View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11421_low_16 (Length: 266)
Name: NF11421_low_16
Description: NF11421
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11421_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 36171068 - 36170827
Alignment:
| Q |
18 |
acctctcactatatagtaatggactaatggtgaatatatatattccaaaccctactagttagacacccattctgaaaacctcattcatttcatgctaaag |
117 |
Q |
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| T |
36171068 |
acctctcactatatagtaatggactaatggtgaatatatatattccaaaccctactagttaggcacccattctgaaaacctcattcatttcatgctaaag |
36170969 |
T |
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| Q |
118 |
agctaataaagttattctaaaaatcaaaatgactcttgagatttcagaatggttccaaaattccatacccaccacaatcttcaccttgtttttcaccttc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36170968 |
agctaataaagttattctaaaaatcaaaatgactcttgagatttcagaatggttccaaaattccatacccaccacaatcttcaccttgtttttcaccttc |
36170869 |
T |
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| Q |
218 |
acacttatcttctccatcttctcattccttatcttcatctca |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
36170868 |
acacttatcttctccatcttctcattccttatcttcatctca |
36170827 |
T |
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