View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11421_low_12 (Length: 346)

Name: NF11421_low_12
Description: NF11421
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11421_low_12
NF11421_low_12
[»] chr4 (82 HSPs)
chr4 (1-344)||(6666420-6666765)
chr4 (62-252)||(40717318-40717510)
chr4 (62-311)||(22231127-22231377)
chr4 (108-311)||(28245580-28245782)
chr4 (38-296)||(25323867-25324126)
chr4 (62-311)||(35788674-35788924)
chr4 (62-252)||(35796854-35797046)
chr4 (92-231)||(35819026-35819165)
chr4 (62-252)||(50543442-50543636)
chr4 (156-297)||(7572539-7572680)
chr4 (62-253)||(52559582-52559777)
chr4 (62-252)||(6218219-6218411)
chr4 (39-260)||(7926320-7926537)
chr4 (157-259)||(25324139-25324241)
chr4 (92-258)||(8902674-8902838)
chr4 (62-252)||(11036623-11036815)
chr4 (149-258)||(8902980-8903086)
chr4 (92-252)||(36686021-36686178)
chr4 (62-205)||(53814853-53814998)
chr4 (92-247)||(4645689-4645844)
chr4 (106-205)||(4905660-4905759)
chr4 (157-252)||(5398587-5398682)
chr4 (106-257)||(30530034-30530185)
chr4 (26-130)||(35609489-35609595)
chr4 (130-311)||(27634135-27634315)
chr4 (65-206)||(18528374-18528523)
chr4 (69-205)||(40716544-40716683)
chr4 (213-297)||(50870548-50870631)
chr4 (62-266)||(32002338-32002542)
chr4 (62-205)||(12869187-12869332)
chr4 (183-229)||(20726737-20726783)
chr4 (106-252)||(21646379-21646524)
chr4 (92-190)||(34357969-34358067)
chr4 (234-311)||(35609544-35609620)
chr4 (26-130)||(50870480-50870585)
chr4 (92-136)||(17111610-17111654)
chr4 (62-136)||(53828516-53828592)
chr4 (62-146)||(9685413-9685499)
chr4 (62-260)||(24513232-24513428)
chr4 (92-267)||(31944970-31945144)
chr4 (92-146)||(14783170-14783224)
chr4 (62-136)||(1518179-1518255)
chr4 (62-128)||(20821988-20822056)
chr4 (62-136)||(21498369-21498445)
chr4 (62-128)||(21498810-21498878)
chr4 (87-228)||(22445494-22445635)
chr4 (26-136)||(35609704-35609816)
chr4 (62-132)||(40726736-40726808)
chr4 (62-132)||(50543327-50543399)
chr4 (26-128)||(1333508-1333614)
chr4 (25-146)||(5846124-5846247)
chr4 (37-130)||(22827528-22827623)
chr4 (92-136)||(25052899-25052943)
chr4 (84-136)||(52827418-52827470)
chr4 (92-128)||(53814675-53814711)
chr4 (216-311)||(6666254-6666348)
chr4 (62-130)||(22845446-22845516)
chr4 (62-130)||(22863489-22863559)
chr4 (252-299)||(28501560-28501607)
chr4 (62-130)||(35788909-35788979)
chr4 (62-130)||(53559289-53559359)
chr4 (247-297)||(7572770-7572820)
chr4 (200-242)||(25669898-25669940)
chr4 (62-130)||(39902562-39902632)
chr4 (95-145)||(50870683-50870733)
chr4 (62-128)||(2463821-2463889)
chr4 (84-145)||(2516000-2516061)
chr4 (194-306)||(4455604-4455716)
chr4 (166-267)||(5398309-5398408)
chr4 (62-128)||(9685647-9685715)
chr4 (216-260)||(12005574-12005619)
chr4 (312-341)||(12448758-12448787)
chr4 (92-172)||(13637436-13637517)
chr4 (62-128)||(16066080-16066148)
chr4 (62-128)||(28245527-28245595)
chr4 (92-133)||(36685871-36685912)
chr4 (62-136)||(37836095-37836171)
chr4 (192-293)||(41853522-41853623)
chr4 (184-260)||(1215894-1215970)
chr4 (312-344)||(7949448-7949480)
chr4 (312-344)||(37109345-37109377)
chr4 (92-128)||(54054806-54054842)
[»] scaffold0519 (2 HSPs)
scaffold0519 (41-311)||(1910-2181)
scaffold0519 (62-130)||(2166-2236)
[»] chr8 (73 HSPs)
chr8 (41-311)||(11232248-11232519)
chr8 (62-252)||(41790674-41790865)
chr8 (62-283)||(39052776-39052998)
chr8 (62-252)||(20301276-20301468)
chr8 (62-252)||(21087908-21088100)
chr8 (62-252)||(8084142-8084334)
chr8 (92-259)||(10615441-10615608)
chr8 (117-312)||(12688144-12688338)
chr8 (96-267)||(26208110-26208282)
chr8 (64-312)||(20094613-20094861)
chr8 (92-252)||(3157436-3157596)
chr8 (87-231)||(31197657-31197800)
chr8 (40-258)||(37868455-37868674)
chr8 (126-247)||(18004211-18004332)
chr8 (37-198)||(24532352-24532515)
chr8 (157-252)||(3157121-3157216)
chr8 (41-136)||(12317040-12317137)
chr8 (157-297)||(8466556-8466695)
chr8 (62-220)||(15042793-15042955)
chr8 (178-258)||(37868179-37868259)
chr8 (160-311)||(39052591-39052741)
chr8 (62-165)||(11232158-11232263)
chr8 (92-297)||(38476085-38476293)
chr8 (157-242)||(35682903-35682988)
chr8 (92-252)||(5932061-5932221)
chr8 (101-172)||(28213060-28213132)
chr8 (26-139)||(38475726-38475841)
chr8 (62-146)||(34842693-34842779)
chr8 (183-258)||(37867939-37868014)
chr8 (162-297)||(39960074-39960207)
chr8 (62-146)||(19256803-19256889)
chr8 (92-311)||(422271-422490)
chr8 (183-239)||(38475975-38476031)
chr8 (161-252)||(7669535-7669625)
chr8 (62-146)||(17469833-17469919)
chr8 (62-130)||(27204979-27205049)
chr8 (62-130)||(27205077-27205147)
chr8 (62-130)||(27205175-27205245)
chr8 (62-130)||(35682780-35682850)
chr8 (37-136)||(5590361-5590462)
chr8 (64-202)||(37001243-37001386)
chr8 (230-311)||(7729890-7729971)
chr8 (66-136)||(10884084-10884155)
chr8 (62-128)||(19256587-19256655)
chr8 (62-128)||(24075307-24075375)
chr8 (183-231)||(5675867-5675915)
chr8 (198-258)||(8849335-8849395)
chr8 (178-258)||(29005989-29006068)
chr8 (106-226)||(31079478-31079598)
chr8 (183-311)||(31079616-31079744)
chr8 (183-239)||(38475872-38475928)
chr8 (39-171)||(42049644-42049779)
chr8 (251-311)||(44931236-44931296)
chr8 (62-146)||(4828083-4828169)
chr8 (92-131)||(37001511-37001550)
chr8 (66-130)||(39960211-39960277)
chr8 (38-84)||(8466535-8466581)
chr8 (92-226)||(10614842-10614976)
chr8 (92-130)||(25325693-25325731)
chr8 (92-130)||(42846604-42846642)
chr8 (66-130)||(3157326-3157391)
chr8 (183-252)||(5589852-5589921)
chr8 (101-146)||(10615687-10615732)
chr8 (62-128)||(17477080-17477148)
chr8 (62-140)||(26800501-26800581)
chr8 (62-127)||(4828308-4828375)
chr8 (106-218)||(4873602-4873714)
chr8 (62-131)||(18004094-18004165)
chr8 (312-344)||(33017264-33017296)
chr8 (92-128)||(34653197-34653233)
chr8 (312-344)||(35690058-35690090)
chr8 (92-128)||(39743576-39743612)
chr8 (311-343)||(43594313-43594345)
[»] chr5 (59 HSPs)
chr5 (62-311)||(41666811-41667062)
chr5 (106-311)||(95320-95524)
chr5 (40-252)||(15480315-15480529)
chr5 (92-297)||(24346569-24346774)
chr5 (92-297)||(18333533-18333736)
chr5 (87-252)||(32908830-32908994)
chr5 (62-252)||(24531614-24531806)
chr5 (62-297)||(9368610-9368846)
chr5 (112-297)||(24269938-24270123)
chr5 (92-252)||(26137221-26137382)
chr5 (63-252)||(25258178-25258369)
chr5 (63-252)||(25321968-25322159)
chr5 (90-242)||(43117692-43117844)
chr5 (41-252)||(24528534-24528747)
chr5 (157-297)||(8081182-8081321)
chr5 (41-146)||(2063717-2063823)
chr5 (92-252)||(6919306-6919466)
chr5 (96-311)||(17150287-17150501)
chr5 (185-283)||(33337320-33337417)
chr5 (185-247)||(2716476-2716538)
chr5 (106-252)||(17352546-17352691)
chr5 (92-205)||(21209845-21209958)
chr5 (92-252)||(38731715-38731875)
chr5 (62-131)||(13296907-13296978)
chr5 (62-131)||(25258092-25258163)
chr5 (62-131)||(25321882-25321953)
chr5 (157-252)||(15590050-15590145)
chr5 (62-130)||(41666756-41666826)
chr5 (89-210)||(2985930-2986052)
chr5 (63-146)||(19522103-19522188)
chr5 (111-220)||(6413566-6413675)
chr5 (62-136)||(13296688-13296763)
chr5 (183-252)||(18885365-18885434)
chr5 (183-252)||(30770161-30770230)
chr5 (311-344)||(31074281-31074314)
chr5 (183-255)||(6415810-6415882)
chr5 (92-136)||(8081106-8081150)
chr5 (87-257)||(17423742-17423912)
chr5 (120-252)||(20510754-20510885)
chr5 (62-131)||(21306902-21306973)
chr5 (62-131)||(21314740-21314811)
chr5 (25-146)||(24487628-24487751)
chr5 (33-118)||(37405075-37405162)
chr5 (205-240)||(395182-395217)
chr5 (92-146)||(8098364-8098418)
chr5 (92-130)||(12034737-12034775)
chr5 (111-229)||(16704618-16704736)
chr5 (92-130)||(28510138-28510176)
chr5 (195-285)||(31974355-31974443)
chr5 (91-136)||(1028391-1028436)
chr5 (92-145)||(1564551-1564604)
chr5 (62-128)||(27132994-27133062)
chr5 (38-119)||(7369715-7369798)
chr5 (312-344)||(14285211-14285243)
chr5 (92-132)||(15480606-15480646)
chr5 (37-130)||(18333464-18333559)
chr5 (312-344)||(25627107-25627139)
chr5 (196-232)||(42385053-42385089)
chr5 (312-344)||(43442246-43442278)
[»] chr2 (55 HSPs)
chr2 (62-252)||(2029784-2029976)
chr2 (62-283)||(40379291-40379513)
chr2 (83-267)||(21383531-21383716)
chr2 (92-311)||(16419314-16419532)
chr2 (62-252)||(14466287-14466479)
chr2 (62-311)||(5711493-5711744)
chr2 (38-277)||(13210517-13210758)
chr2 (101-247)||(40149118-40149264)
chr2 (92-231)||(93252-93391)
chr2 (106-297)||(33606122-33606312)
chr2 (157-311)||(37812322-37812475)
chr2 (87-252)||(15124660-15124825)
chr2 (149-264)||(21383390-21383505)
chr2 (67-222)||(24395883-24396040)
chr2 (111-252)||(16533378-16533519)
chr2 (92-210)||(10523066-10523183)
chr2 (92-198)||(93558-93664)
chr2 (41-253)||(17525210-17525428)
chr2 (62-252)||(36352038-36352228)
chr2 (118-258)||(13250128-13250268)
chr2 (62-130)||(17719581-17719651)
chr2 (46-130)||(19570973-19571059)
chr2 (106-165)||(31700936-31700995)
chr2 (186-231)||(878032-878077)
chr2 (62-132)||(2030019-2030091)
chr2 (157-250)||(18607123-18607216)
chr2 (62-136)||(28407786-28407862)
chr2 (183-252)||(44404038-44404107)
chr2 (41-130)||(16419496-16419587)
chr2 (62-219)||(17719415-17719574)
chr2 (62-146)||(2324255-2324341)
chr2 (62-130)||(5711438-5711508)
chr2 (62-130)||(40379208-40379278)
chr2 (87-128)||(17854693-17854734)
chr2 (87-136)||(27897599-27897648)
chr2 (199-264)||(41069261-41069326)
chr2 (118-258)||(42895320-42895461)
chr2 (92-136)||(10571017-10571061)
chr2 (92-140)||(33381180-33381228)
chr2 (183-239)||(44529729-44529785)
chr2 (62-146)||(29718343-29718429)
chr2 (162-297)||(31001815-31001950)
chr2 (314-344)||(4060208-4060238)
chr2 (92-146)||(5509126-5509180)
chr2 (92-130)||(31700744-31700782)
chr2 (62-124)||(1926446-1926510)
chr2 (62-128)||(19191611-19191679)
chr2 (182-218)||(4772705-4772741)
chr2 (26-82)||(8227328-8227384)
chr2 (40-130)||(11020551-11020643)
chr2 (62-131)||(14927117-14927188)
chr2 (87-135)||(21591824-21591872)
chr2 (186-241)||(26006596-26006649)
chr2 (92-140)||(37840384-37840432)
chr2 (87-210)||(38629883-38630007)
[»] chr6 (42 HSPs)
chr6 (62-297)||(13353216-13353452)
chr6 (62-297)||(33796341-33796577)
chr6 (62-311)||(4868631-4868882)
chr6 (62-283)||(33494554-33494776)
chr6 (62-252)||(9705035-9705226)
chr6 (41-252)||(12330056-12330269)
chr6 (38-252)||(6542820-6543036)
chr6 (92-242)||(3680059-3680209)
chr6 (110-252)||(6400732-6400873)
chr6 (62-242)||(33631692-33631873)
chr6 (62-168)||(8026404-8026512)
chr6 (92-205)||(15082066-15082181)
chr6 (157-252)||(17147772-17147867)
chr6 (62-146)||(27653232-27653318)
chr6 (157-252)||(31961055-31961150)
chr6 (92-218)||(6054216-6054342)
chr6 (62-132)||(11721920-11721992)
chr6 (92-172)||(11085628-11085708)
chr6 (55-128)||(15081909-15081984)
chr6 (62-130)||(4868576-4868646)
chr6 (62-172)||(8001506-8001619)
chr6 (65-136)||(30256596-30256669)
chr6 (92-136)||(20373617-20373661)
chr6 (166-258)||(20830634-20830726)
chr6 (62-136)||(21690737-21690813)
chr6 (92-136)||(30256859-30256903)
chr6 (92-240)||(32290775-32290923)
chr6 (62-130)||(6623409-6623479)
chr6 (62-130)||(9705269-9705339)
chr6 (62-130)||(19712967-19713037)
chr6 (92-130)||(4161845-4161883)
chr6 (92-130)||(4223465-4223503)
chr6 (65-128)||(8026622-8026687)
chr6 (185-247)||(9496432-9496494)
chr6 (62-146)||(19712729-19712817)
chr6 (192-258)||(27993512-27993578)
chr6 (62-146)||(5572599-5572684)
chr6 (83-128)||(8566960-8567005)
chr6 (192-248)||(832887-832943)
chr6 (87-210)||(2736320-2736444)
chr6 (87-127)||(5572386-5572426)
chr6 (62-135)||(27772729-27772804)
[»] chr7 (53 HSPs)
chr7 (62-252)||(25620151-25620343)
chr7 (62-311)||(29469620-29469870)
chr7 (62-252)||(21861309-21861501)
chr7 (62-252)||(36277103-36277295)
chr7 (62-252)||(1596609-1596800)
chr7 (92-229)||(33834238-33834375)
chr7 (62-252)||(33996191-33996380)
chr7 (149-311)||(30727172-30727334)
chr7 (101-242)||(4886385-4886526)
chr7 (29-275)||(48417371-48417617)
chr7 (62-252)||(31485536-31485728)
chr7 (64-229)||(48661455-48661622)
chr7 (92-171)||(21821853-21821932)
chr7 (106-252)||(22574662-22574808)
chr7 (113-242)||(3519926-3520055)
chr7 (112-252)||(6001547-6001687)
chr7 (184-260)||(47849695-47849771)
chr7 (166-297)||(3519793-3519923)
chr7 (41-172)||(26239872-26240006)
chr7 (106-252)||(31892212-31892359)
chr7 (62-146)||(34027408-34027494)
chr7 (113-311)||(2404228-2404424)
chr7 (183-229)||(32292657-32292703)
chr7 (62-136)||(2544440-2544516)
chr7 (93-146)||(10882222-10882275)
chr7 (87-172)||(28080706-28080791)
chr7 (62-130)||(43688159-43688228)
chr7 (92-136)||(40121917-40121961)
chr7 (92-146)||(40746312-40746366)
chr7 (96-226)||(44874481-44874611)
chr7 (62-136)||(31257260-31257336)
chr7 (40-130)||(48243060-48243152)
chr7 (312-344)||(2962509-2962541)
chr7 (62-131)||(21054951-21055022)
chr7 (92-172)||(36993265-36993345)
chr7 (192-252)||(40746145-40746204)
chr7 (249-297)||(48417583-48417631)
chr7 (62-130)||(1000564-1000634)
chr7 (157-252)||(2315138-2315233)
chr7 (312-343)||(9608624-9608655)
chr7 (312-343)||(9836196-9836227)
chr7 (98-136)||(4267909-4267947)
chr7 (92-146)||(17202226-17202280)
chr7 (183-252)||(14540853-14540922)
chr7 (62-128)||(29469855-29469923)
chr7 (182-239)||(44056625-44056682)
chr7 (62-131)||(3038082-3038153)
chr7 (92-136)||(6782908-6782952)
chr7 (312-344)||(11700215-11700247)
chr7 (312-344)||(13106776-13106808)
chr7 (312-344)||(21558178-21558210)
chr7 (312-344)||(26459404-26459436)
chr7 (185-229)||(36238138-36238182)
[»] chr3 (55 HSPs)
chr3 (62-311)||(4155339-4155589)
chr3 (92-260)||(13574789-13574958)
chr3 (62-252)||(16239606-16239799)
chr3 (62-297)||(35038262-35038497)
chr3 (62-252)||(20327726-20327918)
chr3 (123-267)||(22775496-22775641)
chr3 (101-267)||(50052638-50052800)
chr3 (157-252)||(34992718-34992813)
chr3 (92-229)||(20303285-20303422)
chr3 (26-229)||(49629585-49629790)
chr3 (62-172)||(54567907-54568019)
chr3 (149-229)||(31150948-31151028)
chr3 (62-146)||(1723059-1723145)
chr3 (92-252)||(31317275-31317438)
chr3 (127-229)||(46139344-46139446)
chr3 (39-166)||(54368508-54368637)
chr3 (62-146)||(11589800-11589886)
chr3 (106-229)||(34659137-34659259)
chr3 (62-210)||(45828034-45828184)
chr3 (37-136)||(22729090-22729191)
chr3 (62-132)||(20303061-20303133)
chr3 (165-297)||(21888525-21888657)
chr3 (113-172)||(39620160-39620220)
chr3 (83-146)||(8142630-8142693)
chr3 (192-247)||(30332392-30332447)
chr3 (92-181)||(12930075-12930165)
chr3 (178-252)||(39683380-39683454)
chr3 (62-145)||(45138955-45139040)
chr3 (62-140)||(23691413-23691493)
chr3 (92-136)||(17638281-17638325)
chr3 (186-242)||(49637328-49637384)
chr3 (62-130)||(472059-472129)
chr3 (157-252)||(20303176-20303271)
chr3 (193-240)||(23897700-23897747)
chr3 (92-131)||(24866244-24866283)
chr3 (62-146)||(27670376-27670461)
chr3 (62-130)||(35038193-35038263)
chr3 (87-145)||(1800067-1800125)
chr3 (113-218)||(11659592-11659698)
chr3 (41-136)||(39269325-39269422)
chr3 (187-229)||(52480098-52480140)
chr3 (62-124)||(20327619-20327683)
chr3 (183-252)||(22729631-22729700)
chr3 (62-140)||(23708213-23708293)
chr3 (62-140)||(23726669-23726749)
chr3 (62-140)||(23745125-23745205)
chr3 (62-140)||(24063650-24063730)
chr3 (92-145)||(33640092-33640145)
chr3 (62-128)||(39683268-39683336)
chr3 (62-131)||(8018983-8019054)
chr3 (92-136)||(16926942-16926986)
chr3 (130-242)||(19954339-19954451)
chr3 (96-136)||(21833399-21833439)
chr3 (92-128)||(47702410-47702446)
chr3 (92-128)||(50052540-50052576)
[»] chr1 (71 HSPs)
chr1 (62-312)||(35772044-35772295)
chr1 (92-312)||(2859445-2859664)
chr1 (62-311)||(39348173-39348421)
chr1 (62-297)||(4112839-4113075)
chr1 (62-252)||(26176923-26177115)
chr1 (63-252)||(25145597-25145788)
chr1 (92-252)||(38668172-38668332)
chr1 (62-226)||(4098306-4098471)
chr1 (83-229)||(33156771-33156918)
chr1 (92-210)||(30369882-30370000)
chr1 (106-258)||(12376544-12376696)
chr1 (92-311)||(27413394-27413612)
chr1 (184-256)||(8223420-8223492)
chr1 (92-252)||(51460319-51460479)
chr1 (159-258)||(12325403-12325501)
chr1 (161-255)||(17208670-17208764)
chr1 (54-252)||(16162940-16163139)
chr1 (87-252)||(38733193-38733354)
chr1 (89-252)||(35892100-35892263)
chr1 (126-297)||(52961428-52961598)
chr1 (33-166)||(11234202-11234338)
chr1 (41-130)||(20208527-20208616)
chr1 (37-131)||(35772254-35772350)
chr1 (192-297)||(52676341-52676446)
chr1 (62-167)||(17452790-17452897)
chr1 (157-297)||(25713270-25713409)
chr1 (96-172)||(51460007-51460083)
chr1 (121-252)||(4112652-4112783)
chr1 (183-297)||(11524900-11525013)
chr1 (183-297)||(11525115-11525228)
chr1 (162-252)||(34264598-34264688)
chr1 (186-247)||(36332543-36332602)
chr1 (64-131)||(7653493-7653562)
chr1 (192-260)||(11234335-11234404)
chr1 (188-252)||(369775-369839)
chr1 (92-208)||(5109297-5109413)
chr1 (92-136)||(29266000-29266044)
chr1 (186-241)||(36332446-36332499)
chr1 (247-306)||(11234182-11234241)
chr1 (62-130)||(26177158-26177228)
chr1 (62-130)||(40079167-40079237)
chr1 (195-250)||(40189099-40189154)
chr1 (92-210)||(25255358-25255475)
chr1 (92-146)||(51589853-51589907)
chr1 (62-136)||(3169781-3169857)
chr1 (62-128)||(17452680-17452748)
chr1 (92-172)||(8870867-8870947)
chr1 (63-131)||(25145483-25145553)
chr1 (62-130)||(41035826-41035896)
chr1 (38-130)||(31181512-31181606)
chr1 (92-130)||(42586438-42586476)
chr1 (92-130)||(51459704-51459742)
chr1 (212-257)||(10090848-10090893)
chr1 (26-145)||(11524976-11525097)
chr1 (66-132)||(31432227-31432295)
chr1 (96-205)||(31496295-31496404)
chr1 (62-136)||(51589007-51589083)
chr1 (62-136)||(51589241-51589317)
chr1 (312-344)||(1247163-1247195)
chr1 (312-344)||(2799912-2799944)
chr1 (312-344)||(3265974-3266006)
chr1 (62-132)||(3477173-3477245)
chr1 (62-131)||(4098161-4098232)
chr1 (92-140)||(5572672-5572720)
chr1 (192-252)||(8870801-8870861)
chr1 (121-220)||(9146772-9146872)
chr1 (87-131)||(33157263-33157307)
chr1 (312-344)||(33700767-33700799)
chr1 (162-235)||(34600760-34600835)
chr1 (39-140)||(40316039-40316142)
chr1 (92-128)||(51590085-51590121)
[»] scaffold0692 (1 HSPs)
scaffold0692 (62-250)||(5633-5823)
[»] scaffold0048 (1 HSPs)
scaffold0048 (87-252)||(81884-82048)
[»] scaffold0047 (1 HSPs)
scaffold0047 (64-252)||(12664-12853)
[»] scaffold0129 (1 HSPs)
scaffold0129 (92-226)||(14350-14484)
[»] scaffold0092 (1 HSPs)
scaffold0092 (92-252)||(5702-5862)
[»] scaffold0400 (1 HSPs)
scaffold0400 (92-203)||(3892-4003)
[»] scaffold0365 (1 HSPs)
scaffold0365 (92-203)||(4536-4647)
[»] scaffold0003 (2 HSPs)
scaffold0003 (157-231)||(87707-87781)
scaffold0003 (163-210)||(102296-102343)
[»] scaffold0366 (2 HSPs)
scaffold0366 (183-252)||(14543-14612)
scaffold0366 (183-252)||(10877-10946)
[»] scaffold0045 (1 HSPs)
scaffold0045 (92-172)||(41163-41243)
[»] scaffold0005 (1 HSPs)
scaffold0005 (92-146)||(56506-56560)
[»] scaffold0459 (1 HSPs)
scaffold0459 (183-252)||(13236-13305)
[»] scaffold0766 (1 HSPs)
scaffold0766 (62-126)||(6289-6355)
[»] scaffold0238 (1 HSPs)
scaffold0238 (312-344)||(2705-2737)
[»] scaffold0180 (1 HSPs)
scaffold0180 (312-344)||(19956-19988)


Alignment Details
Target: chr4 (Bit Score: 319; Significance: 1e-180; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 6666765 - 6666420
Alignment:
Q  1 ctattaggccgcccaccatttatatcacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctca--aatcggatttgtgg 98  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||    
T  6666765 ctatcaggccgcccaccatttatatcacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcacaaaccggttttgtgg 6666666  T
Q  99 gattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccac 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6666665 gattgttttaggcccaaccacgatttctaagatggtattagaacctctacaagatctgttgggccacctgctataaggattcttctatcgggtcacccac 6666566  T
Q  199 catttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataat 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6666565 catttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataat 6666466  T
Q  299 tggagacaatccttcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6666465 tggagacaatccttcctcctcaagatctcaggttcgattctctctg 6666420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 40717510 - 40717318
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||||||  |||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||  || |||  |||    
T  40717510 aagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaatatccattg 40717411  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||| || ||| |||  |||||||  |||||||||||||| ||||   |||||||| ||||||||| | |||||||| |||||||||    
T  40717410 ggccacctgccatcaggtttccgctatcggaccacccaccatttatgtccacaaaccaagcctaatagtgctggtcgtgagggggtgtgttaa 40717318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 62 - 311
Target Start/End: Complemental strand, 22231377 - 22231127
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||  || |||  |||    
T  22231377 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaaaatccattg 22231278  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    ||||||||||||| ||| |||  |||||||| |||| ||||||||| |||| | ||||||||||||||||||   | ||||||  |||||| ||||||||    
T  22231277 ggccacctgctatcaggtttccgctatcgggccacctaccatttatgtccacgaaccaagcccaatagtgctcatcatgaggggatgtgtt-aagagtcc 22231179  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
      ||| || | ||| |||||||||  | |||||||||| ||| |||||||||    
T  22231178 tacatcggataggatatggcctgacaatgtgtttataagtggggacaatcct 22231127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 108 - 311
Target Start/End: Complemental strand, 28245782 - 28245580
Alignment:
Q  108 aggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatat 207  Q
    ||||||||||||||||||||| ||||||| ||| |||||  ||||||  |||||||||||||||| ||| |||  |||||||| |||||||||||||| |    
T  28245782 aggcccaaccacgatttctaatatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgctatcgggccacccaccatttatgt 28245683  T
Q  208 ccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaa 307  Q
    ||| | |||||||||||||||||| | ||||| || ||||||| ||||||| | ||| || | || ||||||||||  | |||||||||| ||| | |||    
T  28245682 ccacgaaccaagcccaatagtgctggtcgtgatggggtgtgtt-aagagtctcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaa 28245584  T
Q  308 tcct 311  Q
    ||||    
T  28245583 tcct 28245580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 296
Target Start/End: Complemental strand, 25324126 - 25323867
Alignment:
Q  38 gagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggta 135  Q
    ||||||| | ||||||||||||  |||||||||||||  | |||||| |  |||  |||||||| |||| |   || |||||| ||||||||| ||||||    
T  25324126 gagatggccagaacaagtgtttataagtgggggcaattatcacctcacaagtcgattttgtggggttgtgtagcgcacaaccatgatttctaatatggta 25324027  T
Q  136 ttagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggc 235  Q
      ||| |||||  ||||||||||||||||||| || | ||| |||  | ||||| |||||||||||||||||||| |||||||||||||| ||| | |||    
T  25324026 gcagagcctctccaagatctgttgggccacctactcttaggtttccaccatcggatcacccaccatttatatccacgcaccaagcccaatggtgttgggc 25323927  T
Q  236 gtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttata 296  Q
     |||||| | ||||||||||| ||| ||| ||||| |||||| |||||| |||||||||||    
T  25323926 atgaggg-gggtgttaaagagccccacatcggttgagagatgacctgaacaagtgtttata 25323867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 62 - 311
Target Start/End: Original strand, 35788674 - 35788924
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgtt 158  Q
    |||||||||||||||| |||||| |   ||| ||| |||| |||| ||||||||||||||||||||||||||||||| ||| |||| |  |||||| |||    
T  35788674 aagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatccgtt 35788773  T
Q  159 gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||||||||||||| ||| |||   |||| || |||||||||||||| |||| | |||||||||||||||||| | |||||||| | ||||| |||||||    
T  35788774 gggccacctgctatcaggtttccgttatcaggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggg-gggtgtt-aagagtc 35788871  T
Q  259 ccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    || ||| || | | | |||||||||  | |||||||||| ||| | |||||||    
T  35788872 ccacatcggatagaacatggcctgacaatgtgtttataagtgggggcaatcct 35788924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 35797046 - 35796854
Alignment:
Q  62 aagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||||  || | | |||||||| |||| ||| ||||||| || |||||||||||||||| ||| |||||   |||||  |||    
T  35797046 aagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaagcccaactaccatttctaagatggtatcagagcctcttcgagatccattg 35796947  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    | | ||||||||| ||| |||  |||||||| |||||||||||||| |||| | |||||||||||||||||| | |||||||| |||||||||    
T  35796946 gactacctgctatcaggtttccgctatcgggccacccaccatttatctccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 35796854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 35819165 - 35819026
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||| | |||| ||||||||||||||||||| |||||||| || |||  ||||  ||||||  |||||||||||||||| ||| |||  |||||||||    
T  35819165 tttgtgaggttgtgttaggcccaaccacgatttttaagatggcatcagagtctctctaagatccattgggccacctgctatcaggtttccgctatcgggt 35819066  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgct 231  Q
    |||||||||||||| |||| | ||||||||||||||||||    
T  35819065 cacccaccatttatgtccacgaaccaagcccaatagtgct 35819026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 50543636 - 50543442
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatc--tgt 157  Q
    |||||||||||||||| |||||| |   ||| |||||||  |||| ||||||||||||||||||||||||||| ||| ||| |||||  ||||||  | |    
T  50543636 aagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatgatatcagagcctctccaagatccatat 50543537  T
Q  158 tgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    | | ||||||||||| ||| |||   ||||||| |||||||||||||| |||| | |||||||||||||||| | | |||||||| |||||||||    
T  50543536 ttgaccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgttaa 50543442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 297
Target Start/End: Complemental strand, 7572680 - 7572539
Alignment:
Q  156 gttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaaga 255  Q
    ||||| |||||| |||| ||| |||  |||| ||| ||||||||||||||||||||||||||||||   ||  | | |||||||||| ||||||||||||    
T  7572680 gttggaccaccttctatcaggtttccgctattgggccacccaccatttatatccatgcaccaagccttttaccgttgggcgtgagggggtgtgttaaaga 7572581  T
Q  256 gtcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    ||||  |||| |||| ||||||||||||| ||||||||||||    
T  7572580 gtcctacattagttgagagatggcctgaacaagtgtttataa 7572539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 253
Target Start/End: Original strand, 52559582 - 52559777
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgtt 158  Q
    |||||||||||||| | |||||| |   ||| |||||||| |||| ||||||||||||| |||||||||||| |||| ||| |||| |  |||||| |||    
T  52559582 aagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatagtatcagagcctcctcaaagatccgtt 52559681  T
Q  159 -gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaa 253  Q
     |||||||||||||| | | || |  ||||||| |||||||||||||| |||| | |||||||||||||||||| |  ||||||| ||||||||||    
T  52559682 tgggccacctgctatcaagtttatgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgttaaa 52559777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 6218219 - 6218411
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||| | |||||| |   ||| |||||||  |||| |||| | |||||||||||||||||||||||| ||| |||||  ||||||  |||    
T  6218219 aagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagatggtatcagagcctctccaagatccattg 6218318  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |  ||||| |||| ||| |||  ||||| ||||||||| ||||||| | || | |||||||||||||||||| | |||||||| |||||||||    
T  6218319 gatcacctactatcaggtttccgctatcaggtcacccatcatttatgtacaagaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 6218411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 260
Target Start/End: Original strand, 7926320 - 7926537
Alignment:
Q  39 agatggtctgaacaagtgttttcaagtgggggcaatccttac--ctcaaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||| ||||||| ||||||  ||||||||||| |||| ||  | |||  ||| ||||||||  ||| ||||||||||||| |||||| ||||||||||    
T  7926320 agatggcctgaacatgtgtttataagtgggggcattcctcacaacacaagccggttttgtggggctgtgttaggcccaaccaagatttcgaagatggtat 7926419  T
Q  137 tagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcg 236  Q
     ||| |||||  ||||||  |||||||||||||||| ||| |||  |||| ||| |||||| |      ||||| | ||||||||||||| || ||| ||    
T  7926420 cagagcctctccaagatccattgggccacctgctatcaggtttccactatagggccacccatc------atccacgaaccaagcccaataatggtagtcg 7926513  T
Q  237 tgagggtgtgtgttaaagagtccc 260  Q
    |||||| |||||||||||||||||    
T  7926514 tgagggggtgtgttaaagagtccc 7926537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 25324241 - 25324139
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagag 256  Q
    |||||||||||||||| | | |||  |||||||| ||||||||||||||||| | |||||||||||||||||  | || ||||||| |||||||||||||    
T  25324241 ttgggccacctgctatcaagtttccgctatcgggccacccaccatttatatctacgcaccaagcccaatagtattgggtgtgagggggtgtgttaaagag 25324142  T
Q  257 tcc 259  Q
    |||    
T  25324141 tcc 25324139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 92 - 258
Target Start/End: Original strand, 8902674 - 8902838
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgttgggccacctgctataaggattcttctatcggg 190  Q
    |||||||| || | ||||| |||||||||||| ||| |||||||| ||| | | ||  ||||||| |||||||||||| ||| ||| ||  |||||| ||    
