View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11426_high_59 (Length: 220)

Name: NF11426_high_59
Description: NF11426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11426_high_59
NF11426_high_59
[»] chr5 (29 HSPs)
chr5 (1-188)||(35920773-35920960)
chr5 (5-171)||(14211355-14211521)
chr5 (5-171)||(2979100-2979266)
chr5 (5-169)||(39567398-39567562)
chr5 (12-171)||(28540700-28540859)
chr5 (12-170)||(19103262-19103420)
chr5 (22-184)||(13007374-13007525)
chr5 (22-116)||(14082245-14082339)
chr5 (22-116)||(34945538-34945632)
chr5 (22-116)||(24229633-24229727)
chr5 (22-116)||(25980302-25980396)
chr5 (22-116)||(38597942-38598036)
chr5 (22-116)||(9113574-9113668)
chr5 (11-116)||(8096347-8096452)
chr5 (5-97)||(8088080-8088172)
chr5 (32-92)||(11192534-11192594)
chr5 (22-114)||(26825575-26825667)
chr5 (35-115)||(34881886-34881966)
chr5 (5-97)||(37985981-37986073)
chr5 (22-176)||(19121057-19121211)
chr5 (32-117)||(11867804-11867889)
chr5 (20-112)||(26877962-26878053)
chr5 (20-87)||(41630645-41630712)
chr5 (20-98)||(7036362-7036439)
chr5 (35-113)||(15571076-15571154)
chr5 (35-116)||(10332396-10332477)
chr5 (131-184)||(10723004-10723057)
chr5 (136-184)||(8984781-8984829)
chr5 (35-115)||(16981461-16981541)
[»] chr3 (55 HSPs)
chr3 (13-184)||(53508362-53508529)
chr3 (5-171)||(7546743-7546910)
chr3 (5-175)||(16235554-16235724)
chr3 (3-171)||(21289608-21289776)
chr3 (5-171)||(8914840-8915006)
chr3 (6-164)||(42460878-42461036)
chr3 (5-171)||(51923855-51924021)
chr3 (15-171)||(27706020-27706176)
chr3 (16-184)||(41818354-41818522)
chr3 (4-163)||(27856292-27856451)
chr3 (22-113)||(4711627-4711718)
chr3 (5-184)||(628716-628883)
chr3 (32-182)||(3085085-3085234)
chr3 (22-116)||(6954545-6954639)
chr3 (22-116)||(44959822-44959916)
chr3 (5-128)||(51303480-51303603)
chr3 (5-116)||(53807707-53807818)
chr3 (22-116)||(40556847-40556941)
chr3 (22-116)||(48650583-48650677)
chr3 (5-184)||(50194128-50194295)
chr3 (5-66)||(7792086-7792147)
chr3 (12-113)||(33580015-33580116)
chr3 (12-116)||(45568294-45568398)
chr3 (22-116)||(9797383-9797477)
chr3 (21-71)||(26275713-26275763)
chr3 (22-116)||(40487470-40487564)
chr3 (12-66)||(44805164-44805218)
chr3 (22-116)||(52922966-52923060)
chr3 (35-116)||(35175562-35175643)
chr3 (22-114)||(9998612-9998704)
chr3 (22-114)||(10108381-10108473)
chr3 (22-114)||(10229621-10229713)
chr3 (13-165)||(38142661-38142815)
chr3 (22-97)||(38859980-38860055)
chr3 (5-184)||(52115797-52115981)
chr3 (22-112)||(10233215-10233305)
chr3 (22-116)||(21533658-21533752)
chr3 (5-114)||(12946818-12946927)
chr3 (35-115)||(44907229-44907309)
chr3 (22-114)||(46304371-46304463)
chr3 (20-116)||(54149134-54149230)
chr3 (20-115)||(21313179-21313274)
chr3 (53-136)||(24175960-24176043)
chr3 (7-66)||(29922187-29922246)
chr3 (7-66)||(29971340-29971399)
chr3 (53-116)||(31271681-31271744)
chr3 (73-128)||(51487278-51487333)
chr3 (15-170)||(14859628-14859777)
chr3 (20-66)||(19619856-19619902)
chr3 (22-116)||(21431758-21431852)
chr3 (35-115)||(25162600-25162680)
chr3 (39-115)||(30648549-30648625)
chr3 (35-115)||(32607633-32607713)
chr3 (32-116)||(32701646-32701730)
chr3 (32-116)||(43017043-43017127)
[»] chr8 (47 HSPs)
chr8 (5-182)||(43833777-43833954)
chr8 (12-171)||(18890491-18890650)
chr8 (5-171)||(42046352-42046518)
chr8 (5-170)||(41896648-41896812)
chr8 (3-184)||(8867934-8868118)
chr8 (12-171)||(14585815-14585974)
chr8 (12-184)||(34609974-34610146)
chr8 (22-116)||(16928604-16928698)
chr8 (5-176)||(15344439-15344600)
chr8 (5-176)||(15433504-15433665)
chr8 (5-176)||(15524808-15524969)
chr8 (5-112)||(29617125-29617232)
chr8 (23-116)||(33347368-33347461)
chr8 (12-116)||(7198042-7198146)
chr8 (22-184)||(30568111-30568262)
chr8 (22-114)||(31013457-31013549)
chr8 (22-104)||(37971431-37971513)
chr8 (13-184)||(470937-471116)
chr8 (22-98)||(23230791-23230867)
chr8 (22-116)||(7883088-7883182)
chr8 (47-116)||(8412369-8412438)
chr8 (35-115)||(27746945-27747025)
chr8 (11-66)||(28086709-28086765)
chr8 (32-115)||(3673599-3673682)
chr8 (5-114)||(1236546-1236655)
chr8 (5-66)||(5333560-5333621)
chr8 (39-184)||(34493167-34493312)
chr8 (20-141)||(41060085-41060206)
chr8 (5-97)||(27110331-27110423)
chr8 (20-112)||(45445662-45445754)
chr8 (22-117)||(33214517-33214612)
chr8 (22-116)||(7677130-7677224)
chr8 (22-116)||(10377837-10377931)
chr8 (138-176)||(12654326-12654364)
chr8 (20-66)||(28897855-28897901)
chr8 (106-184)||(31720634-31720712)
chr8 (5-66)||(1239294-1239355)
chr8 (131-184)||(17693403-17693456)
chr8 (12-116)||(24099103-24099201)
chr8 (131-184)||(40618863-40618916)
chr8 (35-115)||(4809138-4809218)
chr8 (22-66)||(9637306-9637350)
chr8 (36-116)||(14544742-14544822)
chr8 (22-66)||(20553138-20553182)
chr8 (13-116)||(21237929-21238030)
chr8 (140-176)||(34680671-34680707)
chr8 (35-115)||(44099766-44099846)
[»] chr4 (50 HSPs)
chr4 (3-184)||(6155001-6155185)
chr4 (12-176)||(36161867-36162031)
chr4 (5-171)||(18935931-18936097)
chr4 (4-184)||(9714058-9714237)
chr4 (5-171)||(36194857-36195023)
chr4 (5-171)||(27652093-27652258)
chr4 (5-175)||(31891073-31891247)
chr4 (3-177)||(37465629-37465794)
chr4 (22-116)||(35348473-35348567)
chr4 (12-116)||(2520935-2521039)
chr4 (5-171)||(1621305-1621469)
chr4 (13-176)||(43853600-43853763)
chr4 (22-184)||(22611349-22611507)
chr4 (4-116)||(29960798-29960910)
chr4 (4-116)||(36204228-36204340)
chr4 (12-183)||(42032311-42032482)
chr4 (5-116)||(47320261-47320372)
chr4 (22-116)||(56040495-56040589)
chr4 (73-164)||(33332391-33332482)
chr4 (22-112)||(19853365-19853455)
chr4 (22-116)||(43510362-43510456)
chr4 (22-116)||(53811194-53811287)
chr4 (140-184)||(35395456-35395500)
chr4 (5-113)||(51888063-51888171)
chr4 (12-176)||(52933738-52933902)
chr4 (21-184)||(9048829-9048991)
chr4 (22-112)||(9178519-9178609)
chr4 (20-66)||(29120278-29120324)
chr4 (22-116)||(32766680-32766774)
chr4 (20-66)||(45418676-45418722)
chr4 (22-112)||(48257485-48257575)
chr4 (11-116)||(33921209-33921314)
chr4 (17-89)||(36184692-36184764)
chr4 (22-114)||(56156493-56156585)
chr4 (73-156)||(22038618-22038701)
chr4 (91-158)||(48351001-48351068)
chr4 (21-95)||(7008421-7008494)
chr4 (80-158)||(7393422-7393500)
chr4 (20-66)||(22305520-22305566)
chr4 (21-115)||(26090760-26090854)
chr4 (54-156)||(55656586-55656688)
chr4 (11-116)||(13634270-13634375)
chr4 (131-184)||(21662701-21662754)
chr4 (131-184)||(21671465-21671518)
chr4 (32-97)||(35395523-35395588)
chr4 (131-184)||(45418758-45418811)
chr4 (35-115)||(2115418-2115498)
chr4 (35-115)||(9528707-9528787)
chr4 (12-116)||(21686091-21686195)
chr4 (17-113)||(52060775-52060871)
[»] chr2 (54 HSPs)
chr2 (13-171)||(10237011-10237169)
chr2 (13-184)||(14955676-14955847)
chr2 (5-170)||(3309084-3309249)
chr2 (3-156)||(28533764-28533917)
chr2 (12-171)||(6358676-6358835)
chr2 (22-176)||(12553970-12554125)
chr2 (12-113)||(1421822-1421922)
chr2 (13-184)||(19595681-19595856)
chr2 (92-184)||(14416381-14416473)
chr2 (5-116)||(10929804-10929915)
chr2 (22-116)||(7646634-7646728)
chr2 (22-116)||(18763624-18763718)
chr2 (5-170)||(37416849-37417013)
chr2 (32-116)||(31788622-31788706)
chr2 (20-184)||(34128466-34128630)
chr2 (12-116)||(36692020-36692124)
chr2 (6-170)||(41694761-41694924)
chr2 (22-113)||(27097260-27097351)
chr2 (33-116)||(35220495-35220578)
chr2 (22-116)||(4100492-4100585)
chr2 (22-116)||(4778909-4779003)
chr2 (20-114)||(4903997-4904091)
chr2 (22-112)||(38445322-38445412)
chr2 (21-184)||(37876399-37876551)
chr2 (15-91)||(7604325-7604401)
chr2 (32-164)||(18107552-18107684)
chr2 (12-116)||(24461589-24461693)
chr2 (32-116)||(29173567-29173651)
chr2 (128-175)||(10792712-10792759)
chr2 (5-116)||(17248997-17249108)
chr2 (21-116)||(29279420-29279515)
chr2 (12-97)||(37994430-37994515)
chr2 (91-171)||(3465560-3465640)
chr2 (35-115)||(9986172-9986252)
chr2 (34-114)||(19062199-19062279)
chr2 (35-115)||(21570238-21570318)
chr2 (106-165)||(3460526-3460585)
chr2 (10-97)||(30399898-30399985)
chr2 (138-177)||(32197534-32197573)
chr2 (22-116)||(5427719-5427813)
chr2 (22-116)||(7677723-7677817)
chr2 (22-116)||(11985083-11985177)
chr2 (32-184)||(25508861-25509002)
chr2 (138-184)||(32448410-32448456)
chr2 (22-112)||(33585589-33585679)
chr2 (32-66)||(41327905-41327939)
chr2 (35-116)||(8806037-8806118)
chr2 (89-170)||(14423552-14423633)
chr2 (23-144)||(17151581-17151702)
chr2 (22-115)||(43396970-43397062)
chr2 (35-115)||(4228294-4228374)
chr2 (15-107)||(32190813-32190905)
chr2 (138-182)||(39284341-39284385)
chr2 (136-176)||(44044040-44044080)
[»] chr6 (39 HSPs)
chr6 (5-175)||(30776793-30776963)
chr6 (4-171)||(8102855-8103022)
chr6 (12-170)||(14801964-14802123)
chr6 (5-165)||(546161-546321)
chr6 (53-183)||(679286-679416)
chr6 (12-116)||(3913423-3913527)
chr6 (32-116)||(32060033-32060117)
chr6 (12-158)||(9380160-9380306)
chr6 (12-141)||(26588296-26588425)
chr6 (22-114)||(9341502-9341594)
chr6 (12-116)||(30493669-30493773)
chr6 (22-112)||(606351-606441)
chr6 (5-66)||(528249-528310)
chr6 (5-136)||(29743127-29743261)
chr6 (101-184)||(31851673-31851756)
chr6 (22-116)||(23128765-23128859)
chr6 (23-116)||(20225999-20226092)
chr6 (23-116)||(22119983-22120076)
chr6 (22-114)||(67852-67944)
chr6 (6-70)||(32191625-32191689)
chr6 (22-114)||(33053019-33053111)
chr6 (35-114)||(7976038-7976117)
chr6 (5-116)||(31296950-31297061)
chr6 (5-66)||(1523538-1523599)
chr6 (15-116)||(28981317-28981418)
chr6 (35-115)||(25064403-25064483)
chr6 (21-112)||(30608368-30608459)
chr6 (12-116)||(32327069-32327170)
chr6 (73-154)||(6957339-6957420)
chr6 (83-176)||(10084941-10085034)
chr6 (35-116)||(29319726-29319807)
chr6 (131-184)||(33052960-33053013)
chr6 (35-115)||(4984397-4984477)
chr6 (35-115)||(8027948-8028028)
chr6 (35-115)||(12059603-12059683)
chr6 (35-115)||(17237116-17237196)
chr6 (32-116)||(21426535-21426619)
chr6 (20-116)||(29255295-29255391)
chr6 (128-184)||(29744477-29744533)
[»] chr1 (46 HSPs)
chr1 (5-171)||(48750317-48750483)
chr1 (12-171)||(36775504-36775663)
chr1 (13-171)||(16161968-16162127)
chr1 (5-134)||(34412923-34413052)
chr1 (12-116)||(7337512-7337616)
chr1 (5-116)||(19061041-19061152)
chr1 (5-116)||(44543404-44543515)
chr1 (21-112)||(51373711-51373802)
chr1 (5-146)||(14489404-14489545)
chr1 (17-98)||(32873731-32873812)
chr1 (4-116)||(24583277-24583389)
chr1 (5-184)||(13075437-13075615)
chr1 (13-116)||(49627053-49627156)
chr1 (22-116)||(31919138-31919232)
chr1 (11-104)||(13144673-13144766)
chr1 (40-116)||(12635337-12635413)
chr1 (4-116)||(24583081-24583193)
chr1 (12-116)||(35484240-35484344)
chr1 (12-184)||(50616456-50616628)
chr1 (12-184)||(50624283-50624455)
chr1 (22-105)||(5983985-5984068)
chr1 (5-116)||(47133035-47133146)
chr1 (22-116)||(4413263-4413357)
chr1 (22-116)||(11462331-11462425)
chr1 (20-114)||(15431517-15431611)
chr1 (22-116)||(21687527-21687621)
chr1 (22-112)||(31984310-31984400)
chr1 (22-116)||(34878127-34878221)
chr1 (22-116)||(45415707-45415801)
chr1 (22-111)||(7836650-7836739)
chr1 (139-184)||(15836273-15836318)
chr1 (22-113)||(16989520-16989611)
chr1 (82-169)||(25564207-25564294)
chr1 (20-115)||(27579978-27580073)
chr1 (22-116)||(10776310-10776404)
chr1 (22-104)||(14872788-14872870)
chr1 (119-185)||(31692247-31692313)
chr1 (12-110)||(34529213-34529311)
chr1 (108-182)||(40163224-40163298)
chr1 (32-66)||(45789700-45789734)
chr1 (131-184)||(39888429-39888482)
chr1 (35-115)||(9687035-9687115)
chr1 (12-112)||(31317875-31317975)
chr1 (131-187)||(36894197-36894253)
chr1 (5-53)||(41994559-41994607)
chr1 (35-115)||(51872034-51872114)
[»] scaffold0888 (1 HSPs)
scaffold0888 (5-184)||(1460-1638)
[»] chr7 (48 HSPs)
chr7 (5-171)||(35133078-35133244)
chr7 (5-171)||(48930838-48931004)
chr7 (32-184)||(11343967-11344119)
chr7 (34-144)||(25255387-25255497)
chr7 (15-164)||(46822544-46822692)
chr7 (22-176)||(34899407-34899550)
chr7 (22-116)||(40993305-40993399)
chr7 (22-116)||(48316661-48316755)
chr7 (84-184)||(25068267-25068367)
chr7 (5-128)||(22743075-22743198)
chr7 (22-116)||(39171439-39171533)
chr7 (5-106)||(9449996-9450097)
chr7 (12-113)||(48061560-48061661)
chr7 (12-164)||(28476364-28476516)
chr7 (12-116)||(45349648-45349752)
chr7 (101-184)||(3876033-3876116)
chr7 (22-116)||(8001395-8001489)
chr7 (20-114)||(9977061-9977155)
chr7 (118-184)||(11654044-11654110)
chr7 (22-116)||(28407767-28407861)
chr7 (23-176)||(31481887-31482041)
chr7 (22-116)||(42978758-42978852)
chr7 (22-116)||(47590459-47590553)
chr7 (6-71)||(24069288-24069353)
chr7 (100-184)||(4999810-4999894)
chr7 (20-116)||(12141156-12141253)
chr7 (22-87)||(13796807-13796872)
chr7 (5-66)||(35665034-35665095)
chr7 (21-66)||(46244151-46244196)
chr7 (35-115)||(1485086-1485166)
chr7 (22-110)||(19297018-19297106)
chr7 (12-116)||(28044605-28044709)
chr7 (20-112)||(46700181-46700272)
chr7 (20-115)||(29617550-29617644)
chr7 (22-113)||(30756671-30756762)
chr7 (138-184)||(3222897-3222943)
chr7 (106-176)||(14046504-14046574)
chr7 (106-176)||(14356534-14356604)
chr7 (138-184)||(20083594-20083640)
chr7 (138-176)||(24610059-24610097)
chr7 (35-113)||(35261464-35261542)
chr7 (22-116)||(37837307-37837401)
chr7 (20-98)||(38798927-38799005)
chr7 (5-71)||(49148009-49148075)
chr7 (82-153)||(969284-969352)
chr7 (32-93)||(27341708-27341769)
chr7 (35-87)||(17499539-17499591)
chr7 (35-87)||(17553623-17553675)
[»] scaffold0445 (1 HSPs)
scaffold0445 (12-116)||(1480-1584)
[»] scaffold0021 (2 HSPs)
scaffold0021 (100-184)||(4370-4454)
scaffold0021 (13-65)||(4309-4361)
[»] scaffold0039 (1 HSPs)
scaffold0039 (5-176)||(93236-93406)
[»] scaffold0127 (1 HSPs)
scaffold0127 (22-116)||(15638-15732)
[»] scaffold0049 (1 HSPs)
scaffold0049 (32-116)||(71149-71233)
[»] scaffold0603 (1 HSPs)
scaffold0603 (23-176)||(7862-8016)
[»] scaffold0088 (1 HSPs)
scaffold0088 (22-104)||(50922-51004)
[»] scaffold0884 (1 HSPs)
scaffold0884 (12-116)||(1822-1926)
[»] scaffold0050 (1 HSPs)
scaffold0050 (22-104)||(65903-65985)
[»] scaffold0026 (1 HSPs)
scaffold0026 (22-116)||(71719-71813)
[»] scaffold0017 (1 HSPs)
scaffold0017 (20-114)||(32598-32692)
[»] scaffold0347 (1 HSPs)
scaffold0347 (5-98)||(6159-6252)
[»] scaffold0136 (2 HSPs)
scaffold0136 (21-97)||(34630-34706)
scaffold0136 (22-116)||(9891-9985)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-116)||(57937-58048)


Alignment Details
Target: chr5 (Bit Score: 164; Significance: 8e-88; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 35920960 - 35920773
Alignment:
Q  1 tcgatattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacac 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35920960 tcgatattctagtgattttgattttatcatattatttgtaggcattttgtcattgtatgctattaaatttggtgttgtaaatttgtttgcagattcacac 35920861  T
Q  101 tttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgtgaag 188  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  35920860 tttatgtttttagcgacattgatcatgtgattgtatctgatgtattatatcaatttgattgaatgaatatcattttccttttgtgaag 35920773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 14211355 - 14211521
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||||||||||    |||||||||||||| || | |||||| | |||||| |||||||||| || ||    
T  14211355 tattctggtgatttagatttcatcatattatttgtaggcatttttctgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctata 14211454  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
     ||||||||||| ||||||||||  ||||| | ||||||||||||||||||||| ||||| ||||||    
T  14211455 cgtttttagcgatattgatcatgctattgtctatgatgtattatatcaatttgaatgaatgaatatc 14211521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 2979266 - 2979100
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  ||||||||||||||| || | |||||||||||||| || | |||||| | |||||| |||||||||| || ||    
T  2979266 tattctggtgatttagatttcatcatattatttgtaggcattgtgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctata 2979167  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
      |||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| | ||| ||||||    
T  2979166 catttttagcgatattgatcatgttattgtttctgatgtattctatcaatttgaataaatgaatatc 2979100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 39567398 - 39567562
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||| ||||||||| ||||||| |||||  || | |||||| | |||||| | ||||||||  | ||    
T  39567398 tattctggtgatttagatttcatcatattatttgtagacattttgtcgttgtatgttattaccttgggtgttgtgagtttgttcgtagattcaccatata 39567497  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaata 169  Q
     |||||||| || ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||    
T  39567498 cgtttttagtgatattgatcatgttattgtctttgatgtattatatcaatttgaatgaatgaata 39567562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 28540859 - 28540700
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||| ||||  |||||||||| ||||||  | |||||||||||||| || | || ||| | |||||| |||||||||| || || ||||||    
