View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11422_high_15 (Length: 322)
Name: NF11422_high_15
Description: NF11422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11422_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 16 - 314
Target Start/End: Complemental strand, 43604702 - 43604404
Alignment:
| Q |
16 |
cacatttcattaggtactgtagaaacaacctttaagatttacccaataaaggcactatatggtacataatcccatcatcgcacccggtaattgttctgta |
115 |
Q |
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| T |
43604702 |
cacatttcattaggtactgtagaaacaacctttaagatttacccaataaaggcactatatggtacataatcccatcatcgcacccagtaattgttctgta |
43604603 |
T |
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| Q |
116 |
tatagacgagtctaggcactattcatactacaccttgtgttgatgtatagaacaaagtatagacctttatcaaatatacaaagcttgattaacagcttct |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43604602 |
tatagacgagtctaggcactattcatactacaccttgtgttgatgtatagaacaaagtatagacctttatcaaatatacaaagcttgattaacagcttct |
43604503 |
T |
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| Q |
216 |
gaattcattccaattgcatcagttaaaattagatttagattagttatgatcagttatgcatgtttttctactaattaattcagttgaattccctttgct |
314 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43604502 |
gaattcattccaattgcatcagttaaaattagatttagattagttatgatcagttatgcatgtttttctactaattaattcagttgaattccctttgct |
43604404 |
T |
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