T  8902674 tttgtggggttatgttaggtccaaccacgattgctaggatggtatcagagcattctctaagatctattgggccacctgttatcaggttt--tctatcagg 8902771  T
Q  191 tcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||  |||||||||||||||||||||||| | ||||||| |  ||||||||| |||||||||||||||    
T  8902772 tcaatcaccatttatatccatgcaccaag-ctaatagtgttgagcgtgagggggtgtgttaaagagtc 8902838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 11036815 - 11036623
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggatt-tgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| || | |||| |||||| |||| ||||||| |||||| |||| ||||||||||| ||| || ||  ||||||  |||    
T  11036815 aagtgggggcaatcctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaatttttaagatggtatcagagccactctaagatccattg 11036716  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||| |||| ||| |||  ||||| || ||||||||||| || |||||| ||||||| ||||| |||  | ||||||||  ||||||||    
T  11036715 ggccacctactattaggtttccgctatcaggccacccaccattaatgtccatgaaccaagctcaatattgcaggtcgtgaggggttgtgttaa 11036623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 8902980 - 8903086
Alignment:
Q  149 aagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtg 248  Q
    ||||||| |||||||||||| ||| ||| ||  |||||| ||||| ||||||||||||||||||||||||| | ||||||| |  ||||||||| |||||    
T  8902980 aagatctattgggccacctgttatcaggttt--tctatcaggtcaaccaccatttatatccatgcaccaag-ctaatagtgttgagcgtgagggggtgtg 8903076  T
Q  249 ttaaagagtc 258  Q
    ||||||||||    
T  8903077 ttaaagagtc 8903086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 36686178 - 36686021
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    ||||||||||||| ||| ||||||||| ||||| |||||| |||| ||| |||||  |||||    ||||||||||||||| ||| |||  ||||||||     
T  36686178 tttgtgggattgtgttatgcccaaccatgatttttaagatagtataagagcctcttcaagattcaatgggccacctgctatcaggtttccgctatcgggc 36686079  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||||  | |||    ||||| ||||||||| | ||||||||||||||||||    
T  36686078 cacccaccatttatgcctatg---aaagcctaatagtgctggtcgtgagggtgtgtgttaa 36686021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 53814998 - 53814853
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |  |||| |||||||| |||| ||| ||||||||||||||||||| ||||||| ||| |||||  | |||   |||    
T  53814998 aagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcctcttcacgattctttg 53814899  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    ||||||||| ||| ||| ||||  |||||||||||||  |||||||    
T  53814898 ggccacctgttatcaggtttctgttatcgggtcacccgtcatttat 53814853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 4645689 - 4645844
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    ||||||||||||| |||| | |||||| ||||| |||||| |||| ||| |||||  ||||||  ||||| |||||||||| ||| |||  ||||||||     
T  4645689 tttgtgggattgtgttagactcaaccatgatttataagatagtatcagagcctctcaaagatccattgggtcacctgctatcaggtttccgctatcgggc 4645788  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgt 247  Q
    ||||||||| |||| |||| | | ||||||||| |||| | | |||||||| ||||    
T  4645789 cacccaccaattatgtccacgaatcaagcccaaaagtgttggtcgtgagggggtgt 4645844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 4905759 - 4905660
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    |||||| |||||| ||||||||||||| ||| ||| |||||  ||| ||  |||||||||||||||| ||| |||| |||||||| ||||||||||||||    
T  4905759 ttaggctcaaccatgatttctaagatgatatcagagcctctccaagctccattgggccacctgctattaggtttctgctatcgggccacccaccatttat 4905660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 5398682 - 5398587
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||||| ||| |||  |||||||  |||||||||||||| |||| | |||||||| ||||||||| | |||||||| |||||||||    
T  5398682 ttgggccacctgctatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagccaaatagtgctggtcgtgagggggtgtgttaa 5398587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 30530185 - 30530034
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    |||||| ||||||| |||||||||||||||| ||| |||||  ||||||  || ||||||||||||| ||  |||  |||||| ||||||||||||  ||    
T  30530185 ttaggctcaaccacaatttctaagatggtatcagagcctctccaagatccattaggccacctgctatcagatttccgctatcgcgtcacccaccatcgat 30530086  T
Q  206 atccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagt 257  Q
        ||| ||||||| |||||||| | |  ||||||||||||||||||||||    
T  30530085 gcttatgaaccaagctcaatagtgatggttgtgagggtgtgtgttaaagagt 30530034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 35609595 - 35609489
Alignment:
Q  26 cacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatt 123  Q
    |||||||| |||||||||| || |||||||||||  |||||||||||||||| ||||  ||| |||| |||||||| |||| | |  |||||||||||||    
T  35609595 cacattggatgggagatggcctaaacaagtgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgtaacacccaaccacgatt 35609496  T
Q  124 tctaaga 130  Q
    |||||||    
T  35609495 tctaaga 35609489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 311
Target Start/End: Complemental strand, 27634315 - 27634135
Alignment:
Q  130 atggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    ||||||| ||| |||||  ||||||  |||| |||| |||||| ||| |||| |||||||  |||||||  ||||| |||| | ||||||||||||||||    
T  27634315 atggtatcagagcctctccaagatccattggaccacttgctatcaggtttctgctatcggaccacccactgtttatgtccacgaaccaagcccaatagtg 27634216  T
Q  230 ctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    || | |||||||| | ||||| ||||||||| ||| || | ||| |||||||||  | |||||||||| ||| | |||||||    
T  27634215 ctggtcgtgagggggggtgtt-aagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcct 27634135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 18528523 - 18528374
Alignment:
Q  65 tgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacc----tctag---aagatct 155  Q
    ||||||||||||| ||||||  |||||| |||||| |||| | |||| |||||||||||||||||||||||||| ||| ||    || ||   |||||||    
T  18528523 tgggggcaatcctcacctcacaaatcggttttgtgagattttgttagacccaaccacgatttctaagatggtatcagagcctccttcaagaccaagatct 18528424  T
Q  156 gttgggccacctgctataaggattcttctatcgggtcacccaccatttata 206  Q
    ||||||||||||| ||| ||| |||  ||||| || |||||||||||||||    
T  18528423 gttgggccacctgttatcaggcttccgctatc-ggccacccaccatttata 18528374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 40716683 - 40716544
Alignment:
Q  69 ggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgttgggccac 165  Q
    ||||||||||||||  |||  |||||||||||| |||| ||||||||||||| | ||||||||||||||| ||| |||| |  | |||| ||||||||||    
T  40716683 ggcaatccttaccttacaagccggatttgtggggttgtgttaggcccaaccatggtttctaagatggtatcagagcctcatccacgatccgttgggccac 40716584  T
Q  166 ctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    ||||||| ||| |||   ||||||| |||||  |||||||    
T  40716583 ctgctatcaggtttccgttatcgggccacccgtcatttat 40716544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 50870631 - 50870548
Alignment:
Q  213 caccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    |||||||||  |||||||| ||| |||||| |||||||||||||| || ||||||| | ||||||||||||| ||||||||||||    
T  50870631 caccaagccggatagtgctgggcatgagggggtgtgttaaagagt-ccacattggtcgagagatggcctgaacaagtgtttataa 50870548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 266
Target Start/End: Original strand, 32002338 - 32002542
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||| | ||||  |||||||| |||||| | |||| |||| ||||| ||| |||| ||||||||||| |||||||||  ||||||| ||     
T  32002338 aagtgggggcaatcttcaccttacaaatcggttttgtgaggttgtattagacccaaacacaatttttaagatggtatcagaacctctccaagatctatt- 32002436  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    || || ||||||| ||| |||  |||||| ||||| |||||| ||| |||||  || |||||||||||   | | ||| |||  ||||||||||||||||    
T  32002437 ggtcatctgctatcaggtttccgctatcgagtcacgcaccatctatgtccat-aactaagcccaataggattggtcgtaaggaggtgtgttaaagagtcc 32002535  T
Q  260 cgcattg 266  Q
    | |||||    
T  32002536 cacattg 32002542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 12869332 - 12869187
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||| ||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||||||| |||  ||||  | ||| | |||    
T  12869332 aagtggggacaatcctcacctcataagacggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctcttcacgattttttg 12869233  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    | ||||||| ||| ||| |||   |||||||||||||  |||||||    
T  12869232 gcccacctgttatcaggtttccgttatcgggtcacccgtcatttat 12869187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 20726783 - 20726737
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  20726783 ctatcgggccacccaccatttatatccacgcaccaagcccaatagtg 20726737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 21646524 - 21646379
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    ||||||||||||||||||| |||||||||||||||  ||||  |||||   ||||| |||||||||| | | ||   |||||||  || |||||||||||    
T  21646524 ttaggcccaaccacgatttttaagatggtattagagtctctccaagattcattgggtcacctgctatcatgttttcactatcggacca-ccaccatttat 21646426  T
Q  206 atccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
     |||||| |||||| ||||||||| | | ||||||||| ||| ||||    
T  21646425 gtccatgaaccaagtccaatagtgttggtcgtgagggtatgtattaa 21646379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 190
Target Start/End: Complemental strand, 34358067 - 34357969
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcggg 190  Q
    |||||||| |||| |||||| ||| |||||||||||||||| ||| ||| |||||| ||||||| ||||||||| || ||| ||| |||  ||||||||    
T  34358067 tttgtggggttgtgttaggctcaaacacgatttctaagatgatatcagagcctctacaagatctattgggccacttgttatcaggtttccgctatcggg 34357969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 35609620 - 35609544
Alignment:
Q  234 gcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    ||||||||| ||||||||| ||||||| |||||| ||||||||||||| || |||||||||||| ||| | |||||||    
T  35609620 gcgtgagggggtgtgttaa-gagtcccacattggatgggagatggcctaaacaagtgtttataagtgggggcaatcct 35609544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 50870585 - 50870480
Alignment:
Q  26 cacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaatcgga-tttgtgggattgttttaggcccaaccacgattt 124  Q
    ||||||||| | ||||||| ||||||||||||||  ||||||||||| |||| |||||  | | || |||||||| |||| ||||| |||||||| ||||    
T  50870585 cacattggtcgagagatggcctgaacaagtgtttataagtgggggcagtcctcacctcttagccgattttgtggggttgtgttaggtccaaccacaattt 50870486  T
Q  125 ctaaga 130  Q
    ||||||    
T  50870485 ctaaga 50870480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 17111610 - 17111654
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  17111610 tttgtggggttgtgttaggcccaaccacgatttctaagatggtat 17111654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 53828592 - 53828516
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggattt-gtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||||||||| |||||| || | ||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  53828592 aagtgggggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaagatggtat 53828516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 9685413 - 9685499
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| ||||||| |||||| |  |||| |||||| | |||| ||||||||||||||||||||||| ||||||| ||| |||||    
T  9685413 aagtggggccaatcctcacctcacaagtcggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 9685499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 260
Target Start/End: Complemental strand, 24513428 - 24513232
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgttg 159  Q
    |||||||||||||||| |||||| || | | ||||| || |||| |||||||||| |||||||||||| ||| ||| ||| ||| ||  ||||||| |||    
T  24513428 aagtgggggcaatcctcacctcacaagccggtttgtagggttgtgttaggcccaatcacgatttctaacatgatatcagagcctcctctaagatctattg 24513329  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    | ||| ||||||| ||  |||  ||||| ||||||||||||| |||    | | ||||| |||||||| ||||| ||| || | |||||||||||| |||    
T  24513328 gaccatctgctatcagacttccgctatcaggtcacccaccatctat----aggaaccaaacccaatagggctagtcgtaagagggtgtgttaaagaatcc 24513233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 267
Target Start/End: Original strand, 31944970 - 31945144
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||||||||  |||||||||  || |||||||| |||  || |||  ||||  ||||||| |||  |||| |||||| ||| |||| |||||||      
T  31944970 tttgtgggattgtgataggcccaaatacaatttctaaaatgacatcagagtctctccaagatctattga-ccacatgctattaggtttctgctatcggac 31945068  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattgg 267  Q
    |||| ||||||||| || |   ||||| |||||||| ||||| ||||||| |||||||||||||||| | ||||||    
T  31945069 cacctaccatttatgtctacaaaccaaacccaatagggctagtcgtgaggatgtgtgttaaagagtctcacattgg 31945144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 14783224 - 14783170
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||| ||| |||||    
T  14783224 tttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 14783170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 1518179 - 1518255
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||||||||| | |||| |   ||| |||||||| |||| ||||||| |||||||||||||||||||||||    
T  1518179 aagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtat 1518255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 20821988 - 20822056
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    ||||||||||||| || |||||| |   ||| ||||||||||||| |||||||||||||||||||||||    
T  20821988 aagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 20822056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 21498369 - 21498445
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||||||||| |||||| |   ||| |||||||| || | ||||||||||||||||||||||| |||||||    
T  21498369 aagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaatatggtat 21498445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 21498810 - 21498878
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||    
T  21498810 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 21498878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 22445494 - 22445635
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctat 186  Q
    |||| |||||||| |||| |||| ||||||||| | |||||||||||||| ||| |||||  ||||||  ||| ||||||| |||| ||||||   ||||    
T  22445494 tcggttttgtggggttgtgttagacccaaccacaaattctaagatggtatcagagcctcttcaagatccattgagccacctactattaggattacactat 22445593  T
Q  187 cgggtcacccaccatttatatccatgcaccaagcccaatagt 228  Q
    |||   ||||||| ||||| |||| | ||||| | |||||||    
T  22445594 cggactacccaccgtttatgtccacgaaccaaactcaatagt 22445635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 35609816 - 35609704
Alignment:
Q  26 cacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatt 123  Q
    |||||||| ||| |||||   |||||||||||||  |||||||| ||||||| |||||| |   ||| |||||||| |||| | || |||||||| ||||    
T  35609816 cacattggatggtagatgccttgaacaagtgtttataagtggggccaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccatgatt 35609717  T
Q  124 tctaagatggtat 136  Q
    |||||||||||||    
T  35609716 tctaagatggtat 35609704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 40726736 - 40726808
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatg 132  Q
    ||||||||| |||||| |||||| |   ||| ||||| ||||||| |||||||||||||||||||||||||||    
T  40726736 aagtgggggaaatcctcacctcacaagccggttttgtaggattgtgttaggcccaaccacgatttctaagatg 40726808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 50543399 - 50543327
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatg 132  Q
    |||||||||||||||| ||| || |   ||| |||||||| |||| |||||||||||||||||||||||||||    
T  50543399 aagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatg 50543327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 1333614 - 1333508
Alignment:
Q  26 cacattggttgggagatggtctgaacaagtgttttcaagtgggg--gcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacga 121  Q
    |||||| |||| ||||||| ||||||||||||||  ||||||||  ||| |||| ||||  ||| |||| ||||| || |||| |||| |||||||||||    
T  1333614 cacatttgttgagagatggcctgaacaagtgtttgtaagtgggggagcagtcctcacctcacaagtcggttttgtagggttgtattagacccaaccacga 1333515  T
Q  122 tttctaa 128  Q
    |||||||    
T  1333514 tttctaa 1333508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 5846124 - 5846247
Alignment:
Q  25 tcacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgat 122  Q
    |||||| |||| |||| ||||||||  |  |||||  |||||||||||||||| |||||| |   ||| |||||||| |||  |||||| ||||||||||    
T  5846124 tcacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgcgttaggctcaaccacgat 5846223  T
Q  123 ttctaagatggtattagaacctct 146  Q
    |||||| ||||||| | |||||||    
T  5846224 ttctaatatggtatcaaaacctct 5846247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 22827528 - 22827623
Alignment:
Q  37 ggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||| ||||  | ||||||  |||||||||||||||| |||||| |   ||| ||||| || |||| |||||||||||||||||||||||||    
T  22827528 ggagatggcctgacaacgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 25052899 - 25052943
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| ||||||||||||||||||||||| |||||||    
T  25052899 tttgtggggttgtgttaggcccaaccacgatttctaacatggtat 25052943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 52827470 - 52827418
Alignment:
Q  84 aaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    ||||||| |||||| | |||| ||||||||||||| |||||||||||||||||    
T  52827470 aaatcggctttgtgaggttgtgttaggcccaaccatgatttctaagatggtat 52827418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 53814711 - 53814675
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    ||||||||||||| |||||||||||||||||||||||    
T  53814711 tttgtgggattgtgttaggcccaaccacgatttctaa 53814675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 311
Target Start/End: Complemental strand, 6666348 - 6666254
Alignment:
Q  216 caagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    |||||| | ||||||||| |||||||| || ||| |||||| |||  |||| |||||||||  |||||| |||||||||||||||| | |||||||    
T  6666348 caagcctagtagtgctag-cgtgagggggtctgtcaaagagccccatattgcttgggagataccctgaataagtgtttataattgggggcaatcct 6666254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 22845516 - 22845446
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||||| |||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  22845516 aagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 22863489 - 22863559
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| ||| || |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  22863489 aagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 299
Target Start/End: Original strand, 28501560 - 28501607
Alignment:
Q  252 aagagtcccgcattggttgggagatggcctgaagaagtgtttataatt 299  Q
    |||||||||||||||| || ||||| ||||||| ||||||||||||||    
T  28501560 aagagtcccgcattggatgagagattgcctgaacaagtgtttataatt 28501607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 35788909 - 35788979
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| | |||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  35788909 aagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 53559359 - 53559289
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| ||||  |||  ||  |||||||| |||| |||||||||||||||||||||||||    
T  53559359 aagtgggggcaatcctcaccttacaagccgattttgtggggttgtgttaggcccaaccacgatttctaaga 53559289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 7572820 - 7572770
Alignment:
Q  247 tgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    ||||||||| || |||||| |||| ||||||||||||| ||||||||||||    
T  7572820 tgttaaagaatcacgcattagttgagagatggcctgaacaagtgtttataa 7572770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 25669898 - 25669940
Alignment:
Q  200 atttatatccatgcaccaagcccaatagtgctaggcgtgaggg 242  Q
    |||||||| || |||||||||||||||||||| ||||||||||    
T  25669898 atttatatacacgcaccaagcccaatagtgctgggcgtgaggg 25669940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 39902632 - 39902562
Alignment:
Q  62 aagtgggggcaatccttacctca-aatc-ggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| || | || |||||||| |||| |||||||||||||| ||||||||||    
T  39902632 aagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccaccatttctaaga 39902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 50870733 - 50870683
Alignment:
Q  95 gtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc 145  Q
    ||||| |||| |||||| ||||||| |||||||||||||||| ||||||||    
T  50870733 gtggggttgtattaggctcaaccacaatttctaagatggtatcagaacctc 50870683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 2463821 - 2463889
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||||||||  |||  ||| |||||||| |||| ||||||||| |||| ||||||||    
T  2463821 aagtgggggcaatccttacctcacaagccggttttgtggggttgtgttaggcccagccaccatttctaa 2463889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 2516000 - 2516061
Alignment:
Q  84 aaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc 145  Q
    |||||||||||||||   ||| |||||||||||||||||| ||||||| |||| ||| ||||    
T  2516000 aaatcggatttgtggagatgtgttaggcccaaccacgattactaagatcgtatcagagcctc 2516061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 306
Target Start/End: Complemental strand, 4455716 - 4455604
Alignment:
Q  194 cccaccatttatatccatgcaccaagcccaatagtgctagg-cgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtt 292  Q
    |||| ||||||||| |||||||||| |||||||||| |||| |||||||  |||| || ||||||||   || ||||| ||| || |||||| |||||||    
T  4455716 cccatcatttatattcatgcaccaaacccaatagtg-taggacgtgaggaagtgttttcaagagtcctatatcggttgagaggtgacctgaacaagtgtt 4455618  T
Q  293 tataattggagaca 306  Q
    |||||  |||||||    
T  4455617 tataaacggagaca 4455604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 267
Target Start/End: Complemental strand, 5398408 - 5398309
Alignment:
Q  166 ctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcatt 265  Q
    ||||||| ||| |||  |||||||  |||||||||||||| |||| | ||||||||||||| || | | |||||||| ||||||| ||||||||| ||||    
T  5398408 ctgctatcaggtttcccctatcggaccacccaccatttatgtccacgaaccaagcccaataatgttggtcgtgaggg-gtgtgtt-aagagtcccacatt 5398311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 9685647 - 9685715
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||| |||||| |   ||| ||| |||| |||| |||||||||||||||||||||||    
T  9685647 aagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaa 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 12005619 - 12005574
Alignment:
Q  216 caagcccaatagtgctaggcgtgaggg-tgtgtgttaaagagtccc 260  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||    
T  12005619 caagcccaatagtgctggtcgtgaggggtgtgtgttaaagagtccc 12005574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 341
Target Start/End: Original strand, 12448758 - 12448787
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctct 341  Q
    ||||||||||||||||||||||||||||||    
T  12448758 tcctcctcaagatctcaggttcgattctct 12448787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 13637436 - 13637517
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacc-tctagaagatctgttgggccacctgctat 172  Q
    |||||||| |||| | || |||||||||||||||||| ||||||||||| || |||  |||||| ||||||| ||| |||||    
T  13637436 tttgtggggttgtctaagacccaaccacgatttctaaaatggtattagagccttctctaagatccgttgggctaccagctat 13637517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 16066080 - 16066148
Alignment:
Q  62 aagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||| ||||||  ||  || ||||| ||||||| |||||||||||||| ||||||||    
T  16066080 aagtgggggcaatcctcacctcacaaactggttttgtaggattgtgttaggcccaaccaccatttctaa 16066148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 28245595 - 28245527
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||| |||||||||||    
T  28245595 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaa 28245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 36685912 - 36685871
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatgg 133  Q
    |||||||| |||| |||| |||||||||||||||||||||||    
T  36685912 tttgtggggttgtattagacccaaccacgatttctaagatgg 36685871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 37836095 - 37836171
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    ||||||||||||||||  |||  |||  ||| |||||||| |||| ||||||| |||||| ||||||||||||||||    
T  37836095 aagtgggggcaatcctctccttacaagccggttttgtggggttgtgttaggcctaaccacaatttctaagatggtat 37836171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 41853522 - 41853623
Alignment:
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgt 291  Q
    |||||| |||||||||||  |||||||||||||||||| |  |||||| || |||||||  || ||| | |||| |||| |||||||| |||| | ||||    
T  41853522 cacccatcatttatatcctcgcaccaagcccaatagtgatgagcgtgatggagtgtgttttagggtctcacattagttgagagatggcatgaataggtgt 41853621  T
Q  292 tt 293  Q
    ||    
T  41853622 tt 41853623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 1215894 - 1215970
Alignment:
Q  184 tatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtccc 260  Q
    |||| ||| ||||||||||||| |||| | |||||| ||||||||| | | | | |||| |||||||||||||||||    
T  1215894 tatcaggttacccaccatttatgtccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccc 1215970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 7949480 - 7949448
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  7949480 tcctcctcaaggtctcaggttcgattctctctg 7949448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 37109377 - 37109345
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  37109377 tcctcctcaaggtctcaggttcgattctctctg 37109345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 54054842 - 54054806
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||| |||| |||||||||||||||||||||||    
T  54054842 tttgtggggttgtgttaggcccaaccacgatttctaa 54054806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 41 - 311
Target Start/End: Original strand, 1910 - 2181
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtatta 138  Q
    |||||||||  | ||||||  |||||||||||||||| ||||  |||  ||| |||||||| |||| |||||||||||||| |||||||||||||||| |    
T  1910 atggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 2009  T
Q  139 gaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtg 238  Q
    || |||||  ||||||  |||||||||||| ||| ||| |||  |||||| |||||||||||||||| |||| | |||||||||||||||||| | ||||    
T  2010 gagcctctccaagatccattgggccacctgttatcaggtttccgctatcgagtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtg 2109  T
Q  239 agggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    |||| ||||||| ||||||||| ||| ||   ||| |||||||||  | |||||||||| ||| | |||||||    
T  2110 agggggtgtgtt-aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 2166 - 2236
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| ||||  |||  ||| |||||||| |||| |||||||||||||| ||||||||||    
T  2166 aagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 5e-41; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 41 - 311
Target Start/End: Complemental strand, 11232519 - 11232248
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtatta 138  Q
    |||||||||  | ||||||  |||||||||||||||| ||||  |||  ||| |||||||| |||| |||||||||||||| |||||||||||||||| |    
T  11232519 atggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 11232420  T
Q  139 gaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtg 238  Q
    || |||||  ||||||  |||||||||||| ||| ||| |||  |||||| |||||||||||||||| |||| | |||||||||||||||||| | ||||    
T  11232419 gagcctctccaagatccattgggccacctgttatcaggtttccgctatcgagtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtg 11232320  T
Q  239 agggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    |||| ||||||| ||||||||| ||| ||   ||| |||||||||  | |||||||||| ||| | |||||||    
T  11232319 agggggtgtgtt-aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 11232248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 41790674 - 41790865
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||| ||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||    
T  41790674 aagtggggacaatcctcacctcataagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaagatccattg 41790772  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||| ||| |||  |||||| | |||||||||||||| |||||| ||||||||||| |||||| | |||||||| |||||||||    
T  41790773 ggccacctgctatcaggtttccgctatcgagccacccaccatttatgtccatgaaccaagcccaagagtgctggtcgtgagggggtgtgttaa 41790865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 39052998 - 39052776
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||| ||||||||||||||||||||||| |||||  ||||||  ||     
T  39052998 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaagatggtattagagcctctccaagatccattt 39052899  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    |||| |||||||| ||| |||  ||||| || |||||||||||||| |||| | |||||||||||||||| | | |||||||| ||||||| ||||||||    
T  39052898 ggccccctgctatcaggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgtt-aagagtcc 39052800  T
Q  260 cgcattggttgggagatggcctga 283  Q
    | ||| || | || ||||||||||    
T  39052799 cacatcggataggtgatggcctga 39052776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 20301276 - 20301468
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   | | |||||| | |||| ||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||    
