896381 - 897046
Alignment:
| Q |
28 |
attattctatgaaacggtataatgatgagtcagggttttaggatgtttggtttagtttgaaatactgagatttgaagacccgtctctaatgagtatttgg |
127 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
896381 |
attattctatgaaacggtataatgatgagtcagggttttaggatgtttggtttagtttgaaatactgagatttgaagacccgtctctaatgagtatttgg |
896480 |
T |
|
| Q |
128 |
ttaagaaaatgagataaagtgataagtgttctctaatgagtattatacttgtgatgagatttattgatatagggtagattgaatacttaggatattgtta |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
896481 |
ttaagaaaatgagataaagtgataagtgttctctaatgagtattatacttgtgatgagatttattgatatagggtagattgaatacttaggatattgtta |
896580 |
T |
|
| Q |
228 |
ttgcatattgagtagaaatggggttttggatgagatgatggtgcatttaactccaaaatgtttataattaatgttatgttatgtgtagcttgtgagttgt |
327 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
896581 |
ttgcatattgagtacaaatggggttttggatgagatgatggtgcatttaactccaaaatatttataattaatgttatgttatgtgtagcttgtgagttgt |
896680 |
T |
|
| Q |
328 |
ataactctattttgtttatcatctaaaactacagtttttctatgagacgctaatgggnnnnnnngaacgattgcttttgcagcatttctgctgaaactaa |
427 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
896681 |
ataactctattttgtttatcatctaaaactacagtttttctatgagacgctaatgggaaaaaaagaacgattgcttttgcagcatttctgctgaaactaa |
896780 |
T |
|
| Q |
428 |
gtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatgagaatgtttgttttaacacaattttagatttatcgccagcttat |
527 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
896781 |
gtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatgagaatgtttgttttaacacaattttagattcatcgccagcttat |
896880 |
T |
|
| Q |
528 |
gcaccagcttatgaagatcaaacaaatattaccttcagtctagaatattaatgatgtttagaagtttgatatgacaatagatattttgttctaactcaca |
627 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
896881 |
gcaccagcttatgaagatcacacaaatattaccttcagtctagaatattaatgatgtttagaagtttgatatgacaatagatattttgttctaactcaca |
896980 |
T |
|
| Q |
628 |
agtattttgttccaacacttataaaaaacagtattgtgccttctttgttgcattgtggatgtatat |
693 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
896981 |
agtattttgttccaacacttataaaaaacagtattgtgccttctttgttgcattgtggatgtatat |
897046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 268 - 599
Target Start/End: Original strand, 1192749 - 1193073
Alignment:
| Q |
268 |
gtgcatttaactccaaaatgtttataattaatgttatgttatgtgtagcttgtgagttgtataactctatttt-gtttatcatctaaaactacagttttt |
366 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||| || ||||||||||| || |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1192749 |
gtgcatttaactaaaaaatatttataattaatgttatgt-----gtggcttgtgagttcta--actctatttttgtttatcatctaaaactacagttttt |
1192841 |
T |
|
| Q |
367 |
ctatgagacgctaatgggnnnnnnnga--acgattgcttttgcagcatttctgctgaaactaagtgttggtggcatggcttgaaggatgtgaaagtcata |
464 |
Q |
| |
|
||||||||||||||||| || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1192842 |
gtatgagacgctaatgggaaaaaaagagaacaattgcttttgca---tttctgctgaaactaagtgttggtggcatggcttgaaggatgtgaaagtcata |
1192938 |
T |
|
| Q |
465 |
agctctaaggagattgatgagaatgtttgttttaacacaattttagatttatcgccagcttatgcaccagcttatgaagatcaaacaaatattaccttca |
564 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| ||| ||||||||||||||||| |
|
|
| T |
1192939 |
agctctaagaagattgatgagaatgtttgttttaacacaattttagattcatcgccagcttatgcaccagaatttgaacatcgaacaaatattaccttca |
1193038 |
T |
|
| Q |
565 |
gtctagaatattaatgatgtttagaagtttgatat |
599 |
Q |
| |
|
| ||||||| |||||| |||||||||||||||||| |
|
|
| T |
1193039 |
ggctagaattttaatgttgtttagaagtttgatat |
1193073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 268 - 599
Target Start/End: Original strand, 1181825 - 1182145
Alignment:
| Q |
268 |
gtgcatttaactccaaaatgtttataattaatgttatgttatgtgtagcttgtgagttgtataactctattttgtttatcatctaaaactacagtttttc |
367 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
1181825 |
gtgcattttactccaaaatgtttataattaatgttat---atgtg--gcttgtgagttctg--actctattttgtttatcatctaaaactgcagattttc |
1181917 |
T |
|
| Q |
368 |
tatgagacgctaatgggnnnnnnngaacgattgcttttgcagcatttctgctgaaactaagtgttggtggcatggcttgaaggatgtgaaagtcataagc |
467 |
Q |
| |
|
