View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11425_high_1 (Length: 817)
Name: NF11425_high_1
Description: NF11425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11425_high_1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 516; Significance: 0; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 249 - 799
Target Start/End: Complemental strand, 1182906 - 1182351
Alignment:
| Q |
249 |
agatgagattttctaggatcattcatgtatctactgctgatacttaccgcaaagcatatatcaggtctgttattgcataggtatctcagagatccaacta |
348 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
1182906 |
agatgagatttcctaggatcattcatgtatctactgatgatacttaccgcaaagcatatatcaggtctgttattgcataggcatctcagagatccaacta |
1182807 |
T |
|
| Q |
349 |
tcggtttgaattatgtagcttctactttctcttcattgctacattcatccagcttagcatttgtttcagaaggatttgtgacagtgttgcaatctgtcat |
448 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1182806 |
tcggtttgaattatgtagcttctactttctcttcattgctacattcatccagcttagcatttgtttcagaaggatttgtgacagtgttgcaatctgtcat |
1182707 |
T |
|
| Q |
449 |
atcaaacttttctagcagttcaccaatgtacttctgatgatgcat-----ttcccatcttgctagctttaaactccattcctcagaaataagagagtttt |
543 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1182706 |
atcaaacttttctagcagttcaccaatgtacttctgatgatgcataacctttcccatcttgctagctttaaactccattcctaagaaataagagagtttt |
1182607 |
T |
|
| Q |
544 |
cctaaatcagtcatttcaaattcacactacattgtgtgtttgaacttctcaatctcactttgattacttccagttaccaatagctcattcacatataatt |
643 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1182606 |
cctaaatcagtcatttcaaattcacactacattgtgtgtttgaacttctcaatctcactttgattacttccagttaccaatagctcattcacatataatt |
1182507 |
T |
|
| Q |
644 |
atatcattgtgatatcactttcactcaagttctgaacatacataccatattcagctttgcatcttttaaatccaatttaaatcaagaactgatcaattca |
743 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1182506 |
atatcattgtgatatcactttcactcaagttctgaacatacataccatattcaactttgcatcttttaaatccaatttaaatcaagaactgatcaattca |
1182407 |
T |
|
| Q |
744 |
tttgttccattctctaggagcctgcttcaatccataaagtgtcttatgcagttcgt |
799 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1182406 |
tttgttccattctctaggagcctgcttcaatccataaagtgtcttatgcagttcgt |
1182351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 62 - 248
Target Start/End: Complemental strand, 1183342 - 1183160
Alignment:
| Q |
62 |
tgtcacttgttccatgatgaaatataacctagtttcaacgtgtttacttcttccatgtgctataggattcttagctagattaatagcttatttgtttgtt |
161 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
1183342 |
tgtcacttgttccatgatgaaatataacctagtttcaacgtgtttacttcttccatgtgctataggattcttagctagattaatagcttatt----tgtt |
1183247 |
T |
|
| Q |
162 |
attaaatttcagcttcaaaggattttccacttcacagtttagctctttcatcactgtatccagccaaattgcttgacaagctgcaaa |
248 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1183246 |
attaaatttcagcttcaaaggattttctacttcacagtttagctctttcatcactgtatccagccaaattgcttgacaagctgcaaa |
1183160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 1183631 - 1183580
Alignment:
| Q |
9 |
gagagagaagaaagtgttagaagtttgttatggttttcattaattaatgaaa |
60 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
1183631 |
gagagagaagaaagtgtttgaagtttgttatggttttcattaattaatgaaa |
1183580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 249 - 784
Target Start/End: Original strand, 32368621 - 32369161