T  20301276 aagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaagatccattg 20301375  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||| ||| |||  |||||||  |||||||||||||| || | | |||||||||||||||||| | |||||||| |||||||||    
T  20301376 ggccacctgctatcaggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 20301468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 21087908 - 21088100
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   | | |||||| | |||| ||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||    
T  21087908 aagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaagatccattg 21088007  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||| ||| |||  |||||||  |||||||||||||| || | | |||||||||||||||||| | |||||||| |||||||||    
T  21088008 ggccacctgctatcaggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 21088100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 8084142 - 8084334
Alignment:
Q  62 aagtgggggcaatccttacctca-aatc-ggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| || | || |||| ||  |||| |||| |||||||||||||||||||||||||| ||| |||||  ||||||  |||    
T  8084142 aagtgggggcaatcctcacctcacaagctggttttgcggagttgtgttagacccaaccacgatttctaagatggtatcagagcctctccaagatccattg 8084241  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||| |||||| ||| ||   |||| || ||||||||||||||| |||| | |||||||||||||||||| | |||||||| |||||||||    
T  8084242 ggccacatgctatcaggttttcgctattggatcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 8084334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 10615441 - 10615608
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| ||||| | |||||  |||||||||||||||| ||| |||||  ||||||  |||  ||||||| ||| ||| |||  |||||||||    
T  10615441 tttgtggggttgtgttaggtcaaaccataatttctaagatggtatcagagcctctccaagatccattgtaccacctgatatcaggtttccgctatcgggt 10615540  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    |||| || |||||| |||| | |||||| ||||||||||||| |||||||||||||||||||||||||    
T  10615541 caccaactatttatctccacgaaccaagtccaatagtgctagtcgtgagggtgtgtgttaaagagtcc 10615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 12688144 - 12688338
Alignment:
Q  117 cacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcacc 216  Q
    |||||||||||||||| ||||||| |||||  ||||||  |||||||||||||||| ||| ||||||||| ||| |||||||||||||| |||| | ||     
T  12688144 cacgatttctaagatgatattagagcctcttcaagatccattgggccacctgctatcaggtttcttctattgggccacccaccatttatgtccacgaact 12688243  T
Q  217 aagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcctt 312  Q
    ||||||||||||| | | | |||||| ||||| | ||||||||| |||||| | | ||||| |||||  | |||||||||| ||| | ||||||||    
T  12688244 aagcccaatagtgatggtcatgagggggtgtgat-aagagtcccacattggatagaagatgacctgacaatgtgtttataagtgggggcaatcctt 12688338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 26208282 - 26208110
Alignment:
Q  96 tgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgttgggccacctgctataaggattcttctatcgggtcac 194  Q
    |||| |||| ||||| ||| |||| |||||||||||||||| ||| ||| ||  |||||| ||||||||||||||||| ||| ||   ||| |||| |||    
T  26208282 tggggttgtgttaggtccatccacaatttctaagatggtatcagagccttctctaagatccgttgggccacctgctatcaggttttccctaacgggccac 26208183  T
Q  195 ccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattgg 267  Q
    ||||||||||||| ||||  ||||| | ||||||| |  |||||||||||||||||||||| |||| ||||||    
T  26208182 ccaccatttatattcatgtgccaagtctaatagtgttgtgcgtgagggtgtgtgttaaagattcccacattgg 26208110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 312
Target Start/End: Complemental strand, 20094861 - 20094613
Alignment:
Q  64 gtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttggg 161  Q
    |||||||||||||| ||||  |||  ||| |||||||| |||||| ||||||||||||||||| |||| |||||| |||   |||  ||||||  |||||    
T  20094861 gtgggggcaatcctcaccttacaagccggttttgtggggttgttt-aggcccaaccacgatttataagttggtatcagagtttcttcaagatccattggg 20094763  T
Q  162 ccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccg 261  Q
    |||||| |||| ||| ||   ||||| || |||||||||||||| |||| | |||||||||||||||||| | |||||||| | ||||| |||||||||     
T  20094762 ccacctcctatcaggttttcgctatcaggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggcgtgtt-aagagtccca 20094664  T
Q  262 cattggttgggagatggcctgaagaagtgtttataattggagacaatcctt 312  Q
    ||| |  | | |||||||||||  | |||||||||  ||| ||||||||||    
T  20094663 catcgaatagaagatggcctgacaatgtgtttatatgtggggacaatcctt 20094613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 3157596 - 3157436
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||| ||||||| |||| ||||||| ||| ||| |||||  || |||  |||| ||||||||||| ||| ||   ||||||||     
T  3157596 tttgtggggttgtgttaggctcaaccaccatttataagatgatatcagagcctctccaaaatccattggaccacctgctatcaggttttcgctatcggga 3157497  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||| |||| | |||||||||||||||||| | |||||| | |||||||||    
T  3157496 cacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagtgggtgtgttaa 3157436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 31197657 - 31197800
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctat 186  Q
    |||| ||||| || |||| ||||||||||||| ||||||||||||||||| ||| |||||   |||||  |||||||||||||||| ||| |||  ||||    
T  31197657 tcggttttgtagggttgtgttaggcccaacca-gatttctaagatggtatcagagcctctccgagatccattgggccacctgctatcaggtttccgctat 31197755  T
Q  187 cgggtcacccaccatttatatccatgcaccaagcccaatagtgct 231  Q
    |||  |||||||||||||| |||| | ||||||| ||||||||||    
T  31197756 cggaccacccaccatttatgtccacgaaccaagctcaatagtgct 31197800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 258
Target Start/End: Complemental strand, 37868674 - 37868455
Alignment:
Q  40 gatggtctgaacaagtgttttcaagtgggggcaatccttacctca-aatc-ggatttgtgggattgttttaggcccaaccacgatttctaagatggtatt 137  Q
    ||||| ||||||| ||||||   | ||||||||||||| |||||| || | || ||||||| ||||| ||||||| ||||||||||| |||||||||||     
T  37868674 gatggcctgaacatgtgtttattaatgggggcaatcctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgatttttaagatggtatc 37868575  T
Q  138 agaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgt 237  Q
    | | |||||  ||||||  |||||||||| ||||| | | |||  |||| ||| |||||||||||||| | || | ||||||||||||| |||| | |||    
T  37868574 atagcctctccaagatccattgggccacccgctatcaagtttccgctattgggccacccaccatttatgtacacgaaccaagcccaatattgctggtcgt 37868475  T
Q  238 gagggtgtgtgttaaagagtc 258  Q
    ||||| | |||||||||||||    
T  37868474 gaggg-gggtgttaaagagtc 37868455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 18004332 - 18004211
Alignment:
Q  126 taagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaat 225  Q
    ||||||||||| ||| |||||  ||||||  |||||||||||||||| ||| |||  |||||||| |||||||||||||| |||| | |||||||| |||    
T  18004332 taagatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcctaat 18004233  T
Q  226 agtgctaggcgtgagggtgtgt 247  Q
    |||||| | |||||||| ||||    
T  18004232 agtgctggtcgtgagggggtgt 18004211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 24532515 - 24532352
Alignment:
Q  37 ggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggt 134  Q
    |||||||| ||||  | ||||||  |||||||||||||| | |||||| |   ||| |||||||| |||| ||||||||||||| |||||||||||||||    
T  24532515 ggagatggcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggt 24532416  T
Q  135 attagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccac 198  Q
    || ||| || ||  ||||||  |||||||||||||||| ||| |||  |||||||| |||||||    
T  24532415 atcagagccccttcaagatccattgggccacctgctatcaggtttccgctatcgggccacccac 24532352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 3157216 - 3157121
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||| ||||||||||| ||| |||  |||||||| |||||||||||||| |||| | |||||||||||||||||| | |||||||| |||||||||    
T  3157216 ttggaccacctgctatcaggtttccgctatcgggacacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 3157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 12317040 - 12317137
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacctca-aatcggattt-gtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||  | ||||||  |||||||||||||||| |||||| || | ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  12317040 atggtctgacaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagatggtat 12317137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 8466695 - 8466556
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagag 256  Q
    |||||||||||||||| ||| |||  |||||  | |||||||||||||||| || |||||||||||||||||| | ||| ||| || |||| |||||||     
T  8466695 ttgggccacctgctatcaggtttccgctatcaagccacccaccatttatatgcacgcaccaagcccaatagtgatgggcatgaaggggtgt-ttaaagaa 8466597  T
Q  257 tcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    |||| ||| || |  ||||||| ||||| ||||||||||||    
T  8466596 tcccacatcggataagagatggtctgaacaagtgtttataa 8466556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 220
Target Start/End: Complemental strand, 15042955 - 15042793
Alignment:
Q  62 aagtgggggcaatccttacctc--aaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtat--tagaacctctagaagatctgt 157  Q
    ||||||||||||||||||||||  ||| ||| |||||||| |||| ||||||| ||||||||||||||||||| |||  |||   ||||  |||||   |    
T  15042955 aagtgggggcaatccttacctcgtaaaccggttttgtggggttgtgttaggcctaaccacgatttctaagatgttatcatagcctctctccaagattcat 15042856  T
Q  158 tgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagc 220  Q
    ||||||||||||||| ||| |||  ||||| || |||||||| ||||| |||| | |||||||    
T  15042855 tgggccacctgctatcaggtttccgctatcaggccacccaccgtttatgtccacgaaccaagc 15042793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 37868259 - 37868179
Alignment:
Q  178 ttcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||| |||| |||||||||||||||||| |||| |  ||||||||||||||| | | ||||||||||||||||||||||||    
T  37868259 ttctgctattgggtcacccaccatttatgtccacgagccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtc 37868179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 311
Target Start/End: Complemental strand, 39052741 - 39052591
Alignment:
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    ||||||||||||| ||| |||  ||||| || |||||||||||||| |||| | |||||||||||||||| | | |||||||| ||||||| ||||||||    
T  39052741 ggccacctgctatcaggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgtt-aagagtcc 39052643  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    | |||  | | || ||||||||||  | |||||||||| ||| | |||||||    
T  39052642 cacatcagataggtgatggcctgacaatgtgtttataagtgggggcaatcct 39052591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 165
Target Start/End: Complemental strand, 11232263 - 11232158
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||  |||  ||| |||||||| |||| |||||||||||||| |||||||||||||||| ||| |||||  ||||||  |||    
T  11232263 aagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattg 11232164  T
Q  160 ggccac 165  Q
    ||||||    
T  11232163 ggccac 11232158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 297
Target Start/End: Original strand, 38476085 - 38476293
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgttgggccacctgctataaggattctt----ctat 186  Q
    ||||||||||| | |||||||||||||| |||||||||||||||| ||| |||| |  ||||||  ||||||||| | |||| | |  | ||    |||     
T  38476085 tttgtgggattatgttaggcccaaccacaatttctaagatggtatcagagcctcctccaagatccattgggccacttactatcatgcatgtttccgctac 38476184  T
Q  187 cgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaaga 286  Q
    || | ||||||||||||||||||| ||||| |||||||| ||  | ||| |||||  ||||| | ||||||||| |||  |||| ||||||||||||| |    
T  38476185 cgagccacccaccatttatatccacgcacctagcccaatggttttgggcatgagg--gtgtggtgaagagtcccacatcagttgagagatggcctgaata 38476282  T
Q  287 agtgtttataa 297  Q
    |||||||||||    
T  38476283 agtgtttataa 38476293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 35682988 - 35682903
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgaggg 242  Q
    |||||||||||||||| ||| |||  |||||||| |||||||||||||| |||| | ||||||| |||||||||| | ||||||||    
T  35682988 ttgggccacctgctattaggtttccgctatcgggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgaggg 35682903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 5932221 - 5932061
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||||||||||| |||| ||||||||||| ||| |||||  ||||||  |||| |||||| |||| | | |||   |||||||     
T  5932221 tttgtggggttgtgttaggcccaaccaccatttttaagatggtatcagagcctctccaagatccattggaccacctactatcacgtttccgttatcgggc 5932122  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||| || |   ||||||| |||||||||| | |||||  | |||||||||    
T  5932121 cacccaccatttatgtcgacaaaccaagcgcaatagtgctggtcgtgaaagggtgtgttaa 5932061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 28213132 - 28213060
Alignment:
Q  101 ttgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgttgggccacctgctat 172  Q
    |||| ||||||||||||||||||||||| ||||||| ||| ||| ||  ||||||||||||||||||||||||    
T  28213132 ttgtgttaggcccaaccacgatttctaatatggtatcagatcctcctccaagatctgttgggccacctgctat 28213060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 38475726 - 38475841
Alignment:
Q  26 cacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatt 123  Q
    ||||| |||||  ||||||  |||||||||||||  |||||||||||||||| |||||| |   ||| ||||| || |||| |||||||||||||| | |    
T  38475726 cacatcggttgaaagatggcttgaacaagtgtttataagtgggggcaatcctcacctcacaagccggttttgtagggttgtgttaggcccaaccacaaat 38475825  T
Q  124 tctaagatggtattag 139  Q
    ||||||||||||||||    
T  38475826 tctaagatggtattag 38475841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 34842693 - 34842779
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||||||||| |||||| |  |||| |||||||| |||| |||||| |||||||||||||||| ||||||| ||| |||||    
T  34842693 aagtgggggcaatcctcacctcataggtcggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagagcctct 34842779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 37868014 - 37867939
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||| ||| |||||||||||||| |||| | |||||| ||||||||| | | ||||||||||||||||||||||||    
T  37868014 ctattgggccacccaccatttatgtccacgaaccaaggccaatagtgttggtcgtgagggtgtgtgttaaagagtc 37867939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 297
Target Start/End: Original strand, 39960074 - 39960207
Alignment:
Q  162 ccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccg 261  Q
    ||||||||||| ||| |||  |||||| |  ||||||||||||| |||| | |||||||||||||||||| | |||||||| | ||||| |||||||||     
T  39960074 ccacctgctatcaggtttccgctatcgagctacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggg-gggtgtt-aagagtccca 39960171  T
Q  262 cattggttgggagatggcctgaagaagtgtttataa 297  Q
    ||| || | |||||||||||||| |  |||||||||    
T  39960172 catcggataggagatggcctgaaaatttgtttataa 39960207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 19256889 - 19256803
Alignment:
Q  62 aagtgggggcaatccttacctca-aatc-ggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||||||||| |||||| || | || |||||||| |||| ||||||||||||||||||||||| ||||||| ||| |||||    
T  19256889 aagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 19256803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 311
Target Start/End: Complemental strand, 422490 - 422271
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgttgggccacctgctataaggattcttctatcggg 190  Q
    |||||||| |||| || ||||||||||| |||||||||||||||| ||| |||   | |||||| ||||||||||||||||| ||| |||  || |||||    
T  422490 tttgtggggttgtgtttggcccaaccacaatttctaagatggtatcagagcctaaaacaagatc-gttgggccacctgctatcaggtttccgctctcggg 422392  T
Q  191 tcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgag-ggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagt 289  Q
     |||||||||||| | |||| | ||||||  ||||| || | | | |||| || |||||||||| |||||| ||| || | |||||||| ||||  | ||    
T  422391 ccacccaccatttttgtccacgaaccaagttcaataatgttggtcatgagaggggtgtgttaaa-agtcccacatcggataggagatggtctgacaatgt 422293  T
Q  290 gtttataattggagacaatcct 311  Q
    ||||| || ||||| |||||||    
T  422292 gtttaaaagtggaggcaatcct 422271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 38475975 - 38476031
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtga 239  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||| | |||||||    
T  38475975 ctatcaggccacccaccatttatatccatgcaccaagtccaatagtgttgggcgtga 38476031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 7669535 - 7669625
Alignment:
Q  161 gccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||| ||| |||  |||||||  |||||||||||||| |||| | ||||||| | |||||||| | ||||||||||||||||||    
T  7669535 gccacctgctatcaggtttccactatcggaccacccaccatttatgtccacgaaccaagctc-atagtgctggtcgtgagggtgtgtgttaa 7669625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 17469833 - 17469919
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||| |||||||||||||||| ||||||| ||| |||||    
T  17469833 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagagcctct 17469919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 27204979 - 27205049
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  27204979 aagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 27205077 - 27205147
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  27205077 aagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 27205175 - 27205245
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  27205175 aagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 35682850 - 35682780
Alignment:
Q  62 aagtgggggcaatccttacctc--aaatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||  ||  ||| |||||||| |||| |||||||||||||||||||||||||    
T  35682850 aagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 5590462 - 5590361
Alignment:
Q  37 ggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggt 134  Q
    |||||||||||||  | |||||| ||||||||||||||||| || ||| |   ||| |||||| | |||| |||||||||||||| |||||||| |||||    
T  5590462 ggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaaaatggt 5590363  T
Q  135 at 136  Q
    ||    
T  5590362 at 5590361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 37001243 - 37001386
Alignment:
Q  64 gtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct---agaagatctgtt 158  Q
    |||||||||||||| |||||| |   ||| |||||||  |||| |||||||||||||||||||| |||||||||| ||| |||||     ||||||  ||    
T  37001243 gtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatcagagcctcttcatcaagatccatt 37001342  T
Q  159 gggccacctgctataaggattcttctatcgggtcacccaccatt 202  Q
    |||||||||||| | ||| |||  |||||||| |||||| ||||    
T  37001343 gggccacctgctgtcaggtttccgctatcgggccacccatcatt 37001386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 7729890 - 7729971
Alignment:
Q  230 ctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    ||||||||||||||||||||||||||||||| |||  | |  ||||||||||||  | |||||||||| ||| | |||||||    
T  7729890 ctaggcgtgagggtgtgtgttaaagagtcccacatcagatatgagatggcctgaccatgtgtttataagtgggggcaatcct 7729971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 10884084 - 10884155
Alignment:
Q  66 gggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  10884084 gggggcaatcctcacctcacaagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtat 10884155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 19256655 - 19256587
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||    
T  19256655 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 24075375 - 24075307
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||    
T  24075375 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24075307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 5675915 - 5675867
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgct 231  Q
    ||||||||||||||||||||||| |||| | |||||| |||||||||||    
T  5675915 ctatcgggtcacccaccatttatgtccacgaaccaagtccaatagtgct 5675867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 8849335 - 8849395
Alignment:
Q  198 ccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    ||||||||||| ||| ||||| |||||||||| | | |||||||| |||||||||||||||    
T  8849335 ccatttatatctatgaaccaaacccaatagtgttggtcgtgagggggtgtgttaaagagtc 8849395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 29005989 - 29006068
Alignment:
Q  178 ttcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||| |||||||| |||||||||||||| ||||||  | ||||||||||||||| | ||||| || |||| ||||||||||    
T  29005989 ttctactatcgggccacccaccatttatgtccatgagcgaagcccaatagtgctggtcgtga-ggagtgtattaaagagtc 29006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 31079598 - 31079478
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    ||||||||||  | ||||||||||||||||| | |||||||| ||||||  |||| |||| || ||| ||  |||  |||||||| ||||||||||||||    
T  31079598 ttaggcccaataaagatttctaagatggtatcaaaacctctacaagatccattggaccacatgttatcagatttccactatcgggccacccaccatttat 31079499  T
Q  206 atccatgcaccaagcccaata 226  Q
     |  | | |||||||||||||    
T  31079498 gtgaacgaaccaagcccaata 31079478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 31079744 - 31079616
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctg 282  Q
    |||||||| || ||| ||||||| |||| | |||||||||||||| | | | |||||||  ||||||||||||||||| ||| || |   | ||||| ||    
T  31079744 ctatcgggccatccatcatttatgtccacgaaccaagcccaatagggatggtcgtgaggaggtgtgttaaagagtcccacatcgggtaaaatatggcttg 31079645  T
Q  283 aagaagtgtttataattggagacaatcct 311  Q
    || | |||||||||| ||||| |||||||    
T  31079644 aacatgtgtttataagtggaggcaatcct 31079616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 38475872 - 38475928
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtga 239  Q
    ||||| || ||||||||||||||||||| |||||||| ||||||||| | |||||||    
T  38475872 ctatcaggccacccaccatttatatccacgcaccaagtccaatagtgttgggcgtga 38475928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 42049779 - 42049644
Alignment:
Q  39 agatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||| ||| ||| ||||||  |||||||||||||||| ||| || |   ||| |||||| | ||||  |||||| |||||||||||||||||||| ||    
T  42049779 agatggcctggacatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtgaggttgtggtaggcctaaccacgatttctaagatggcat 42049680  T
Q  137 tagaacct-ctagaagatctgttgggccacctgcta 171  Q
     ||||||| ||  |||||| |||||||| |||||||    
T  42049679 cagaacctcctcaaagatccgttgggccgcctgcta 42049644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 44931296 - 44931236
Alignment:
Q  251 aaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    |||||||||| ||| ||||| ||||||||||||| |||||||||||| ||| | |||||||    
T  44931296 aaagagtcccacatcggttgagagatggcctgaataagtgtttataagtgggggcaatcct 44931236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 4828083 - 4828169
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| ||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||| ||||| ||||||| ||| |||||    
T  4828083 aagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaatatggtatcagagcctct 4828169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 37001511 - 37001550
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  37001511 tttgtggggttgtgttaggcccaaccacgatttctaagat 37001550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 39960211 - 39960277
Alignment:
Q  66 gggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  39960211 gggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 8466581 - 8466535
Alignment:
Q  38 gagatggtctgaacaagtgttttcaagtgggggcaatccttacctca 84  Q
    ||||||||||||||||||||||  ||||||||| |||||| ||||||    
T  8466581 gagatggtctgaacaagtgtttataagtgggggaaatcctcacctca 8466535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 226
Target Start/End: Complemental strand, 10614976 - 10614842
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||| |||||||||||| ||||||| ||| | | |||||  ||||||  |||| |||||||| || | | || | |||||||      
T  10614976 tttgtggggttgtattaggctcaaccacgatttataagatgatatcatagcctctccaagatccattggaccacctgcaatcaagtttttgctatcggaa 10614877  T
Q  192 cacccaccatttatatccatgcaccaagcccaata 226  Q
    || ||||||||| | |||| | |||||||||||||    
T  10614876 catccaccatttgtgtccacgaaccaagcccaata 10614842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 25325693 - 25325731
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  25325693 tttgtggagttgttttaggcccaaccacgatttctaaga 25325731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 42846642 - 42846604
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  42846642 tttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 3157391 - 3157326
Alignment:
Q  66 gggggcaatccttacctca-aatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||| |||||| || | | |||||||| |||| |||||||||||||| ||||||||||    
T  3157391 gggggcaatcctcacctcacaagctgttttgtggggttgtgttaggcccaaccaccatttctaaga 3157326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 5589921 - 5589852
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||| |||||||| |||||| |||| | ||||||||||||| |||||| |||||  | |||||||||    
T  5589921 ctatcggatcacccacaatttatgtccacgaaccaagcccaataatgctagtcgtgaacgggtgtgttaa 5589852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 10615687 - 10615732
Alignment:
Q  101 ttgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||| |||||| |||||||| ||||||||||| |||||||||||||    
T  10615687 ttgtattaggctcaaccacggtttctaagatgatattagaacctct 10615732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 17477080 - 17477148
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||| ||||||||||||||||    
T  17477080 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 26800581 - 26800501
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattaga 140  Q
    |||||||||||||||| ||| || |   ||| |||||||| |||| |||||||||||||| |||||||  |||||||||||    
T  26800581 aagtgggggcaatcctcaccacacaagccggttttgtggggttgtgttaggcccaaccacaatttctattatggtattaga 26800501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 4828308 - 4828375
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttcta 127  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||| |||||||    
T  4828308 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 4828375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 4873714 - 4873602
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    |||||||||||||| |||||| ||||| ||| | | ||| |  || || |||||||||| ||||||| ||| |||   ||| || |||||||||||||||    
T  4873714 ttaggcccaaccacaatttctcagatgttatcaaagcctttccaaaatttgttgggccagctgctatcaggtttccgttattggatcacccaccatttat 4873615  T
Q  206 atccatgcaccaa 218  Q
     ||||||| ||||    
T  4873614 gtccatgctccaa 4873602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 18004165 - 18004094
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||||||||||| ||| || |  |||| |||||| | |||| ||||||||||||| ||||||||||||    
T  18004165 aagtgggggcaatcctcaccccataagtcggttttgtgaggttgtgttaggcccaaccaagatttctaagat 18004094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 33017264 - 33017296
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  33017264 tcctcctcaaggtctcaggttcgattctctctg 33017296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 34653197 - 34653233
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||| |||| |||||||||||||||||||||||    
T  34653197 tttgtggggttgtgttaggcccaaccacgatttctaa 34653233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 35690090 - 35690058
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  35690090 tcctcctcaaggtctcaggttcgattctctctg 35690058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 39743576 - 39743612
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||| |||| |||||||||||||||||||||||    
T  39743576 tttgtggggttgtgttaggcccaaccacgatttctaa 39743612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 343
Target Start/End: Complemental strand, 43594345 - 43594313
Alignment:
Q  311 ttcctcctcaagatctcaggttcgattctctct 343  Q
    |||||||||||| ||||||||||||||||||||    
T  43594345 ttcctcctcaaggtctcaggttcgattctctct 43594313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 5e-41; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 62 - 311
Target Start/End: Complemental strand, 41667062 - 41666811
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgtt 158  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||| |  |||||| |||    
T  41667062 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatccgtt 41666963  T
Q  159 gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||||||||||||| ||| |||   ||||||| |||||||||||||| |||| | |||||||||||||||||| | |||||||| ||||||| |||||||    
T  41666962 gggccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtc 41666864  T
Q  259 ccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    || ||| ||   ||| |||||||||  | |||||||||| ||| | |||||||    
T  41666863 ccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 41666811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 106 - 311
Target Start/End: Complemental strand, 95524 - 95320
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    ||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||||||||||||||| ||| |||  | |||||| ||||||||||||||    
T  95524 ttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgccatcgggccacccaccatttat 95425  T
Q  206 atccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagac 305  Q
     |||| | |||||||||||||||||| | |||||||| ||||||| ||||||| | ||| || | || |||| |||||  | |||||||||| ||| |||    
