View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11424_low_4 (Length: 344)
Name: NF11424_low_4
Description: NF11424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11424_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 49042573 - 49042246
Alignment:
| Q |
1 |
ataaagaaagactaacggcggagatggatttcaaagattcaacctccgccgttatcaaaatccggcgacgtttaccggattttctacaaacggtgaaact |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49042573 |
ataaagaaagactaacggcggagatggatttcaaagattcaacctccgccgttatcaaaatccggcgacgtttaccggattttctacaaacggtgaaact |
49042474 |
T |
|
| Q |
101 |
caagtacgtaaagttaggttatggctattcatgcaatgccacaaccattctcattttcacattcgtcgtccctctcttactcttcctcaccgttcagttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49042473 |
caagtacgtaaagttaggttatggctattcatgcaatgccacaaccattctcattttcacattcgtcgtccctctcttactcttcctcaccgttcagttc |
49042374 |
T |
|
| Q |
201 |
caactcaccgatctaaaactccaccgtctctcacaactcttactcgaacacaccgtccaacttgacaccgatacagccatcggttcaatctttctactct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49042373 |
caactcaccgatctaaaactccaccgtctctcacaactcttactcgaacacaccgtccaacttgacaccgatacagccatcggttcaatctttctactct |
49042274 |
T |
|
| Q |
301 |
tcctctttggtctgtactacgcgaaacg |
328 |
Q |
| |
|
|||| ||||||||||||||||| ||||| |
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| T |
49042273 |
tcctttttggtctgtactacgctaaacg |
49042246 |
T |
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