T  28540859 gtgatttagatttcatcatattatttgtagacatttttccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgttttt 28540760  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    ||||| ||||||||||| ||||| ||||||||||| ||||||||| | ||||| ||||||    
T  28540759 agcgatattgatcatgttattgtctttgatgtattttatcaatttaaatgaatgaatatc 28540700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 19103420 - 19103262
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||| ||||  |||||| ||||||||||  | |||||||||||||| |||| || | | | |||||| |||||||||  || || ||||||    
T  19103420 gtgatttagatttcatcatattatttataggcatttttccgttgtatgctattaactttggtgctatgagtttgttcgcagattcatcctatacgttttt 19103321  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatat 170  Q
    ||||| ||||||||||| ||||| | ||||||||| ||||||||||| |||||||||||    
T  19103320 agcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaataaatat 19103262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 13007374 - 13007525
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattg 121  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | ||||||||||||||||| ||||| |||||||||||         
T  13007374 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcga----- 13007468  T
Q  122 atcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
          || |||||||||||||| | ||||||||||| ||||| |||||| ||||| ||||||    
T  13007469 ------tgtttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgt 13007525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 14082339 - 14082245
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| || | || ||  | |||||| |||||||||| |||||||||||||||||    
T  14082339 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttcgatgatgggagtttgttcgcagattcaccctttatgtttttagcga 14082245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 34945538 - 34945632
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||| ||||||||||||| |||||||||||||| || | |||||| | |||||| |||||||||| ||||| |||||||||||    
T  34945538 ttttatcatattatttataggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga 34945632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 24229727 - 24229633
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||| ||||| |||||||||||    
T  24229727 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcactctttacgtttttagcga 24229633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 25980302 - 25980396
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | || ||||||||||| || | || ||| | ||||||||||||||||| ||||| |||||||||||    
T  25980302 ttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgatgtgagtttgtttgcagattcaccctttacgtttttagcga 25980396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 38597942 - 38598036
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||| |||||| ||||| |||||||||||    
T  38597942 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctttacgtttttagcga 38598036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 9113668 - 9113574
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||  | |||||||||||||| || | |||| | | |||||| |||||||||| ||||| |||||||||||    
T  9113668 ttttatcatattatttgtaggcatttttccgttgtatgctattaacttgggtgttctgagtttgttcgcagattcaccctttacgtttttagcga 9113574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 8096452 - 8096347
Alignment:
Q  11 agtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttt 110  Q
    |||||||| | ||||||||  |||||||||||||||||| |||| ||||||||||| || | || ||| | |||||| ||| |||||| |||||  ||||    
T  8096452 agtgatttaggttttatcatattatttgtaggcattttgccattttatgctattaacttgggtggtgtgagtttgttcgcaaattcaccctttacatttt 8096353  T
Q  111 tagcga 116  Q
    ||||||    
T  8096352 tagcga 8096347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 8088172 - 8088080
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattca 97  Q
    |||||| ||||||| |||| |||||  |||||||||||||||||| | |||||||||||||| || | |||| | | |||||| |||||||||    
T  8088172 tattctggtgatttagattatatcatattatttgtaggcattttgcctttgtatgctattaacttgggtgttatgagtttgttcgcagattca 8088080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 11192534 - 11192594
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcag 92  Q
    ||||||||| |||||||||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  11192534 ttatttgtaagcattttgtcgttgtatgttattaactttgatgttgtaaatttgttggcag 11192594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 26825575 - 26825667
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| | |||||||| ||||| |||||||||    
T  26825575 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagc 26825667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 34881886 - 34881966
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| || | || ||||||||||| || | |||||| | ||||||||||||||||  ||||||||||||||||    
T  34881886 tttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtttgcagattcatcctttatgtttttagcg 34881966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 37986073 - 37985981
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattca 97  Q
    |||| |||||| || || |||||||| |||||||||| ||||||||| |||||||||||||| ||   || ||| | ||||||||||||||||    
T  37986073 tattttagtgacttagaatttatcacattatttgtagacattttgtcgttgtatgctattaacttgaatgatgtgagtttgtttgcagattca 37985981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 19121057 - 19121211
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattg 121  Q
    ||||||||  |||||||||| | |||||   ||||||| |||||| || | || ||| | |||||| |||||||||| ||||| ||||| || ||  |||    
T  19121057 ttttatcatattatttgtagacgttttgctcttgtatgatattaatttggatgatgtgagtttgttcgcagattcaccctttacgttttcagagatgttg 19121156  T
Q  122 atcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
      ||||| ||||||| ||||||| | ||||||||||| ||||| ||||| |||||    
T  19121157 gacatgttattgtatctgatgtagtttatcaatttgaatgaatgaatataatttt 19121211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 11867804 - 11867889
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgac 117  Q
    |||||||||||||||||||  |||||||||||||| || | | |||| |  ||||| |||||||||  ||||||||||||| ||||    
T  11867804 ttatttgtaggcattttgttgttgtatgctattaatttgggtattgtgagcttgttcgcagattcattctttatgtttttatcgac 11867889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 26878053 - 26877962
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||||  ||||||||||||| |||||| |||||| ||||||| || | |||||| | |||||| |||||||||  ||||| |||||||    
T  26878053 gattttatcatattatttgtaggcactttgtcgttgtat-ctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttttta 26877962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 41630645 - 41630712
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtt 87  Q
    ||||||||||  |||||||||| ||||||||| |||||||||||||| || | |||||| | ||||||    
T  41630645 gattttatcatattatttgtagacattttgtcgttgtatgctattaacttaggtgttgtgagtttgtt 41630712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 7036362 - 7036439
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcac 98  Q
    ||||||||||  || |||||||| ||||||   ||||||||||||||||| |||||| | | |||||||||||||||||    
T  7036362 gattttatcatattgtttgtaggaattttgctgttgtatgctattaaattggttgtt-tgagtttgtttgcagattcac 7036439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 15571076 - 15571154
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttag 113  Q
    |||||||||||| |||| || ||||||||||| || | |||||| | |||||| |||||||||  | ||||||||||||    
T  15571076 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccattatgtttttag 15571154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 10332477 - 10332396
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||||||||||| || ||||||||||| || | || ||| | ||||||  ||||||||  ||||| |||||||||||    
T  10332477 tttgtaggcattttgtctttatatgctattaacttgggtgatgtgagtttgttcacagattcatcctttacgtttttagcga 10332396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 10723004 - 10723057
Alignment:
Q  131 ttgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||||||||||| |  |||||||||| |||||||||||| ||||| ||||||    
T  10723004 ttgtatttgatgtactcgatcaatttgaatgaataaatatcgttttgtttttgt 10723057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 8984829 - 8984781
Alignment:
Q  136 tttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||||||| ||||||||||| ||||| |||||| ||||| ||||||    
T  8984829 tttgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgt 8984781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 16981461 - 16981541
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| | || || ||||||||||| || | |||||| | |||||| |||||||||  ||||| ||||||||||    
T  16981461 tttgtaggcattatatcgttatatgctattaacttggatgttgtgagtttgttcgcagattcattctttacgtttttagcg 16981541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 4e-37; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 53508362 - 53508529
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    |||||| ||||||||||  |||||||||||||||||||| |||    ||||||| || | |||||| | |||||| |||||||||| |||||||||||||    
T  53508362 tgatttagattttatcatattatttgtaggcattttgtcgttg----ctattaacttggatgttgtgattttgttcgcagattcaccctttatgttttta 53508457  T
Q  113 gcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||| ||||||||||| ||||||| ||||||||| |||||| || | ||||| |||||||||||||||||||    
T  53508458 gcgatattgatcatgttattgtatctgatgtattctatcaaattaaatgaatgaatatcattttgcttttgt 53508529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 7546743 - 7546910
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactt-t 103  Q
    |||||| ||||||| ||||| ||||  |||||||||||||||||| | |||||||||||||| || | || ||| | ||||||||||||||||| ||| |    
T  7546743 tattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcacccttat 7546842  T
Q  104 atgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    | ||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||| | ||| ||||||    
T  7546843 acgtttttagcgatattgatcatgtcattgtctttgatgtattttatcaatttgaataaatgaatatc 7546910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 16235554 - 16235724
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  ||| |||||||||||||||| |||||||||||||| || | || ||| | |||||| ||||||| || || ||    
T  16235554 tattctggtgatttagatttcatcatattacttgtaggcattttgtcgttgtatgctattaacttggatggtgtgagtttgttcgcagatttaccctata 16235653  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattt 175  Q
     ||||||||||| ||||||||| | ||||| | ||||||||| ||||||||||| ||||||||||||||||    
T  16235654 cgtttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaatgaataaatatcattt 16235724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 21289776 - 21289608
Alignment:
Q  3 gatattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactt 102  Q
    |||||||| || |||| ||||| ||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||| ||     
T  21289776 gatattctggtaatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccta 21289677  T
Q  103 tatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    || ||||||||||| ||||||||||| ||||| | ||||| ||| ||||||||||| ||||| ||||||    
T  21289676 tacgtttttagcgatattgatcatgttattgtctctgatgcattctatcaatttgaatgaatgaatatc 21289608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 8914840 - 8915006
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||||||||||| | |||||||||||||| ||   || ||| | |||||| ||||||||||  | ||    
T  8914840 tattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgagtgatgtgagtttgttcgcagattcaccttata 8914939  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
     ||||||||||| |||||| |||| ||||| | ||||||||| ||||||||||| ||||| ||||||    
T  8914940 cgtttttagcgatattgatgatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 8915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 164
Target Start/End: Original strand, 42460878 - 42461036
Alignment:
Q  6 attctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttat 105  Q
    ||||| ||||||| ||||||||||  |||||||||||||||||||  |||||||||||||| || | |  ||| | |||||| |||||||||| |||||     
T  42460878 attctggtgatttagattttatcatattatttgtaggcattttgttgttgtatgctattaacttgggtactgtgagtttgttcgcagattcaccctttac 42460977  T
Q  106 gtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaat 164  Q
     ||| |||||| ||||||||||| ||||| | ||||||||| | ||||||||| |||||    
T  42460978 atttatagcgatattgatcatgttattgtctctgatgtattctgtcaatttgaatgaat 42461036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 51923855 - 51924021
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||| || ||  || ||    
T  51923855 tattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatatccatcctata 51923954  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
     ||||||||||| ||||||||||| ||||| | ||||| ||| ||||||||||| ||||| ||||||    
T  51923955 cgtttttagcgatattgatcatgttattgtctctgatgcattctatcaatttgaatgaatgaatatc 51924021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 27706176 - 27706020
Alignment:
Q  15 attttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    |||| ||||| ||||  |||||||||||||||||||| |||||||||||||| || | || ||| | ||||||  ||||||| | || || |||||||||    
T  27706176 atttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgttagtttgttcccagattcgccctatacgtttttagc 27706077  T
Q  115 gacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    || || |||||||| ||||| | ||||||||| ||||||||||| ||||| ||||||    
T  27706076 gatatcgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 27706020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 41818354 - 41818522
Alignment:
Q  16 ttttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||||   |||||||||||||||||||  ||| ||||||||||  ||| || ||| | |||||| | || ||||| |||||| |||||||||    
T  41818354 ttttgattttatcgtattatttgtaggcattttgttgttgcatgctattaacattggtgatgtgagtttgttcgtagtttcaccctttatatttttagcg 41818453  T
Q  116 acattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    | ||| || |||| ||| | | ||||||||| ||||||||||| ||||| |||||| ||||||||||||    
T  41818454 atattaatgatgttattatctctgatgtattctatcaatttgaatgaatgaatatcgttttgcttttgt 41818522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 27856292 - 27856451
Alignment:
Q  4 atattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttt 103  Q
    ||||||| ||||||| ||||||||||  |||||||||||||||||  | ||| |||||||||| || | || ||| | |||||| |||||||||   |||    
T  27856292 atattctggtgatttagattttatcatattatttgtaggcatttttccgttgcatgctattaacttggatgatgtgagtttgttcgcagattcatctttt 27856391  T
Q  104 atgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaa 163  Q
    | ||||||||||| ||||||||||| ||||| | |||||| || ||||||||||| ||||    
T  27856392 acgtttttagcgatattgatcatgttattgtgtctgatgtgttttatcaatttgaatgaa 27856451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 4711627 - 4711718
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttag 113  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | |||||| | ||||||||||||||||  ||||||||||||||    
T  4711627 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatcctttatgtttttag 4711718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 628883 - 628716
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| |||| |||||  |||||||||||||||||| | |||||| ||||||| || | |||||| | |||||| |||||||||  |||||    
T  628883 tattctggtgatttagattatatcatattatttgtaggcattttgccgttgtattctattaacttgggtgttgtgagtttgttcgcagattcatccttta 628784  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
     |||||||||||  |||||            ||||||||||| ||||||||||| ||||| |||||||||||| ||||||    
T  628783 cgtttttagcgatcttgat------------tttgatgtattctatcaatttgaatgaatgaatatcattttgtttttgt 628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 182
Target Start/End: Complemental strand, 3085234 - 3085085
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgat 131  Q
    |||||||||||||||||| | ||||| ||||||||||| | ||  || | |||||| | |||||||| ||| ||||||||||| |   ||| ||||| ||    
T  3085234 ttatttgtaggcattttgccgttgtaggctattaaattgggtgcagtgagtttgttcgtagattcac-cttcatgtttttagcaatgatgaccatgttat 3085136  T
Q  132 tgtatttgatgtattatatcaatttgattgaataaatatcattttgctttt 182  Q
    ||||| ||| ||||| ||||||||||| ||||| |||||||||||| ||||    
T  3085135 tgtatctgaagtattctatcaatttgaatgaatgaatatcattttgttttt 3085085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 6954639 - 6954545
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | ||||||||||||||||| ||||| |||||||||||    
T  6954639 ttttatcaaattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcga 6954545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 44959916 - 44959822
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| || | || ||| | ||| ||||||||||||| ||||| |||||||||||    