T  95424 gtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcacacatcggataggtgatgacctgacaatgtgtttataagtggggac 95326  T
Q  306 aatcct 311  Q
    ||||||    
T  95325 aatcct 95320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 252
Target Start/End: Original strand, 15480315 - 15480529
Alignment:
Q  40 gatggtctgaacaagtgttttcaagtgggggcaatccttacctca-aatc-ggatttgtgggattgttttaggcccaaccacgatttctaagatggtatt 137  Q
    ||||||||||  | ||||||  |||||||||||||||| |||||| || | || |||||||| || | |||||||||||||||||||||||||||||||     
T  15480315 gatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagatggtatc 15480414  T
Q  138 agaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgt 237  Q
    ||| |||||  ||||||  |||||||||||||||| ||| |||  |||| ||| |||||||||||||| |||||| |||||||| ||| ||||| | |||    
T  15480415 agagcctcttcaagatccattgggccacctgctatcaggtttccgctattgggccacccaccatttatgtccatgaaccaagcctaatcgtgctggtcgt 15480514  T
Q  238 gagggtgtgtgttaa 252  Q
    ||||  |||||||||    
T  15480515 gaggaggtgtgttaa 15480529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 297
Target Start/End: Complemental strand, 24346774 - 24346569
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgttgggccacctgctataaggattcttctatcggg 190  Q
    |||||||| |||| |||| |||||||||||||| ||||||||||| ||| |||| |  ||||||  |||||||||||||||| ||| |||   |||||||    
T  24346774 tttgtggggttgtgttagacccaaccacgatttttaagatggtatcagagcctcctccaagatccattgggccacctgctatcaggtttccgttatcggg 24346675  T
Q  191 tcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtg 290  Q
     |||||||||||||| |||| | ||||||| |||||||||| | |||||||| ||||||| ||||||||| ||| || | ||| |||||||||  | |||    
T  24346674 ccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggataggacatggcctgacaatgtg 24346576  T
Q  291 tttataa 297  Q
    |||||||    
T  24346575 tttataa 24346569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 92 - 297
Target Start/End: Complemental strand, 18333736 - 18333533
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||||||||||||| |||||||||||||| ||| |||||  ||||||  | |||||||||||||| ||| ||   ||||||||     
T  18333736 tttgtggggttgtgttaggcccaaccacgaattctaagatggtatcagagcctcttcaagatccatcgggccacctgctatcaggttttcgctatcgggc 18333637  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgt 291  Q
    |||||||||||||| |||| | |||||||||| ||||||| | |||||||| ||||||| |||| |||| ||| || | |||||||| ||||  | ||||    
T  18333636 cacccaccatttatgtccacgaaccaagcccattagtgctggtcgtgaggg-gtgtgtt-aagaatcccacatcggataggagatggtctgacaatgtgt 18333539  T
Q  292 ttataa 297  Q
    ||||||    
T  18333538 ttataa 18333533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 87 - 252
Target Start/End: Complemental strand, 32908994 - 32908830
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctat 186  Q
    |||| |||||||| |||| |||| | ||||||| |||||||||||| ||||||| |||||  ||||||  |||||||| ||||||| ||| |||| ||||    
T  32908994 tcggttttgtggggttgtgttagactcaaccacaatttctaagatgatattagagcctcttcaagatccattgggccatctgctatcaggtttctgctat 32908895  T
Q  187 cgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||||||||| || | | ||||| |||||||||||| | |||||||| |||||||||    
T  32908894 cgggtcacccaccatttatgtcaacgaaccaaacccaatagtgctggtcgtgaggg-gtgtgttaa 32908830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 24531614 - 24531806
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggattt-gtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| || | ||||| ||||| |||| ||| ||||||||||||||||||||||||||| ||| |||||  | ||||  |||    
T  24531614 aagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagatggtatcagagcctctctatgatccattg 24531713  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||| ||  ||||  |||||   |||||| ||||||| |||| | |||||||||||||||||| | |||||||| |||||||||    
T  24531714 ggccacctgctatcagttttctgttatcgaaccacccaacatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 24531806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 62 - 297
Target Start/End: Original strand, 9368610 - 9368846
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||| ||||||||| |||||| |   ||| |||||||| |||| |||||||||||||  ||||||||| |||||| ||| |||||  ||||||  |||    
T  9368610 aagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaaggtggtatcagagcctcttcaagatccattg 9368709  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    ||||||||||||| ||| |||  |||| ||  |||||||||| ||| |||| | ||||| |||||||||||| | |||||||| |||| || ||||||||    
T  9368710 ggccacctgctatcaggtttccgctattggaccacccaccatgtatgtccacgaaccaaacccaatagtgctggtcgtgagggggtgtctt-aagagtcc 9368808  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    | ||| || | ||||||||| |||  | ||||||||||    
T  9368809 cacatcggataggagatggcatgacaatgtgtttataa 9368846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 24270123 - 24269938
Alignment:
Q  112 ccaaccacgatttctaagatggtattagaacctc-tagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatcca 210  Q
    ||||||||||||| ||||||||||| ||| |||| |  ||||||  |||||||||||||||| ||| |||   ||||||| |||||||||||||| ||||    
T  24270123 ccaaccacgatttttaagatggtatcagagcctcctccaagatccattgggccacctgctatcaggtttccgttatcgggccacccaccatttatgtcca 24270024  T
Q  211 tgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
     | ||||||| |||||||||| | |||||||| ||||||| ||||||||| ||| || | ||| |||||||||  | ||||||||||    
T  24270023 cgaaccaagctcaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggataggacatggcctgacaatgtgtttataa 24269938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 26137382 - 26137221
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgttgggccacctgctataaggattcttctatcggg 190  Q
    ||||||||||| | |||||||||||||||||||||||| |||||| ||| ||| ||  ||||| |||||||||||||||||| ||| ||   | ||||||    
T  26137382 tttgtgggattatgttaggcccaaccacgatttctaaggtggtatcagagcctactccaagatttgttgggccacctgctatcaggttttcaccatcggg 26137283  T
Q  191 tcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
     |||||| ||||||| |||| | |||||| |||||| |||||| |||||||| |||| ||||    
T  26137282 ccacccatcatttatgtccacgaaccaagtccaataatgctagtcgtgagggggtgtattaa 26137221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 63 - 252
Target Start/End: Complemental strand, 25258369 - 25258178
Alignment:
Q  63 agtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgg 160  Q
    ||||||||||||||| |||||| |  |||| |||||||| |||| |||  | |||||||||||||||||||||||| ||| | |||  ||||||  ||||    
T  25258369 agtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttctccaagatccattgg 25258270  T
Q  161 gccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||| ||| |||  |||||||  ||||||| |||||| |||| | |||||||| |||| |||| | | |||||| |||||||||    
T  25258269 gccacctgctatcaggtttccgctatcggaccacccacaatttatgtccacgaaccaagccaaataatgctggtcatgagggggtgtgttaa 25258178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 63 - 252
Target Start/End: Complemental strand, 25322159 - 25321968
Alignment:
Q  63 agtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgg 160  Q
    ||||||||||||||| |||||| |  |||| |||||||| |||| |||  | |||||||||||||||||||||||| ||| | |||  ||||||  ||||    
T  25322159 agtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttctccaagatccattgg 25322060  T
Q  161 gccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||| ||| |||  |||||||  ||||||| |||||| |||| | |||||||| |||| |||| | | |||||| |||||||||    
T  25322059 gccacctgctatcaggtttccgctatcggaccacccacaatttatgtccacgaaccaagccaaataatgctggtcatgagggggtgtgttaa 25321968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 43117692 - 43117844
Alignment:
Q  90 gatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgg 189  Q
    |||||||||| |||| ||||||||||| |||||||||||||| |||| ||| ||| |  ||||||| |||||||||||||||| ||| |||  |||||||    
T  43117692 gatttgtggggttgtgttaggcccaacaacgatttctaagatagtatcagagcctttccaagatctattgggccacctgctatcaggtttccgctatcgg 43117791  T
Q  190 gtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgaggg 242  Q
      |||||| ||||||| |||| | ||||||| |||||||| | | ||||||||    
T  43117792 accacccatcatttatgtccacgaaccaagctcaatagtgttggtcgtgaggg 43117844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 252
Target Start/End: Original strand, 24528534 - 24528747
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtatta 138  Q
    |||||||||  | ||||||  |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||| ||||||||||||||||| |    
T  24528534 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatca 24528633  T
Q  139 gaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtg 238  Q
    || |||||  | ||||  |||| ||||||||||| ||  ||||  |||||   |||||| ||||||| |||| | |||||||| ||||||||| | | ||    
T  24528634 gagcctctccatgatccattggaccacctgctattagttttctattatcgaaccacccaacatttatgtccacgaaccaagcctaatagtgcttgtcatg 24528733  T
Q  239 agggtgtgtgttaa 252  Q
    |||| |||||||||    
T  24528734 agggggtgtgttaa 24528747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 8081321 - 8081182
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagag 256  Q
    |||||||||||||||| |||  ||  |||||||  |||||||||||||| |||| | |||||||||||||||||| | |||||||| ||||||| |||||    
T  8081321 ttgggccacctgctatcaggtatcccctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagag 8081223  T
Q  257 tcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    |||| ||| || | ||| |||||||||  | ||||||||||    
T  8081222 tcccacatcggataggacatggcctgacaatgtgtttataa 8081182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 2063823 - 2063717
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttac-ctcaaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattag 139  Q
    |||||||||  | ||||||  |||||||||||||||| || | ||| |||| |||||||| |||| ||||||||||||||||||||||||||||||| ||    
T  2063823 atggtctgacaatgtgtttataagtgggggcaatcctcactcacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcag 2063724  T
Q  140 aacctct 146  Q
    | |||||    
T  2063723 agcctct 2063717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 6919466 - 6919306
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||| | |||| |||||| |||||||||||| ||||||||||| | | |||||  ||||||  ||| | || ||||||| ||| |||  || ||||      
T  6919466 tttgtgaggttgtgttaggctcaaccacgatttttaagatggtatcaaagcctcttcaagatccattgagtcatctgctatcaggtttccgctttcggac 6919367  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||| |||||||||| |||| | |||||||||||||||||| | ||||| ||||||||||||    
T  6919366 cactcaccatttatgtccacgaaccaagcccaatagtgctggtcgtgatggtgtgtgttaa 6919306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 311
Target Start/End: Complemental strand, 17150501 - 17150287
Alignment:
Q  96 tgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacc 195  Q
    |||| |||| |||||| |||| ||||||| ||||||||||| ||| |||||  ||||||  ||||||||||| |||| ||| |||  |||||||| ||||    
T  17150501 tggggttgtgttaggctcaactacgatttttaagatggtatcagagcctcttcaagatccattgggccacctactatcaggtttccgctatcgggccacc 17150402  T
Q  196 caccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttat 295  Q
    |||||||||| ||||   |||||  ||||||||| |    ||||||| ||||||| |||||| |  ||| || | |||||||| ||||| | ||||||||    
T  17150401 caccatttatgtccagaaaccaataccaatagtgttgtttgtgagggggtgtgtt-aagagttcaacatcggataggagatggtctgaaaatgtgtttat 17150303  T
Q  296 aattggagacaatcct 311  Q
    || ||| | |||||||    
T  17150302 aagtgggggcaatcct 17150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 33337417 - 33337320
Alignment:
Q  185 atcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctga 283  Q
    |||||| |||||||||||||| |||| | |||||||||||||||||| | | |||||| ||||||| ||||||||| |||||| | || ||||||||||    
T  33337417 atcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcatgagggggtgtgtt-aagagtcccacattggataggtgatggcctga 33337320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 2716476 - 2716538
Alignment:
Q  185 atcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgt 247  Q
    |||||| ||||||||| |||||| |||||||||||||| |||||||| |||||||||| ||||    
T  2716476 atcgggccacccaccagttatatacatgcaccaagccccatagtgctgggcgtgagggggtgt 2716538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 17352691 - 17352546
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    ||||| |||||||| |||||||||||||||| ||| |||||  ||||||  ||| ||||| |||||| ||| |||  |||| |||||||| ||| |||||    
T  17352691 ttaggtccaaccaccatttctaagatggtatcagagcctcttcaagatc-cttgagccacttgctatcaggtttccgctattgggtcacctaccgtttat 17352593  T
Q  206 atccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
     |||| | ||||||||||||| |||| | ||| |||  |||||||||    
T  17352592 gtccacgaaccaagcccaataatgctggtcgtaaggaggtgtgttaa 17352546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 21209958 - 21209845
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| ||| ||||||||||||||||||| ||||||||||| |||||  | |||   |||||||||||| ||| ||| |||   ||||||||    
T  21209958 tttgtggggttgtgttaagcccaaccacgatttctaatatggtattagagcctcttcacgattctttgggccacctgttatcaggtttccgttatcgggt 21209859  T
Q  192 cacccaccatttat 205  Q
    |||||  |||||||    
T  21209858 cacccgtcatttat 21209845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 38731875 - 38731715
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcg-gg 190  Q
    |||||| | |||| |||||| ||||||| |||||||||||| ||| | | |||||  || ||   ||| || ||||||||| ||| |||| |||||  ||    
T  38731875 tttgtgaggttgtgttaggcacaaccaccatttctaagatgctatcatagcctcttcaaaattcattgagctacctgctatcaggtttctgctatcacgg 38731776  T
Q  191 tcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
     |||||| ||||||| |||||| |||||||||||||||||| | |||||||| |||||||||    
T  38731775 gcacccatcatttatgtccatgaaccaagcccaatagtgctggtcgtgaggg-gtgtgttaa 38731715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 13296907 - 13296978
Alignment:
Q  62 aagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||||||| ||| ||||||  || ||| ||||||||||||| |||| |||||||||||||||||||||    
T  13296907 aagtgggggcaaccctcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaagat 13296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 25258163 - 25258092
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||    
T  25258163 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 25321953 - 25321882
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||    
T  25321953 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 15590050 - 15590145
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||||| | | |||  ||||||||  || |||||||||| |||| | ||||| |||||||||||| | |||||||| |||||||||    
T  15590050 ttgggccacctgctatcaagtttccgctatcgggctactcaccatttatgtccacgaaccaaacccaatagtgctggtcgtgagggggtgtgttaa 15590145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 41666826 - 41666756
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  41666826 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 2986052 - 2985930
Alignment:
Q  89 ggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct-agaagatctgttgggccacctgctataaggattcttctatc 187  Q
    ||||||||||| |||| |||||| ||||||| |||||||||||||||| | |||||||   ||| ||| || ||| || | |||||||  |||  |||||    
T  2986052 ggatttgtggggttgtgttaggctcaaccaccatttctaagatggtatcaaaacctctgctaagttctattaggctacttcctataagatttccgctatc 2985953  T
Q  188 gggtcacccaccatttatatcca 210  Q
    ||| |||||||||||||| ||||    
T  2985952 gggccacccaccatttatgtcca 2985930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 19522103 - 19522188
Alignment:
Q  63 agtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    ||||||||||||||| |||||| |   ||| |||||||| |||| || | |||||||||||||||||| ||||||| |||||||||    
T  19522103 agtgggggcaatcctcacctcacaagccggttttgtggggttgtatttgacccaaccacgatttctaatatggtatcagaacctct 19522188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 6413675 - 6413566
Alignment:
Q  111 cccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatcca 210  Q
    |||||| ||||||||||| ||||||| | | |||||  ||||||  |||||||||||||||| |||  ||  |||||| | |||||||||||||| ||||    
T  6413675 cccaacaacgatttctaatatggtatcaaagcctcttcaagatccattgggccacctgctatcaggtatccactatcgagccacccaccatttatgtcca 6413576  T
Q  211 tgcaccaagc 220  Q
     | |||||||    
T  6413575 cgaaccaagc 6413566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 13296688 - 13296763
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||||||||| |||||| |   | | |||||||| |||| |||||||||||||||||||||||||||||||    
T  13296688 aagtgggggcaatcctcacctcacaagccagttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtat 13296763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 18885365 - 18885434
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||  |||||||||||||| || ||| |||||||||||||||||| | |||||| | |||||||||    
T  18885365 ctatcggaccacccaccatttatgtctatgaaccaagcccaatagtgctggtcgtgagagggtgtgttaa 18885434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 30770230 - 30770161
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||| |||||||||||||| |||| | |||||||||||||| ||| |  ||||||| |||||||||    
T  30770230 ctatcgggccacccaccatttatgtccacgaaccaagcccaatagcgctggttgtgagggggtgtgttaa 30770161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 344
Target Start/End: Original strand, 31074281 - 31074314
Alignment:
Q  311 ttcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||||||||||||||||||||||||||    
T  31074281 ttcctcctcaagatctcaggttcgattctctctg 31074314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 6415810 - 6415882
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaaga 255  Q
    ||||||||||| ||||| ||||| |||| | |||||||||||||||| | |  |||||| |||||||||||||    
T  6415810 ctatcgggtcatccaccgtttatgtccacgaaccaagcccaatagtgttggttgtgaggttgtgtgttaaaga 6415882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 8081150 - 8081106
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||    
T  8081150 tttgtggggttgtgttaggcccaaccatgatttctaagatggtat 8081106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 17423912 - 17423742
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgttgggccacctgctataaggattcttcta 185  Q
    |||| |||||||| || | |||| | ||||||||| |||||||||||||| | | |||| |  ||||||||||| ||||||||||||  || |||  |||    
T  17423912 tcggttttgtggggttatgttagcctcaaccacgacttctaagatggtatcaaagcctcttcaaagatctgttgagccacctgctatccggtttccgcta 17423813  T
Q  186 tcgggtcacccaccatttatatccatgcacc--aagcccaatagtgctaggcgtgagggtgtgtgttaaagagt 257  Q
    ||||   |||||||||||| |||||||| ||  | | ||   ||| ||||||||||||| ||||||||||||||    
T  17423812 tcggacaacccaccatttacatccatgctccagatgtcc---agtcctaggcgtgagggggtgtgttaaagagt 17423742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 20510885 - 20510754
Alignment:
Q  120 gatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaag 219  Q
    ||||| ||||||||||| ||| | |||  ||||||   ||||| ||||||||| ||| |||| |||| ||| ||||| |||||||| |||| | ||||||    
T  20510885 gatttttaagatggtatcagagcgtctccaagatccactgggctacctgctatcaggtttctgctattgggccaccc-ccatttatgtccacgaaccaag 20510787  T
Q  220 cccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||| |   |||||||| |||||||||    
T  20510786 cccaatagtgatgatcgtgagggggtgtgttaa 20510754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 21306902 - 21306973
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||||||||||| |||||| |   |||  |||||||||||| |||| |||||||||||||||||||||    
T  21306902 aagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21306973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 21314740 - 21314811
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||||||||||| |||||| |   |||  |||||||||||| |||| |||||||||||||||||||||    
T  21314740 aagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21314811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 24487751 - 24487628
Alignment:
Q  25 tcacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgat 122  Q
    |||||| |||| |||| ||||||||| |  |||||  ||||||||| |||||| |||||| |   ||| |||||| | |||| ||| |||||||||||||    
T  24487751 tcacatcggttaggagttggtctgaaaatatgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgat 24487652  T
Q  123 ttctaagatggtattagaacctct 146  Q
    |||||| ||||||| ||| |||||    
T  24487651 ttctaatatggtatcagagcctct 24487628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 37405075 - 37405162
Alignment:
Q  33 gttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaacca 118  Q
    |||| ||||||||||||| ||||||||  |||||||||||||||  ||||||||   ||| |||||||| |||| |||| ||||||||    
T  37405075 gttgagagatggtctgaaaaagtgtttgtaagtgggggcaatccccacctcaaaagccggttttgtggggttgtattagacccaacca 37405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 240
Target Start/End: Original strand, 395182 - 395217
Alignment:
Q  205 tatccatgcaccaagcccaatagtgctaggcgtgag 240  Q
    |||||| |||||||||||||||||||||||||||||    
T  395182 tatccacgcaccaagcccaatagtgctaggcgtgag 395217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 8098364 - 8098418
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| |||| ||| ||||||||||||||||||| ||||||| ||| |||||    
T  8098364 tttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcctct 8098418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 12034737 - 12034775
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  12034737 tttgtaggattgtgttaggcccaaccacgatttctaaga 12034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 16704736 - 16704618
Alignment:
Q  111 cccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatcca 210  Q
    |||||||| ||||||||| ||| ||| ||| | |||  || |||  |||||| ||||||||| | | |||  |||||||||||| || ||||||| ||||    
T  16704736 cccaaccatgatttctaaaatgatatcagagcttcttcaatatcctttgggctacctgctatcatgtttcagctatcgggtcactcatcatttatgtcca 16704637  T
Q  211 tgcaccaagcccaatagtg 229  Q
     | ||||||||||||||||    
T  16704636 cgaaccaagcccaatagtg 16704618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 28510138 - 28510176
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  28510138 tttgtggggttgtgttaggcccaaccacgatttctaaga 28510176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 31974355 - 31974443
Alignment:
Q  195 ccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaag 285  Q
    ||||||||||||||||  ||||||||||||||||| | || ||||||| |||||||| ||||   | ||||||||| || |||||||||||    
T  31974355 ccaccatttatatccacacaccaagcccaatagtgttgggtgtgaggg-gtgtgttacagag-gtcacattggttgagacatggcctgaag 31974443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 1028436 - 1028391
Alignment:
Q  91 atttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    ||||||||| |||| |||||||||||||| |||||||| |||||||    
T  1028436 atttgtggggttgtgttaggcccaaccaccatttctaacatggtat 1028391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 1564604 - 1564551
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc 145  Q
    |||||||| |||| |||||| |||||||||||||||||||| ||| ||| ||||    
T  1564604 tttgtggggttgtgttaggctcaaccacgatttctaagatgatatcagagcctc 1564551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 27133062 - 27132994
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    ||||| |||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||    
T  27133062 aagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27132994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 7369715 - 7369798
Alignment:
Q  38 gagatggtctgaacaagtgttttcaagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccac 119  Q
    |||||||  |||||||||||||  ||||||||||| |||| ||||  |||  ||| |||||||| |||| ||||||||||||||    
T  7369715 gagatggcatgaacaagtgtttataagtgggggcagtcctcacctcacaagccggttttgtggggttgtgttaggcccaaccac 7369798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 14285211 - 14285243
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  14285211 tcctcctcaaggtctcaggttcgattctctctg 14285243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 15480606 - 15480646
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatg 132  Q
    |||||||| |||| |||||||||||||| ||||||||||||    
T  15480606 tttgtggggttgtgttaggcccaaccacaatttctaagatg 15480646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 18333559 - 18333464
Alignment:
Q  37 ggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||  | ||||||  ||||||||| |||||| |||||| |   ||| |||||||| |||| |||||||||||||| | ||||||||    
T  18333559 ggagatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaaga 18333464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 25627107 - 25627139
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  25627107 tcctcctcaaggtctcaggttcgattctctctg 25627139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 42385089 - 42385053
Alignment:
Q  196 caccatttatatccatgcaccaagcccaatagtgcta 232  Q
    ||||||||||||||||||||||| || ||||||||||    
T  42385089 caccatttatatccatgcaccaatcctaatagtgcta 42385053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 43442246 - 43442278
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  43442246 tcctcctcaaggtctcaggttcgattctctctg 43442278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 5e-41; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 2029784 - 2029976
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||| ||||||||| |||||| |   ||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||    
T  2029784 aagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattg 2029883  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||| ||| |||  |||||||  |||||||||||||| |||| | |||||||||||||||||| | |||||||| |||||||||    
T  2029884 ggccacctgctattaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 2029976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 40379513 - 40379291
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||| |  ||||||  ||     
T  40379513 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctttccaagatccatta 40379414  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    ||||||||||||| ||| ||| ||||||||| ||||||||||||||||||| | ||||||||||| |||||| | |||||||  ||||||| ||||||||    
T  40379413 ggccacctgctatcaggtttcctctatcgggccacccaccatttatatccacgaaccaagcccaaaagtgctggtcgtgaggaggtgtgtt-aagagtcc 40379315  T
Q  260 cgcattggttgggagatggcctga 283  Q
    | ||| || | || ||||||||||    
T  40379314 cacatcggataggtgatggcctga 40379291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 267
Target Start/End: Complemental strand, 21383716 - 21383531
Alignment:
Q  83 caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgttgggccacctgctataaggattct 181  Q
    |||| ||| ||||||||||||  ||||||||||||||||||||||||||||||| ||| |||| |  |||||||||||||||||||||||| | | ||||    
T  21383716 caaaccggttttgtgggattgagttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatctgttgggccacctgctatcaagtttct 21383617  T
Q  182 tctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattgg 267  Q
     |||| ||||||||||| ||||||||||| |||||||||  ||||||| | |||||||| | |||||| ||||| |||| ||||||    
T  21383616 gctattgggtcacccacaatttatatccaggcaccaagcttaatagtggtgggcgtgagtgggtgtgtcaaagaatcccacattgg 21383531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 311
Target Start/End: Original strand, 16419314 - 16419532
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||||||||||||||| ||| |||  |||||| |     
T  16419314 tttgtggggttgtattaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgctatcgagc 16419413  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgt 291  Q
    |||||||||||||| |||| | ||||||| |||||||||| | |||||||| ||||||| ||||||||| ||| || | ||| |||| ||||  | ||||    
T  16419414 cacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggataggacatggtctgacaatgtgt 16419512  T
Q  292 ttataattggagacaatcct 311  Q
    |||||| ||| | |||||||    
T  16419513 ttataagtgggggcaatcct 16419532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 14466479 - 14466287
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    ||||||| |||||||| ||||  |||  ||| |||||||| |||| |||||||||||||| |||||||||||||||| ||| |||||  ||||||  |||    
T  14466479 aagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattg 14466380  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||| || ||| ||| |||  |||||||| |||||||||||||| |||| | |||||||||||||||||| | |||||||| |||||||||    
T  14466379 ggccacttgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 14466287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 62 - 311
Target Start/End: Complemental strand, 5711744 - 5711493
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgtt 158  Q
    |||||||||||||| | |||| |||   ||| |||||||| |||| |||||||||||||| ||||||||||| |||| ||| |||| |  |||||| |||    
T  5711744 aagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatagtatcagagcctcctccaagatccgtt 5711645  T
Q  159 gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    || ||||||||||| ||| |||   ||||||| |||||||||||||| |||| | |||||||||||||||||| | |||||||| ||||||| |||||||    
T  5711644 ggaccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtc 5711546  T
Q  259 ccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    || ||| ||   ||| |||||||||  | |||||||||| ||| | |||||||    
T  5711545 ccacatcggaaaggaaatggcctgacaatgtgtttataagtgggggcaatcct 5711493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 277
Target Start/End: Original strand, 13210517 - 13210758
Alignment:
Q  38 gagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggta 135  Q
    ||||||| |||||| | |||||  ||| | |||||||||| |||||| |  |||| |||||||| | || |||||||||||||| | |||||||||||||    
T  13210517 gagatggcctgaacgaatgtttataagagagggcaatcctcacctcacaggtcggttttgtggggtcgtgttaggcccaaccacaaattctaagatggta 13210616  T