||||||||||||||| | || |||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1181918 |
tatgagacgctaatgagaaaaaaaga-cgattgcttttgca---tttctgctgaaattaagtgttggtggcatgacttgaaggatgtgaaagtcataagc |
1182013 |
T |
|
| Q |
468 |
tctaaggagattgatgagaatgtttgttttaacacaattttagatttatcgccagcttatgcaccagcttatgaagatcaaacaaatattaccttcagtc |
567 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || | |||||||||||||||||||||| | |
|
|
| T |
1182014 |
tctaagaagattgatgagaatgtttgttttaacacaattttagattcatcgccagcttatgcaccaaaatttgcacatcaaacaaatattaccttcaggc |
1182113 |
T |
|
| Q |
568 |
tagaatattaatgatgtttagaagtttgatat |
599 |
Q |
| |
|
|||||| |||||| |||||||||||||||||| |
|
|
| T |
1182114 |
tagaattttaatgttgtttagaagtttgatat |
1182145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 113 - 268
Target Start/End: Original strand, 1182299 - 1182454
Alignment:
| Q |
113 |
ctaatgagtatttggttaagaaaatgagataaagtgataagtgttctctaatgagtattatacttgtgatgagatttattgatatagggtagattgaata |
212 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
1182299 |
ctaatgaatatgtggttaagaaaatgtgataaagtgataagtgctctctaataagtattatacttgtgatgagatttattgatatatggtatattgaata |
1182398 |
T |
|
| Q |
213 |
cttaggatattgttattgcatattgagtagaaatggggttttggatgagatgatgg |
268 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||| |||| |
|
|
| T |
1182399 |
cttaggatattgttattgcatattgagtacaaatggggttttggatcagataatgg |
1182454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 329 - 511
Target Start/End: Original strand, 1187101 - 1187279
Alignment:
| Q |
329 |
taactctattttgtttatcatctaaaactacagtttttctatgagacgctaatgggnnnnnnngaacgattgcttttgcagcatttctgctgaaactaag |
428 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | |||||||||||||| ||||| || | || ||| |
|
|
| T |
1187101 |
taactctattttgtttatcatctaaaactacaatttttctatgagacgctaatgagaaaaaaagg-cgattgcttttgca---tttcttctaatacgaag |
1187196 |
T |
|
| Q |
429 |
tgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatgagaatgtttgttttaacacaattttaga |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||| || |||||||| |
|
|
| T |
1187197 |
tgttggtggcatggcttgaaggatgtgaaagtcacaagctctatgaagattgatgagaatgtttgttttaagaccattttaga |
1187279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 329 - 491
Target Start/End: Original strand, 1197331 - 1197492
Alignment:
| Q |
329 |
taactctattttgtttatcatctaaaactacagtttttctatgagacgctaatgggnnnnnnn--gaacgattgcttttgcagcatttctgctgaaacta |
426 |
Q |
| |
|
||||||||||||||| ||| || | ||||||||||||||||||||||| ||||| | |||||| ||||||||||| ||||| ||| || | |
|
|
| T |
1197331 |
taactctattttgttaatcgtcgataactacagtttttctatgagacgttaatgagaaaaaaaaagaacgactgcttttgcag---ttctgatgatacaa |
1197427 |
T |
|
| Q |
427 |
agtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatgagaatgtt |
491 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||| ||| | |||| |||||||||||| |
|
|
| T |
1197428 |
agtgttggtggcatgacttgaaggatgtgaaagtcacgagcactatgaagatcgatgagaatgtt |
1197492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 897125 - 897183
Alignment:
| Q |
205 |
attgaatacttaggatattgttattgcatattgagtagaaatggggttttggatgagatg |
264 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
897125 |
attgaatacttaggatat-gttattgcatattgagtacaaatggggttttggatgagatg |
897183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 1237511 - 1237376
Alignment:
| Q |
111 |
ctctaatgagtatttggttaagaaaatgagataaagtgataagtgttctctaatgagtat--------tatacttgtgatgagatttattgatatagggt |
202 |
Q |
| |
|
||||||||||||| |||||||||||||| |||| |||||| || |||||||||||||| |||||||||| |||||||| ||||| || | |
|
|
| T |
1237511 |
ctctaatgagtatgtggttaagaaaatgtgata--gtgataggttctctctaatgagtatatgattattatacttgtgttgagatttgttgatgtatgac |
1237414 |
T |
|
| Q |
203 |
agattgaatacttaggatattgttattgcatattgagt |
240 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
1237413 |
atattgagtacttaggatattgttattgcatattgagt |
1237376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 693
Target Start/End: Original strand, 1193133 - 1193217
Alignment:
| Q |
609 |
tattttgttctaactcacaagtattttgttccaacacttataaaaaacagtattgtgccttctttgttgcattgtggatgtatat |