T  44959916 ttttatcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagtttatttgcagattcaccctttacgtttttagcga 44959822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 51303603 - 51303480
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||||||||||  | ||    
T  51303603 tattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccatata 51303504  T
Q  105 tgtttttagcgacattgatcatgt 128  Q
     |||||||| || ||| |||||||    
T  51303503 cgtttttagtgatattaatcatgt 51303480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 53807818 - 53807707
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| |||| |||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||  |||||    
T  53807818 tattctggtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatccttta 53807719  T
Q  105 tgtttttagcga 116  Q
     |||||||||||    
T  53807718 cgtttttagcga 53807707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 40556847 - 40556941
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||  | || | |||||| | |||||| |||||||||| |||||||||||||||||    
T  40556847 ttttatcatattatttgtaggcattttgccgttgtatgctatgcacttgggtgttgtgagtttgttcgcagattcaccctttatgtttttagcga 40556941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 48650677 - 48650583
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| |||||||||| |||||  ||||||||||    
T  48650677 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttagcga 48650583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 50194295 - 50194128
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||| | ||||  || ||||||||||||||| | || ||||||||||| || | |||||| | |||||| |||||||||  |||||    
T  50194295 tattctggtgatttagatatcatcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 50194196  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
     |||||||||||  |||||            | ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  50194195 cgtttttagcgatgttgat------------tctgatgtattatatcaatttgaatgaatgaatatcattttgcttttgt 50194128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 7792147 - 7792086
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||||||||||||| ||||||||||  |||||||||||||||||| ||||||| ||||||||    
T  7792147 tattctagtgatttagattttatcatattatttgtaggcattttgccattgtaagctattaa 7792086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 33580015 - 33580116
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||| | || ||||||||||| || | |||||| | |||||| |||||||||| ||||| ||||||    
T  33580015 gtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgattttgttcgcagattcaccctttacgttttt 33580114  T
Q  112 ag 113  Q
    ||    
T  33580115 ag 33580116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 45568398 - 45568294
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | ||| || |||||||||| ||||| ||||||    
T  45568398 gtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacgttttt 45568299  T
Q  112 agcga 116  Q
    |||||    
T  45568298 agcga 45568294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 9797477 - 9797383
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| || | || ||| | |||||||| | |||||| ||||| ||| |||||||    
T  9797477 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgtttgtatattcaccctttacgttcttagcga 9797383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 26275763 - 26275713
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaaatttg 71  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  26275763 attttatcatattatttgtaggcattttgtcattgtatgctattaactttg 26275713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 40487470 - 40487564
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | || |||| |||||| || | |||||| | |||||| ||| |||||| |||||||||||||||||    
T  40487470 ttttatcatattatttgtaggcattttgccgttatatgttattaacttgggtgttgtgagtttgttcgcaaattcactctttatgtttttagcga 40487564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 44805164 - 44805218
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||| ||||||||||  || ||||||||||||||||||||||||||||||||    
T  44805164 gtgatttagattttatcatattgtttgtaggcattttgtcattgtatgctattaa 44805218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 52923060 - 52922966
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||  | |||||||||||||| || | || ||| | |||||| |||||||||| ||||| |||||||||||    
T  52923060 ttttatcatattatttgtaggcattttaccgttgtatgctattaacttggctgctgtgagtttgttcgcagattcaccctttacgtttttagcga 52922966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 35175562 - 35175643
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||||||||||||||||||||||||||| ||   |||||| | |||||| |||||||||   |||| |||||||||||    
T  35175562 tttgtaggcattttgtcattgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagcga 35175643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 9998612 - 9998704
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| | |||||||| ||||| |||||||||    
T  9998612 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagc 9998704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 10108381 - 10108473
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| | |||||||| ||||| |||||||||    
T  10108381 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagc 10108473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 10229621 - 10229713
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| | |||||||| ||||| |||||||||    
T  10229621 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagc 10229713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 38142661 - 38142815
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    |||||| ||| ||||||  ||||||||||||||||| |  |||||| ||||||| ||   || ||| | |||||||||| |||||| |||||  ||||||    
T  38142661 tgatttagatcttatcatattatttgtaggcattttattgttgtatactattaacttgaatgctgtgagtttgtttgcatattcaccctttacattttta 38142760  T
Q  113 gcgacat--tgatcatgtgattgtatttgatgtattatatcaatttgattgaata 165  Q
    |||| ||  ||||||| | | ||||| | ||||||| ||||||||||| ||||||    
T  38142761 gcgatatgctgatcattttactgtatctaatgtattctatcaatttgaatgaata 38142815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 38860055 - 38859980
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattca 97  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| |||||||||    
T  38860055 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattca 38859980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 52115981 - 52115797
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgc----agattcacac 100  Q
    ||||||| |||||| |||| |||||  |||||||||| ||||||||  || |||| |||||| || | |||||| | ||||||||     ||||||| |     
T  52115981 tattctaatgatttagattgtatcatattatttgtagtcattttgttgttatatgttattaacttgggtgttgtgagtttgtttgttcgtagattcataa 52115882  T
Q  101 tttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatca-ttttgcttttgt 184  Q
    |||| ||||||||||| ||  ||||||| ||||| |  |||||||| ||||||||||| | ||| ||||| | ||||||||||||    
T  52115881 tttacgtttttagcgatatcaatcatgttattgtctccgatgtattctatcaatttgaataaatgaatattatttttgcttttgt 52115797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 10233215 - 10233305
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| | | |||||| |||||||||||||    
T  10233215 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtacattcaccctttatgttttta 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 21533752 - 21533658
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| ||||||| ||  |||| |||||||||||    
T  21533752 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagatttaccttttacgtttttagcga 21533658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12946927 - 12946818
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  || ||||||||||||||| | || ||||||||||| || | |||||| |||||||| | |||||||   ||||    
T  12946927 tattctggtgatttagatttcatcatattttttgtaggcattttgcccttatatgctattaacttgggtgttgtgaatttgttcgaagattcatcgttta 12946828  T
Q  105 tgtttttagc 114  Q
    || |||||||    
T  12946827 tgcttttagc 12946818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 44907309 - 44907229
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | |||||| | |||||| |||||||||  ||||| ||||||||||    
T  44907309 tttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcg 44907229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 46304463 - 46304371
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||  |||| ||||||||| ||| | |||||||||||||| ||   |||||| | |||||| |||||||||| ||||| |||||||||    
T  46304463 ttttatcatattatatgtaggcatgttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcaccctttacgtttttagc 46304371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 54149134 - 54149230
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||||  ||||||||||||||| |||| ||||||||||||||  | | || ||| | || ||| |||| ||||| ||||| |||||||||||    
T  54149134 gattttatcatattatttgtaggcattatgtcgttgtatgctattaacctgggtgatgtgagttagttcgcaggttcaccctttacgtttttagcga 54149230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 21313179 - 21313274
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    ||||||||||  |||||||||| ||||||| | |||||||||||||| || | || ||| | |||||| | |||||||| |||||  |||||||||    
T  21313179 gattttatcatattatttgtagccattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacatttttagcg 21313274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 24176043 - 24175960
Alignment:
Q  53 ttgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtat 136  Q
    ||||||||||||||||| | | |||| | |||||||||| |||||| |||||  ||||||||||  |||| ||||| |||||||    
T  24176043 ttgtatgctattaaattgggtattgtgagtttgtttgcaaattcaccctttacatttttagcgatgttgaacatgttattgtat 24175960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 29922187 - 29922246
Alignment:
Q  7 ttctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||| ||||||| ||||||||||  || ||||||||||||||| | ||||||||||||||    
T  29922187 ttctggtgatttagattttatcatattgtttgtaggcattttgccgttgtatgctattaa 29922246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 29971340 - 29971399
Alignment:
Q  7 ttctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||| ||||||| ||||||||||  || ||||||||||||||| | ||||||||||||||    
T  29971340 ttctggtgatttagattttatcatattgtttgtaggcattttgccgttgtatgctattaa 29971399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 31271744 - 31271681
Alignment:
Q  53 ttgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||||| ||| || | |||||| | ||||||||||||||||| ||||| |||||||||||    
T  31271744 ttgtatgctaataacttaggtgttgtgagtttgtttgcagattcaccctttacgtttttagcga 31271681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 51487278 - 51487333
Alignment:
Q  73 tgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgt 128  Q
    |||||| |||||||| |||||||||| ||||| ||||||||||| ||| |||||||    
T  51487278 tgttgtgaatttgttcgcagattcaccctttacgtttttagcgatattaatcatgt 51487333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 14859628 - 14859777
Alignment:
Q  15 attttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    |||| |||||||||   ||||| || ||||||||||| |||||||||||||| || | |||||| |  ||||| |||||||||| || ||  ||||||||    
T  14859628 atttagattttatcgtattattggttggcattttgtcgttgtatgctattaacttgggtgttgtgagattgttagcagattcaccctatacatttttagc 14859727  T
Q  115 gacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatat 170  Q
    ||   || |||  | ||||||| ||||||||| ||||||||||| ||||| |||||    
T  14859728 ga---tg-tca--ttattgtatctgatgtattctatcaatttgaatgaatgaatat 14859777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 19619856 - 19619902
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||||||  |||||||||||||||||| | ||||||||||||||    
T  19619856 gattttatcatattatttgtaggcattttgccgttgtatgctattaa 19619902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 21431758 - 21431852
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | ||||||| |||||| || | || ||| |  ||||| ||||||||||  |||| |||||||||||    
T  21431758 ttttatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgctgtgagattgttcgcagattcaccatttacgtttttagcga 21431852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 25162600 - 25162680
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | |||||| | |||||| || ||||||  ||||| ||||||||||    
T  25162600 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcggattcatcctttacgtttttagcg 25162680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 30648625 - 30648549
Alignment:
Q  39 taggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||| | |||| || ||||||||||| || | |||||| | |||||| |||||||||  ||||||||||||||||    
T  30648625 taggcaatatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttatgtttttagcg 30648549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 32607633 - 32607713
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| || |||| |||||||||||  | | |||||| | |||||| |||||||||  ||||| ||||||||||    
T  32607633 tttgtaggcattatgccattatatgctattaacctggatgttgtgagtttgttcgcagattcatcctttacgtttttagcg 32607713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 32701646 - 32701730
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||| ||||||||||||| | ||||||||||| || || | || ||| | |||||| ||||||||||  ||||| ||||||||||    
T  32701646 ttatctgtaggcattttgccgttgtatgctatgaacttggatgctgtgagtttgttcgcagattcaccttttatatttttagcga 32701730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 43017043 - 43017127
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||||||||||||| | |||||||||||||| || | |||||| | ||| ||  || |||||  ||||| |||||||||||    
T  43017043 ttatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacgtttttagcga 43017127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 43833954 - 43833777
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| | ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||||||||||||||  ||||    
T  43833954 tattctggtgatttagtttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccattta 43833855  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgctttt 182  Q
      |||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||| | ||||||||    
T  43833854 cttttttagcgatattgatcatgttattgtctttgatgtattctatcaatttgattggatgaatatcgtcttgctttt 43833777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 18890650 - 18890491
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||||||||  |||||||||||||||||||| |||||||||||||| || | || ||| | |||||| |||||||||| || |  ||||||    
T  18890650 gtgatttagattttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatccgttttt 18890551  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    ||||| ||| ||||||| ||||| | ||||||||| ||||||||||| ||||| ||||||    
T  18890550 agcgatattaatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 18890491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 42046352 - 42046518
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||||||||||| ||| |||||||||||| || | |||||| | |||||| |||||||||| || ||    
T  42046352 tattctggtgatttagatttcatcatattatttgtaggcattttgacatcgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctata 42046451  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
     ||||||||||| ||||||||||| |||||   ||||||||| |||| |||||| ||||| ||||||    
T  42046452 cgtttttagcgatattgatcatgttattgtcactgatgtattctatcgatttgaatgaatgaatatc 42046518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 41896648 - 41896812
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||||||||||||| |||||||||||||| || | |||||| | |||||| |||||||||| || ||    
T  41896648 tattctggtgatttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctata 41896747  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatat 170  Q
     ||||||||| | ||||||||||| ||||  | ||||||||| ||||||||||| ||||| |||||    
T  41896748 cgtttttagcaatattgatcatgttattg-ctctgatgtattctatcaatttgaatgaatgaatat 41896812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 8867934 - 8868118
Alignment:
Q  3 gatattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctatt---aaatttgttgttgtaaatttgtttgcagattcaca 99  Q
    |||||||| ||||||| ||||||||||  |||||||||||||||||||| ||||||| ||||   || || | || ||| | |||||| ||| ||||||     
T  8867934 gatattctggtgatttagattttatcatattatttgtaggcattttgtcgttgtatgttatttataacttgggtggtgtgagtttgttcgcaaattcacc 8868033  T
Q  100 ctttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
     |||| ||||||||| |  |||||||||| ||||||| ||||||||| ||||||||||| ||||| ||| || ||||||||||||    
T  8868034 ttttacgtttttagcaatgttgatcatgttattgtatctgatgtattctatcaatttgaatgaatgaatgtcgttttgcttttgt 8868118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 14585815 - 14585974
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||| ||||  |||||||||||| ||||| | |||||||||||||| || | || ||| | |||||| |||||||||| || || ||||||    