Q  136 ttagaacctc-tagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctagg 234  Q
    | |||  ||| |  ||||||  ||||||||| |||||| ||  ||| |||||||||  |||||||||||| | |||  |||||||| |||||||| | ||    
T  13210617 tcagagactcctccaagatccattgggccacatgctatcagatttcctctatcgggcaacccaccatttacacccacacaccaagctcaatagtgtt-gg 13210715  T
Q  235 cgtgagggtgtgtgttaaagagtcccgcattggttgggagatg 277  Q
    |||||||| ||||||||||||||||| |||||| || ||||||    
T  13210716 cgtgagggggtgtgttaaagagtcccacattggatgagagatg 13210758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 101 - 247
Target Start/End: Complemental strand, 40149264 - 40149118
Alignment:
Q  101 ttgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccacca 200  Q
    |||| |||||||||||||| |||||||||||||||| ||| |||||  ||||||  ||||| |||||||||| ||  |||  |||||||  ||||||| |    
T  40149264 ttgtgttaggcccaaccacaatttctaagatggtatcagagcctcttcaagatccattgggtcacctgctatcagatttcagctatcggaccacccacta 40149165  T
Q  201 tttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgt 247  Q
    ||||| |||| | |||||||||||||||||| | |||||||||||||    
T  40149164 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggtgtgt 40149118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 93391 - 93252
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||| ||| |||||  ||||||  |||||||||||||||| ||  |||   |||||||     
T  93391 tttgtggggttgtgttaggcccaaccacgatttttaagatggtatcagagcctctccaagatccattgggccacctgctatcagctttccgttatcgggc 93292  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgct 231  Q
    ||||||||| |||| |||| | | ||||||||||||||||    
T  93291 cacccaccaattatgtccacgaatcaagcccaatagtgct 93252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 106 - 297
Target Start/End: Complemental strand, 33606312 - 33606122
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    |||||| |||||||||||||||||||| ||| | |  ||||  ||||||| ||||| ||| |||||| ||| |||  ||||| || ||||||||||||||    
T  33606312 ttaggcacaaccacgatttctaagatgatatcaaagtctcttcaagatctattgggtcacttgctatcaggtttccgctatcaggccacccaccatttat 33606213  T
Q  206 atccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
     |||| | |||||||| ||||||| | | |||||||  ||||||| ||||||||| ||| || | |||||||||||||| | ||||||||||    
T  33606212 gtccacgaaccaagcctaatagtgatggtcgtgaggtggtgtgtt-aagagtcccacatcggataggagatggcctgaaaatgtgtttataa 33606122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 311
Target Start/End: Complemental strand, 37812475 - 37812322
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagag 256  Q
    |||||||||||||||| ||| |||| |||||||| |||||||  ||||| |||| | ||||||||||||| |||| | |||||||| ||||||| |||||    
T  37812475 ttgggccacctgctatcaggtttctgctatcgggccacccactgtttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtgtt-aagag 37812377  T
Q  257 tcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    |||| ||| || | ||| |||||||||  | |||||||||| ||| |||||||||    
T  37812376 tcccacatcggataggacatggcctgacaatgtgtttataagtggggacaatcct 37812322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 87 - 252
Target Start/End: Complemental strand, 15124825 - 15124660
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctat 186  Q
    |||| |||||||| |||| |||| |||||||||||||||||||||||||| |||  ||||  ||||||  |||| ||||||||||| ||| ||    |||    
T  15124825 tcggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagtctctccaagatccattggaccacctgctatcaggttttcgttat 15124726  T
Q  187 cgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||| ||||||||||| |||| | |||||| ||||||||||| |  |||||||  ||||||||    
T  15124725 cgggtcatccaccatttatgtccacgaaccaagtccaatagtgctggttgtgaggggatgtgttaa 15124660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 264
Target Start/End: Complemental strand, 21383505 - 21383390
Alignment:
Q  149 aagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtg 248  Q
    |||||||||  ||||||||||||| ||| |||  |||| ||| ||||||  ||||||||||| ||||||||| |||||||| | || ||||||| |||||    
T  21383505 aagatctgtcaggccacctgctatcaggtttccgctattgggccacccattatttatatccacgcaccaagcacaatagtggtgggtgtgagggggtgtg 21383406  T
Q  249 ttaaagagtcccgcat 264  Q
    ||||||||||||||||    
T  21383405 ttaaagagtcccgcat 21383390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 24395883 - 24396040
Alignment:
Q  67 ggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggcca 164  Q
    ||||||||||| ||||||  |||||  |||||||| |||| ||||||| ||||||||||||||||| ||||| ||| |||||  ||||||  |||| |||    
T  24395883 ggggcaatcctcacctcacaaatcgattttgtggggttgtgttaggccaaaccacgatttctaagagggtatcagagcctcttcaagatccattggacca 24395982  T
Q  165 cctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagccc 222  Q
    |||||| | | | ||   |||||||  |||||||||||||| |||||| |||||||||    
T  24395983 cctgctctcatgttttcactatcggaccacccaccatttatgtccatgaaccaagccc 24396040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 16533378 - 16533519
Alignment:
Q  111 cccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatcca 210  Q
    |||||| |||| |||||| ||||||| ||| |||||  ||||||  |||||| ||||||||| ||| ||   |||||||| |||||||||||||| ||||    
T  16533378 cccaactacgacttctaaaatggtatcagagcctcttcaagatccattgggctacctgctatcaggttttcgctatcgggccacccaccatttatgtcca 16533477  T
Q  211 tgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
     | |||||| ||||||||||| | |||||| | |||||||||    
T  16533478 cgaaccaaggccaatagtgctggtcgtgagagggtgtgttaa 16533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 10523066 - 10523183
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgttgggccacctgctataaggattcttctatcggg 190  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||  ||| ||  ||||||||||||| |||||||||| | | |||   ||||| |    
T  10523066 tttgtgggattgtgttaggcccaaccacgatttctaaaatggtattag--cctcctccaagatctgttgggtcacctgctatcaagtttccgttatcgag 10523163  T
Q  191 tcacccaccatttatatcca 210  Q
     |||||||||||||| ||||    
T  10523164 ccacccaccatttatgtcca 10523183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 93664 - 93558
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||| |  ||||||  ||||| ||||| |||| ||| |||   |||||||     
T  93664 tttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagaacctttccaagatccattgggtcacctactatcaggtttccgttatcgggc 93565  T
Q  192 cacccac 198  Q
    |||||||    
T  93564 cacccac 93558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 253
Target Start/End: Complemental strand, 17525428 - 17525210
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgat------ttctaagatg 132  Q
    |||||||||  | ||||||  |||||||||||||||| |||||| |   ||| ||||||||||||| | ||||||||||||||       ||||||||||    
T  17525428 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgt-aggcccaaccacgagaatgaattctaagatg 17525330  T
Q  133 gtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgcta 232  Q
     ||| ||| |||||  || |||  |||||||||||||||| |||  ||  |||||||| |||||||||||||| |||| | |||||||||||||||| |     
T  17525329 atataagagcctcttcaa-atccattgggccacctgctatcaggtatccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgatg 17525231  T
Q  233 ggcgtgagggtgtgtgttaaa 253  Q
    | |||||| | ||||||||||    
T  17525230 gtcgtgagtgggtgtgttaaa 17525210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 36352228 - 36352038
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||| | ||||||||   ||| |||||||| |||| |||||  ||||||| |||| |||||||||||||||  ||||  ||||||  | |    
T  36352228 aagtgggggcaatcatcacctcaaaagccggttttgtggggttgtgttaggttcaaccacaatttttaagatggtattagagtctcttcaagatccatcg 36352129  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||| ||| ||| |||   ||||||| |||||||||||  |||||| | || ||||||||||||| | | ||||| || |||||||||    
T  36352128 ggccacctgttatcaggtttccgttatcgggccacccaccatt--tatccacgaacgaagcccaatagtgttggtcgtgatggggtgtgttaa 36352038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 258
Target Start/End: Complemental strand, 13250268 - 13250128
Alignment:
Q  118 acgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcacca 217  Q
    ||||||||||||||| ||||||| | | |  ||||||  ||||| |||||  ||||||| |||| |||| ||| |||||||||||||| |||| | | ||    
T  13250268 acgatttctaagatgatattagagcttttccaagatccattgggtcaccttttataaggtttctgctattggggcacccaccatttatgtccacgaagca 13250169  T
Q  218 agcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
     ||||||||||| | | ||||||||  ||||||||||||||    
T  13250168 tgcccaatagtgatggtcgtgaggggatgtgttaaagagtc 13250128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 17719581 - 17719651
Alignment:
Q  62 aagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| ||||||  || ||| |||||||| |||| |||||||||||||||||||||||||    
T  17719581 aagtgggggcaatcctgacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaga 17719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 19571059 - 19570973
Alignment:
Q  46 ctgaacaagtgttttcaagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||| ||||||  |||||||||||||||| |||||| |  |||  ||||||| ||||| |||||||||||||||||||||||||    
T  19571059 ctgaacatgtgtttataagtgggggcaatcctcacctcataagtcgattttgtggaattgtgttaggcccaaccacgatttctaaga 19570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 31700995 - 31700936
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccac 165  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||||||  |||||||||    
T  31700995 ttaggcccaaccacgatttctaagatggtattagagcctctccaagatccattgggccac 31700936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 878032 - 878077
Alignment:
Q  186 tcgggtcacccaccatttatatccatgcaccaagcccaatagtgct 231  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  878032 tcgggtcacccaccatttatatccacgcaccaagctcaatagtgct 878077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 2030019 - 2030091
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatg 132  Q
    |||||| ||||||||| |||||| |   ||| |||||||| ||||||||||||||||||||||||||||||||    
T  2030019 aagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatg 2030091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 18607216 - 18607123
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgtt 250  Q
    ||||||||| |||||| ||| |||   |||||||  ||||||||||||| || | | |||||||||||||||||||| |||| |||||||||||    
T  18607216 ttgggccacatgctatcaggtttccgttatcgggcaacccaccatttatgtctacgaaccaagcccaatagtgctagtcgtgtgggtgtgtgtt 18607123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 28407862 - 28407786
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||||||||| |||||| |   ||| |||||||  |||| |||||||||||||||||||||||||||||||    
T  28407862 aagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatggtat 28407786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 44404107 - 44404038
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||| | | ||||| || |||||||||    
T  44404107 ctatcgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgtgttaa 44404038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 16419496 - 16419587
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||  | ||||||  |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  16419496 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 17719415 - 17719574
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   ||| ||||| || |||| || ||||||||||| |||||||||||||||| | |  ||||  ||||||  ||     
T  17719415 aagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaagatggtatcaaagtctctccaagatccattt 17719514  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaag 219  Q
    ||||||||||||| ||| |||  ||||| || || ||||||||||| |||| | ||||||    
T  17719515 ggccacctgctatcaggtttcccctatccggccatccaccatttatgtccacgaaccaag 17719574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 2324255 - 2324341
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||| ||| ||||||| ||| |||||    
T  2324255 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagcctct 2324341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 5711508 - 5711438
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| ||||  |||  ||| |||||||| |||| |||||||||||||||||||||||||    
T  5711508 aagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 40379278 - 40379208
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  40379278 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 17854734 - 17854693
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  17854734 tcggttttgtgggattgtgttaggcccaaccacgatttctaa 17854693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 27897648 - 27897599
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||| |||||||| |||| |||||||||||||| ||||||||||||||||    
T  27897648 tcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtat 27897599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 41069261 - 41069326
Alignment:
Q  199 catttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcat 264  Q
    ||||||| |||| | ||||||| ||||||| || | |||||||| |||||||||||||||||||||    
T  41069261 catttatgtccacgaaccaagctcaatagtactggtcgtgagggagtgtgttaaagagtcccgcat 41069326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 258
Target Start/End: Original strand, 42895320 - 42895461
Alignment:
Q  118 acgatttctaagatggtattagaacctctagaagatctgtt-gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcacc 216  Q
    |||||||||| |||||||| ||| |||||  ||||||  || |||||||||| ||| | | |||  ||||||||  ||||||||||||| ||| || |||    
T  42895320 acgatttctatgatggtatcagagcctctctaagatccattagggccacctgatatcaagtttccgctatcgggcgacccaccatttatgtccctgaacc 42895419  T
Q  217 aagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    || || ||||||| | | |||||| | |||||||||||||||    
T  42895420 aaacctaatagtgttggtcgtgagagcgtgtgttaaagagtc 42895461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 10571017 - 10571061
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||    
T  10571017 tttgtggggttgtgttaggctcaaccacgatttctaagatggtat 10571061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 33381228 - 33381180
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattaga 140  Q
    |||||| | |||| |||| ||||||||||||||||||||||||||||||    
T  33381228 tttgtgaggttgtgttagtcccaaccacgatttctaagatggtattaga 33381180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 44529785 - 44529729
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtga 239  Q
    |||||| | |||||||||||||||| || |||||||||||||||||| | |||||||    
T  44529785 ctatcgagccacccaccatttatattcacgcaccaagcccaatagtgttgggcgtga 44529729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 29718343 - 29718429
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    ||||| |||||||||| |||||| |   ||| |||||||| |||| ||||||| |||||||||||||||| |||||| ||| |||||    
T  29718343 aagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagttggtatcagagcctct 29718429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 297
Target Start/End: Complemental strand, 31001950 - 31001815
Alignment:
Q  162 ccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccg 261  Q
    ||||||||||| ||| |||  |||||  | |||| |||||||||||||| | |||||||||||||||| | ||| |||  | |||||||| ||| || |     
T  31001950 ccacctgctatcaggtttccgctatcatgccacctaccatttatatccacgaaccaagcccaatagtgatgggcatgaatgggtgtgttagagaatctca 31001851  T
Q  262 cattggttgggagatggcctgaagaagtgtttataa 297  Q
    ||| ||||| ||||| ||||||| || | |||||||    
T  31001850 catcggttgagagatcgcctgaataaatatttataa 31001815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 344
Target Start/End: Complemental strand, 4060238 - 4060208
Alignment:
Q  314 ctcctcaagatctcaggttcgattctctctg 344  Q
    |||||||||||||||||||||||||||||||    
T  4060238 ctcctcaagatctcaggttcgattctctctg 4060208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 5509126 - 5509180
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| |||| ||||||||||||| ||||||||| ||||||| ||| |||||    
T  5509126 tttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagagcctct 5509180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 31700782 - 31700744
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  31700782 tttgtgggtttgtgttaggcccaaccacgatttctaaga 31700744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 1926510 - 1926446
Alignment:
Q  62 aagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgattt 124  Q
    ||||||||| |||||| ||||||  |||||| ||||| ||||||| |||||| ||||||||||||    
T  1926510 aagtgggggtaatcctcacctcacaaatcggttttgtaggattgtgttaggctcaaccacgattt 1926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 19191679 - 19191611
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||| ||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||    
T  19191679 aagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19191611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 4772741 - 4772705
Alignment:
Q  182 tctatcgggtcacccaccatttatatccatgcaccaa 218  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  4772741 tctatcgggccacccaccatttatatccacgcaccaa 4772705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 8227328 - 8227384
Alignment:
Q  26 cacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacct 82  Q
    |||||||| || |||||||  |||||||||||||  |||||||||||||||| ||||    
T  8227328 cacattggatgagagatggcatgaacaagtgtttataagtgggggcaatcctcacct 8227384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 11020551 - 11020643
Alignment:
Q  40 gatggtctgaacaagtgttttcaagtgggggcaatccttacctca-aatcggattt-gtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||||||| | ||||||  |||||| ||||||||| |||||| || | ||||| |||||||||| ||||| |||| | ||||||||||||    
T  11020551 gatggtctgaaaatgtgtttataagtggaggcaatcctcacctcacaagccgatttagtgggattgtgttaggtccaatcgcgatttctaaga 11020643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 14927117 - 14927188
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||||||||||| |||||| |  || | |||||| | |||| |||||| |||||||||||||||||||    
T  14927117 aagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaagat 14927188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 21591824 - 21591872
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggta 135  Q
    |||| ||| |||| |||| |||||||||||||||||||||||| |||||    
T  21591824 tcggttttatggggttgtgttaggcccaaccacgatttctaagttggta 21591872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 26006649 - 26006596
Alignment:
Q  186 tcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagg 241  Q
    ||||| |||||| ||||||||||||  ||||||||||||||||||| || ||||||    
T  26006649 tcgggccacccaacatttatatcca--caccaagcccaatagtgctgggtgtgagg 26006596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 37840384 - 37840432
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattaga 140  Q
    |||||||| |||| || ||||||||||| |||| |||||||||||||||    
T  37840384 tttgtggggttgtgttgggcccaaccacaatttttaagatggtattaga 37840432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 38629883 - 38630007
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgttgggccacctgctataaggattcttcta 185  Q
    |||| ||||||| ||||| ||| |  ||| |||||||| ||||||||||| ||| |||| |  |||||| | |||| ||||| |||| ||| |||  |||    
T  38629883 tcggttttgtggaattgtgttatgttcaatcacgatttttaagatggtatcagagcctcctccaagatccgatgggtcaccttctattaggtttccgcta 38629982  T
Q  186 tcgggtcacccaccatttatatcca 210  Q
    |||| |||||| |||||||||||||    
T  38629983 tcggatcacccgccatttatatcca 38630007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 62 - 297
Target Start/End: Original strand, 13353216 - 13353452
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||  |||  ||| |||||||| |||| |||||||||||||| |||||||||||||||| ||| |||||  ||||||  |||    
T  13353216 aagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattg 13353315  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    ||||||||| ||| ||| |||  |||||||| |||||||||||||| |||| | |||||||||||||||||| | |||||||| ||||||| ||||||||    
T  13353316 ggccacctgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcc 13353414  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    | ||| ||   ||| |||||||||  | ||||||||||    
T  13353415 cacatcggacaggacatggcctgacaatgtgtttataa 13353452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 62 - 297
Target Start/End: Original strand, 33796341 - 33796577
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||  |||  ||| |||||||| |||| |||||||||||||| |||||||||||||||| ||| |||||  ||||||  |||    
T  33796341 aagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattg 33796440  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    ||||||||| ||| ||| |||  |||||||| |||||||||||||| |||| | |||||||||||||||||| | |||||||| ||||||| ||||||||    
T  33796441 ggccacctgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcc 33796539  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    | ||| ||   ||| |||||||||  | ||||||||||    
T  33796540 cacatcggacaggacatggcctgacaatgtgtttataa 33796577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 311
Target Start/End: Complemental strand, 4868882 - 4868631
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgtt 158  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||| |  |||||| | |    
T  4868882 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatccgct 4868783  T
Q  159 gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||||||||||||| ||| |||   ||||||| |||||||||||||| |||| | |||||||||||||||||| | |||||||| ||||||| |||||||    
T  4868782 gggccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtc 4868684  T
Q  259 ccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    || ||| ||   ||| |||||||||  | |||||||||| ||| | |||||||    
T  4868683 ccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 4868631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 283
Target Start/End: Original strand, 33494554 - 33494776
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||| |||||||||||||||| |||||||||   |||||  |||    
T  33494554 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagaacctcttcgagatccattg 33494653  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    || |||||||||| ||| |||  |||||||| |||||||| ||||| | || | |||||||||||||||||| | ||||||   ||||||| ||||||||    
T  33494654 ggtcacctgctatcaggtttccactatcgggccacccaccgtttatgttcacgaaccaagcccaatagtgctggtcgtgagttggtgtgtt-aagagtcc 33494752  T
Q  260 cgcattggttgggagatggcctga 283  Q
    | ||| || | |||||||| ||||    
T  33494753 cacatcggataggagatggtctga 33494776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 9705035 - 9705226
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgtt 158  Q
    |||||||||||||| | |||||| |  |||| |||||||| |||| |||||||||||||| |||||||||||||||| ||| ||| ||  ||||| ||||    
T  9705035 aagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctcctccaagatttgtt 9705134  T
Q  159 gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||| ||| |||   ||||||| |||||||||||||| ||||   |||||| ||||||||||| | |||||||| |||||||||    
T  9705135 gggccacctgctatcaggtttccattatcgggccacccaccatttatgtcca--aaccaagtccaatagtgctggtcgtgagggggtgtgttaa 9705226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 41 - 252
Target Start/End: Complemental strand, 12330269 - 12330056
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtatta 138  Q
    |||||||||  | ||||||  |||||||||||| ||| |||||| |   ||| |||||| | |||| ||||||||||||||||||||||| ||||||| |    
T  12330269 atggtctgacaatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatca 12330170  T
Q  139 gaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtg 238  Q
    || |||||  ||||||  |||||||||||||||| ||| |||  | |||||| |||||||||||||| |||| | ||||||||||||  |||| | ||||    
T  12330169 gagcctctccaagatccattgggccacctgctatcaggtttccgccatcgggccacccaccatttatgtccacgaaccaagcccaattatgctggtcgtg 12330070  T
Q  239 agggtgtgtgttaa 252  Q
    |||| |||||||||    
T  12330069 agggggtgtgttaa 12330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 252
Target Start/End: Complemental strand, 6543036 - 6542820
Alignment:
Q  38 gagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggta 135  Q
    ||||||||||||  | ||||||  |||||||||||||| | |||||| |   ||| |||||||| |||| |||| ||||||||||||||| |||||||||    
T  6543036 gagatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagacccaaccacgatttcaaagatggta 6542937  T
Q  136 ttagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggc 235  Q
    | ||| |||||  ||||||  ||||| ||| |||||| ||| |||   |||||||||||||||||||||| |||| | |||||| ||||||  | | | |    
T  6542936 tcagagcctcttcaagatccattgggtcacttgctatcaggtttccgttatcgggtcacccaccatttatgtccacgaaccaagtccaatatcgttggtc 6542837  T
Q  236 gtgagggtgtgtgttaa 252  Q
    |||||||||||||||||    
T  6542836 gtgagggtgtgtgttaa 6542820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 3680059 - 3680209
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||||||||||| |||||||||||||||| ||| |||||  || |||  | ||| |||||||||| ||| |||  |||||||||    
T  3680059 tttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagaccctctccaaaatccatcgggtcacctgctattaggtttccgctatcgggt 3680158  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgaggg 242  Q
    || ||||||||||| ||||   |||||||||||||||| | | ||||||||    
T  3680159 catccaccatttatgtccacaaaccaagcccaatagtgttggtcgtgaggg 3680209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 6400873 - 6400732
Alignment:
Q  110 gcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatcc 209  Q
    ||||||||||||||| ||||||||||| | | |||||  || |||| | ||| |||||||||| ||| |||| |||||||  |||||||||||||| |||    
T  6400873 gcccaaccacgatttttaagatggtatcaaagcctctccaaaatctat-gggtcacctgctatcaggtttctgctatcggaccacccaccatttatgtcc 6400775  T
Q  210 atgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    | | |||||||||||||||||| | |||||||| | |||||||    
T  6400774 acgaaccaagcccaatagtgctggtcgtgagggggggtgttaa 6400732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 242
Target Start/End: Complemental strand, 33631873 - 33631692
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgg 160  Q
    |||||||  ||||||| |||||| || ||| |||||||| |||  ||||| ||||||| ||||| ||||||| ||| ||| | |||  ||||||| ||||    
T  33631873 aagtgggaacaatcctcacctcataaccggttttgtggggttgagttaggtccaaccatgatttttaagatgatatcagagcatctccaagatctattgg 33631774  T
Q  161 gccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgaggg 242  Q
    | |||||| ||| ||| |||| |||||||| |||||||||||||| ||||   ||||||| |||||||||| | ||||||||    
T  33631773 gtcacctgatatcaggtttctgctatcgggacacccaccatttatgtccactaaccaagctcaatagtgctggtcgtgaggg 33631692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 8026404 - 8026512
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||| ||||||| ||| |||||  | ||| |||||    
T  8026404 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctcttcacgatttgttg 8026503  T
Q  160 ggccacctg 168  Q
    |||||||||    
T  8026504 ggccacctg 8026512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 15082181 - 15082066
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctg-ttgggccacctgctataaggattcttctatcgg 189  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||| ||||||| ||  |||||| | |||| ||||||||||| ||| |||   ||||||    
T  15082181 tttgtgggattgtgttaggcccaaacacgatttctaatatggtatcagaacctcctctaagatccgtttggaccacctgctatcaggtttccattatcgg 15082082  T
Q  190 gtcacccaccatttat 205  Q
    | ||||||||||||||    
T  15082081 gccacccaccatttat 15082066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 17147867 - 17147772
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||| |||||||||| ||| |||  ||||| ||||||||||||||||| |||| | |||||||||||||||||| |  ||||||| |||||||||    
T  17147867 ttgggtcacctgctatcaggtttccgctatcaggtcacccaccatttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgttaa 17147772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 27653232 - 27653318
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    ||||||||| |||||| |||||| |  |||| ||||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||    
T  27653232 aagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatatggtatcagagcctct 27653318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 31961055 - 31961150
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||||| ||| |||| |||||| | | |||||||||||| |||| | ||||||||||||||| |||| ||||||||  ||||||||    
T  31961055 ttgggccacctgctatcaggtttctgctatcgtgccccccaccatttatgtccacggaccaagcccaatagtactagtcgtgaggggatgtgttaa 31961150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 6054216 - 6054342
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||||| || |||| | |||||||||||||||||||| ||| |||||||||  |||||   || ||||||||||||| ||| |||  |||| || |    
T  6054216 tttgtgggatcgtgttagactcaaccacgatttctaagatgatatcagaacctcttcaagattcattaggccacctgctatcaggtttccgctattggat 6054315  T
Q  192 cacccaccatttatatccatgcaccaa 218  Q
    |||| ||| ||||| |||||| |||||    
T  6054316 caccgaccgtttatgtccatgaaccaa 6054342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 11721920 - 11721992
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatg 132  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||||    
T  11721920 aagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagatg 11721992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 11085628 - 11085708
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctat 172  Q
    |||||| | |||| ||||| |||| |||||||||||||||||| ||||| |||||  |||||  |||||||||||||||||    
