View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11426_high_12 (Length: 464)
Name: NF11426_high_12
Description: NF11426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11426_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 14 - 454
Target Start/End: Original strand, 12984344 - 12984777
Alignment:
| Q |
14 |
aaaagaatgttaactagcataaaattgttatctatttaaggccatgcatgtgtctgtttatcnnnnnnntactatacatgtatcttctttatggtagcta |
113 |
Q |
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| T |
12984344 |
aaaagaatgttaactagcataaaattgttatctatttaaggccatgcatgtgtctgtttatcaaaaaaatactatacatgtatcttctttatggtagcta |
12984443 |
T |
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| Q |
114 |
ctagctagctggtggtggtggaaaatggtgaagcaacaattatctgacatgatgtggccatatatcttcatcnnnnnnngacataaaagttttcttgaac |
213 |
Q |
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| T |
12984444 |
ctagctagctggtggtgatggaaaatggtgaagcaacaattatctgacatgatgtggccatatatcttcatcaaaaaaagacataaaagttttcttgaac |
12984543 |
T |
|
| Q |
214 |
tgaataattaattccacttgaaccaataagggtgattcaaacttgaaagataagcatcttaacatagtacgagtatcatctcaatgtgaagaagcttttg |
313 |
Q |
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| T |
12984544 |
tgaataattaattccacttgaaccaataagggtga-------ttgaaagataagcatcttaacatagtactagtatcatctcaatgtgaagaagcttttg |
12984636 |
T |
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| Q |
314 |
gggagccaattatggtttaccaccaaataattaattccattatttaaccagataaaactgacacagaatctttacatatagtactagtaagttttcctaa |
413 |
Q |
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| T |
12984637 |
gggagccaattatggtttaccaccaaataattaattccattatttaaccagataaaactgacacagaatctttacatatagtactagtaagttttcctaa |
12984736 |
T |
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| Q |
414 |
actagactacagtagtagtgttgaaatgtactcaacctatg |
454 |
Q |
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| T |
12984737 |
actagactatagaagtagtgttgaaatgtactcaacctatg |
12984777 |
T |
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