View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1141_low_47 (Length: 272)
Name: NF1141_low_47
Description: NF1141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1141_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 30 - 244
Target Start/End: Original strand, 20270037 - 20270251
Alignment:
| Q |
30 |
gagaagcaaaggtacacgacatatccacaagccgagtagtatgacaagcaccgtgagtagtccccacccccactgaaatgggcattggatccccctcacc |
129 |
Q |
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| T |
20270037 |
gagaagcaaaggtacacgacatatccacaagccgagtagtatgacaagcaccgtgagtagtccccacccccaccaaaatgggcattggatccccctcacc |
20270136 |
T |
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| Q |
130 |
gtgcacaagagcattagagaaagaagtggaagtcatacttggccccccgaaggagacaaacgaagatctgccacaccatgccttcccggagagtccctcg |
229 |
Q |
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| T |
20270137 |
gtgcacaagagcattagagaaagaagtggaagtcatacttgtccccccgaaggagacagacgaagatccgccacaccatgccttcccggagagtccctcg |
20270236 |
T |
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| Q |
230 |
agctccccctatgct |
244 |
Q |
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||||||||||||||| |
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| T |
20270237 |
agctccccctatgct |
20270251 |
T |
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