Alignment:
| Q |
249 |
agatgagattttctaggatcattcatgtatctactgctgatacttaccgcaaagcatatatcaggtctgttattgcataggtatctcagagatccaacta |
348 |
Q |
| |
|
||||||||||| || |||||||||||| | |||| | |||||||||| |||||| ||||||| ||| |||| ||||||| ||| ||| ||||| |||| |
|
|
| T |
32368621 |
agatgagatttccttggatcattcatgaacctaccgatgatacttactgcaaaggatatatctggtttgttgttgcataagtacatcaatgatcccacta |
32368720 |
T |
|
| Q |
349 |
tcggtttgaattatgtagcttctactttctcttcattgctacattcatccagcttagcatttgtttcagaaggatttgtgacagtgttgcaatctgtcat |
448 |
Q |
| |
|
|| ||||||||| |||| || |||| | |||||||| |||| ||||||| |||||||||||||||||| ||||| | || ||||||| || |||| |
|
|
| T |
32368721 |
tctgtttgaattcagtaggttttactctttcttcattagtacactcatccaacttagcatttgtttcagatggattcgatgcaatgttgcagtcaatcat |
32368820 |
T |
|
| Q |
449 |
atcaaacttttctagcagttcaccaatgtacttctgatgatgcatttcccatcttg-----ctagctttaaactccattcctcagaaataagagagtttt |
543 |
Q |
| |
|
| |||| |||| |||||||| ||||||||||| || |||||||| | |||| |||| ||| || || | ||| |||||| || ||| || |
|
|
| T |
32368821 |
ttgaaacctttcaagcagttccccaatgtacttttgttgatgcatcactatgcttgaattgctagttttgaattctaatccaaggaaatatgatagtctt |
32368920 |
T |
|
| Q |
544 |
cctaaatcagtcatttcaaattcacactacattgtgtgtttgaacttctcaatctcactttgattacttccagttaccaatagctcattcacatataatt |
643 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
32368921 |
cctaaataagtcatttcaaattcacactgcatagtgtgtttgaacttctcaatctcactttgattacttccagttaccaataggtcatctacatataagc |
32369020 |
T |
|
| Q |
644 |
atatcattgtgatatcactttcactcaagttctgaacatacataccatattcagctttgcatcttttaaatccaatttaaatcaagaactgatcaattca |
743 |
Q |
| |
|
|||||| || || | |||| ||| ||||||||||| || ||||| |||||||||||| | || || ||||||| || | |||||||||||| | |
|
|
| T |
32369021 |
atatcacagttatgttctattcattcagtttctgaacatatattccatactcagctttgcatttcttgaaaccaatttgaagtaggaactgatcaatcct |
32369120 |
T |
|
| Q |
744 |
tttgttccattctctaggagcctgcttcaatccataaagtg |
784 |
Q |
| |
|
||||||||| ||||||| | || ||||| |||||||||| |
|
|
| T |
32369121 |
cttgttccatgctctaggtgtttgtttcaagccataaagtg |
32369161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 304 - 784
Target Start/End: Original strand, 8169014 - 8169495
Alignment:
| Q |
304 |
atatatcaggtctgttattgcataggtatctcagagatccaactatcggtttgaattatgtagcttctactttctcttcattgctacattcatccagctt |
403 |
Q |
| |
|
|||||||||||||| |||| | || |||||| ||||||||||| || | || | | |||||||||||| || ||||| | || ||||||| | ||| |
|
|
| T |
8169014 |
atatatcaggtctgctattccttaagtatcttagagatccaaccatttgattaacctttgtagcttctacattttcttcctcactgaattcatcaaactt |
8169113 |
T |
|
| Q |
404 |
agcatttgtttcagaaggatttgtgacagtgttgcaatctgtcatatcaaacttttctagcagttcaccaatgtacttctgatgatgcat-----ttccc |
498 |
Q |
| |
|
||||||| | ||||| |||||||||| ||| ||||||| || ||||||||| |||| | || |||||||| ||||| || |||||||| |||| |
|
|
| T |
8169114 |
agcatttatctcagatggatttgtgatagtattgcaatttgacatatcaaatctttcatgtagctcaccaatatacttttgttgatgcataactattcct |
8169213 |
T |
|
| Q |
499 |
atcttgctagctttaaactccattcctcagaaa-taagagagttttcctaaatcagtcatttcaaattcacactacattgtgtgtttgaacttctcaatc |
597 |
Q |
| |
|
| |||| ||| ||| || ||||||||| | ||| ||||| | | ||||||| || ||||||| ||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
8169214 |
agcttgatagttttgaattccattcctaaaaaaataagaaaatcttcctaagtcggtcattttaaattcacactgcattgtgtgtttgaatttctcaatc |