693 |
Q |
| |
|
|||||||||| || || ||||||||||||||||||||||||||| |||||| |||||||||||| |||||| || |||| |||| |
|
|
| T |
1193133 |
tattttgttccaagtcccaagtattttgttccaacacttataaattacagtaatgtgccttctttattgcatcgtagatgaatat |
1193217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 633 - 693
Target Start/End: Original strand, 1182207 - 1182267
Alignment:
| Q |
633 |
tttgttccaacacttataaaaaacagtattgtgccttctttgttgcattgtggatgtatat |
693 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||||||||| ||| ||||||||||||||| |
|
|
| T |
1182207 |
tttgttccaacacttataaaataccgtactgtgccttctttattgtattgtggatgtatat |
1182267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 1193243 - 1193303
Alignment:
| Q |
110 |
tctctaatgagtatttggttaagaaaatgagataaagtgataagtgttctctaatgagtat |
170 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||| || ||||||||| ||||| ||||||| |
|
|
| T |
1193243 |
tctctaatgagtatgtggttaagaaaatgtgatgaaatgataagtgctctcttgtgagtat |
1193303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 793908 - 793867
Alignment:
| Q |
114 |
taatgagtatttggttaagaaaatgagataaagtgataagtg |
155 |
Q |
| |
|
|||||| ||| |||||||||||||| |||||||||||||||| |
|
|
| T |
793908 |
taatgaatatgtggttaagaaaatgtgataaagtgataagtg |
793867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 188; Significance: 1e-101; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 268 - 599
Target Start/End: Original strand, 10203224 - 10203547
Alignment:
| Q |
268 |
gtgcatttaactccaaaatgtttataattaatgttatgttatgtgtagcttgtgagttgtataactctattttgtttatcatctaaaactacagtttttc |
367 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| || |||| ||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10203224 |
gtgcatttatctccaaaatgtttataattaatgtt---ttctgtg--gcttgtgagttcta--actctattttgtttatcatctaaaactacagtttttt |
10203316 |
T |
|
| Q |
368 |
tatgagacgctaatgggnnnnnnnga--acgattgcttttgcagcatttctgctgaaactaagtgttggtggcatggcttgaaggatgtgaaagtcataa |
465 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10203317 |
tatgagacgctaatgggaaaaaaagagaacgattgcttttgca---tttctactgaaactaagtgttggtggcatggcttgaaggatgtgaaagtcataa |
10203413 |
T |
|
| Q |
466 |
gctctaaggagattgatgagaatgtttgttttaacacaattttagatttatcgccagcttatgcaccagcttatgaagatcaaacaaatattaccttcag |
565 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10203414 |
gctctaagaagattgatgagaatgtttgttttaacacaattttagattcgtcgccagcttatgcaccagcttatccagatcaaacaaatattaccttcaa |
10203513 |
T |
|
| Q |
566 |
tctagaatattaatgatgtttagaagtttgatat |
599 |
Q |
| |
|
||||||| ||||| ||||||||||||| |||| |
|
|
| T |
10203514 |
gctagaattttaattttgtttagaagtttaatat |
10203547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 10203831 - 10203891
Alignment:
| Q |
110 |
tctctaatgagtatttggttaagaaaatgagataaagtgataagtgttctctaatgagtat |
170 |
Q |
| |
|
|||||||||||||| ||||||| |||||| ||| |||||||||||| |||||| ||||||| |
|
|
| T |
10203831 |
tctctaatgagtatgtggttaaaaaaatgtgatgaagtgataagtgctctctagtgagtat |
10203891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 491
Target Start/End: Original strand, 49611893 - 49611958
Alignment:
| Q |
426 |
aagtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatgagaatgtt |
491 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| || || ||| | ||||||||||||||| |
|
|
| T |
49611893 |
aagtgttggtggcatggcttgaaggatttgaaagtctcaacttcaaagaaaattgatgagaatgtt |
49611958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 409 - 491
Target Start/End: Original strand, 5171567 - 5171649
Alignment:
| Q |
409 |
gcatttctgctgaaactaagtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatgagaatgtt |
491 |
Q |
| |
|
|||||||| ||| || ||||||||||||||||||||||||||||||||||| | |||||||| | ||||||| ||||||||| |
|
|
| T |
5171567 |
gcatttcttgtgataccaagtgttggtggcatggcttgaaggatgtgaaagttacaagctctatgaagattgacgagaatgtt |
5171649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 423 - 488
Target Start/End: Complemental strand, 1795888 - 1795823
Alignment:
| Q |
423 |
actaagtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatgagaat |
488 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| |
|
|
| T |
1795888 |
actaagtgttggtggcatggcttgaagaatgtgaaagtcataagctcggtgaagattgatgagaat |
1795823 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 423 - 484
Target Start/End: Original strand, 5185121 - 5185182
Alignment:
| Q |
423 |
actaagtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatga |
484 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||| |
|
|
| T |
5185121 |
actaagtgttggtggcatggcttgaagaatgtgaaagtcataagctcaatgaagattgatga |
5185182 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 423 - 488
Target Start/End: Original strand, 5195115 - 5195180
Alignment:
| Q |
423 |
actaagtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatgagaat |
488 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5195115 |
actaagtgttggtggcatggcttgaagaatgtgaaagtcataagctcggtgaagattgatgagaat |
5195180 |
T |
|
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Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 423 - 491
Target Start/End: Original strand, 5207113 - 5207181
Alignment:
| Q |
423 |
actaagtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatgagaatgtt |
491 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||||| |
|
|
| T |
5207113 |
actaggtgttggtggcatggcttgaaggatgtaaaagtcacgagctctatgaagattgatgagaatgtt |
5207181 |
T |
|
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Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 5177679 - 5177725
Alignment:
| Q |
423 |
actaagtgttggtggcatggcttgaaggatgtgaaagtcataagctc |
469 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5177679 |
actaagtgttggtggcatggcttgaagaatgtgaaagtcataagctc |
5177725 |
T |
|
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Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 5198971 - 5198925
Alignment:
| Q |
423 |
actaagtgttggtggcatggcttgaaggatgtgaaagtcataagctc |
469 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5198971 |
actaagtgttggtggcatggcttgaagaatgtgaaagtcataagctc |
5198925 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 6231631 - 6231677
Alignment:
| Q |
423 |
actaagtgttggtggcatggcttgaaggatgtgaaagtcataagctc |
469 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6231631 |
actaagtgttggtggcatggcttgaagaatgtgaaagtcataagctc |
6231677 |
T |
|
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Target: chr7 (Bit Score: 46; Significance: 8e-17; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 423 - 484
Target Start/End: Original strand, 5178813 - 5178874
Alignment:
| Q |
423 |
actaagtgttggtggcatggcttgaaggatgtgaaagtcataagctctaaggagattgatga |
484 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||| |
|
|
| T |
5178813 |
actaagtgttggtggcatggcttgaagaatgtgaaagtcataagctcaatgaagattgatga |
5178874 |
T |
|
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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 352 - 491
Target Start/End: Original strand, 8306682 - 8306820
Alignment:
| Q |
352 |
aaaactacagtttttctatgagacgctaatgggnnnnnnnga--acgattgcttttgcagcatttctgctgaaactaagtgttggtggcatggcttgaag |
449 |
Q |
| |
|
|||||||||||||||||||||||| |||||| | || |||| |||||||||||| ||| ||| || |||||||||||||||||||||||| |
|
|
| T |
8306682 |
aaaactacagtttttctatgagactctaatgagaagaaaagacgacgactgcttttgcagc---tctaatgatacaaagtgttggtggcatggcttgaag |
8306778 |
T |
|
| Q |
450 |
gatgtgaaagtcataagctctaaggagattgatgagaatgtt |
491 |
Q |
| |
|
||| ||||||||| | |||| | | | ||||||||||||||| |
|
|
| T |
8306779 |
gatttgaaagtcacacgctcaatgaaaattgatgagaatgtt |
8306820 |
T |
|
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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 8551955 - 8551885
Alignment:
| Q |
303 |
atgttatgtgtagcttgtgagttgtataactctattttgtttatcatctaaaactacagtttttctatgagac |
375 |
Q |
| |
|
|||||||||| ||||| |||||| ||||| ||||||| || || || |||||||||||||||||||||||| |
|
|
| T |
8551955 |
atgttatgtggagcttctgagtt--ataacgctattttattaattgtccaaaactacagtttttctatgagac |
8551885 |
T |
|
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