T  11085628 tttgtgcggttgtgttaggtccaatcacgatttctaagatggttttagagcctctccaagatacgttgggccacctgctat 11085708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 15081984 - 15081909
Alignment:
Q  55 tgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    ||||| ||||||||||||||||||| |||| |   ||| ||||||||||||| |||||||||| ||||||||||||    
T  15081984 tgtttacaagtgggggcaatccttaactcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaa 15081909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 4868646 - 4868576
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  4868646 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 8001619 - 8001506
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgtt 158  Q
    |||||||||||||| | |||||| |  |||  ||||| || |||| |||||||||||||| |||||||||||||||| |||  || ||  |||||| |||    
T  8001619 aagtgggggcaatcttcacctcataagtcgattttgttgggttgtgttaggcccaaccacaatttctaagatggtatcagagtctccttaaagatccgtt 8001520  T
Q  159 gggccacctgctat 172  Q
    ||||||||||||||    
T  8001519 gggccacctgctat 8001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 30256596 - 30256669
Alignment:
Q  65 tgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    ||||||||||||| | ||||  || ||| |||||||| |||| |||||||||||||||||||||||| ||||||    
T  30256596 tgggggcaatcctcaactcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaggtggtat 30256669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 20373617 - 20373661
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||    
T  20373617 tttgtggggttgtgttaggcccaaccacgatttataagatggtat 20373661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 20830634 - 20830726
Alignment:
Q  166 ctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    ||||||| ||| || | ||||||| ||||||| ||||||| |||| | ||||||||||||| | || | |||||| |||| ||||||||||||    
T  20830634 ctgctatcaggtttttgctatcggatcacccatcatttatttccacgaaccaagcccaataatactggtcgtgagagtgtatgttaaagagtc 20830726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 21690737 - 21690813
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggattt-gtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||||||||| |||||| || | ||||| ||||| |||| |||||| |||||||||||||||| |||||||    
T  21690737 aagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaatatggtat 21690813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 30256859 - 30256903
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| ||||||||||||||||||||||| |||||||    
T  30256859 tttgtggggttgtgttaggcccaaccacgatttctaatatggtat 30256903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 32290775 - 32290923
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    ||||| || |||| ||||||| ||| ||||||||||||||||||||||| | |||  || |||  | ||||||||| |||| ||  ||   ||||||||     
T  32290775 tttgtagggttgtgttaggccaaacaacgatttctaagatggtattagagcatctccaatatccatcgggccacctactatcagattttcgctatcgggc 32290874  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgag 240  Q
    |||||||||||||| ||||   | ||||||||||| |||| | ||||||    
T  32290875 cacccaccatttatgtccacaaatcaagcccaataatgctggtcgtgag 32290923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 6623479 - 6623409
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| ||||  |||  ||| |||||||| |||| ||||| |||||||||||||||||||    
T  6623479 aagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggtccaaccacgatttctaaga 6623409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 9705269 - 9705339
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||| ||||||||||||||||||||    
T  9705269 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 19712967 - 19713037
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||||||||| || |||||| |   ||| ||||||||||||| |||||||||||||| ||||||||||    
T  19712967 aagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccaccatttctaaga 19713037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 4161883 - 4161845
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  4161883 tttgtggggttgtgttaggcccaaccacgatttctaaga 4161845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 4223503 - 4223465
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  4223503 tttgtggggttgtgttaggcccaaccacgatttctaaga 4223465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 8026622 - 8026687
Alignment:
Q  65 tgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    ||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||    
T  8026622 tgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 8026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 9496432 - 9496494
Alignment:
Q  185 atcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgt 247  Q
    |||||| ||||||||||||||||  | |||||||||| ||||||| | |||||||||| ||||    
T  9496432 atcgggccacccaccatttatatatacgcaccaagcctaatagtgttgggcgtgagggggtgt 9496494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 19712729 - 19712817
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttt--taggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |  ||||||||||||| |||||||||||||||| ||| |||||    
T  19712729 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtgttaggcccaaccaccatttctaagatggtatcagagcctct 19712817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 27993578 - 27993512
Alignment:
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||| ||||||||||||||||||||| || |||||||| | || |||| |  |||||||||||||||    
T  27993578 cacctaccatttatatccatgcaccaggcacaatagtgttgggtgtgaagaggtgtgttaaagagtc 27993512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 5572684 - 5572599
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||| ||||| |||||| || | | |||||||| || | || |||||||||||||||||||| ||||||| ||| |||||    
T  5572684 aagtgggggccatcctcacctcacaagccggtttgtggggttttgttcggcccaaccacgatttctaatatggtatcagagcctct 5572599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 8567005 - 8566960
Alignment:
Q  83 caaatcggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||| ||| |||||||| |||| |||||||||||||||||||||||    
T  8567005 caaaccggttttgtggggttgtgttaggcccaaccacgatttctaa 8566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 832887 - 832943
Alignment:
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtg 248  Q
    ||||||| ||||| ||||||| |||||||||||||||| | ||| |||||| |||||    
T  832887 cacccacaatttacatccatgtaccaagcccaatagtgatgggcatgagggggtgtg 832943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 2736444 - 2736320
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgttgggccacctgctataaggattcttcta 185  Q
    |||| ||||| ||||||| ||| ||| ||||||||||||||| ||| ||| ||| |||  |  ||||||| |||||||||||||||| ||| |||   ||    
T  2736444 tcggttttgttggattgtgttaagcctaaccacgatttctaaaatgatatcagagcctgattcaagatctattgggccacctgctattaggtttccgtta 2736345  T
Q  186 tcgggtcacccaccatttatatcca 210  Q
    ||||  |||||| ||||||| ||||    
T  2736344 tcggaccacccatcatttatgtcca 2736320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 5572426 - 5572386
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttcta 127  Q
    |||| |||||||| |||| ||||||||||||||||||||||    
T  5572426 tcggttttgtggggttgtgttaggcccaaccacgatttcta 5572386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 27772729 - 27772804
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggta 135  Q
    |||||||||||||||| |||||| |   ||| |||||||  |||| ||||| ||||||||||||||||| ||||||    
T  27772729 aagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctaatatggta 27772804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 25620151 - 25620343
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||    
T  25620151 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattg 25620250  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||| ||| |||  |||| ||| |||||||||||||| |||| | |||||||||||||||| | | ||||| ||||||||||||    
T  25620251 ggccacctgctatcaggtttccgctattgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaaggtgtgtgttaa 25620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 62 - 311
Target Start/End: Original strand, 29469620 - 29469870
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||  |||  ||| |||||||| |||| ||||||||||||||||||||||| ||||||| ||| |||||  ||||||  |||    
T  29469620 aagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctctccaagatccattg 29469719  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    ||||||||| ||| ||| |||  |||||||| |||||||||||||| |||| | | |||||||||||||||| | |||||||| ||||||| ||||||||    
T  29469720 ggccacctgttatcaggcttccgctatcgggccacccaccatttatgtccacgaatcaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcc 29469818  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    | ||| ||   ||| |||||||||  | |||||||||| ||| | |||||||    
T  29469819 cacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 29469870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 21861309 - 21861501
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    ||||| |||||||||| ||||  |||  ||| ||||||||||||| |||||||||||||| |||||||||||||||| ||| |||||  ||||||  |||    
T  21861309 aagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattg 21861408  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||| ||| ||| |||  |||||||| |||||||||||||| |||| | |||||||| ||||||||| | |||||||| |||||||||    
T  21861409 ggccacctgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcctaatagtgctggtcgtgagggggtgtgttaa 21861501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 36277295 - 36277103
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |  |||  |||||||| |||| |||| |||||||||||||||||||||| ||| ||| |||||  ||||||  |||    
T  36277295 aagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgttagtcccaaccacgatttctaagatgttatcagagcctctccaagatccattg 36277196  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||| |||| ||| |||  |||||||  |||||||||||||| |||| | |||||||||||||||||| | |||||||| |||||||||    
T  36277195 ggccacctactatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 36277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 1596609 - 1596800
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgg 160  Q
    |||||||||||||||| |||| | || | | |||||||| |||| ||||||| |||||| |||||||||||||||| ||| |||||  ||||||  ||||    
T  1596609 aagtgggggcaatcctcaccttacaagccggtttgtggggttgtgttaggcctaaccacaatttctaagatggtatcagagcctctccaagatccattgg 1596708  T
Q  161 gccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||| || ||| ||| |||  |||||||| |||||||||||||| |||| | |||||||||||||||||| | |||||| |||||||||||    
T  1596709 gccacatgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagagtgtgtgttaa 1596800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 92 - 229
Target Start/End: Original strand, 33834238 - 33834375
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||||||||||| |||||||||||||||| ||| |||||  ||||||  |||||||||||||||| ||| ||   ||||||||     
T  33834238 tttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattgggccacctgctatcaggttttccctatcgggc 33834337  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    |||||||||||||| |||| | ||||||||||||||||    
T  33834338 cacccaccatttatgtccacgaaccaagcccaatagtg 33834375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 33996380 - 33996191
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||| | |||||| |  |||| |||||||  |||| ||||||||||||||||||||||||||||||| ||| |||||  |   ||  |||    
T  33996380 aagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcctctcca---tccattg 33996284  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||| ||| |||  | |||||| |||||||||||||| |||| | |||||||||||||||| |   |||||||||||| |||||    
T  33996283 ggccacctgctatcaggtttccgcaatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttgatcgtgagggtgtgagttaa 33996191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 30727334 - 30727172
Alignment:
Q  149 aagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtg 248  Q
    ||||| ||||||||||||| |||| ||| |||  |||| ||| |||||||||||||||||||   || ||||||||||||| | |||||||||| |||||    
T  30727334 aagatttgttgggccaccttctatcaggtttccgctattgggccacccaccatttatatccacaaactaagcccaatagtgttgggcgtgagggggtgtg 30727235  T
Q  249 ttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    |||||||||  | ||| ||||| || |||||| ||| |||||||||||| ||| | |||||||    
T  30727234 ttaaagagtgacacatcggttgagaaatggccagaataagtgtttataagtgggggcaatcct 30727172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 242
Target Start/End: Original strand, 4886385 - 4886526
Alignment:
Q  101 ttgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccacca 200  Q
    |||| ||||||||||||||||||||||||||||||| ||   ||||  ||||||  |||||||||||||||| | | |||| |||||| | |||||||||    
T  4886385 ttgtgttaggcccaaccacgatttctaagatggtatcagggtctctccaagatccattgggccacctgctatcaagtttctactatcgagccacccacca 4886484  T
Q  201 tttatatccatgcaccaagcccaatagtgctaggcgtgaggg 242  Q
    ||||| |||| | ||||||||||||||| || | ||||||||    
T  4886485 tttatgtccacgaaccaagcccaatagtactggtcgtgaggg 4886526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 275
Target Start/End: Complemental strand, 48417617 - 48417371
Alignment:
Q  29 attggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttct 126  Q
    ||||||| |||||||| ||||||||||||||  ||||| | |||||| | ||||||  || | | |||||||| |||| |||||||||||||| ||||||    
T  48417617 attggtttggagatggcctgaacaagtgtttataagtgagagcaatcttgacctcacaaaccagttttgtggggttgtgttaggcccaaccacaatttct 48417518  T
Q  127 aagatggtattagaacc-tctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatat-ccatgcaccaagcccaa 224  Q
     ||||||||||||| || |||    ||||  ||||||||||||||||   | |||  |||||||| || ||||||||||||| |||||||||||||||||    
T  48417517 tagatggtattagagccttctccttgatccattgggccacctgctatcttgtttccgctatcggg-caaccaccatttatatcccatgcaccaagcccaa 48417419  T
Q  225 tagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggaga 275  Q
    |||||||  ||||| |  |||||||   ||| |||| ||||||||||||||    
T  48417418 tagtgctgagcgtgtgtatgtgtgt---agaatcccacattggttgggaga 48417371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 31485728 - 31485536
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||  |||  ||| ||||||   |||| ||||||| |||||| |||||||||||||||| ||| || ||| ||||||  |||    
T  31485728 aagtgggggcaatcctcacctgacaagccggttttgtgaagttgtgttaggcctaaccacaatttctaagatggtataagagccgctacaagatccattg 31485629  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||| |||| ||| ||   |||||||| ||||||||||||||||||| | | ||| |||||||||| |   |||||||| |||||||||    
T  31485628 ggccacctactatcaggttttcactatcgggccacccaccatttatatccacgaatcaaacccaatagtgttgttcgtgagggggtgtgttaa 31485536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 229
Target Start/End: Complemental strand, 48661622 - 48661455
Alignment:
Q  64 gtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttggg 161  Q
    |||||||||||||| |||||| |   ||| |||||| |||||| |||| |||||||||||||||||| ||| ||| ||| |||||  |||| |  ||| |    
T  48661622 gtgggggcaatcctcacctcacaagccggttttgtgagattgtgttagacccaaccacgatttctaatatgatatcagagcctctttaagaaccattgag 48661523  T
Q  162 ccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    ||||||||||| ||| |||  || ||||| |||||||||||||| |||| | ||||||||||||||||    
T  48661522 ccacctgctatcaggtttccgctttcgggccacccaccatttatgtccacgaaccaagcccaatagtg 48661455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 21821853 - 21821932
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgcta 171  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||  |||||  ||||||||| ||||||    
T  21821853 tttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaagatacgttgggccaactgcta 21821932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 22574662 - 22574808
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    |||||| ||||||| ||||||| |||||||| |||  ||||  ||||||  |||||||||||||||| ||| |||  |||||||  ||||||||||||||    
T  22574662 ttaggctcaaccacaatttctatgatggtataagagtctctccaagatccattgggccacctgctatcaggtttcagctatcggaccacccaccatttat 22574761  T
Q  206 atccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
     || | | |||||||||||||||| | | |||||||  |||||||||    
T  22574762 gtctacgaaccaagcccaatagtgttggtcgtgaggtggtgtgttaa 22574808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 3520055 - 3519926
Alignment:
Q  113 caaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatg 212  Q
    |||||||||||||| || |||||| ||| |||||  | ||||  ||||||||||||||||  || ||   |||||||| |||||||||||||| |||| |    
T  3520055 caaccacgatttcttagttggtatcagagcctctccatgatccattgggccacctgctatctggttttcgctatcgggacacccaccatttatgtccacg 3519956  T
Q  213 caccaagcccaatagtgctaggcgtgaggg 242  Q
     |||||||||||||||||| | ||||||||    
T  3519955 aaccaagcccaatagtgctggtcgtgaggg 3519926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 252
Target Start/End: Complemental strand, 6001687 - 6001547
Alignment:
Q  112 ccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccat 211  Q
    ||||||||||||||||||||||||| ||| |||||  || || | || || || ||||||| ||| |||  |||||| ||| |||||||||||| ||||     
T  6001687 ccaaccacgatttctaagatggtatcagagcctcttcaaaatttattaggtcatctgctatcaggtttcccctatcgagtctcccaccatttatttccac 6001588  T
Q  212 gcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    | |||||||| |||| |||| | |||||||| |||||||||    
T  6001587 gaaccaagcctaataatgctggtcgtgagggagtgtgttaa 6001547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 47849695 - 47849771
Alignment:
Q  184 tatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtccc 260  Q
    ||||||| ||||||||||||||||||| |||| |||| |||||||  | ||||||| ||||||||||||||||||||    
T  47849695 tatcgggccacccaccatttatatccacgcactaagctcaatagtattgggcgtgaaggtgtgtgttaaagagtccc 47849771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 297
Target Start/End: Complemental strand, 3519923 - 3519793
Alignment:
Q  166 ctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcatt 265  Q
    ||||||| ||| |||  |||||||| |||||||||||||| |||| | ||||||||||||| |||| | |||||||| ||||||| ||||||||| |||     
T  3519923 ctgctatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtgtt-aagagtcccacatc 3519825  T
Q  266 ggttgggagatggcctgaagaagtgtttataa 297  Q
    || | || ||||||||||  | ||||||||||    
T  3519824 ggataggtgatggcctgacaatgtgtttataa 3519793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 26240006 - 26239872
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtatta 138  Q
    |||||||||  | ||||||  |||||||||||||||| |||||| |  ||||  ||||||| |||| |||| ||||||||| |||||||||||||||| |    
T  26240006 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagatggtatca 26239907  T
Q  139 gaacct-ctagaagatctgttgggccacctgctat 172  Q
    || ||| ||  |||||| |||||||||||||||||    
T  26239906 gagcctcctccaagatccgttgggccacctgctat 26239872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 31892212 - 31892359
Alignment:
Q  106 ttaggcccaa-ccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccattta 204  Q
    |||||||||| || |||| |||||||||| || ||| |||||  |||| || |||||||||||||||| ||| |||   |||| || |||||||||||||    
T  31892212 ttaggcccaaaccccgatctctaagatggaatcagagcctctccaagacctattgggccacctgctatcaggtttccgttatcaggccacccaccattta 31892311  T
Q  205 tatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    | |||| | ||||||||||||| || | | |||||||| |||||||||    
T  31892312 tgtccacgaaccaagcccaataatgatggtcgtgagggggtgtgttaa 31892359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 34027408 - 34027494
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||    
T  34027408 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtattagagcctct 34027494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 2404424 - 2404228
Alignment:
Q  113 caaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatg 212  Q
    |||||||||||||||||||||||| ||| |||||   | |||  ||||| |||||||||| ||| |||  |||| ||  |||| ||| ||||| |||| |    
T  2404424 caaccacgatttctaagatggtatcagagcctcttcgaaatccattgggtcacctgctatcaggtttccgctattggaccacctaccgtttatgtccacg 2404325  T
Q  213 caccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
     ||||||| |||||||||| | |||||| | ||||||| ||||||||| ||| |||| |||||||| ||||  | |||||||||| ||| | |||||||    
T  2404324 aaccaagcgcaatagtgctggtcgtgagag-gtgtgtt-aagagtcccacatcggttaggagatggactgacaatgtgtttataagtgggggcaatcct 2404228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 32292657 - 32292703
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  32292657 ctatcgggtcacccaccatatatatccacgcaccaagcccaatagtg 32292703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 2544516 - 2544440
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||||||||| |||||| |  |||| |||||||| |||| ||||||||||||||||||| ||| |||||||    
T  2544516 aagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttttaatatggtat 2544440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 10882275 - 10882222
Alignment:
Q  93 ttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||    
T  10882275 ttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct 10882222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 28080706 - 28080791
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctat 172  Q
    |||| |||||||| || | ||||  ||||||||||||||||||||| ||| ||| |||||  ||||||| ||||||||||||||||    
T  28080706 tcggttttgtggggttatgttagatccaaccacgatttctaagatgatatcagagcctcttcaagatctattgggccacctgctat 28080791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 43688228 - 43688159
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||||||||||||||||||  || | | |||||||| |||| |||||||||||||||||||||||||    
T  43688228 aagtgggggcaatccttacctctcaagccggtttgtggggttgtgttaggcccaaccacgatttctaaga 43688159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 40121961 - 40121917
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  40121961 tttgtggggttgtgttaggcccaaccacgatttctaagatggtat 40121917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 40746312 - 40746366
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| |||| |||||||||||||| |||||||| ||||||||||| |||||    
T  40746312 tttgtggggttgtgttaggcccaaccacaatttctaatatggtattagagcctct 40746366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 226
Target Start/End: Complemental strand, 44874611 - 44874481
Alignment:
Q  96 tgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacc 195  Q
    |||| |||| ||||||| |||||| || ||||||||||||| |||  ||||  ||||||  ||||| |||||||||| ||| |||  | |||||||||||    
T  44874611 tgggcttgtgttaggccaaaccacaatgtctaagatggtatcagagtctcttcaagatccattgggtcacctgctatcaggtttccacaatcgggtcacc 44874512  T
Q  196 caccatttatatccatgcaccaagcccaata 226  Q
    || ||||||| || | | ||||| |||||||    
T  44874511 catcatttatgtctacgaaccaaacccaata 44874481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 31257336 - 31257260
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    ||||||||||||||||||  ||| |   ||| |||||||| |||| ||||||||||||||||||||||| |||||||    
T  31257336 aagtgggggcaatccttaattcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtat 31257260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 48243152 - 48243060
Alignment:
Q  40 gatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||||||  | ||||||  |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||| |||||    
T  48243152 gatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttgtaaga 48243060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 2962509 - 2962541
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    |||||||||||||||||||||||||||||||||    
T  2962509 tcctcctcaagatctcaggttcgattctctctg 2962541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 21055022 - 21054951
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||| |||||||||||    
T  21055022 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 21054951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 36993345 - 36993265
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctat 172  Q
    ||||||| ||||| ||||  ||||||| ||||||||||||||||| ||| |||||  ||||||  ||||||||| ||||||    
T  36993345 tttgtggaattgtgttagatccaaccatgatttctaagatggtatcagagcctcttcaagatccattgggccacgtgctat 36993265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 40746204 - 40746145
Alignment:
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||| |||| | |||||||||||||||||| | |||||||| |||||||||    
T  40746204 cacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggg-gtgtgttaa 40746145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 48417631 - 48417583
Alignment:
Q  249 ttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    ||||||||||||  ||||||| |||||||||||||| ||||||||||||    
T  48417631 ttaaagagtcccagattggtttggagatggcctgaacaagtgtttataa 48417583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 1000564 - 1000634
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| ||||  |||  ||| |||||||| |||| || ||||||||||||||||||||||    
T  1000564 aagtgggggcaatcctcaccttacaagacggttttgtggggttgtctttggcccaaccacgatttctaaga 1000634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 2315233 - 2315138
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||||| ||  |||  | |||||  |||||||||||||| |||| | |||||||||||||||| | | |||||||| |||| ||||    
T  2315233 ttgggccacctgctatcagatttccgcaatcggaccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtattaa 2315138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 343
Target Start/End: Complemental strand, 9608655 - 9608624
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctct 343  Q
    ||||||||||||||||||||||||||||||||    
T  9608655 tcctcctcaagatctcaggttcgattctctct 9608624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 343
Target Start/End: Complemental strand, 9836227 - 9836196
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctct 343  Q
    ||||||||||||||||||||||||||||||||    
T  9836227 tcctcctcaagatctcaggttcgattctctct 9836196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 4267909 - 4267947
Alignment:
Q  98 ggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  4267909 ggattgtgttaggcccaaccacgatttttaagatggtat 4267947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 17202226 - 17202280
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| |||| ||||||||||||||||||| ||| ||||||| ||| |||||    
T  17202226 tttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagcctct 17202280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 14540922 - 14540853
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||| ||| | |||||| ||||   |||||||||||||||||| | | ||||||||||||||||    
T  14540922 ctatcgggtcgcccgctatttatgtccacaaaccaagcccaatagtgctggtcatgagggtgtgtgttaa 14540853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 29469855 - 29469923
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||| ||||  |||  ||| |||||||  |||| |||||||||||||||||||||||    
T  29469855 aagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgatttctaa 29469923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 44056625 - 44056682
Alignment:
Q  182 tctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtga 239  Q
    |||||| || ||||||||||||||||||| ||| ||| |||||||||| | |||||||    
T  44056625 tctatcaggccacccaccatttatatccacgcatcaatcccaatagtgttgggcgtga 44056682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 3038153 - 3038082
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||||||||||| || ||| |   ||| |||||||| |||| ||||||||||||| ||||||||||||    
T  3038153 aagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagat 3038082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 6782908 - 6782952
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| |||||| |||||||||||||||| |||||||    
T  6782908 tttgtggggttgtgttaggctcaaccacgatttctaacatggtat 6782952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 11700215 - 11700247
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  11700215 tcctcctcaaggtctcaggttcgattctctctg 11700247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 13106808 - 13106776
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  13106808 tcctcctcaaggtctcaggttcgattctctctg 13106776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 21558178 - 21558210
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  21558178 tcctcctcaaggtctcaggttcgattctctctg 21558210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 26459436 - 26459404
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  26459436 tcctcctcaaggtctcaggttcgattctctctg 26459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 36238138 - 36238182
Alignment:
Q  185 atcgggtcacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    |||||||||||| |||||||||| ||||||| |||||||| ||||    
T  36238138 atcgggtcacccgccatttatatacatgcactaagcccaacagtg 36238182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 62 - 311
Target Start/End: Original strand, 4155339 - 4155589
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||||||   ||| |||||||| |||| ||||||||||||||||||||||||||||||| |||  ||||  |||||   |||    
T  4155339 aagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctctccaagattcattg 4155438  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    ||||||||||||| ||| |||  |||||||| |||||||| ||||| || | | |||||||||||||||||| | |||||| | ||||||| ||||||||    
T  4155439 ggccacctgctatcaggtttccgctatcgggccacccaccgtttatgtcgacgaaccaagcccaatagtgctggtcgtgagagggtgtgtt-aagagtcc 4155537  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    | ||| |  | ||| | |||||||  | |||||||||| ||| |||||||||    