8169313 |
T |
|
| Q |
598 |
tcactttgattacttccagttaccaatagctcattcacatataattatatcattgtgatatcactttcactcaagttctgaacatacataccatattcag |
697 |
Q |
| |
|
||||||| ||| ||||||||||| ||||| |||| |||||| ||| |||| |||||||| | |||| | |||||||||||| ||||||||| |||| |
|
|
| T |
8169314 |
tcactttaattgcttccagttactaatagatcatccacata-aat----acattatgatatcagtctcacccgagttctgaacatgcataccatactcag |
8169408 |
T |
|
| Q |
698 |
ctttgcatcttttaaatccaatttaaatcaagaactgatcaattcatttgttccattctctaggagcctgcttcaatccataaagtg |
784 |
Q |
| |
|
||||||||||||| ||||||| || ||||| ||||| ||||||| ||||||||| |||||| ||||| ||| || |||||||||| |
|
|
| T |
8169409 |
ctttgcatcttttgaatccaagttgaatcatgaactagtcaattctcttgttccatgctctagaagcctacttaaagccataaagtg |
8169495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 18641439 - 18641491
Alignment:
| Q |
189 |
cacttcacagtttagctctttcatcactgtatccagccaaattgcttgacaag |
241 |
Q |
| |
|
||||||||| || |||||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
18641439 |
cacttcacacttgagctctttcatcactgaatccagccataatgcttgacaag |
18641491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 32368156 - 32368201
Alignment:
| Q |
87 |
aacctagtttcaacgtgtttacttcttccatgtgctataggattct |
132 |
Q |
| |
|
||||||||||||| ||||||||| || ||||||||||| ||||||| |
|
|
| T |
32368156 |
aacctagtttcaatgtgtttactcctgccatgtgctattggattct |
32368201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 249 - 620
Target Start/End: Complemental strand, 26076352 - 26075976
Alignment:
| Q |
249 |
agatgagattttctaggatcattcatgtatctactgctgatacttaccgcaaagcatatatcaggtctgttattgcataggtatctcagagatccaacta |
348 |
Q |
| |
|
|||||||| || || |||||||||||| |||||||| | |||||||| |||||||||||||| |||||||| ||||||| |||||| || ||||| |||| |
|
|
| T |
26076352 |
agatgagacttccttggatcattcatgaatctactgattatacttactgcaaagcatatatctggtctgttgttgcataagtatcttagtgatcccacta |
26076253 |
T |
|
| Q |
349 |
tcggtttgaattatgtagcttctactttctcttcattgctacattcatccagcttagcatttgtttcagaaggatttgtgacagtgttgcaatctgtcat |
448 |
Q |
| |
|
|| ||||||||| |||| || | || |||||||| ||||||||||| || ||||||||||||||||| ||||||| || | |||||||| |||| |
|
|
| T |
26076252 |
tctgtttgaattcagtagactccgccttttcttcattactacattcatctagtttagcatttgtttcagatggatttgatgcattattgcaatcaatcat |
26076153 |
T |
|
| Q |
449 |
atcaaacttttctagcagttcaccaatgtacttctgatgatgcat-----ttcccatcttgctagctttaaactccattcctcagaaataagagagtttt |
543 |
Q |
| |
|
| ||| |||| |||||||| |||||||||||||| |||||||| | || ||||||| | | ||||| | ||| ||||||||| | | || |
|
|
| T |
26076152 |
ttgaaatctttcaagcagttctccaatgtacttctgttgatgcatcactatgcctgctttgctagttgtgaactcaaatccaaggaaataagataatctt |
26076053 |
T |
|
| Q |
544 |
cctaaatcagtcatttcaaattcacactacattgtgtgtttgaacttctcaatctcactttgattacttccagttac |
620 |
Q |
| |
|
|| ||| ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26076052 |
cccaaaccagtcatttcaaactcacacttcatagtgtgtttgaacttctcaatctcacttggattacttccagttac |
26075976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 5706834 - 5706782
Alignment:
| Q |
189 |
cacttcacagtttagctctttcatcactgtatccagccaaattgcttgacaag |
241 |
Q |
| |
|
||||||||| || |||||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
5706834 |
cacttcacacttgagctctttcatcactgaatccagccataatgcttgacaag |