T  14585815 gtgatttagatttcatcatattatttgtaggcgttttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgttttt 14585914  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    ||||| ||||||||||| ||| | | ||||||||| ||||||||||| ||||| ||||||    
T  14585915 agcgatattgatcatgttattatctctgatgtattctatcaatttgaatgaatgaatatc 14585974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 184
Target Start/End: Original strand, 34609974 - 34610146
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||  ||||||||||| | ||| |||||||||| ||   |||||||| |||||| |||| || || || |  ||||||    
T  34609974 gtgatttaggttttatcatattattaataggcattttggcgttgaatgctattaacttaaatgttgtaagtttgttcgcagttttaccctctgcgttttt 34610073  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||| | ||| || |||| ||||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  34610074 agcaatattaatgatgttattgtatctgatgtattatatcaatttgaatgaataaatatcgttttgtttttgt 34610146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 16928698 - 16928604
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| || | |||||| | |||||| |||||||||| ||||| |||||||||||    
T  16928698 ttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga 16928604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 15344439 - 15344600
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| |||| |||||  |||||||||||||||||||| |||||||||||||| || | || ||| | |||||| |||||||||  |||||    
T  15344439 tattctggtgatttagattatatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatccttta 15344538  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
     |||||||||||      || | ||||| |    |||||||| ||||||||||| |||||||||||||||||    
T  15344539 cgtttttagcga------tcttttgattct----gatgtattctatcaatttgaatgaataaatatcatttt 15344600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 15433504 - 15433665
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| |||| |||||  |||||||||||||||||||| |||||||||||||| || | || ||| | |||||| |||||||||  |||||    
T  15433504 tattctggtgatttagattatatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatccttta 15433603  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
     |||||||||||      || | ||||| |    |||||||| ||||||||||| |||||||||||||||||    
T  15433604 cgtttttagcga------tcttttgattct----gatgtattctatcaatttgaatgaataaatatcatttt 15433665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 15524808 - 15524969
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| |||| |||||  |||||||||||||||||||| |||||||||||||| || | || ||| | |||||| |||||||||  |||||    
T  15524808 tattctggtgatttagattatatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatccttta 15524907  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
     |||||||||||      || | ||||| |    |||||||| ||||||||||| |||||||||||||||||    
T  15524908 cgtttttagcga------tcttttgattct----gatgtattctatcaatttgaatgaataaatatcatttt 15524969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 29617232 - 29617125
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||||||||  |||||||||||||||||||  |||||||||||||| ||   |||||| | |||||| |||||||| | |||||    
T  29617232 tattctggtgatttagattttatcatattatttgtaggcattttgttgttgtatgctattaacttaaatgttgtgagtttgttcgcagattcgcccttta 29617133  T
Q  105 tgttttta 112  Q
    ||||||||    
T  29617132 tgttttta 29617125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 33347461 - 33347368
Alignment:
Q  23 tttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| | |||| | | |||||| ||||||||||  ||||  ||||||||||    
T  33347461 tttatcatattatttgtaggcattttgtcattgtatgctattaaattaggtgttatgagtttgttcgcagattcaccttttacctttttagcga 33347368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 7198146 - 7198042
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||||||||  ||||||| ||| |||||||| |||||||||||||| || | |||||| | ||| || |||||||||| ||||| ||||||    
T  7198146 gtgatttagattttatcatattatttgcaggaattttgtcgttgtatgctattaatttgggtgttgtgagtttattcgcagattcaccctttacgttttt 7198047  T
Q  112 agcga 116  Q
    |||||    
T  7198046 agcga 7198042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 30568262 - 30568111
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattg 121  Q
    ||||||||  |||||||||||||||||| | || ||||||||||| || | |||||| | |||||| |||||||||| ||||| |||||||||||         
T  30568262 ttttatcatgttatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga----- 30568168  T
Q  122 atcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
          || |||||| ||||||| | ||||||||||| ||||| |||||||||||| ||||||    
T  30568167 ------tgtttgtatatgatgtaatctatcaatttgaatgaatgaatatcattttgtttttgt 30568111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 31013549 - 31013457
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| |||||||||| ||||| |||||||||    
T  31013549 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagc 31013457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 37971431 - 37971513
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    ||||||||| |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| |||||||||| |||||    
T  37971431 ttttatcacattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcacccttta 37971513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 471116 - 470937
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcatttt--gtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttt 110  Q
    |||||| ||||||||||  |||||||||||||||||  |||  |||||| |||||| || | || ||| | |||||| | ||||||||| ||||||||||    
T  471116 tgatttagattttatcatattatttgtaggcattttttgtcgatgtatgttattaacttgggtgatgtgattttgttcgtagattcacattttatgtttt 471017  T
Q  111 tagcgacattgatcatg------tgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||  |||||||||      | ||||||| ||||||||| ||||||||| | ||||| |||||  ||||| ||||||    
T  471016 tagcgatgttgatcatgttattattattgtatctgatgtattctatcaatttaaatgaatgaatattgttttgtttttgt 470937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 23230791 - 23230867
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcac 98  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| || | |||||| | |||||| ||||||||||    
T  23230791 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcac 23230867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 7883182 - 7883088
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||| ||||||| || | || ||| | |||||| |||||||||| ||||| |||||||||||    
T  7883182 ttttatcatattatttgtaggcattttgccgttgtatcctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcga 7883088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 8412438 - 8412369
Alignment:
Q  47 ttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||| || ||||||||||| || | |||||| | ||||||||||||||||| |||||||||||||||||    
T  8412438 ttgtcgttttatgctattaacttgggtgttgtgagtttgtttgcagattcaccctttatgtttttagcga 8412369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 27747025 - 27746945
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | |||||||||||| ||||||||||||   |||| ||||||||||    
T  27747025 tttgtaggcattatgtcgttatatgctattaacttggatgttgtaaatttatttgcagattcatcatttacgtttttagcg 27746945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 28086765 - 28086709
Alignment:
Q  11 agtgatttt-gattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||    
T  28086765 agtgattttagattttatcatattatttgtaggcattttgtcgttgtatgctattaa 28086709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 3673599 - 3673682
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||||||||| | |||||| ||||||| || | || ||| | ||||||||||| ||||| ||||| ||||||||||    
T  3673599 ttatttgtaggcattttgccgttgtatcctattaacttggatgctgtgagtttgtttgcagtttcaccctttacgtttttagcg 3673682  T

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Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 1236655 - 1236546
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| |||| |||||   ||||| ||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||  |||||    
T  1236655 tattctggtgatttagattatatcatactatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatccttta 1236556  T
Q  105 tgtttttagc 114  Q
     |||||||||    
T  1236555 cgtttttagc 1236546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 5333560 - 5333621
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||||||||||||| |||||| |||  ||||||||| |||||||||  ||||||||||||||    
T  5333560 tattctagtgatttagattttgtcatattatttgtatgcattttgttgttgtatgctattaa 5333621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 184
Target Start/End: Original strand, 34493167 - 34493312
Alignment:
Q  39 taggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtattt 138  Q
    ||||||||||||| ||| ||| |||||| ||   | |||| | |||||| | |||||||| |||| ||||||||||||  || |||||||  |||||| |    
T  34493167 taggcattttgtcgttgcatgttattaacttgagttttgtgagtttgttcgtagattcaccctttttgtttttagcgatgttaatcatgttgttgtatgt 34493266  T
Q  139 gatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||  ||| |||||||||||  |||| |||||| |||| |||||||    
T  34493267 gatacattttatcaatttgaaagaatgaatatcgttttccttttgt 34493312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 41060206 - 41060085
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacat 119  Q
    ||||||||||  |||||||||| ||||||||  ||||||||||| || || | || ||| | |||||| |||||||||  ||||| |||||||| ||  |    
T  41060206 gattttatcatattatttgtagccattttgttgttgtatgctatcaatttgggtgatgtgagtttgttcgcagattcatcctttacgtttttagtgatgt 41060107  T
Q  120 tgatcatgtgattgtatttgat 141  Q
    ||| ||||| ||||||| ||||    
T  41060106 tgaacatgttattgtatctgat 41060085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 27110423 - 27110331
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattca 97  Q
    |||| |||||| || ||||||||||  |||||||||| |||||| || |||||||||||||| || | |||||| | |||||| ||| |||||    
T  27110423 tattttagtgacttagattttatcatattatttgtagacattttatcgttgtatgctattaacttgggtgttgtgagtttgttcgcatattca 27110331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 45445754 - 45445662
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||||  |||||||||||||||||||  || ||||||||||| || | |||||| | |||||| ||| ||||||  |||| |||||||    
T  45445754 gattttatcatattatttgtaggcattttgttgttttatgctattaacttggatgttgtgagtttgttcgcatattcaccttttacgttttta 45445662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 33214612 - 33214517
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgac 117  Q
    ||||||||  |||||| ||| ||||||| | || ||||||||||| |||| || ||| | |||||| | |||||||| ||||| ||||||||||||    
T  33214612 ttttatcatattatttttagacattttgccgttttatgctattaactttggtgctgttagtttgttcgtagattcaccctttacgtttttagcgac 33214517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 7677224 - 7677130
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  ||||||||| |||||||| | ||||||| |||||| || | || ||| | ||||||  ||||||||| ||||| |||||||||||    
T  7677224 ttttatcatattatttgtaagcattttgccgttgtatgttattaacttgggtgctgtgactttgttcacagattcactctttacgtttttagcga 7677130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 10377837 - 10377931
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||| | ||||||||||  || | |||||||||||    
T  10377837 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgctcgcagattcaccattcacgtttttagcga 10377931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 12654326 - 12654364
Alignment:
Q  138 tgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  12654326 tgatgtattatatcgatttgaatgaataaatatcatttt 12654364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 28897855 - 28897901
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||||||  |||||||||| |||||||||||| |||||||||||    
T  28897855 gattttatcatattatttgtagtcattttgtcattctatgctattaa 28897901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 31720712 - 31720634
Alignment:
Q  106 gtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||| ||| |||||  |||| ||| |||| |||||||| ||||||||| | ||||| |||||||||||| ||||||    
T  31720712 gtttttatcgatattgaatatgtcattatattcgatgtattttatcaatttaagtgaatgaatatcattttgtttttgt 31720634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 1239355 - 1239294
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||||| ||||||| |||| |||||   ||||||||||||||||| | ||||||||||||||    
T  1239355 tattctggtgatttagattatatcatactatttgtaggcattttgacgttgtatgctattaa 1239294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 17693456 - 17693403
Alignment:
Q  131 ttgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||||||||||| | ||||||||||| ||||| |||||| ||||| ||||||    
T  17693456 ttgtatttgatgtactctatcaatttgagtgaatgaatatcgttttgtttttgt 17693403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 24099201 - 24099103
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||||||||  |||||||||||||       ||| ||||||||||| || | |||||| | |||||| |||||||||| ||||| ||||||    
T  24099201 gtgatttagattttatcatattatttgtaggcaa------attatatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacgttttt 24099108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 40618916 - 40618863
Alignment:
Q  131 ttgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||| ||||||||| ||||||||||| ||||| |||||| ||||| ||||||    
T  40618916 ttgtatctgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgt 40618863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 4809138 - 4809218
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| || | || ||||||||||| || | |||||| | |||||| |||||||||  ||||| ||||||||||    
T  4809138 tttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcctttacgtttttagcg 4809218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 9637350 - 9637306
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||||  |||||| ||||||||||||| ||||||||||||||    
T  9637350 ttttatcatattatttttaggcattttgtcgttgtatgctattaa 9637306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 14544822 - 14544742
Alignment:
Q  36 ttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||||||||| | |||| ||||||||| || | || ||| | ||||||||||||||||  | ||| |||||||||||    
T  14544822 ttgtaggcattttgccgttgtttgctattaacttggatggtgtgagtttgtttgcagattcatccattacgtttttagcga 14544742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 20553182 - 20553138
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||||  |||||||||||||||||| | ||||||||||||||    
T  20553182 ttttatcatattatttgtaggcattttgccgttgtatgctattaa 20553138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 21237929 - 21238030
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    |||||| ||||||||||  || ||||||||  ||||||| |||||| |||||||  | | |||||| | ||||||  ||||||||| ||||| |||||||    
T  21237929 tgatttagattttatca--ttgtttgtaggatttttgtcgttgtatcctattaacatgggtgttgtgagtttgttcacagattcaccctttacgttttta 21238026  T
Q  113 gcga 116  Q
    ||||    
T  21238027 gcga 21238030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 34680707 - 34680671
Alignment:
Q  140 atgtattatatcaatttgattgaataaatatcatttt 176  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  34680707 atgtattatatcaatttgaatgaatgaatatcatttt 34680671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 44099846 - 44099766
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||| ||||| |||| || ||||||||||| || | |||||| | |||||| |||||||||  ||||| ||||||||||    
T  44099846 tttgtatgcattatgtcgttatatgctattaacttggatgttgtgagtttgttagcagattcatcctttacgtttttagcg 44099766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 6155185 - 6155001
Alignment:
Q  3 gatattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgtt---gtaaatttgtttgcagattcaca 99  Q
    |||||||| ||||||| |||| |||||  |||||||||||||||||||| |||||||||||||| || | || |   || | |||||| ||||||||||     
T  6155185 gatattctggtgatttagattctatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctactgtgagtttgttcgcagattcacc 6155086  T
Q  100 ctttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||||||||||||||  |||||||| | ||||||| | ||||||| ||||||||||| ||||| |||||||||||| ||||||    
T  6155085 ctttatgtttttagcgatgttgatcattttattgtatctaatgtattctatcaatttgaatgaatgaatatcattttgtttttgt 6155001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 36161867 - 36162031
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||||||||  |||||||||||||||| ||| || |||| |||||| || | |||||| | ||||||  ||||||||| ||||| ||||||    
T  36161867 gtgatttagattttatcatattatttgtaggcatttggtcgttatatgttattaacttgggtgttgtgagtttgttcacagattcactctttacgttttt 36161966  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    | |||  |||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  36161967 aacgatgttgatcatgttattgtatttgatgtattctatcaatttgaatgaatgaatatcatttt 36162031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 18935931 - 18936097
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  ||||||||||||||||||  |||||| | |||||| || | |||||| | ||||||||||||||||| || ||    
