View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11422_low_21 (Length: 256)
Name: NF11422_low_21
Description: NF11422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11422_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 19 - 244
Target Start/End: Complemental strand, 33617882 - 33617657
Alignment:
| Q |
19 |
atttactgatattggatcgcacaaattggagaactaatatgctgacttcattactagtgccttacattttcttcagctttccagagtccttgtataattt |
118 |
Q |
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| T |
33617882 |
atttactgatattggatcgcacaaattggagaactaatatgctgacttcattactagtgccttacattttcttcagctttccagagtccttgtataattt |
33617783 |
T |
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| Q |
119 |
tttcaggtaatgtttaatagtaatttttcatcatcctcctcttctttcacatttgagttctacactgaaaatttgtcgaaattttttattattttcagag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33617782 |
tttcaggtaatgtttaatagtaatttttcatcatcctcctcttctttcacatttgagttctacactgaaaatttgtcgaaattttttattattttcagag |
33617683 |
T |
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| Q |
219 |
gaggagttggaaaatggtttgctttc |
244 |
Q |
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|||||||||||||||||||||||||| |
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| T |
33617682 |
gaggagttggaaaatggtttgctttc |
33617657 |
T |
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