5706782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 98; Significance: 8e-48; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 264 - 620
Target Start/End: Original strand, 4958602 - 4958963
Alignment:
| Q |
264 |
ggatcattcatgtatctactgctgatacttaccgcaaagcatatatcaggtctgttattgcataggtatctcagagatccaactatcggtttgaattatg |
363 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||| |||||| ||||||||| | |
|
|
| T |
4958602 |
ggatcattcatgaatctactgatgatacttactgcaaagcatatatatggtctgttgttgcataagtatctcaatgatcccactatctgtttgaatttag |
4958701 |
T |
|
| Q |
364 |
tagcttctactttctcttcattgctacattcatccagcttagcatttgtttcagaaggatttgtgacagtgttgcaatctgtcatatcaaacttttctag |
463 |
Q |
| |
|
||| || || || |||||||| || |||||||| || ||||||||||||||||| ||||||| || | |||||||| |||| | ||| |||| || |
|
|
| T |
4958702 |
tagactccaccttttcttcattactgcattcatctagtttagcatttgtttcagatggatttgatgcattattgcaatcaatcatttgaaatatttcaag |
4958801 |
T |
|
| Q |
464 |
cagttcaccaatgtacttctgatgatgcat-----ttcccatcttgctagctttaaactccattcctcagaaataagagagttttcctaaatcagtcatt |
558 |
Q |
| |
|
|||||| |||||||||||||| |||||||| | || ||||||| | | ||||| | ||| |||| |||| | | |||| |||||| ||||| |
|
|
| T |
4958802 |
cagttctccaatgtacttctgctgatgcatcactatgcctgctttgctagttgtgaactcaaatccaaggaaagaagataatcttcccaaatcaatcatt |
4958901 |
T |
|
| Q |
559 |
tcaaattcacactacattgtgtgtttgaacttctcaatctcactttgattacttccagttac |
620 |
Q |
| |
|
||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
4958902 |
tcaaactcacacttcatagtgtgtttgaacttctcaatctcacttggattacttctagttac |
4958963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 761
Target Start/End: Original strand, 4959015 - 4959104
Alignment:
| Q |
672 |
gttctgaacatacataccatattcagctttgcatcttttaaatccaatttaaatcaagaactgatcaattcatttgttccattctctagg |
761 |
Q |
| |
|
|||||| ||||| ||||||||||| ||||||||| |||| |||||||||| || | |||||||||||| | || |||||| ||||||| |
|
|
| T |
4959015 |
gttctggacatatataccatattctgctttgcattttttgaatccaatttgaagtaggaactgatcaatcctcttattccatgctctagg |
4959104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 85; Significance: 4e-40; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 249 - 641
Target Start/End: Complemental strand, 5243161 - 5242769
Alignment:
| Q |
249 |
agatgagattttctaggatcattcatgtatctactgctgatacttaccgcaaagcatatatcaggtctgttattgcataggtatctcagagatccaacta |
348 |
Q |
| |
|
|||||||| || || |||||||||||| |||| || |||||||||| |||||||||||||| ||||| |||| |||| |||||||| | ||| | || |
|
|
| T |
5243161 |
agatgagacttccttggatcattcatgaatcttctaatgatacttactgcaaagcatatatctggtctactattacataagtatctcatgg-tcctatta |
5243063 |
T |
|
| Q |
349 |
tcggtttgaattatgtagcttctactttctcttcattgctacattcatccagcttagcatttgtttcagaaggatttgtgacagtgttgcaatctgtcat |
448 |
Q |
| |
|
|| | |||||| |||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| || ||||||| |||||| ||| |
|
|
| T |
5243062 |
tctgcatgaattcagtaggttctactttctcttcattgatgcattcatctagcttagcatttgtttcagaaggattagttgcagtgttacaatctaccat |
5242963 |
T |
|
| Q |
449 |
atcaaacttttctagcagttcaccaatgtacttctgatgatgcat-----ttcccatcttgctagctttaaactccattcctcagaaataagagagtttt |
543 |
Q |
| |
|
|||||| || |||||||| ||||| ||||| || |||||||| | || | ||||| ||||| || || | ||| |||||| || ||| || |
|
|
| T |
5242962 |
atcaaa----tcaagcagttccccaatatacttttgttgatgcattacaatacctacattgctggctttgaattctaatccaaggaaatatgacagtctt |
