View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1141_low_49 (Length: 269)
Name: NF1141_low_49
Description: NF1141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1141_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 29 - 256
Target Start/End: Original strand, 15754366 - 15754593
Alignment:
| Q |
29 |
agttttcagcctagttgatgcttgtagatcaggtgctttagaggcaatggaagagctaaagttattaggagtcagatcagtcatgctgacaggagatagc |
128 |
Q |
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| T |
15754366 |
agttttcagcctagttgatgcttgtagatcaggtgctttagaggcaatggaagagctaaagttattaggagtcagatcagtcatgctgacaggagatagc |
15754465 |
T |
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| Q |
129 |
tctcaggttgctatgtatgttcagagtcaggtatgatcaataatgcatatatttctaaaactaaaatgaagattttgttattaaccttataagttttgac |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15754466 |
tctcaggttgctatgtatgttcagagtcaggtatgatcaataatgcatatatttctaaaactaaaatgaagattttgttattaaccttataagttttgac |
15754565 |
T |
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| Q |
229 |
cattaatgcttcatttgtttacttattc |
256 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
15754566 |
cattaatgcttcatttgtttacttattc |
15754593 |
T |
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