T  18935931 tattctggtgatttagatttcatcatattatttgtaggcattttgctattgtacgttattaacttgggtgttgtgagtttgtttgcagattcaccctata 18936030  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    |||||||||||| ||||||||||  ||||| | ||||||||| ||||||||||| ||||| ||||||    
T  18936031 tgtttttagcgatattgatcatgctattgtctctgatgtattctatcaatttgaatgaatgaatatc 18936097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 9714058 - 9714237
Alignment:
Q  4 atattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttt 103  Q
    |||||||||||| || ||||||||||  |||||||||||||||||||||||||||| | |||| ||   |||||| | |||||| |||| ||||| ||||    
T  9714058 atattctagtgaattagattttatcatattatttgtaggcattttgtcattgtatgttgttaacttgagtgttgtgagtttgttcgcaggttcacccttt 9714157  T
Q  104 atgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    | ||||||| |||  ||||||| || ||||| ||| ||||||| ||||||||||| ||||  |||||||||||||||||||    
T  9714158 acgtttttaacga-tttgatcaggttattgtcttttatgtattctatcaatttgaatgaacgaatatcattttgcttttgt 9714237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 36194857 - 36195023
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||||||||||  | ||    
T  36194857 tattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccttata 36194956  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    ||||||||| || ||||||| ||| ||| | | ||||||||| ||||||||||| ||||| ||||||    
T  36194957 tgtttttagtgatattgatcgtgttattatgtctgatgtattctatcaatttgaatgaatgaatatc 36195023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 27652093 - 27652258
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||||||| ||| ||||| ||||  |||||||||| ||||||| | |||||||||||||| ||   |||||| | |||||| |||||||||  || ||    
T  27652093 tattctagtg-tttagatttcatcatattatttgtagacattttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcctata 27652191  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
     ||||||||||| || |||||||| ||||| ||||||||||| ||||||||||| ||||| ||||||    
T  27652192 cgtttttagcgatatcgatcatgttattgtctttgatgtattctatcaatttgaatgaatgaatatc 27652258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 31891247 - 31891073
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| || |  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||| |||||| || ||    
T  31891247 tattctggtgatttagatttcattatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctata 31891148  T
Q  105 tgtttttagcgacattgatc----atgtgattgtatttgatgtattatatcaatttgattgaataaatatcattt 175  Q
     ||||||||||| |||||||    ||||  |||| | ||||||||| ||||||||||| ||||||||||||||||    
T  31891147 cgtttttagcgatattgatcgatcatgtttttgtctctgatgtattctatcaatttgaatgaataaatatcattt 31891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 177
Target Start/End: Original strand, 37465629 - 37465794
Alignment:
Q  3 gatattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactt 102  Q
    |||||||| ||||||| ||||||||||  ||||||||| |||||||||| |||||||||||||| || | |||||| | |||||||| |||             
T  37465629 gatattctggtgatttagattttatcatattatttgtaagcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttgtaga--------- 37465719  T
Q  103 tatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttg 177  Q
    |||||||||| |||  |||||||||| ||||||| ||||||||| ||||||||| | ||||| |||||| |||||    
T  37465720 tatgtttttaacgatgttgatcatgttattgtatctgatgtattctatcaatttaaatgaatgaatatcgttttg 37465794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 35348473 - 35348567
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| |||| ||||||||||| || | |||||| | ||||||||||||||||| ||||| |||||||||||    
T  35348473 ttttatcatattatttgtaggcattttgccattttatgctattaacttgggtgttgtgagtttgtttgcagattcaccctttacgtttttagcga 35348567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 2520935 - 2521039
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| |||||||||   |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| |||||||||| ||||| ||||||    
T  2520935 gtgatttagattttatcgtattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttt 2521034  T
Q  112 agcga 116  Q
    |||||    
T  2521035 agcga 2521039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 1621469 - 1621305
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||| |||||   | |||||||| ||||| || | |||||| | |||||| |||||||||| || ||    
T  1621469 tattctggtgatttagatttcatcatattatttgtagacatttc--cgttgtatgcaattaacttggatgttgtgagtttgttcgcagattcaccctata 1621372  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
     ||||||||| | ||||||||||| ||||| | ||||||||| ||| ||||||| ||||| ||||||    
T  1621371 cgtttttagcaatattgatcatgttattgtctctgatgtattctataaatttgaatgaatgaatatc 1621305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 43853600 - 43853763
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    |||||| ||||||||||  ||||||||  |||||||||  ||||||| |||||| || | |||||| | |||||| ||||||| ||  ||||  ||||||    
T  43853600 tgatttagattttatcatattatttgtcagcattttgttgttgtatgttattaacttggatgttgtgagtttgttcgcagattaaccatttacattttta 43853699  T
Q  113 gcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    ||||  ||||  |||| ||||||| ||||||||| ||||||||||| ||||| |||||| ||||    
T  43853700 gcgatgttgagtatgttattgtatctgatgtattctatcaatttgaatgaatgaatatcgtttt 43853763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 22611349 - 22611507
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattg 121  Q
    ||||||||  |||||||||||||||||| | ||||||| ||||||||| | || ||| | |||||| |||||||||| ||||| ||||||||||   ||     
T  22611349 ttttatcatattatttgtaggcattttgccgttgtatggtattaaattgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcg--ttta 22611446  T
Q  122 atcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    || ||||  |||||| ||||||| | |||| |||| | |||||||||||| ||||| ||||||    
T  22611447 atgatgt--ttgtatctgatgtactctatcgatttaaatgaataaatatcgttttgtttttgt 22611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 29960910 - 29960798
Alignment:
Q  4 atattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttt 103  Q
    ||||| ||||||||| ||||||||||   ||||||||||||||||| | ||||||||| |||| || | || ||| | |||||| ||||||||||  |||    
T  29960910 atattttagtgatttagattttatcatactatttgtaggcattttgccgttgtatgcttttaacttgggtgctgtgagtttgttcgcagattcacctttt 29960811  T
Q  104 atgtttttagcga 116  Q
    |||||||||||||    
T  29960810 atgtttttagcga 29960798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 36204340 - 36204228
Alignment:
Q  4 atattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttt 103  Q
    ||||||| ||||||| ||||||||||  ||||||||||  |||||| |||| |||| |||||| || | |||||| | ||||||  ||||||||| ||||    
T  36204340 atattctggtgatttagattttatcatattatttgtagatattttgccattatatgttattaatttggatgttgtgagtttgttcacagattcacccttt 36204241  T
Q  104 atgtttttagcga 116  Q
    |||||||||||||    
T  36204240 atgtttttagcga 36204228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 42032482 - 42032311
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagatt-cacactttatgtttt 110  Q
    ||||||| ||| ||||||  ||||| |||| ||||||| | |||||||||||||| ||   |||||| | |||||||||| ||| ||| |||||||||||    
T  42032482 gtgatttagatgttatcatattattggtagccattttgccgttgtatgctattaacttgaatgttgtgagtttgtttgcaaatttcac-ctttatgtttt 42032384  T
Q  111 tagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttg 183  Q
    || |||  ||||| |||| |||  || ||||||||| ||||||||||| ||||| |||||| |||| ||||||    
T  42032383 taacgatgttgattatgttattacatatgatgtattctatcaatttgaatgaatgaatatcgtttttcttttg 42032311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 47320372 - 47320261
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| |||| |||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||  |||||    
T  47320372 tattctggtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcattcttta 47320273  T
Q  105 tgtttttagcga 116  Q
     |||||||||||    
T  47320272 cgtttttagcga 47320261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 56040589 - 56040495
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| || | || ||| | |||| | |||||||||| ||||| |||||||||||    
T  56040589 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttggatgctgtgagtttgctcgcagattcaccctttacgtttttagcga 56040495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 33332482 - 33332391
Alignment:
Q  73 tgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaat 164  Q
    |||||| | |||||| ||| |||||| ||||| ||||||||||| ||||||||| | ||||| | ||||||||| ||||||||||| |||||    
T  33332482 tgttgtgagtttgttcgcaaattcaccctttacgtttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaatgaat 33332391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 19853455 - 19853365
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||  |||||| ||||||||||| | |||||||||||||| || | |||||| | |||||| |||||||||| ||||| |||||||    
T  19853455 ttttatcatattatttctaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttta 19853365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 43510362 - 43510456
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||||| |||||||  ||||| || | || ||| | |||||| |||||||||| ||||| |||||||||||    
T  43510362 ttttatcatattatttgtaggcattttgtcgttgtatgtcattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcga 43510456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 53811194 - 53811287
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | ||||||  | ||||| |||||||||| ||||| |||||||||||    
T  53811194 ttttatcatattatttgtaggcattttggcgttgtatgctattaacttgggtgttgt-gagttgttcgcagattcaccctttacgtttttagcga 53811287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 35395500 - 35395456
Alignment:
Q  140 atgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  35395500 atgtattatatcaatttgaatgaataaatatcattttgtttttgt 35395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 51888171 - 51888063
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||||||||  |||||||||||| ||||| ||||| |||||||||| || | |||||| | |||||| ||| || ||| |||||    
T  51888171 tattctggtgatttagattttatcatattatttgtaggcgttttgccattgcatgctattaacttaggtgttgtgagtttgttcgcatatccacccttta 51888072  T
Q  105 tgtttttag 113  Q
      |||||||    
T  51888071 catttttag 51888063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 52933902 - 52933738
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||||||||  ||||||||||| ||||||   ||||||| |||||| ||   || ||| | |||||  ||||||| || |||||  |||||    
T  52933902 gtgatttagattttatcatattatttgtaggtattttgcttttgtatgttattaacttgagtgatgtgagtttgtgcgcagatttacgctttacattttt 52933803  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    |||||  ||| |||||| ||||||| | ||||||| ||||||||||| | ||| |||||| ||||    
T  52933802 agcgatgttggtcatgttattgtatctaatgtattttatcaatttgaataaatgaatatcgtttt 52933738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 9048829 - 9048991
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacatt 120  Q
    |||||||||  |||||||||||||||||||| |  | |||||| || || | |||||| | ||||||| ||||||||| ||||| ||||| | |||  ||    
T  9048829 attttatcatattatttgtaggcattttgtcgtcatgtgctataaacttgggtgttgtgagtttgtttacagattcaccctttacgttttaa-cgatgtt 9048927  T
Q  121 gatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
      |||||| ||||||| | |  |||| ||||||||||| ||||| |||||| ||||| ||||||    
T  9048928 agtcatgttattgtatctcaattattctatcaatttgaatgaatgaatatcgttttgtttttgt 9048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 9178519 - 9178609
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| ||   ||  || | |||||| |||| ||||| |||||||||||||    
T  9178519 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgtgtgacgtgagtttgttcgcagtttcaccctttatgttttta 9178609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 29120324 - 29120278
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||    
T  29120324 gattttatcatattatttgtaggcattttgtcgttgtatgctattaa 29120278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 32766680 - 32766774
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  ||||||||||||||| |||| |||||||||||||| || | || ||| | ||||||  ||||||||| ||||  |||||||||||    
T  32766680 ttttatcatattatttgtaggcattatgtcgttgtatgctattaacttgggtgctgtgagtttgttctcagattcaccctttgcgtttttagcga 32766774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 45418676 - 45418722
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||    
T  45418676 gattttatcatattatttgtaggcattttgtcgttgtatgctattaa 45418722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 48257575 - 48257485
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||  ||||||||||| |||||| | |||||||||||||| || | | |||| | |||||| |||||||||| ||||| |||||||    
T  48257575 ttttatcatattatttgtaggtattttgccgttgtatgctattaacttggattttgtgagtttgttcgcagattcaccctttacgttttta 48257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 33921209 - 33921314
Alignment:
Q  11 agtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttt 110  Q
    ||||| || ||||||||||  ||||||||||||||| | |  |||||||||||||| || | |||||| | |||||| ||| |||| | |||||||||||    
T  33921209 agtgacttagattttatcatattatttgtaggcattgtatagttgtatgctattaacttggatgttgtgagtttgttcgcatattctccctttatgtttt 33921308  T
Q  111 tagcga 116  Q
     |||||    
T  33921309 cagcga 33921314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 36184692 - 36184764
Alignment:
Q  17 tttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttg 89  Q
    |||||||||||||   ||||| ||||||||||||| |||||||||||||| || | |||||| | ||||||||    
T  36184692 tttgattttatcatactatttctaggcattttgtcgttgtatgctattaacttggatgttgtgagtttgtttg 36184764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 56156585 - 56156493
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    |||||||| ||||||||||||||||||| | || ||||||||| |  | | |||||| | |||||| ||||||||||  |||| |||||||||    
T  56156585 ttttatcaatttatttgtaggcattttgccgttttatgctatttacctgggtgttgtgagtttgttcgcagattcaccttttacgtttttagc 56156493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 22038701 - 22038618
Alignment:
Q  73 tgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaattt 156  Q
    |||||| | |||||| | ||||| || ||||| |||||||||||  |  ||||||| ||||||||||||||||| |||||||||    
T  22038701 tgttgtgagtttgttcgtagatttaccctttacgtttttagcgatgtatatcatgttattgtatttgatgtattctatcaattt 22038618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 48351068 - 48351001
Alignment:
Q  91 agattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttga 158  Q
    |||||||  ||||| ||| |||||||  |||||||||| ||||||| ||||||||| |||||||||||    
T  48351068 agattcatcctttacgttattagcgatgttgatcatgtcattgtatctgatgtattctatcaatttga 48351001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 7008494 - 7008421
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagatt 95  Q
    ||||||||| |||||||||| | |||||||||| ||||||||| || || | |||||| | ||||||||||||||    
T  7008494 attttatcattttatttgtatgtattttgtcat-gtatgctatcaacttagatgttgtgagtttgtttgcagatt 7008421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 7393422 - 7393500
Alignment:
Q  80 aatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttga 158  Q
    |||||||| ||| |||||| |||||  |||||||||| |||||||||   ||||||| |||| |||| |||||||||||    
T  7393422 aatttgttcgcatattcaccctttacatttttagcgatattgatcataatattgtatctgatatattctatcaatttga 7393500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 22305566 - 22305520
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||||||  ||||||||||| |||||||| ||||||||||||||    
T  22305566 gattttatcatattatttgtaggtattttgtcgttgtatgctattaa 22305520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 26090854 - 26090760
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||  ||||||| ||  || ||||| |||||||||||||| || | || ||| ||||||||| ||||||||  ||||| ||||||||||    
T  26090854 attttatcatattatttgcagatatattgtcgttgtatgctattaatttggatgctgtgaatttgtttacagattcatcctttacgtttttagcg 26090760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 55656586 - 55656688
Alignment:
Q  54 tgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaa 153  Q
    ||||||||||||| || | ||| || |||||||| |||||| |||  |||| ||||||||| |  |||||||||| |||| || | ||||||| ||||||    
T  55656586 tgtatgctattaatttaggtgtcgtgaatttgttcgcagatccaccgtttacgtttttagctatgttgatcatgttattgcatctaatgtattctatcaa 55656685  T
Q  154 ttt 156  Q
    |||    
T  55656686 ttt 55656688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 13634270 - 13634375
Alignment:
Q  11 agtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttt 110  Q
    |||||||| | |||||||   ||||||||||  |||||| | |||||||||||||| || | || ||| |||||||| | |||||||| ||||| | |||    
T  13634270 agtgatttaggttttatcttattatttgtagttattttgccgttgtatgctattaacttgggtgctgtgaatttgttcggagattcaccctttacgcttt 13634369  T
Q  111 tagcga 116  Q
    ||||||    
T  13634370 tagcga 13634375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 21662701 - 21662754
Alignment:
Q  131 ttgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||||||||||| | ||||| ||||| |||||||||||| ||||| ||||||    
T  21662701 ttgtatttgatgtactctatcactttgaatgaataaatatcgttttgattttgt 21662754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 21671465 - 21671518
Alignment:
Q  131 ttgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||||||||||| | ||||| ||||| |||||||||||| ||||| ||||||    
T  21671465 ttgtatttgatgtactctatcactttgaatgaataaatatcgttttgattttgt 21671518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 35395588 - 35395523
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattca 97  Q
    ||||||||| |||||||||| | |||||||||||| |||  ||||| || |||||| |||||||||    
T  35395588 ttatttgtatgcattttgtcgtcgtatgctattaactttagtgttgcaagtttgttcgcagattca 35395523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 45418758 - 45418811
Alignment:
Q  131 ttgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||| ||||||||| ||||||||||| ||||| |||||| ||||| ||||||    
T  45418758 ttgtatatgatgtattctatcaatttgagtgaattaatatcgttttgtttttgt 45418811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 2115498 - 2115418
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | |  ||| | |||||| |||||||||  ||||||||||||||||    
T  2115498 tttgtaggcattatgtcgttatatgctattaacttggatactgtgagtttgttcgcagattcatcctttatgtttttagcg 2115418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 9528787 - 9528707
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| ||   |||||| | |||||| |||||||||  ||||| ||||||||||    
T  9528787 tttgtaggcattatgtcgttatatgctattaacttgaatgttgtgagtttgttcgcagattcatcctttacgtttttagcg 9528707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 21686195 - 21686091
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||| |  |||||| |||||| || | || ||| | |||||| ||| |||||| ||||| |||| |    
T  21686195 gtgatttaggttttatcatattatttgtaggcattttgccgctgtatgttattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttgt 21686096  T
Q  112 agcga 116  Q
    |||||    
T  21686095 agcga 21686091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 52060871 - 52060775
Alignment:
Q  17 tttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttag 113  Q
    ||||| |||||||  || ||||||||||||||||  |||||| ||||||| ||   |||| | | |||||||||||||||||| ||||  |||||||    
T  52060871 tttgaatttatcatattttttgtaggcattttgttgttgtatactattaatttgaatgttatgagtttgtttgcagattcacattttacatttttag 52060775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 10237169 - 10237011
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    |||||| ||||| ||||  |||||||||||||||||||| |||||||||||||| || | |||||| | |||||| |||||||||| || || |||||||    
T  10237169 tgatttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgttttta 10237070  T
Q  113 gcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    |||| ||||||||||| ||||| | ||||||||| ||||||||||| ||||| ||||||    
T  10237069 gcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 10237011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 14955676 - 14955847
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    |||||| ||||||||||  |||||||||| |||||| |||||||||| |||||| || | |||||| | |||||| |||||||||  |||||| ||||||    
T  14955676 tgatttagattttatcatattatttgtagacattttatcattgtatgttattaacttaggtgttgtgagtttgttcgcagattcatcctttatattttta 14955775  T
Q  113 gcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||| ||||||||||| ||||| | | ||||||| ||||||||| | ||||| |||||||||||| ||||||    
T  14955776 gcgatattgatcatgttattgtctcttatgtattctatcaatttaaatgaatgaatatcattttgtttttgt 14955847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 3309084 - 3309249
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| |||||||  |||| ||||  |||||||||| ||||||| | |||||||||||||| || | || ||| | ||| || |||||||||| || ||    
T  3309084 tattctggtgatttatatttcatcatattatttgtagtcattttgccgttgtatgctattaacttgggtgctgtgagtttattcgcagattcaccctata 3309183  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatat 170  Q
     ||||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| ||||| |||||    
T  3309184 cgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatat 3309249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 28533917 - 28533764
Alignment:
Q  3 gatattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactt 102  Q
    |||||||  ||||||| ||||||||||  ||||||||||| |||||||| |||||||||||||| ||   |||||| | |||||| |||||| |||  ||    
T  28533917 gatattcgggtgatttggattttatcatattatttgtaggtattttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgcagatccaccttt 28533818  T
Q  103 tatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaattt 156  Q
    || ||||||| |||  |||||||||| |||| || ||||||||| |||||||||    
T  28533817 tacgtttttaacgatgttgatcatgttattgaatctgatgtattctatcaattt 28533764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 6358835 - 6358676
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||||||||  ||||||||| | |||||||| |||||||||||||| || | |||||| | ||| || | ||||||||  |||| ||||||    
T  6358835 gtgatttagattttatcatattatttgtacgtattttgtcgttgtatgctattaacttgggtgttgtgagttttttcgtagattcactatttacgttttt 6358736  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    |  || |||||||| || ||||||| |||||||||  |||||||||| ||||| ||||||    
T  6358735 aatgatattgatcaagttattgtatctgatgtattccatcaatttgaatgaatgaatatc 6358676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 12554125 - 12553970
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatg-tttttagcgacatt 120  Q
    ||||||||  |||||||||||||||||||| ||||||| |||||| || | |||||| | |||||| |||||||||| ||||| | |||||||| |  ||    
T  12554125 ttttatcatattatttgtaggcattttgtcgttgtatgatattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttttagcaatgtt 12554026  T
Q  121 gatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    ||  |||| ||||||| |||| || | ||||||||||| ||||| |||||||||||    
T  12554025 gaatatgttattgtatctgatatactctatcaatttgaatgaatgaatatcatttt 12553970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 1421822 - 1421922
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||||| |||||||||||||| || | |||||| | ||||||||||||||||| ||||| ||||||    
T  1421822 gtgatttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcac-ctttacgttttt 1421920  T
Q  112 ag 113  Q
    ||    
T  1421921 ag 1421922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 19595856 - 19595681
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctatta---aatttgttgttgtaaatttgtttgcagattca-cactttatgtt 108  Q
    |||||||||||||||||  ||||||||||| |||||| | |||||||||||||   | || | || ||| | |||||||||||||| | || |||   ||    
T  19595856 tgattttgattttatcatattatttgtaggtattttgcctttgtatgctattattaacttggatgctgtgagtttgtttgcagatttatcatttttcttt 19595757  T
Q  109 tttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||||  |||||||||| ||||||| |||| |||||||||||||||| || || |||||| |||| |||||||    
T  19595756 tttagcgatcttgatcatgttattgtatctgatatattatatcaatttgaatgcatgaatatcgttttacttttgt 19595681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 14416381 - 14416473
Alignment:
Q  92 gattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||||  |||| ||| |||||||  |||| ||||| ||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  14416381 gattcaccatttacgttgttagcgatgttgaacatgttattgtatctgatgtattctatcaatttgaatgaataaatatcattttgtttttgt 14416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 10929804 - 10929915
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| |||||||  |||||||||  |||||| ||||||||||||  ||| |||||||||| || | || ||| | |||||||||| |||||| |||||    
T  10929804 tattctggtgatttaaattttatcatattatttataggcattttgttgttgaatgctattaacttggatgctgtgagtttgtttgcatattcacccttta 10929903  T
Q  105 tgtttttagcga 116  Q
    ||||||||||||    
T  10929904 tgtttttagcga 10929915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 7646634 - 7646728
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||||||||||  |||| |||||||||||    
T  7646634 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccttttacgtttttagcga 7646728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 18763624 - 18763718
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | || ||||||||||| || | |||||| | |||||| |||||||||| ||||| |||||||||||    
T  18763624 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga 18763718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 37416849 - 37417013
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    ||||||||||||||  |||||||||  |||||||||| ||||||| | ||||||| | |||| || | |||| ||| |||||| ||| |||||| |||||    
T  37416849 tattctagtgatttatattttatcatattatttgtagacattttgccgttgtatgttgttaacttgggtgttataagtttgttcgcacattcac-cttta 37416947  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatat 170  Q
    |||||| | | |  |||||||||| |||| || | |||||||  |||||||||| ||||| |||||    
T  37416948 tgttttaaacaatgttgatcatgttattggatctaatgtattccatcaatttgaatgaatgaatat 37417013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 31788622 - 31788706
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||| ||||| |||||||||||    
T  31788622 ttatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcaccctttacgtttttagcga 31788706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 34128630 - 34128466
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacat 119  Q
    ||||||||||  |||||| |||||||||||||   ||||| |||||| || | | |||| |  |||||||||||||||| |||||  ||||| |||| ||    
T  34128630 gattttatcatattatttataggcattttgtcgcagtatgttattaacttggatattgtgaggttgtttgcagattcaccctttacattttttgcgatat 34128531  T
Q  120 tgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||| ||| | |||| ||||||| || | || |||||||| |||||||||||  ||||| ||||||    
T  34128530 tgaacatattattggatttgatttaatttaacaatttgaatgaataaatattgttttgtttttgt 34128466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 36692020 - 36692124
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||| | || ||||||||||| || |||||||| | ||||||  ||||||||| ||||| ||| ||    
T  36692020 gtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttggttgttgtgagtttgttcacagattcaccctttacgttctt 36692119  T
Q  112 agcga 116  Q
    |||||    
T  36692120 agcga 36692124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 41694761 - 41694924
Alignment:
Q  6 attctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttat 105  Q
    ||||| |||| || ||||||||||  |||||| ||||||||||||| || |||| |||||| |||| |||| ||| ||||||  || |||||   ||||     
T  41694761 attctggtgacttagattttatcatattatttataggcattttgtcgttatatgttattaactttggtgtt-taagtttgttcacaaattcatcatttac 41694859  T
Q  106 gtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatat 170  Q
    |||||||||||  |||| ||||| |||| || |||| || ||||| ||||||| |||||||||||    
T  41694860 gtttttagcgatgttgaacatgttattgcatatgatatactatattaatttgaatgaataaatat 41694924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 27097351 - 27097260
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttag 113  Q
    ||||||||  ||||||||||| |||||| | |||||| ||||||| || | |||||| | ||||||||||||||||| ||||| ||||||||    
T  27097351 ttttatcatattatttgtaggaattttgccgttgtatactattaacttgggtgttgtgagtttgtttgcagattcaccctttacgtttttag 27097260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 35220495 - 35220578
Alignment:
Q  33 tatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||||||||||||| |||||||||||||| || | || ||| | |||||| ||| |||||| ||||| |||||||||||    
T  35220495 tatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcga 35220578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 4100492 - 4100585
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | ||||||| |||| || ||| |||||| | |||||| |||||||||| ||||| |||||||||||    
T  4100492 ttttatcatattatttgtaggcattttgccgttgtatgatatt-aacttggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga 4100585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 4778909 - 4779003
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | ||||||| |||||| || | || ||| | |||||| |||||||||| ||||| |||||||||||    
T  4778909 ttttatcatattatttgtaggcattttgccgttgtatgttattaatttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcga 4779003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 4904091 - 4903997
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||||  |||||||||| ||||||||| |||||||||||||| || | |||||| | |||||| | |||||||  ||||| |||||||||    
T  4904091 gattttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttcgtagattcagcctttacgtttttagc 4903997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 38445322 - 38445412
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||  |||||||||||||||||| ||||||||| |||||| |||| || ||| | |||||| |||||||||  ||||| |||||||    
T  38445322 ttttatcatattatttgtaggcattttgccattgtatgttattaactttggtgctgtgagtttgttcgcagattcatcctttacgttttta 38445412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 37876551 - 37876399
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacatt 120  Q
    |||||||||  |||||||||||||||||| | | |||||||||||| || | || ||  | |||||| ||||||||||  ||||||||||||||||        
T  37876551 attttatcatattatttgtaggcattttgccgtcgtatgctattaacttgggtgatgcgagtttgttcgcagattcaccatttatgtttttagcga---- 37876456  T
Q  121 gatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
           || |||||||||||||| | ||||||||||| ||||| |||||| ||||| ||||||    
T  37876455 -------tgtttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgt 37876399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 7604325 - 7604401
Alignment:
Q  15 attttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgca 91  Q
    |||||||||| ||||  |||||  ||| |||||| ||||||||||||||||| || | |||||||||||||||||||    
T  7604325 attttgatttcatcatattattcatagacattttatcattgtatgctattaacttggatgttgtaaatttgtttgca 7604401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 164
Target Start/End: Complemental strand, 18107684 - 18107552
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgat 131  Q
    |||||||||||||||||||| || |||  |||||| ||   |||||| | |||||| ||| |||||| ||||| |||||||| || | ||| ||||| ||    
T  18107684 ttatttgtaggcattttgtcgttttatattattaacttgcgtgttgtgagtttgttcgcatattcactctttacgtttttagtgataatgaacatgttat 18107585  T
Q  132 tgtatttgatgtattatatcaatttgattgaat 164  Q
    | ||| ||||||| | ||||||||||| |||||    
T  18107584 tatatgtgatgtactctatcaatttgaatgaat 18107552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 24461589 - 24461693
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||| ||||  || |||||||| |||||||| || ||||||||||| |||| |||||| | |||||| |||| ||||  ||||| ||||||    
T  24461589 gtgatttagatttcatcatattttttgtaggtattttgtcgttatatgctattaactttggtgttgtgagtttgttcgcaggttcatcctttacgttttt 24461688  T
Q  112 agcga 116  Q
    |||||    
T  24461689 agcga 24461693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 29173651 - 29173567
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||| |||||||||  ||||||| |||||| |||| |||||| | |||||| |||||||||  ||||| |||||||||||    
T  29173651 ttatttgtatgcattttgttgttgtatgttattaactttggtgttgtgagtttgttcgcagattcatcctttacgtttttagcga 29173567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 10792759 - 10792712
Alignment:
Q  128 tgattgtatttgatgtattatatcaatttgattgaataaatatcattt 175  Q
    |||||||||||||||||||| |||||||||| || |||||||||||||    
T  10792759 tgattgtatttgatgtattaaatcaatttgaatggataaatatcattt 10792712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 17249108 - 17248997
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| |||| |||||  |||||||||| ||||||| | |||||||||||||| || | || ||| | |||||| |||||||||   ||||    
T  17249108 tattctggtgatttagattatatcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcattta 17249009  T
Q  105 tgtttttagcga 116  Q
     |||||||||||    
T  17249008 cgtttttagcga 17248997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 29279515 - 29279420
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||||  |||||||||||||||||| | || ||||||||||| | || |||||| | |||||| ||| ||||||  |||| |||||||||||    
T  29279515 attttatcatattatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgttcgcatattcaccatttacgtttttagcga 29279420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 37994430 - 37994515
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattca 97  Q
    ||||||| ||||||||||  ||||||||||||||||||   || ||||||||||| || | |||||| | |||||| |||||||||    
T  37994430 gtgatttagattttatcatattatttgtaggcattttgctgttatatgctattaacttgggtgttgtgagtttgttcgcagattca 37994515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 3465560 - 3465640
Alignment:
Q  91 agattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    |||||||| || |||||||||||| | ||||||||||| ||||| | |||| |||| ||||||||| | ||||| ||||||    