T  4155538 cacatcgcataggacaaggcctgacaatgtgtttataagtggggacaatcct 4155589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 92 - 260
Target Start/End: Complemental strand, 13574958 - 13574789
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctag--aagatctgttgggccacctgctataaggattcttctatcgg 189  Q
    |||||||| |||| |||||||||||||| |||||||| ||||||| | | |||| ||  ||||||  |||||||||||||||| ||| |||  ||||||     
T  13574958 tttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagcctc-agttaagatccattgggccacctgctatcaggtttccgctatcgt 13574860  T
Q  190 gtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtccc 260  Q
    |||||||||||||||| |||| | |||||||||||||||||||| |||||||| |||||||||||||||||    
T  13574859 gtcacccaccatttatgtccacgaaccaagcccaatagtgctagtcgtgagggagtgtgttaaagagtccc 13574789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 16239606 - 16239799
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgtt 158  Q
    |||||||||||| ||| |||||| |   ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| ||  |||||| |||    
T  16239606 aagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatccgtt 16239705  T
Q  159 gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
     ||||||||||||| ||| |||   ||||| | |||||||||||||| |||| | ||||||| |||||||| | | |||||||| |||||||||    
T  16239706 tggccacctgctatcaggtttccgttatcgagccacccaccatttatgtccacgaaccaagctcaatagtgatggtcgtgagggggtgtgttaa 16239799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 297
Target Start/End: Complemental strand, 35038497 - 35038262
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||  |||   || |||||||| |||| |||||||||||||||| |||||||||||||| ||  |||||  ||||||  |||    
T  35038497 aagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaagatggtatcagtgcctctccaagatccattg 35038398  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    |||||||||| || ||| |||  ||||| || |||||||||||||| |||| | ||||||||||||||| || | |||||||| ||||||| ||||||||    
T  35038397 ggccacctgcaatcaggtttccgctatc-ggccacccaccatttatgtccacgaaccaagcccaatagtactggtcgtgagggggtgtgtt-aagagtcc 35038300  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    | ||| || | || ||||||||||  | ||||||||||    
T  35038299 cacatcggataggtgatggcctgacaatgtgtttataa 35038262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 62 - 252
Target Start/End: Complemental strand, 20327918 - 20327726
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||| ||||||||| ||||||| ||  |||||  || |||  |||    
T  20327918 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagtgcctctctaaaatccattg 20327819  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||| ||| |||  |||||||| |||||||||||||| |||| | |||||||||||||||| | | |||||| | |||||||||    
T  20327818 ggccacctgctatcaggtttccgctatcgggccacccaccatttatgtccaggaaccaagcccaatagtgttggtcgtgagcgggtgtgttaa 20327726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 123 - 267
Target Start/End: Complemental strand, 22775641 - 22775496
Alignment:
Q  123 ttctaagatggtattagaacctc-tagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcc 221  Q
    |||||||||||||| ||| |||| |  ||||||| |||||||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||| ||    
T  22775641 ttctaagatggtatcagagcctccttcaagatctattgggccacctgctattaggtttctgctatcgggccacccaccatttatatccatgcaccaatcc 22775542  T
Q  222 caatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattgg 267  Q
    |||||||| | ||| |||||  ||||||| | ||||||| ||||||    
T  22775541 caatagtgttgggcatgaggtggtgtgtttaggagtcccacattgg 22775496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 267
Target Start/End: Complemental strand, 50052800 - 50052638
Alignment:
Q  101 ttgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccacca 200  Q
    |||| |||||||||||||| |||||||| || |||| ||| |||||  ||||||  | |||||||||||||| ||| |||| || |||||||| || |||    
T  50052800 ttgtgttaggcccaaccactatttctaatattgtatcagagcctctctaagatccat-gggccacctgctatcaggtttctgctgtcgggtcatccgcca 50052702  T
Q  201 tttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattgg 267  Q
    | |||||||| |||||||||||||   || |||||||||||| ||||||||||||||||||||||||    
T  50052701 tctatatccacgcaccaagcccaa---tgttaggcgtgagggggtgtgttaaagagtcccgcattgg 50052638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 34992718 - 34992813
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||||| ||| |||  || |||||||||||||||||||| |||| | |||||||||||||||||| | |||||||| |||||||||    
T  34992718 ttgggccacctgctatcaggtttccgctgtcgggtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 34992813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 229
Target Start/End: Complemental strand, 20303422 - 20303285
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| ||||| |||||||| |||||||| ||||||| ||| |||||  || |||  |||||||||||||||| ||| |||  |||||||      
T  20303422 tttgtggggttgtgttaggtccaaccacaatttctaatatggtatcagagcctctctaaaatccattgggccacctgctatcaggtttccactatcggtc 20303323  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    |||||||||||||| |||| | |||||| |||||||||    
T  20303322 cacccaccatttatgtccacgaaccaagtccaatagtg 20303285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 229
Target Start/End: Original strand, 49629585 - 49629790
Alignment:
Q  26 cacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatt 123  Q
    |||||||| | |||||||| ||||| | ||||||  |||||| ||||||||  ||||||  || ||| |||||||| |||| |||| |||||  || |||    
T  49629585 cacattggataggagatgg-ctgaaaatgtgtttataagtggcggcaatccccacctcacaaaccggttttgtggggttgtgttagacccaattaccatt 49629683  T
Q  124 tctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtca-cccaccatttatatccatgcaccaagccc 222  Q
    | ||| ||||||||||| |||||  ||||||  |||| ||||||||||| ||| |||| |||||||  || |||||||||||| |||||  |||||||||    
T  49629684 tttaaaatggtattagagcctcttcaagatccattggaccacctgctatcaggtttctgctatcggagcatcccaccatttatgtccataaaccaagccc 49629783  T
Q  223 aatagtg 229  Q
    |||||||    
T  49629784 aatagtg 49629790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 54567907 - 54568019
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    ||||||||| |||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||    
T  54567907 aagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattg 54568006  T
Q  160 ggccacctgctat 172  Q
     ||||||||||||    
T  54568007 agccacctgctat 54568019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 31150948 - 31151028
Alignment:
Q  149 aagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    |||||| |||||||||| |||||| ||| |||   ||||||||||| |||||||||||| |||||||||||||||||||||    
T  31150948 aagatccgttgggccacttgctattaggtttccgttatcgggtcactcaccatttatatacatgcaccaagcccaatagtg 31151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 1723145 - 1723059
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||    
T  1723145 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct 1723059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 31317275 - 31317438
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga---tggtattagaacctc-tagaagatctgttgggccacctgctataaggattcttctatc 187  Q
    ||||||||||||| |||||| ||||||||||||||||||   |||||| |||  ||| |  |||||| ||||| |||||| |||| ||| || |  ||||    
T  31317275 tttgtgggattgtgttaggctcaaccacgatttctaagatggtggtatcagagtctcttccaagatccgttggaccacctactatcagg-ttttgttatc 31317373  T
Q  188 gggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||| |||||||||||||| |||| | ||||| | |||||||||| | |||||||| |||||||||    
T  31317374 gggccacccaccatttatgtccacgaaccaaactcaatagtgctggtcgtgagggggtgtgttaa 31317438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 46139344 - 46139446
Alignment:
Q  127 aagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaata 226  Q
    |||||||||||||| |||||  ||||||  ||||| |||||||||| ||| |||| |||||||| |||||||||||||| | ||   |||||||||||||    
T  46139344 aagatggtattagatcctctccaagatccattgggtcacctgctatcaggtttctgctatcgggccacccaccatttatgttcacaaaccaagcccaata 46139443  T
Q  227 gtg 229  Q
    |||    
T  46139444 gtg 46139446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 166
Target Start/End: Original strand, 54368508 - 54368637
Alignment:
Q  39 agatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||| ||||| | ||||||  |||||||||||||||| |||||| |   ||| ||| |||| |||| |||| ||||||||||||||||||||||||||    
T  54368508 agatggcctgaaaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaagatggtat 54368607  T
Q  137 tagaacctctagaagatctgttgggccacc 166  Q
     ||| |||||  ||||||  ||||||||||    
T  54368608 cagagcctcttcaagatccattgggccacc 54368637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 11589800 - 11589886
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| ||||||||||||||||||||||| ||||||| ||| |||||    
T  11589800 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 11589886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 34659259 - 34659137
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttat 205  Q
    |||||| |||| ||||||| ||||||||||| ||| |||||  |||||| ||||| |||| |||||| | | |||  |||||||  |||||| |||||||    
T  34659259 ttaggctcaactacgattt-taagatggtatcagagcctcttcaagatccgttggaccacatgctattaagtttccactatcggaccacccatcatttat 34659161  T
Q  206 atccatgcaccaagcccaatagtg 229  Q
    ||||||||||||| || |||||||    
T  34659160 atccatgcaccaaaccaaatagtg 34659137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 45828034 - 45828184
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||| ||||||||||| |||||| |   ||| |||||| | |||| |||||||| ||||| |||||||||||||||| ||| |||||  ||||||  |||    
T  45828034 aagttggggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaagatggtatcagagcctctccaagatccattg 45828133  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatcca 210  Q
     |||||||||||  ||| |||  |||||| | |||||||||||||| ||||    
T  45828134 cgccacctgctaccaggtttccgctatcgagccacccaccatttatgtcca 45828184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 22729090 - 22729191
Alignment:
Q  37 ggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggt 134  Q
    |||||||||||||  | |||||| ||||||||||||||||| || ||| |   ||| |||||| | |||| |||||||||||||| ||||||||||||||    
T  22729090 ggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaagatggt 22729189  T
Q  135 at 136  Q
    ||    
T  22729190 at 22729191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 20303133 - 20303061
Alignment:
Q  62 aagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaagatg 132  Q
    |||||||||||||||| ||||||  || ||| ||||||||||||| |||||| |||||||||||| |||||||    
T  20303133 aagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgttaggctcaaccacgatttttaagatg 20303061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 297
Target Start/End: Original strand, 21888525 - 21888657
Alignment:
Q  165 cctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcat 264  Q
    |||||||| ||| |||  |||||||  |||||||||||||||||||  || ||| |||||||||| | | |||||  ||||||||||||||||| | |      
T  21888525 cctgctatcaggtttccgctatcggaccacccaccatttatatccacacatcaaccccaatagtgttggacgtgaaagtgtgtgttaaagagtctcacgg 21888624  T
Q  265 tggttgggagatggcctgaagaagtgtttataa 297  Q
    |||||| |||||| ||||||  | |||||||||    
T  21888625 tggttgagagatgacctgaacgaatgtttataa 21888657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 39620160 - 39620220
Alignment:
Q  113 caaccacgatttctaagatggtattagaacct-ctagaagatctgttgggccacctgctat 172  Q
    |||||||||||||||||||||||| ||| ||| ||  ||||||||||||||||||||||||    
T  39620160 caaccacgatttctaagatggtatcagagcctcctccaagatctgttgggccacctgctat 39620220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 8142693 - 8142630
Alignment:
Q  83 caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| |||||||| |||| ||||| | ||||||||||||||||||||||| ||| |||||    
T  8142693 caaatcggttttgtggggttgtgttaggtctaaccacgatttctaagatggtatcagagcctct 8142630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 30332392 - 30332447
Alignment:
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgt 247  Q
    |||||||||||||||||||||||  || |||||||||||| |||||||||| ||||    
T  30332392 cacccaccatttatatccatgcattaatcccaatagtgctgggcgtgagggggtgt 30332447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 12930165 - 12930075
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgttgggccacctgctataaggattct 181  Q
    |||||||| |||| |||||||||||||| |||||||||||||||| | | ||| ||  | |||| ||||||||||||||||| ||| ||||    
T  12930165 tttgtggggttgtgttaggcccaaccaccatttctaagatggtatcaaagcctcctccatgatccgttgggccacctgctatcaggtttct 12930075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 39683454 - 39683380
Alignment:
Q  178 ttcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||| |||||||| |||||||||||||| |||| | ||||||||||||| |||| | ||||||||  ||||||||    
T  39683454 ttctgctatcgggccacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagggactgtgttaa 39683380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 45139040 - 45138955
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc 145  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| | || |||||||||||||||||||||||||| ||| ||||    
T  45139040 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaagatggtatcagagcctc 45138955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 23691493 - 23691413
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattaga 140  Q
    |||||||||||||||| |||||| |   |||||||||| |||||| ||||| |||| ||| |||| |||||||||||||||    
T  23691493 aagtgggggcaatcctcacctcacaagccggatttgtgagattgtgttaggtccaatcacaatttttaagatggtattaga 23691413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 17638281 - 17638325
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||    
T  17638281 tttgaggggttgtgttaggcccaaccacgatttctaagatggtat 17638325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 49637328 - 49637384
Alignment:
Q  186 tcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgaggg 242  Q
    ||||| ||||||||| |||||| || |||||||||||||||||| | ||||||||||    
T  49637328 tcgggccacccaccacttatatacacgcaccaagcccaatagtgttgggcgtgaggg 49637384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 472129 - 472059
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||||||||||||||||||| |   ||| |||||||| |||| ||||||| |||||||||||| ||||    
T  472129 aagtgggggcaatccttacctcacaagccggttttgtggggttgtgttaggccaaaccacgatttcaaaga 472059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 20303271 - 20303176
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||| |||||||||| ||| |||  |||||||  |||||||||||||| |||| | |||||| |||| |||||| | |||||| | |||||||||    
T  20303271 ttgggtcacctgctatcaggtttccgctatcggtccacccaccatttatgtccacgaaccaagtccaacagtgctggtcgtgagcgggtgtgttaa 20303176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 23897747 - 23897700
Alignment:
Q  193 acccaccatttatatccatgcaccaagcccaatagtgctaggcgtgag 240  Q
    |||||||||||||| ||||||| |||||||||||||| | ||||||||    
T  23897747 acccaccatttatacccatgcatcaagcccaatagtgttgggcgtgag 23897700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 24866244 - 24866283
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  24866244 tttgtggggttgtgttaggcccaaccacgatttctaagat 24866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 27670461 - 27670376
Alignment:
Q  62 aagtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||||||||||| ||||||||   ||| |||||||| |||| |||||||||||||| | |||||| ||||||| ||| |||||    
T  27670461 aagtgggggcaatcctcacctcaaaggccggttttgtggggttgtgttaggcccaaccacca-ttctaatatggtatcagagcctct 27670376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 35038263 - 35038193
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||||| |||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  35038263 aagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 1800067 - 1800125
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc 145  Q
    |||| |||||| | |||| |||||||||||||| |||||||||||||||| ||| ||||    
T  1800067 tcggttttgtgcggttgtattaggcccaaccacaatttctaagatggtatcagagcctc 1800125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 11659698 - 11659592
Alignment:
Q  113 caaccacgatttctaagatggtattagaacctc-tagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccat 211  Q
    |||||||||| |||||||| |||||||| |||| |  |||||| ||||| | ||||||||| ||| ||   |||||||  |||||||||||||| |||||    
T  11659698 caaccacgatgtctaagatcgtattagagcctcctccaagatccgttggacaacctgctatcaggttttcgctatcggaccacccaccatttatgtccat 11659599  T
Q  212 gcaccaa 218  Q
    || ||||    
T  11659598 gctccaa 11659592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 39269325 - 39269422
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||  | ||||||  |||||||||||||||| |||||| |   ||| |||| |||||||| ||||||| ||| ||||||| |||||||||||    
T  39269325 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgagggattgtgttaggcctaactacgatttttaagatggtat 39269422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 52480140 - 52480098
Alignment:
Q  187 cgggtcacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  52480140 cgggacacccaccatttatatccatgcacagagcccaatagtg 52480098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 20327683 - 20327619
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgattt 124  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||    
T  20327683 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 20327619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 22729631 - 22729700
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||| |||||||| |||||| |||| | ||||||||||||| |||||| |||||  | |||||||||    
T  22729631 ctatcggatcacccacaatttatgtccacgaaccaagcccaataatgctagtcgtgaacgggtgtgttaa 22729700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 23708293 - 23708213
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattaga 140  Q
    |||||||||||||||| |||||| |   ||| |||||| |||||| ||||| |||| ||| |||| |||||||||||||||    
T  23708293 aagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattaga 23708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 23726749 - 23726669
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattaga 140  Q
    |||||||||||||||| |||||| |   ||| |||||| |||||| ||||| |||| ||| |||| |||||||||||||||    
T  23726749 aagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattaga 23726669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 23745205 - 23745125
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattaga 140  Q
    |||||||||||||||| |||||| |   ||| |||||| |||||| ||||| |||| ||| |||| |||||||||||||||    
T  23745205 aagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattaga 23745125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 24063730 - 24063650
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattaga 140  Q
    |||||||||||||||| |||||| |   ||| |||||| |||||| ||||| |||| ||| |||| |||||||||||||||    
T  24063730 aagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattaga 24063650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 33640092 - 33640145
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc 145  Q
    ||||||||||||| |||||||||| ||| |||||||||||| ||| ||| ||||    
T  33640092 tttgtgggattgtgttaggcccaatcacaatttctaagatgatatcagagcctc 33640145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 39683336 - 39683268
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||| ||||||||| |||||| |   ||| ||||||||||||| |||||| ||||||||||||||||    
T  39683336 aagtggaggcaatcctcacctcacaagacggttttgtgggattgtattaggctcaaccacgatttctaa 39683268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 8018983 - 8019054
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    ||||||| |||||||| |||||| |   ||| |||||||| |||| |||||||||||||| |||||||||||    
T  8018983 aagtgggtgcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaagat 8019054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 16926986 - 16926942
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| ||| || ||||||||||||||||||||||||    
T  16926986 tttgtggggttgtgttaagctcaaccacgatttctaagatggtat 16926942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 19954451 - 19954339
Alignment:
Q  130 atggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtg 229  Q
    ||||||| ||| |||||  ||||||  |||||||| ||||||| ||| ||   ||||| |  |||||||||||||| |||| | |||||||||||||||     
T  19954451 atggtatcagagcctcttcaagatccattgggccatctgctatcaggttttcgctatctgaccacccaccatttatgtccacgaaccaagcccaatagta 19954352  T
Q  230 ctaggcgtgaggg 242  Q
    || | ||||||||    
T  19954351 ctggtcgtgaggg 19954339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 21833399 - 21833439
Alignment:
Q  96 tgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||| |||| ||||||||||||||||||||||| |||||||    
T  21833399 tggggttgtgttaggcccaaccacgatttctaacatggtat 21833439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 47702446 - 47702410
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||| |||| |||||||||||||||||||||||    
T  47702446 tttgtggggttgtgttaggcccaaccacgatttctaa 47702410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 50052576 - 50052540
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||| |||| |||||||||||||||||||||||    
T  50052576 tttgtggggttgtgttaggcccaaccacgatttctaa 50052540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 62 - 312
Target Start/End: Original strand, 35772044 - 35772295
Alignment:
Q  62 aagtgggggcaatccttacctc--aaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    ||||| |||||||||| |||||  ||  ||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||    ||||||  |||    
T  35772044 aagtgtgggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagccttctcaagatccattg 35772143  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
    ||||| ||||||| ||| |||  |||||||| |||||||||||||| |||| | |||||||||||||||||  |  ||||| | ||||||| ||||||||    
T  35772144 ggccatctgctatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgccggttgtgagcgggtgtgtt-aagagtcc 35772242  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataattggagacaatcctt 312  Q
    | ||| || | |||||||||||||  | |||||||||| ||| | ||||||||    
T  35772243 cacatcggataggagatggcctgacaatgtgtttataagtgggggcaatcctt 35772295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 92 - 312
Target Start/End: Complemental strand, 2859664 - 2859445
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||| | |||| |||| ||||||||  |||||||||||||||||||| |||||  ||||||  ||||||||||| |||| ||| |||| ||||||||     
T  2859664 tttgtgaggttgtgttagccccaaccatcatttctaagatggtattagagcctcttcaagatccattgggccaccttctattaggtttctgctatcgggc 2859565  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgt 291  Q
    |||||||||||||| |||| | |||||||||||||||||| | |||||||| | ||| | ||||||||| ||| || | || ||||||||||  | ||||    
T  2859564 cacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggggtgat-aagagtcccacatcggataggtgatggcctgacaatgtgt 2859466  T
Q  292 ttataattggagacaatcctt 312  Q
    |||||| ||| | ||||||||    
T  2859465 ttataagtgggggcaatcctt 2859445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 311
Target Start/End: Complemental strand, 39348421 - 39348173
Alignment:
Q  62 aagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc-tagaagatctgtt 158  Q
    |||||||||||||||| ||||||  || ||| |||||||| |||| ||||||||||| ||||||||||||||||||| ||| |||| |  ||| ||  ||    
T  39348421 aagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaac-acgatttctaagatggtatcagagcctcctccaaggtccatt 39348323  T
Q  159 gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||||||||||||| ||| |||  |||||||  |||||||||||||| |||| | |||||||||||||||||| | ||||| || |||||   |||||||    
T  39348322 gggccacctgctatcaggtttccactatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgacggggtgtg---aagagtc 39348226  T
Q  259 ccgcattggttgggagatggcctgaagaagtgtttataattggagacaatcct 311  Q
    || ||| || | |||||| ||||||  | |||||||||| ||||| |||||||    
T  39348225 ccacatcggataggagatagcctgacaatgtgtttataagtggaggcaatcct 39348173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 297
Target Start/End: Complemental strand, 4113075 - 4112839
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||||||||  || |||||  ||||||  |||    
T  4113075 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcggagcctctccaagatccattg 4112976  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcc 259  Q
     ||||||  |||| ||| |||  |||| ||  |||||||||||||| |||| | ||||||| |||||||||| | |||||||| ||||||| ||||||||    
T  4112975 agccaccatctatcaggtttccgctattggaccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgtt-aagagtcc 4112877  T
Q  260 cgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    | ||| || ||||| |||||||||  | ||||||||||    
T  4112876 cacatcggatgggacatggcctgacaatgtgtttataa 4112839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 26176923 - 26177115
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    ||||| |||||||||| ||||||||   ||| |||||||| |||| |||||||||||| |||||||||||||| ||| ||| |||||  ||||||  |||    
T  26176923 aagtgagggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaaccgcgatttctaagatgatatcagagcctctccaagatccattg 26177022  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||||||| ||  |||  |||||||  ||||||||||||||||||| | |||||| ||||||||||| | ||||| || |||||||||    
T  26177023 ggccacctgctatcagatttccgctatcggaccacccaccatttatatccacgaaccaagtccaatagtgctggtcgtgacggggtgtgttaa 26177115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 63 - 252
Target Start/End: Complemental strand, 25145788 - 25145597
Alignment:
Q  63 agtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgg 160  Q
    ||||||||||||||| |||||| |   |||||||||||| |||| ||||||||||||| ||||||||||||| ||| ||| |||||  ||||||| |||     
T  25145788 agtgggggcaatcctcacctcacaagccggatttgtggggttgtgttaggcccaaccatgatttctaagatgatatcagagcctctccaagatctattga 25145689  T
Q  161 gccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
     ||||||||||| ||| |||   ||||||  ||||||||||| || |||| | | ||||| |||||||||| | |||||||| |||||||||    
T  25145688 cccacctgctatcaggtttccgttatcggaccacccaccattaatgtccacgaatcaagctcaatagtgctggtcgtgagggggtgtgttaa 25145597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 38668172 - 38668332
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||||||| ||| |||||||||||||||| ||| |||||  | ||||  ||||| |||||| ||| ||| |||| |||||||||    
T  38668172 tttgtggggttgtgttaggcccaatcacaatttctaagatggtatcagagcctctccatgatccattgggtcacctgttatcaggtttctgctatcgggt 38668271  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||| | ||||||| |||||| ||||||||||||| |||| | |||||| | |||||||||    
T  38668272 cacctatcatttatgtccatgaaccaagcccaatattgctggtcgtgagtgggtgtgttaa 38668332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 4098471 - 4098306
Alignment:
Q  62 aagtgggggcaatccttacct--caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| ||||  ||| | || |||||||| |||| |||||||||||||||||||||||| |||||| |||  ||||  ||||||  |||    
T  4098471 aagtgggggcaatcctcaccttacaagttggttttgtggg-ttgtgttaggcccaaccacgatttctaagttggtatcagagactcttcaagatccattg 4098373  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaata 226  Q
    |||||||||| || ||| |||| |||||||| |||||||| ||||| |||| | |||||||||||||    
T  4098372 ggccacctgcaatcaggtttctgctatcgggccacccaccctttatgtccacgaaccaagcccaata 4098306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 33156771 - 33156918
Alignment:
Q  83 caaatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacct-ctagaagatctgttgggccacctgctataaggattct 181  Q
    |||| ||| |||||||| |||| ||||||||||||||||||||||||||||||||||| ||| ||  |||||| |||||  |||||||||| ||| |||     
T  33156771 caaaccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtattagagcctactccaagatccgttggttcacctgctatcaggtttcc 33156870  T
Q  182 tctatcgggtcacccaccatttatatccatgcaccaagcccaatagtg 229  Q
     |||||||| || ||||||||||| |||| | | ||||||||||||||    
T  33156871 gctatcgggccatccaccatttatgtccacgaatcaagcccaatagtg 33156918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 30369882 - 30370000
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||||||||||||||||||||||| |||| ||| |||||  ||||||  ||||| |||||||||| ||| |||  ||||||||     
T  30369882 tttgtggggttgtgttaggcccaaccacgatttctaagattgtatcagagcctctccaagatccattgggtcacctgctatcaggtttccactatcgggc 30369981  T
Q  192 cacccaccatttatatcca 210  Q
    |||||||||||||| ||||    
T  30369982 cacccaccatttatgtcca 30370000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 106 - 258
Target Start/End: Complemental strand, 12376696 - 12376544
Alignment:
Q  106 ttaggcccaaccacgatttctaagatggtattagaacctctag-aagatctgttgggccacctgctataaggattcttctatcgggtcacccaccattta 204  Q
    ||||| ||||| |||||||||||| |||||||||| | ||    ||||||  |||||||||||||||| ||| |||| ||||| || |||| ||||||||    
T  12376696 ttaggtccaacgacgatttctaagttggtattagagcatccgttaagatccattgggccacctgctatcagg-ttctgctatcaggccacctaccattta 12376598  T
Q  205 tatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    | |||| | |||||||||||||||| | | ||||||||||||||||||||||||    
T  12376597 tgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtc 12376544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 311
Target Start/End: Original strand, 27413394 - 27413612
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||| | |||| ||||| ||||||||||||||||||||| ||| ||| |||||  ||||||| || | ||||||| ||| ||  |||  ||||||||     
