View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11425_high_15 (Length: 235)
Name: NF11425_high_15
Description: NF11425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11425_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 43 - 220
Target Start/End: Complemental strand, 37307097 - 37306920
Alignment:
| Q |
43 |
aatttgcacccccttgtgattatggtgctagttgtagctaaacccaatctcatttcctgcaactttccatctcttaaaaccaaaaaatcaattcaacccc |
142 |
Q |
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| T |
37307097 |
aatttgcacccccttgtgattatggtgctagttgtagctaaacccaatctcatttcctgcaactttccatctcttaaaaccaaaaaatcaattcaacccc |
37306998 |
T |
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| Q |
143 |
acagaacagtagtggcctcgggatgttgttgcagattaagttcctttaaacctttagtagcaatgaaaaccccctttg |
220 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37306997 |
acataacagtagtggcctcgggatgttgttgcagattaagttcctttaaacctttagtagcaatgaaaaccccttttg |
37306920 |
T |
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