5242867 |
T |
|
| Q |
544 |
cctaaatcagtcatttcaaattcacactacattgtgtgtttgaacttctcaatctcactttgattacttccagttaccaatagctcattcacatataa |
641 |
Q |
| |
|
|| ||||||| |||||||||||||||| ||| |||||||||||||| ||||||||| | |||| ||||||| |||||||| |||| |||||||| |
|
|
| T |
5242866 |
ccaaaatcagacatttcaaattcacaccgcatagtgtgtttgaacttttcaatctcattacgattgcttccaggcaccaataggtcatctacatataa |
5242769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 5243601 - 5243516
Alignment:
| Q |
62 |
tgtcacttgttccatgatgaaatataacctagtttcaacgtgtttacttcttccatgtgctataggattcttagctagattaatag |
147 |
Q |
| |
|
||||||||||||| | ||||||| ||||||||||||| |||||| || || ||||||| ||| |||| ||||||| ||| |||| |
|
|
| T |
5243601 |
tgtcacttgttcccttatgaaatgaaacctagtttcaatgtgttttctcctaccatgtgttattagattgttagctaaatttatag |
5243516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 77; Significance: 3e-35; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 249 - 489
Target Start/End: Complemental strand, 12370767 - 12370527
Alignment:
| Q |
249 |
agatgagattttctaggatcattcatgtatctactgctgatacttaccgcaaagcatatatcaggtctgttattgcataggtatctcagagatccaacta |
348 |
Q |
| |
|
|||||||| || || |||||||||||| |||||||| |||||||||| |||||||||||||| |||||| | ||||||| ||||||||| ||||| |||| |
|
|
| T |
12370767 |
agatgagacttccttggatcattcatgcatctactgatgatacttactgcaaagcatatatctggtctgctgttgcataagtatctcagtgatcccacta |
12370668 |
T |
|
| Q |
349 |
tcggtttgaattatgtagcttctactttctcttcattgctacattcatccagcttagcatttgtttcagaaggatttgtgacagtgttgcaatctgtcat |
448 |
Q |
| |
|
| ||||||||| |||| || || || |||||||| || |||||||| || ||||||||||||||||| ||||||| || | |||||||| |||| |
|
|
| T |
12370667 |
tatgtttgaattcagtagactccaccttttcttcattactgcattcatctagtttagcatttgtttcagatggatttgatgcattattgcaatcaatcat |
12370568 |
T |
|
| Q |
449 |
atcaaacttttctagcagttcaccaatgtacttctgatgat |
489 |
Q |
| |
|
| ||| |||| ||||||| |||||||||||||| |||| |
|
|
| T |
12370567 |
ttgaaatctttcaagcagttatccaatgtacttctgctgat |
12370527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 542 - 641
Target Start/End: Complemental strand, 12368411 - 12368312
Alignment:
| Q |
542 |
ttcctaaatcagtcatttcaaattcacactacattgtgtgtttgaacttctcaatctcactttgattacttccagttaccaatagctcattcacatataa |
641 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| || |||||||||||||||| | || ||||| |||||||| |
|
|
| T |
12368411 |
ttcccaaatcagtcatttcaaactcacacttcatagtgtgtttgaacttctcaatctcagttggattacttccagttactagtaagtcatttacatataa |
12368312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 9636687 - 9636620
Alignment:
| Q |
269 |
attcatgtatctactgctgatacttaccgcaaagcatatatcaggtctgttattgcataggtatctca |
336 |
Q |
| |
|
|||||||||||||||| ||| |||| |||||||||| ||||||||| ||||||||| |||||||| |
|
|
| T |
9636687 |
attcatgtatctactggtgaagcttatttcaaagcatatgtcaggtctggtattgcataagtatctca |
9636620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 33717078 - 33717140
Alignment:
| Q |
240 |
agctgcaa-aagatgagattttctaggatcattcatgtatctactgctgatacttaccgcaaa |
301 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||||||||||||| || |||||||||| ||||| |
|
|
| T |
33717078 |
agctgcaataagattagattttcacggatcattcatgtatctattgatgatacttactgcaaa |
33717140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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