T  27413394 tttgtgaggttgtgttaggtccaaccacgatttctaagatgatatcagagcctctccaagatctattagaccacctgttatcagatttccgctatcgggc 27413493  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgt 291  Q
    |||||||||||||| |||| | | |||||||||||||| | | |||||| | |||||||||| |||||| ||| |  | || ||||||||||  |  |||    
T  27413494 cacccaccatttatgtccacgaatcaagcccaatagtgttggtcgtgagagggtgtgttaaa-agtcccacatcgcataggtgatggcctgacaatatgt 27413592  T
Q  292 ttataattggagacaatcct 311  Q
    |||||| ||||| |||||||    
T  27413593 ttataagtggaggcaatcct 27413612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 8223492 - 8223420
Alignment:
Q  184 tatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagag 256  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| | || ||||||| |||||||||||||    
T  8223492 tatcgagtcacccactatttatatccatgcaccaagcccaatagtgttgggtgtgagggcgtgtgttaaagag 8223420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 51460479 - 51460319
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||||||||||  |||||||| ||| ||| ||| |||||  ||||||  |||||||||||||||| ||| |||  ||||||||     
T  51460479 tttgtggggttgtgttaggcccaaccataatttctaaaatgatatcagagcctctccaagatccattgggccacctgctatcaggtttccgctatcgggc 51460380  T
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
     ||||||||||| | |||| | ||||| | |||| ||||||| ||||||  ||||||||||    
T  51460379 gacccaccatttgtgtccacgaaccaaactcaattgtgctagtcgtgagtatgtgtgttaa 51460319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 12325501 - 12325403
Alignment:
Q  159 gggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtc 258  Q
    |||||||||||||| ||| ||||  ||||||| |||| ||||||||| |||| | |||||||||||||||| | | ||||||||||||||||||||||||    
T  12325501 gggccacctgctatcagg-ttctgttatcgggccacctaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtc 12325403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 161 - 255
Target Start/End: Original strand, 17208670 - 17208764
Alignment:
Q  161 gccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaaga 255  Q
    |||| ||||||| ||| |||  |||||||| |||||||||||||||||||  ||||||||||||||||| | |||||||||| |||||| |||||    
T  17208670 gccatctgctatcaggtttccgctatcgggccacccaccatttatatccacccaccaagcccaatagtgttgggcgtgagggggtgtgtgaaaga 17208764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 16162940 - 16163139
Alignment:
Q  54 gtgttttcaagtgggggcaatccttacctca--aatcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaag 151  Q
    ||||||| |||||||| ||| ||| ||||||  || ||  |||||||| |||| |||| | ||||||| |||| ||||||| ||| | | |||||  |||    
T  16162940 gtgtttttaagtggggacaaacctcacctcataaaccgattttgtggggttgtgttagactcaaccacaatttttaagatgatatcaaagcctctccaag 16163039  T
Q  152 atctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgtta 251  Q
    |||   ||||||||||||||| ||| |||  |||||||| |||| ||||||||| |||| |  |||||||| |||||||| | |||||||||||||||||    
T  16163040 atccaatgggccacctgctatcaggtttccgctatcgggccacctaccatttatgtccacgagccaagccc-atagtgctggtcgtgagggtgtgtgtta 16163138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 252
Target Start/End: Original strand, 38733193 - 38733354
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctat 186  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||||| |||  ||||  ||||||  |||| ||||||||||| ||| |||  ||||    
T  38733193 tcggttttgtgagattgtgttaggttcaaccacgatttctaagatggtatcagagtctctccaagatccattggaccacctgctatcaggtttccgctat 38733292  T
Q  187 cgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |    ||||||||||||||||| | | || ||||||||||||||| | ||||| |  |||||||||    
T  38733293 c----cacccaccatttatatctacgaactaagcccaatagtgctggtcgtgaagaggtgtgttaa 38733354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 252
Target Start/End: Original strand, 35892100 - 35892263
Alignment:
Q  89 ggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcg 188  Q
    ||||||||||| |||| ||| ||||| ||||||||||||||| ||||| |||  ||||  |||||   ||||||||| |||||| |   |||| ||||||    
T  35892100 ggatttgtggggttgtgttaagcccatccacgatttctaagaaggtatcagagtctcttcaagattcattgggccacttgctatcatatttctgctatcg 35892199  T
Q  189 ggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    || |||||||||||||| |||| | |  ||||||||| ||||| | |||||| | |||||||||    
T  35892200 gggcacccaccatttatgtccacgaattaagcccaattgtgctggtcgtgagagggtgtgttaa 35892263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 297
Target Start/End: Original strand, 52961428 - 52961598
Alignment:
Q  126 taagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaat 225  Q
    |||| |||||| ||| |||||  ||||||  |||||||||||||||| ||| |||  |||||||| ||||||||| |||| | || | | ||||| ||||    
T  52961428 taagttggtatcagagcctcttcaagatccattgggccacctgctatcaggtttccgctatcgggccacccaccagttatgtacacgaaacaagctcaat 52961527  T
Q  226 agtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    |||||||| |||||||| ||||||| ||| ||||| ||| || | |||||||| ||||  | ||||||||||    
T  52961528 agtgctagtcgtgagggggtgtgtt-aagtgtcccacatcggataggagatggtctgacaatgtgtttataa 52961598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 11234202 - 11234338
Alignment:
Q  33 gttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||| ||||||||||||||  |||||||| || | || |||||| |   ||| |||||||| |||| |||||||||||||| | || |||||    
T  11234202 gttgggagatggcctgaacaagtgtttataagtggggacagttctcacctcataagccggttttgtggggttgtattaggcccaaccacaaattataaga 11234301  T
Q  131 tggtattagaacct-ctagaagatctgttgggccacc 166  Q
    |||||||||| ||| ||  |||||| |||||||||||    
T  11234302 tggtattagagcctcctccaagatccgttgggccacc 11234338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 20208616 - 20208527
Alignment:
Q  41 atggtctgaacaagtgttttcaagtgggggcaatccttacctcaaatcggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||  | ||||||  |||||||||||||||| |||||| | | | |||||||| |||| |||||||||||||||||||||||||    
T  20208616 atggtctgacaatgtgtttataagtgggggcaatcctcacctcatagccggtttgtggggttgtgttaggcccaaccacgatttctaaga 20208527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 35772254 - 35772350
Alignment:
Q  37 ggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||||||| ||||  | ||||||  ||||||||||||||||||||||| |   ||| |||||||| |||| ||||||||||||||||||||||||||    
T  35772254 ggagatggcctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 35772350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 192 - 297
Target Start/End: Complemental strand, 52676446 - 52676341
Alignment:
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgt 291  Q
    |||||| |||||||||||| ||||||| |||||||||| |  || |||||| | ||||||||||||||| |||||| |  |||||||  |||| ||||||    
T  52676446 cacccatcatttatatccacgcaccaaacccaatagtgatgagcatgagggggggtgttaaagagtcccacattggataagagatggtatgaacaagtgt 52676347  T
Q  292 ttataa 297  Q
    ||||||    
T  52676346 ttataa 52676341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 17452897 - 17452790
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||| | |||||| |   ||| |||||||| |||| ||||||| ||||||||||||||||||||||||||| |||||  || |||  |||    
T  17452897 aagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtattagagcctctctaaaatccattg 17452798  T
Q  160 ggccacct 167  Q
    ||||||||    
T  17452797 ggccacct 17452790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 25713270 - 25713409
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagag 256  Q
    |||||||||||||||| | | |||  |||||||| |||||||||||||| |||| | |||||||||||||||| | | |||||||| | ||||| |||||    
T  25713270 ttgggccacctgctatcaagtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggggtgtt-aagag 25713368  T
Q  257 tcccgcattggttgggagatggcctgaagaagtgtttataa 297  Q
    |||| ||| || | || ||||| ||||  | ||||||||||    
T  25713369 tcccacatcggataggtgatggtctgacaatgtgtttataa 25713409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 51460083 - 51460007
Alignment:
Q  96 tgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctat 172  Q
    |||| |||| |||||||||||||| |||||||||||||||||||  |||||  ||||||  ||||||||||||||||    
T  51460083 tggggttgtgttaggcccaaccacaatttctaagatggtattagcgcctctccaagatccattgggccacctgctat 51460007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 252
Target Start/End: Complemental strand, 4112783 - 4112652
Alignment:
Q  121 atttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagc 220  Q
    |||||||||||||||| ||| |||||  ||||||  |||| ||||||||||| ||| |||  ||||||   |||||||||||||| || | | |||||||    
T  4112783 atttctaagatggtatcagagcctctccaagatccattggaccacctgctatcaggtttccgctatcgaaccacccaccatttatgtcaacgaaccaagc 4112684  T
Q  221 ccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    ||||||||| | | |||||||| | |||||||    
T  4112683 ccaatagtgttggtcgtgagggggggtgttaa 4112652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 11524900 - 11525013
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctg 282  Q
    ||||| || ||||||| ||||||||||| |||||||| | ||||||| | ||| ||| || | ||||||||||||||| ||| ||||| |||||||  ||    
T  11524900 ctatctggccacccactatttatatccacgcaccaagtctaatagtgttgggcatgatgggg-gtgttaaagagtcccacatcggttgagagatggtttg 11524998  T
Q  283 aagaagtgtttataa 297  Q
    || ||||||||||||    
T  11524999 aataagtgtttataa 11525013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 11525115 - 11525228
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctg 282  Q
    ||||| || ||||||| ||||||||||| |||||||| | ||||||| | ||| ||| || | ||||||||||||||| ||| ||||| |||||||  ||    
T  11525115 ctatctggccacccactatttatatccacgcaccaagtctaatagtgttgggcatgatgggg-gtgttaaagagtcccacatcggttgagagatggtttg 11525213  T
Q  283 aagaagtgtttataa 297  Q
    || ||||||||||||    
T  11525214 aataagtgtttataa 11525228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 34264688 - 34264598
Alignment:
Q  162 ccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||| |||||| ||| |||  ||||||||||| |||||||||||||| | | ||||||| |||||||||| | |||||||| |||||||||    
T  34264688 ccacatgctatcaggtttccgctatcgggtcaaccaccatttatatcgacgaaccaagcacaatagtgctggtcgtgagggggtgtgttaa 34264598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 36332543 - 36332602
Alignment:
Q  186 tcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgt 247  Q
    ||||| |||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||    
T  36332543 tcgggccacccaccatttata--catgcagcaagcccaatagtgctaggcgtgagggggtgt 36332602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 7653493 - 7653562
Alignment:
Q  64 gtgggggcaatccttacctca-aatcggattt-gtgggattgttttaggcccaaccacgatttctaagat 131  Q
    ||||||||||||||||||||| || | ||||| |||||||||| |||||||||||||| |||||||||||    
T  7653493 gtgggggcaatccttacctcagaagctgattttgtgggattgtgttaggcccaaccacaatttctaagat 7653562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 260
Target Start/End: Original strand, 11234335 - 11234404
Alignment:
Q  192 cacccaccatttatatcc-atgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtccc 260  Q
    |||||||||||||||||| ||||| ||||||||||| ||| ||||||||||  | |||||||||||||||    
T  11234335 cacccaccatttatatcccatgcagcaagcccaataatgccaggcgtgaggaggggtgttaaagagtccc 11234404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 369775 - 369839
Alignment:
Q  188 gggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||||||| |||| | |||||||||||||||||| | ||||||||  ||||||||    
T  369775 gggtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggatgtgttaa 369839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 5109297 - 5109413
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    ||||||||||||| ||||| ||||  || |||| ||||||||||| |||  ||||  |||||  |||| ||||||| |||| ||| |||   ||||||||    
T  5109297 tttgtgggattgtgttaggtccaattacaatttttaagatggtatcagagtctctccaagattcgttgagccaccttctatcaggtttccattatcgggt 5109396  T
Q  192 cacccaccatttatatc 208  Q
    |||||||||||||||||    
T  5109397 cacccaccatttatatc 5109413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 29266000 - 29266044
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  29266000 tttgtggggttgtgttaggcccaaccacgatttctaagatggtat 29266044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 36332446 - 36332499
Alignment:
Q  186 tcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagg 241  Q
    ||||| |||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  36332446 tcgggccacccaccatttata--catgcagcaagcccaatagtgctaggcgtgagg 36332499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 11234182 - 11234241
Alignment:
Q  247 tgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttataattggagaca 306  Q
    ||||||||||||||  ||| |||||||||||||||||| |||||||||||| ||| ||||    
T  11234182 tgttaaagagtcccatattagttgggagatggcctgaacaagtgtttataagtggggaca 11234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 26177158 - 26177228
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| ||||||||   | | |||||||| |||| |||||||||||||||||||||||||    
T  26177158 aagtgggggcaatcctcacctcaaaaaccagttttgtggggttgtgttaggcccaaccacgatttctaaga 26177228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 40079167 - 40079237
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||||    
T  40079167 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 40189154 - 40189099
Alignment:
Q  195 ccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgtt 250  Q
    |||||||||||||||| |||||||||||||||||| | |  |||||||||||||||    
T  40189154 ccaccatttatatccacgcaccaagcccaatagtgttggatgtgagggtgtgtgtt 40189099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 25255358 - 25255475
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||||||||||||||||||||||| |||| ||| |||||  || ||||  | |  ||| |||||| ||| ||| |||||||  |    
T  25255358 tttgtggggttgtgttaggcccaaccacgatttctaagat-gtatcagatcctcttcaatatctactagatcacatgctattaggtttcatctatcgaat 25255456  T
Q  192 cacccaccatttatatcca 210  Q
    || ||||||||||||||||    
T  25255457 catccaccatttatatcca 25255475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 51589853 - 51589907
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||| ||| |||||    
T  51589853 tttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 51589907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 3169781 - 3169857
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    |||||||||||||| | |||||| |   ||| |||||||| |||| ||||||||||||||||||||||| |||||||    
T  3169781 aagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtat 3169857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 17452748 - 17452680
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    |||||||||||||||| |||||| |   ||| |||||||| |||| |||||||||||||||||||||||    
T  17452748 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 17452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 8870947 - 8870867
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctat 172  Q
    |||||||| |||| ||||| |||||||| |||||||||||||||| |||  ||||  || |||  ||||||||||||||||    
T  8870947 tttgtggggttgtgttaggtccaaccaccatttctaagatggtatcagagtctctccaatatccattgggccacctgctat 8870867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 25145553 - 25145483
Alignment:
Q  63 agtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    ||||||||||||||| |||||| |  |||| |||||| | |||| |||| |||||||||||||||||||||    
T  25145553 agtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttagacccaaccacgatttctaagat 25145483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 41035896 - 41035826
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||||||||||| |||||| |   ||| ||||||||||||| ||||| ||||| |||||||||||||    
T  41035896 aagtgggggcaatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaaga 41035826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 31181606 - 31181512
Alignment:
Q  38 gagatggtctgaacaagtgttttcaagtgggggcaatccttacctca-aatc-ggatttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||| ||||||| ||||||  |||||||||||||||| |||||| || | || ||| |||| |||| |||||||||||||| | ||||||||    
T  31181606 gagatggcctgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttatggggttgtgttaggcccaaccacaaattctaaga 31181512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 42586476 - 42586438
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  42586476 tttgtggggttgtgttaggcccaaccacgatttctaaga 42586438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 51459742 - 51459704
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaaga 130  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  51459742 tttgtgggattgtattaggcccaaccacaatttctaaga 51459704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 10090848 - 10090893
Alignment:
Q  212 gcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagt 257  Q
    ||||||||||||||||||||||||||||| |||  |||| ||||||    
T  10090848 gcaccaagcccaatagtgctaggcgtgagtgtgcatgttgaagagt 10090893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 11524976 - 11525097
Alignment:
Q  26 cacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctca-aatc-ggatttgtgggattgttttaggcccaaccacgatt 123  Q
    ||||| ||||| |||||||| |||| ||||||||  |||  |||||||| || ||| || |||| || |||||| | |||| ||||||||| |||| |||    
T  11524976 cacatcggttgagagatggtttgaataagtgtttataagcaggggcaatgctcaccccacaatccggttttgtgaggttgtgttaggcccatccacaatt 11525075  T
Q  124 tctaagatggtattagaacctc 145  Q
    ||||||||||||| ||| ||||    
T  11525076 tctaagatggtatcagagcctc 11525097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 31432295 - 31432227
Alignment:
Q  66 gggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatg 132  Q
    |||||||||||| |||||| |   ||| |||||||| ||||  ||||||||||||||||||||||||||    
T  31432295 gggggcaatcctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaagatg 31432227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 31496404 - 31496295
Alignment:
Q  96 tgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggtcacc 195  Q
    |||| |||| |||| | ||| ||||||||||||||| ||||||||  ||||  ||||||  |||| ||||||||||| ||| | |  |||||||  ||||    
T  31496404 tggggttgtgttagactcaatcacgatttctaagatagtattagagtctctttaagatccattggaccacctgctatcaggttcccgctatcggaccacc 31496305  T
Q  196 caccatttat 205  Q
    ||||||||||    
T  31496304 caccatttat 31496295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 51589007 - 51589083
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    ||||| |||||||||| |||||| |   ||| |||||||| |||| |||||||||||||| |||||||| |||||||    
T  51589007 aagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaatatggtat 51589083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 51589241 - 51589317
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    ||||| |||||||||| |||||| |   ||| |||||||| |||| ||||||| ||||||||||||||| |||||||    
T  51589241 aagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaatatggtat 51589317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 1247163 - 1247195
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  1247163 tcctcctcaaggtctcaggttcgattctctctg 1247195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 2799912 - 2799944
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  2799912 tcctcctcaaggtctcaggttcgattctctctg 2799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 3265974 - 3266006
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  3265974 tcctcctcaaggtctcaggttcgattctctctg 3266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 3477245 - 3477173
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggatt-tgtgggattgttttaggcccaaccacgatttctaagatg 132  Q
    |||||||||| |||||||||||| || | |||| |||||| |||| |||||| ||| ||||||||||||||||    
T  3477245 aagtgggggcgatccttacctcataacccgattgtgtggggttgtattaggcacaatcacgatttctaagatg 3477173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 4098232 - 4098161
Alignment:
Q  62 aagtgggggcaatccttac--ctcaaatcggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    ||||||||||||||||  |  | |||| ||| |||||| |||||| |||||||||||||| |||||||||||    
T  4098232 aagtgggggcaatcctctcttcacaaaccggttttgtgtgattgtgttaggcccaaccacaatttctaagat 4098161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 5572672 - 5572720
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattaga 140  Q
    |||||||| |||| ||| ||||||| ||||||||||| |||||||||||    
T  5572672 tttgtggggttgtgttaagcccaactacgatttctaaaatggtattaga 5572720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 8870861 - 8870801
Alignment:
Q  192 cacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||| |||| | ||||| |||||| ||||| | |||||||| |||||||||    
T  8870861 cacccaccatttatgtccacgaaccaaacccaattgtgctggtcgtgagggggtgtgttaa 8870801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 9146872 - 9146772
Alignment:
Q  121 atttctaagatggtattagaacct-ctagaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaag 219  Q
    |||||||||||||||| ||| ||| ||  ||||||  |||| ||| |||| |||||| | |  ||||||||||||||||||||||| |||| | ||||||    
T  9146872 atttctaagatggtatcagagccttctccaagatccattggaccaactgcaataaggttaccgctatcgggtcacccaccatttatgtccacgaaccaag 9146773  T
Q  220 c 220  Q
    |    
T  9146772 c 9146772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 33157263 - 33157307
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagat 131  Q
    |||| |||||||| |||| |||||||||| |||||||||||||||    
T  33157263 tcggttttgtggggttgtgttaggcccaatcacgatttctaagat 33157307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 33700799 - 33700767
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  33700799 tcctcctcaaggtctcaggttcgattctctctg 33700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 34600760 - 34600835
Alignment:
Q  162 ccacctgctataaggattcttctatcgggtcacccaccatttata--tccatgcaccaagcccaatagtgctaggc 235  Q
    |||| |||||| ||| |||| |||||||||||||||||| |||||  |||| ||||||| | |||||||| |||||    
T  34600760 ccacttgctattagggttctgctatcgggtcacccaccaattatatgtccacgcaccaaactcaatagtgttaggc 34600835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 40316142 - 40316039
Alignment:
Q  39 agatggtctgaacaagtgttttcaagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtat 136  Q
    ||||| ||| |||| ||||||  |||||||| ||||||| |||||| |   ||| |||||| | |||| ||||  ||||||||||||||||| |||||||    
T  40316142 agatgttctaaacatgtgtttataagtggggtcaatcctcacctcataagccggttttgtgaggttgtgttagatccaaccacgatttctaacatggtat 40316043  T
Q  137 taga 140  Q
    ||||    
T  40316042 taga 40316039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 51590085 - 51590121
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaa 128  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  51590085 tttgtgggattgtgttaggcccaagcacgatttctaa 51590121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 250
Target Start/End: Complemental strand, 5823 - 5633
Alignment:
Q  62 aagtgggggcaatccttacctcaaat--cggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttg 159  Q
    |||||||||||||||| | |||| |   ||| |||| ||| |||| ||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||    
T  5823 aagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattg 5724  T
Q  160 ggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgtt 250  Q
     |||||||||||| ||| |||  |||||||  |||||||||||||| |||| | |||||||||||||||||| | |||||||| |||||||    
T  5723 agccacctgctatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 252
Target Start/End: Original strand, 81884 - 82048
Alignment:
Q  87 tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctat 186  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||  ||||||  |||| | ||||| ||| ||| |||  | ||    
T  81884 tcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattggactacctgttatcaggtttccac-at 81982  T
Q  187 cgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    || | ||| |||||||||| |||||| |||||||||||||||||| | |||||||| |||||||||    
T  81983 cgagccacgcaccatttatgtccatgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 82048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 252
Target Start/End: Original strand, 12664 - 12853
Alignment:
Q  64 gtgggggcaatccttacctcaaa--tcggatttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttggg 161  Q
    |||||||||||||| |||||| |  |||  |||||| | |||| |||||||||||||| |||| ||||||||||||||   ||||  |||||   |||||    
T  12664 gtgggggcaatcctcacctcacaagtcgattttgtgtggttgtgttaggcccaaccacaatttttaagatggtattagcgtctctccaagataaattggg 12763  T
Q  162 ccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||| |||| ||||||   |||||||  |||||||||||||| | || | ||||||| |||||||||| |||||||||| |||||||||    
T  12764 ccacctactatcaggatttcgctatcggaacacccaccatttatgttcacgaaccaagctcaatagtgct-ggcgtgagggggtgtgttaa 12853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 14350 - 14484
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| ||||||||||||||| ||||||||||||||| ||| |||||  ||||||  ||||||||  || ||| ||| |||  ||||||||     
T  14350 tttgtggggttgtgttaggcccaaccacgttttctaagatggtatcagagcctctccaagatccattgggccatatgttatcaggtttccgctatcgggc 14449  T
Q  192 cacccaccatttatatccatgcaccaagcccaata 226  Q
    |||| ||||||||| |||| | | |||||||||||    
T  14450 cacctaccatttatgtccacgaatcaagcccaata 14484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 5702 - 5862
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||| |||||||||||||||||||||||||| ||| |||||  || |||  |||||||||||||||| ||| |||   |||||  |    
T  5702 tttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagcctcttcaaaatccattgggccacctgctatcaggtttccgttatcgaat 5801  T
Q  192 cacccaccatttatatccatgcaccaagccc-aatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||| |||||  ||| | ||||||||| |||| |||| | |||||||| |||||||||    
T  5802 cacccaccgtttatgcccacgaaccaagcccaaataatgctggtcgtgaggg-gtgtgttaa 5862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 3892 - 4003
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||| ||||||| |||||||| ||||||| ||| |||||  ||||||   ||||||||||||||| ||| |||  ||||||||     
T  3892 tttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctctccaagatccactgggccacctgctatcaggtttccgctatcgggc 3991  T
Q  192 cacccaccattt 203  Q
    |||||| |||||    
T  3992 cacccatcattt 4003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 4536 - 4647
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctataaggattcttctatcgggt 191  Q
    |||||||| |||| |||||| ||||||| |||||||| ||||||| ||| |||||  ||||||   ||||||||||||||| ||| |||  ||||||||     
T  4536 tttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctctccaagatccactgggccacctgctatcaggtttccgctatcgggc 4635  T
Q  192 cacccaccattt 203  Q
    |||||| |||||    
T  4636 cacccatcattt 4647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 87781 - 87707
Alignment:
Q  157 ttgggccacctgctataaggattcttctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgct 231  Q
    |||||||||||||||| ||| |||  ||||||||||||||||||||||||||||  || || || ||||||||||    
T  87781 ttgggccacctgctatcaggtttccactatcgggtcacccaccatttatatccacacatcatgctcaatagtgct 87707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 102343 - 102296
Alignment:
Q  163 cacctgctataaggattcttctatcgggtcacccaccatttatatcca 210  Q
    |||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  102343 cacctgctatcaggtttccactatcgggtcacccaccatttatatcca 102296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 14543 - 14612
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||| | | ||||| || |||||||||    
T  14543 ctatcgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgtgttaa 14612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 10877 - 10946
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||| ||||||||||| |||||| |||||| |||||||||||||||| | | ||||| || |||||||||    
T  10877 ctattgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgtgttaa 10946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 41243 - 41163
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctagaagatctgttgggccacctgctat 172  Q
    |||||||| |||| |||||| |||| ||||||||||||||||||| ||| |||||  |||||   ||||||||||||||||    
T  41243 tttgtggggttgtattaggctcaactacgatttctaagatggtatcagagcctctccaagattcattgggccacctgctat 41163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 56506 - 56560
Alignment:
Q  92 tttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctct 146  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||| ||| |||||    
T  56506 tttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 56560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 13236 - 13305
Alignment:
Q  183 ctatcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaa 252  Q
    |||| ||||||||||| |||||| |||||| |||||||||||||||| | | ||||| || |||||||||    
T  13236 ctattgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgtgttaa 13305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 6289 - 6355
Alignment:
Q  62 aagtgggggcaatccttacctca-aatcggattt-gtgggattgttttaggcccaaccacgatttct 126  Q
    |||||||||||||||| |||||| || | ||||| ||||| |||| |||||||||||||||||||||    
T  6289 aagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttct 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 2737 - 2705
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  2737 tcctcctcaaggtctcaggttcgattctctctg 2705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 19988 - 19956
Alignment:
Q  312 tcctcctcaagatctcaggttcgattctctctg 344  Q
    ||||||||||| |||||||||||||||||||||    
T  19988 tcctcctcaaggtctcaggttcgattctctctg 19956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University