T  3465560 agattcactctatatgtttttagcaatattgatcatgttattgtctctgatatattctatcaatttaaatgaatgaatatc 3465640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 9986252 - 9986172
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | |||||| | |||||| |||||||||  ||||| ||||||||||    
T  9986252 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcg 9986172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 19062279 - 19062199
Alignment:
Q  34 atttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    |||||||||||||||| | |||||||||||||| || | || ||| | |||| | |||||||||| ||||| |||||||||    
T  19062279 atttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgctcgcagattcaccctttacgtttttagc 19062199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 21570318 - 21570238
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| || | |||||||||||||| ||   || ||||| |||||| |||||||||  ||||||||||||||||    
T  21570318 tttgtaggcattatgccgttgtatgctattaacttgaatgctgtaagtttgttcgcagattcagcctttatgtttttagcg 21570238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 3460526 - 3460585
Alignment:
Q  106 gtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaata 165  Q
    ||||||||||| ||||||||||| ||||| | |||| |||| ||||||||||| ||||||    
T  3460526 gtttttagcgatattgatcatgttattgtctctgatatattctatcaatttgaatgaata 3460585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 30399985 - 30399898
Alignment:
Q  10 tagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattca 97  Q
    |||||| || ||||||||||  |||||||||||||||||| | | |||||  ||||| || | |||||||| |||||| |||||||||    
T  30399985 tagtgacttagattttatcatattatttgtaggcattttgccgtcgtatgtcattaacttaggtgttgtaagtttgttcgcagattca 30399898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 32197573 - 32197534
Alignment:
Q  138 tgatgtattatatcaatttgattgaataaatatcattttg 177  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  32197573 tgatgtattatatcaatttgaatgattaaatatcattttg 32197534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 5427813 - 5427719
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  ||||||| | ||||||| || |||||||||||||| || | || ||| | |||||| |||||||||| ||||| | |||||||||    
T  5427813 ttttatcatattatttgcaagcattttatcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgcttttagcga 5427719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 7677817 - 7677723
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||| ||||||||||| | |||||||||||||| || | || ||| | ||||||||||  |||||  |||| |||||||||||    
T  7677817 ttttatcatattatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcaagttcaccttttacgtttttagcga 7677723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 11985177 - 11985083
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  ||||||||||||||||||   |||||| ||||||| || | |||||| |||||||| ||| |||||   |||| |||||||||||    
T  11985177 ttttatcatattatttgtaggcattttgctgttgtatcctattaacttggatgttgtgaatttgttcgcaaattcatcatttacgtttttagcga 11985083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 25509002 - 25508861
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgat 131  Q
    |||||||||||||||||| | ||||||| |||||| || | || ||| | |||||| |||||||||   |||||||||||| |||           || |    
T  25509002 ttatttgtaggcattttgccgttgtatgttattaacttgggtgatgtgagtttgttcgcagattcatcgtttatgtttttaccga-----------tgtt 25508914  T
Q  132 tgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||| ||||||| | ||||||||||| |||||||||||| ||||| ||||||    
T  25508913 tgtatatgatgtactctatcaatttgaatgaataaatatcgttttgtttttgt 25508861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 32448456 - 32448410
Alignment:
Q  138 tgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||||| ||||||||||| ||||| |||||||||||| ||||||    
T  32448456 tgatgtattctatcaatttgaatgaatgaatatcattttgtttttgt 32448410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 33585679 - 33585589
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||  ||||||||| |||||||| | |||||||||||||| || | |||||| | |||||| ||| |||||  ||||| |||||||    
T  33585679 ttttatcatattatttgtatgcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcctttacgttttta 33585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 41327905 - 41327939
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||||||||||||||||| ||||||||||||||||    
T  41327905 ttatttgtaggcattttggcattgtatgctattaa 41327939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 8806037 - 8806118
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||||||||| | || ||||||||||| || | |||||| |  ||||| |||||||||  ||||| |||||||||||    
T  8806037 tttgtaggcattttgccgttatatgctattaacttggatgttgtgagattgttcgcagattcatcctttacgtttttagcga 8806118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 14423552 - 14423633
Alignment:
Q  89 gcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatat 170  Q
    ||||||| || |||||||||||||||||  |||| ||| || || ||||| ||||||| ||||||||| | |||||| ||||    
T  14423552 gcagatttaccctttatgtttttagcgatgttgaacatatgtttatattttatgtattctatcaatttcaatgaatacatat 14423633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 17151581 - 17151702
Alignment:
Q  23 tttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattga 122  Q
    |||||||  ||||| ||||| |||||||  |||||||||||||| ||   |||||| | |||||  ||| |||||| ||||| ||||||| |||  ||||    
T  17151581 tttatcatattattagtaggtattttgttgttgtatgctattaacttgaatgttgtgagtttgtccgcatattcaccctttacgtttttaacgattttga 17151680  T
Q  123 tcatgtgattgtatttgatgta 144  Q
     ||||| ||||||| |||||||    
T  17151681 acatgttattgtatctgatgta 17151702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 43397062 - 43396970
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    ||||||||  ||||||||| |||||||| | || ||||||||||| || | |||||| | |||| || ||||||||| ||||| ||||||||||    
T  43397062 ttttatcatattatttgtacgcattttgccgttttatgctattaacttgggtgttgttagtttg-ttccagattcaccctttacgtttttagcg 43396970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 4228294 - 4228374
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | |||||| | |||||| |||||||||  |||||  |||||||||    
T  4228294 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcg 4228374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 32190813 - 32190905
Alignment:
Q  15 attttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgt 107  Q
    ||||| |||||||||  ||||||||| |||||||   ||||||||||||||| ||   |||||| | ||| |||||||||||||  |||||||    
T  32190813 attttcattttatcatattatttgtaagcatttttctattgtatgctattaacttaaatgttgtgagtttatttgcagattcaccatttatgt 32190905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 39284385 - 39284341
Alignment:
Q  138 tgatgtattatatcaatttgattgaataaatatcattttgctttt 182  Q
    ||||||| ||||||||||||| |||||||||| ||||||| ||||    
T  39284385 tgatgtaatatatcaatttgaatgaataaataccattttgttttt 39284341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 44044080 - 44044040
Alignment:
Q  136 tttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    ||||||||||| ||||||||| | |||||||||||||||||    
T  44044080 tttgatgtattctatcaattttaatgaataaatatcatttt 44044040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 30776793 - 30776963
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||||||||  |||||||||||||||||| | | | |||||||||| || | |||||| | |||||| |||||||||| |||||    
T  30776793 tattctggtgatttagattttatcatattatttgtaggcattttgccgtggaatgctattaacttgggtgttgtgagtttgttcgcagattcacccttta 30776892  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattt 175  Q
     ||||||||||| ||||||||||| ||||| | ||| ||||| ||||||| ||| ||||| ||||||||||    
T  30776893 cgtttttagcgatattgatcatgttattgtctctgacgtattctatcaatatgaatgaatgaatatcattt 30776963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 171
Target Start/End: Original strand, 8102855 - 8103022
Alignment:
Q  4 atattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttt 103  Q
    |||||||  |||||| ||||||||||  |||||||||||||||||| | | | ||| |||||| || | || ||| | |||||||||||||||||  |||    
T  8102855 atattctgatgatttagattttatcatattatttgtaggcattttgccgtggaatgttattaacttgggtgctgtgagtttgtttgcagattcacctttt 8102954  T
Q  104 atgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    | ||||||||||| ||||||||||| ||||| | ||||||||| ||||||| ||| ||||| ||||||    
T  8102955 acgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatatgaatgaatgaatatc 8103022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 14801964 - 14802123
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacact-ttatgtttt 110  Q
    ||||||| ||||| ||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||| || ||| |||||    
T  14801964 gtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcactctattacgtttt 14802063  T
Q  111 tagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatat 170  Q
    |||||| ||| ||||||| ||||| | ||||||||| ||||||||||| ||||| |||||    
T  14802064 tagcgatattaatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatat 14802123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 546161 - 546321
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||| ||| ||||| ||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||  || ||    
T  546161 tattctggtggtttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctata 546260  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaata 165  Q
     ||||||||||| ||||||||||| ||||| | |||| |||| ||||||||||| ||||||    
T  546261 cgtttttagcgatattgatcatgtcattgtgtctgatatattctatcaatttgaatgaata 546321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 53 - 183
Target Start/End: Original strand, 679286 - 679416
Alignment:
Q  53 ttgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatca 152  Q
    |||||||||||||| || | |||||| | |||||| | |||||||| ||||| ||||||||| |  ||||| |||| ||||||| ||||||||| |||||    
T  679286 ttgtatgctattaacttaggtgttgtgagtttgttcgtagattcaccctttacgtttttagcaatgttgattatgttattgtatctgatgtattctatca 679385  T
Q  153 atttgattgaataaatatcattttgcttttg 183  Q
    |||||| |||||||||| ||||||| |||||    
T  679386 atttgaatgaataaataacattttgtttttg 679416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 3913527 - 3913423
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||| |||||||||||||||| || | |||||| | |||||| |||||| ||| ||||| ||||||    
T  3913527 gtgatttaggttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagatgcaccctttacgttttt 3913428  T
Q  112 agcga 116  Q
    |||||    
T  3913427 agcga 3913423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 32060033 - 32060117
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||||||||||||||||| |||||||||||||| | |||||||| |||||| ||||||| || |||||  ||||||||||    
T  32060033 ttatttgtaggcattttgtcattttatgctattaaattggatgttgtaagtttgttcgcagatttaccctttacatttttagcga 32060117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 9380160 - 9380306
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||||||||  ||||||||| |||||||||| |||||| ||||||  || | |||||| | |||||| ||| ||||||  ||||  |||||    
T  9380160 gtgatttagattttatcatattatttgtatgcattttgtcgttgtattctattatcttggatgttgtgagtttgttcgcatattcaccatttacattttt 9380259  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttga 158  Q
    | | |  |||||||||| || ||||||||| ||||||||||||||||    
T  9380260 atcaatgttgatcatgttatagtatttgatatattatatcaatttga 9380306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 26588425 - 26588296
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||||||||||||||  |||||| ||| |||||||   ||||||||| |||| || | ||| || | ||||||||||| ||||| ||||| ||||||    
T  26588425 gtgattttgattttatcatattatttttagacattttgctgttgtatgctcttaacttggatgtcgtgagtttgtttgcagcttcaccctttaagttttt 26588326  T
Q  112 agcgacattgatcatgtgattgtatttgat 141  Q
    |||||  |||||||||| ||||||| ||||    
T  26588325 agcgatgttgatcatgttattgtatatgat 26588296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 9341594 - 9341502
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||  || ||||||||||||||||| |||||||||||||| || | |||||| | |||||| |||||||||| ||||| |||||||||    
T  9341594 ttttatcatattgtttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagc 9341502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 30493669 - 30493773
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    |||||||  |||||||||  || ||||||||||||||| | ||||||||||||||  | | |||||| |||||||| |||||||||| ||||| ||||||    
T  30493669 gtgatttatattttatcatgttgtttgtaggcattttgccgttgtatgctattaacctgggtgttgtgaatttgttcgcagattcaccctttacgttttt 30493768  T
Q  112 agcga 116  Q
    |||||    
T  30493769 agcga 30493773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 606351 - 606441
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| || | || ||| | |||||| |||||||||| ||||| |||||||    
T  606351 ttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgttttta 606441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 528310 - 528249
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||||||||||||| ||||||||||  ||||||||||| |||||||| ||||||||||||||    
T  528310 tattctagtgatttagattttatcatattatttgtaggtattttgtcgttgtatgctattaa 528249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 29743127 - 29743261
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgta---tgctattaaatttgttgttgtaaatttgtttgcagattcacact 101  Q
    |||||| ||||||| ||| ||||||  |||||| ||||||||||||| |||||   || |||||| || |||||||| | ||||||  || |||||| ||    
T  29743127 tattctggtgatttagatcttatcatattatttataggcattttgtcgttgtaatatgttattaacttggttgttgtgagtttgttctcaaattcaccct 29743226  T
Q  102 ttatgtttttagcgacattgatcatgtgattgtat 136  Q
    ||| ||||||||||| |||||| |||| |||||||    
T  29743227 ttacgtttttagcgatattgatgatgttattgtat 29743261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 31851756 - 31851673
Alignment:
Q  101 tttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||||||||||||  |||||| ||| |||| || ||||||||| ||||||||||| ||||| ||||| |||||| ||||||    
T  31851756 tttatgtttttagcgatgttgatcttgttattgcatctgatgtattctatcaatttgaatgaatgaatattattttgtttttgt 31851673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 23128765 - 23128859
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||| |||||  ||||||||||    
T  23128765 ttttatcatattatttgtaggcattttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcaccctttacatttttagcga 23128859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 20225999 - 20226092
Alignment:
Q  23 tttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||  |||||||||||||||||||| |||||||||||||| || | | |||| | |||||| ||| |||||   ||||||||||||||||    
T  20225999 tttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcga 20226092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 22119983 - 22120076
Alignment:
Q  23 tttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||  |||||||||||||||||||| |||||||||||||| || | | |||| | |||||| ||| |||||   ||||||||||||||||    
T  22119983 tttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcga 22120076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 67944 - 67852
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||  |||||| ||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||| ||||| |||||||||    
T  67944 ttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagc 67852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 32191689 - 32191625
Alignment:
Q  6 attctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaattt 70  Q
    ||||| ||||||| ||||||||||    |||||||||||||||| ||||||||||||||||||||    
T  32191689 attctggtgatttagattttatcatacaatttgtaggcattttgccattgtatgctattaaattt 32191625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 33053111 - 33053019
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| ||| |||||| ||||| |||||||||    
T  33053111 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacgtttttagc 33053019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 7976117 - 7976038
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||| |||||  |||||||||||||||    
T  7976117 tttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttgttcgcatattcatcctttatgtttttagc 7976038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 31296950 - 31297061
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| |||||||  |||||||||  || ||||||||||||||||| |||||||||||||| || | || | | | |||||| |||  ||||| |||||    
T  31296950 tattctggtgatttatattttatcatattgtttgtaggcattttgtcgttgtatgctattaatttggatgatttgagtttgttcgcattttcacccttta 31297049  T
Q  105 tgtttttagcga 116  Q
     |||||||||||    
T  31297050 cgtttttagcga 31297061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 1523538 - 1523599
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||||| ||||||| ||||||||||  |||||||||||||||||||| | | ||||||||||    
T  1523538 tattctggtgatttagattttatcatattatttgtaggcattttgtcgtggaatgctattaa 1523599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 28981317 - 28981418
Alignment:
Q  15 attttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    |||| ||||||||||  ||  ||||||| |||||||  |||||||||||||| |||| |||||| | ||||||  || |||||| ||||| |||||||||    
T  28981317 atttagattttatcatattgcttgtaggaattttgttgttgtatgctattaactttggtgttgtgagtttgttcacatattcaccctttacgtttttagc 28981416  T
Q  115 ga 116  Q
    ||    
T  28981417 ga 28981418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 25064403 - 25064483
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | |||||| | |||||| |||||||||  ||||| ||||||||||    
T  25064403 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcg 25064483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 30608459 - 30608368
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    |||||||||  |||||||||||||||||  | |||||||||||||| || | |||||| |  ||||||||| |||||  ||||| |||||||    
T  30608459 attttatcatattatttgtaggcattttaccgttgtatgctattaacttggatgttgtgagattgtttgcaaattcatcctttacgttttta 30608368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 32327170 - 32327069
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||| |   |||||||||||| || | || ||| | |||||| ||| |||||| ||||| ||||||    
T  32327170 gtgatttaggttttatcatattatttgtaggcattttgcc---gtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgttttt 32327074  T
Q  112 agcga 116  Q
    |||||    
T  32327073 agcga 32327069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 6957339 - 6957420
Alignment:
Q  73 tgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaat 154  Q
    |||||| | ||||||  ||||||||| ||||| |||||||||||  |||| ||| | ||||||||||||||| | |||||||    
T  6957339 tgttgtgagtttgttcacagattcaccctttacgtttttagcgatgttgaacatattattgtatttgatgtactctatcaat 6957420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 176
Target Start/End: Complemental strand, 10085034 - 10084941
Alignment:
Q  83 ttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    ||||| |||||||||   |||| | ||||| |||| ||||| |||| ||| ||| ||||||||| ||||||||||| ||||| ||||| |||||    
T  10085034 ttgttggcagattcatcttttacgattttaacgacgttgatgatgttattctatctgatgtattctatcaatttgaatgaatgaatattatttt 10084941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 29319807 - 29319726
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||| |||||||  | |||||||||||||| || |||||| | | |||||| ||||||||||  |||| |||||||||||    
T  29319807 tttgtaagcattttaccgttgtatgctattaacttggttgttatgagtttgttcgcagattcaccttttacgtttttagcga 29319726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 33053013 - 33052960
Alignment:
Q  131 ttgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||||||||||| | ||||||||||| ||||| |||||| ||||| ||||||    
T  33053013 ttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgt 33052960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 4984477 - 4984397
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||  || ||||||||||| || | || ||||| |||||| |||||||||  ||||| ||||||||||    
T  4984477 tttgtaggcattatgttgttatatgctattaacttagatgatgtaagtttgttcgcagattcatcctttacgtttttagcg 4984397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 8028028 - 8027948
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| || |||| ||||||||||| |||| || ||| | |||||| ||| |||||  ||||| ||||||||||    
T  8028028 tttgtaggcattatgccattatatgctattaactttgatgatgtgagtttgttcgcaaattcatcctttacgtttttagcg 8027948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 12059683 - 12059603
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||| ||| |||| || ||||||||||| || | |||||| | |||||| |||||||||  ||||| ||||||||||    
T  12059683 tttgtaggaattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcg 12059603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 17237196 - 17237116
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | |||||| | | |||| |||||||||  ||||| ||||||||||    
T  17237196 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtgtgttcgcagattcatcctttacgtttttagcg 17237116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 21426619 - 21426535
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||||| ||||||| | |||||||||||||| || | || ||| | |||||| ||| ||||||  |||| |||||||||||    
T  21426619 ttatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccgtttacgtttttagcga 21426535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 29255391 - 29255295
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||||  ||||||||||||||||     |||||||||||||| || | |||||| | ||||||  ||||||||| | ||| |||||||||||    
T  29255391 gattttatcatattatttgtaggcatttcactgttgtatgctattaacttgggtgttgtgagtttgttcacagattcacccattacgtttttagcga 29255295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 29744477 - 29744533
Alignment:
Q  128 tgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||||| ||||||||| ||||||||||| ||||| |||||  |||||| |||||    
T  29744477 tgattgtatctgatgtattctatcaatttgaatgaatgaatattgttttgcctttgt 29744533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 48750317 - 48750483
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||| |||||| || ||    
T  48750317 tattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcaccctata 48750416  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
     ||||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| ||||| ||||||    
T  48750417 cgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 48750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 36775663 - 36775504
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||| ||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| |||||||||| || || ||||||    
T  36775663 gtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacgttttt 36775564  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    ||||| ||||||||||| ||||| | |||||||||  |||||||||| ||||| ||||||    
T  36775563 agcgatattgatcatgttattgtctctgatgtattcaatcaatttgaatgaatgaatatc 36775504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 16161968 - 16162127
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatg-ttttt 111  Q
    |||||| ||||||||||  |||||||||||||||||| | | | |||||||||| || | |||||| | |||||| |||||||||| ||||| | |||||    
T  16161968 tgatttagattttatcatattatttgtaggcattttgccgtggaatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacgtttttt 16162067  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
    | | ||||||||||| | ||||| | ||||||||| ||||||| ||| ||||| ||||||    
T  16162068 accaacattgatcatattattgtctctgatgtattctatcaatatgaatgaatgaatatc 16162127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 34413052 - 34412923
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  ||||||||||||||||||   ||||||| |||||| || | |||||| | |||||| |||||||||| || ||    
T  34413052 tattctggtgatttagatttcatcatattatttgtaggcattttgcggttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctata 34412953  T
Q  105 tgtttttagcgacattgatcatgtgattgt 134  Q
     ||||||||||| ||||||||||| |||||    
T  34412952 cgtttttagcgatattgatcatgttattgt 34412923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 7337616 - 7337512
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||||| ||||||||  ||||||||||||||||||   ||| |||||||||| || | |||||| | |||||| |||||||||| |||||| |||||    
T  7337616 gtgattttggttttatcatattatttgtaggcattttgctgttgcatgctattaacttggctgttgtgagtttgttcgcagattcaccctttatattttt 7337517  T
Q  112 agcga 116  Q
    |||||    
T  7337516 agcga 7337512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 19061041 - 19061152
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| |||| |||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||| |||||   ||||    
T  19061041 tattctggtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcacattcatctttta 19061140  T
Q  105 tgtttttagcga 116  Q
    ||||||||||||    
T  19061141 tgtttttagcga 19061152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 44543404 - 44543515
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||||||||||| |||| |||||  |||||||||||||||||| | || ||||||||||| || | || ||| | |||||| |||||||||  |||||    
T  44543404 tattctagtgatttagattatatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatccttta 44543503  T
Q  105 tgtttttagcga 116  Q
     |||||||||||    
T  44543504 cgtttttagcga 44543515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 51373802 - 51373711
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    |||||||||  |||||||||||||||||||| | |||||||||||| || | |||||| | |||||||| |||||||| ||||| |||||||    
T  51373802 attttatcatattatttgtaggcattttgtcgtcgtatgctattaacttgggtgttgtgagtttgtttggagattcaccctttacgttttta 51373711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 14489404 - 14489545
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||||||||  ||||||||||| |||||||  ||||||| |||||| || | | |||  | ||| || ||| |||||| |||||    
T  14489404 tattctggtgatttagattttatcatattatttgtaggtattttgttgttgtatgttattaacttgggtattgagagtttattagcatattcacccttta 14489503  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtatt 146  Q
     |||||||||||  || ||||||| |||||||||||| ||||    
T  14489504 cgtttttagcgatgttaatcatgtcattgtatttgatatatt 14489545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 32873812 - 32873731
Alignment:
Q  17 tttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcac 98  Q
    |||||||||||||  |||||||||| ||| |||||||||||||||||||| ||||   |||| |||||||| ||||||||||    
T  32873812 tttgattttatcatattatttgtagacatattgtcattgtatgctattaattttggcattgtgaatttgttcgcagattcac 32873731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 24583277 - 24583389
Alignment:
Q  4 atattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttt 103  Q
    ||||||| ||||||| |||| |||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||  ||||    
T  24583277 atattctggtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatccttt 24583376  T
Q  104 atgtttttagcga 116  Q
    |  ||||||||||    
T  24583377 acatttttagcga 24583389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 13075615 - 13075437
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||||||||||| ||||||||||  ||||||||| ||||||   | ||||||||||| ||||| | | |||| |  || || |||||||||| |||||    
T  13075615 tattctagtgatttagattttatcatattatttgtaagcatttaccctttgtatgctat-aaattgggttttgtgagatttttcgcagattcacccttta 13075517  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
      |||||||||| |||||| |||| ||||||| | || |||| |||||| || | ||||| | |||  ||||||||||||    
T  13075516 cttttttagcgatattgattatgttattgtatctaatatattctatcaacttaaatgaatgagtattgttttgcttttgt 13075437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 49627053 - 49627156
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    |||||| |||| |||||  |||||||||| ||||||| | |||||||||||||| || | |||||| | |||||| |||||||||  ||||| |||||||    
T  49627053 tgatttagattatatcatcttatttgtagacattttgccgttgtatgctattaatttgggtgttgtgagtttgttcgcagattcatcctttacgttttta 49627152  T
Q  113 gcga 116  Q
    ||||    
T  49627153 gcga 49627156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 31919138 - 31919232
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||| ||||||||| |||||||||||||| || | |||||  | |||||| |||||||||  ||||| |||||||||||    
T  31919138 ttttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacgtttttagcga 31919232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 13144766 - 13144673
Alignment:
Q  11 agtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    ||||| || ||||||||||   ||||||||||||||||| |||| ||||||||||| || | |||||| | |||||| |||||||||| |||||    
T  13144766 agtgacttagattttatcataatatttgtaggcattttgccattttatgctattaacttggatgttgtgagtttgttcgcagattcacccttta 13144673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 12635337 - 12635413
Alignment:
Q  40 aggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||||||| |||||||||||||| || | |||||| | |||||| | ||||||||  ||||||||||||||||    
T  12635337 aggcattttgtcgttgtatgctattaacttggatgttgttagtttgttcggagattcaccttttatgtttttagcga 12635413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 24583081 - 24583193
Alignment:
Q  4 atattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttt 103  Q
    ||||||| ||||||| |||| |||||  |||||||||||||||||| | ||||||| |||||| || | || ||| | ||||||  ||||||||  ||||    
T  24583081 atattctggtgatttagattatatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgatgtgagtttgttcacagattcatccttt 24583180  T
Q  104 atgtttttagcga 116  Q
    | |||||||||||    
T  24583181 acgtttttagcga 24583193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 35484344 - 35484240
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  ||||||||| |||||||| | |||||||||||||| || | |||||| | |||||| |||||||| | |||||  |||||    
T  35484344 gtgatttcggttttatcatattatttgtaagcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcgccctttacattttt 35484245  T
Q  112 agcga 116  Q
    |||||    
T  35484244 agcga 35484240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 50616628 - 50616456
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    |||||||  |||||||||  ||||||||||  |||||| | ||| |||||| | | || | |||||| | |||| |  |||||||||  |||| ||||||    
T  50616628 gtgatttaaattttatcatattatttgtagatattttgcctttgcatgctaatgacttggatgttgtgagtttgctcacagattcacgttttacgttttt 50616529  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||| |  |||||||||| ||| ||| | ||||||| ||||||||| | | ||||||||||| |||||||||||    
T  50616528 agcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaataaatatcagtttgcttttgt 50616456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 50624455 - 50624283
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    |||||||  |||||||||  ||||||||||  |||||| | ||| |||||| | | || | |||||| | |||| |  |||||||||  |||| ||||||    
T  50624455 gtgatttaaattttatcatattatttgtagatattttgcctttgcatgctaatgacttggatgttgtgagtttgctcacagattcacgttttacgttttt 50624356  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||| |  |||||||||| ||| ||| | ||||||| ||||||||| | | ||||||||||| |||||||||||    
T  50624355 agcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaataaatatcagtttgcttttgt 50624283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 5983985 - 5984068
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttat 105  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| || | || ||| | |||||| ||| |||||| ||||||    
T  5983985 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgatgtgagtttgttcgcatattcaccctttat 5984068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 47133035 - 47133146
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  || ||||||||||||||| | || ||||||||||| || | |||||| | |||||| ||||||| |  |||||    
T  47133035 tattctggtgatttagatttcatcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagatttatccttta 47133134  T
Q  105 tgtttttagcga 116  Q
     |||||||||||    
T  47133135 cgtttttagcga 47133146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 4413263 - 4413357
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  ||||||||||||||||||   |||||||||||||||||   || ||| ||||||||  ||||||||  ||||| |||||||||||    
T  4413263 ttttatcatattatttgtaggcattttgctgttgtatgctattaaattgagtgctgtgaatttgttcacagattcatcctttacgtttttagcga 4413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 11462425 - 11462331
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  ||||||||||| |||||||| |||||||||||||| || | || ||| | |||||| | ||||||||  |||| |||||||||||    
T  11462425 ttttatcatattatttgtaggaattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccatttacgtttttagcga 11462331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 15431611 - 15431517
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||||  |||||||||| |||||| || |||||||||||| | || | |||||| | |||||| |||||||||  ||||| |||||||||    
T  15431611 gattttatcatattatttgtagacattttatcgttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagc 15431517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 21687527 - 21687621
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  ||||||||||||||||| || || ||||||||||| || | |||||| | |||||| ||||||||||  |||| |||| ||||||    
T  21687527 ttttatcatattatttgtaggcattttctcgttttatgctattaatttgggtgttgtgagtttgttagcagattcaccttttacgtttctagcga 21687621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 31984310 - 31984400
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||  |||||| || |||||||||| |||||||||||||| || | |||||| | |||||| ||||||| || ||||| |||||||    
T  31984310 ttttatcatattatttttaagcattttgtcgttgtatgctattaacttgggtgttgtgactttgttcgcagatttaccctttacgttttta 31984400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 34878221 - 34878127
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | || ||||||||||| || | |||||| | ||||||  |||||||||  |||| |||||||||||    
T  34878221 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcacagattcaccttttacgtttttagcga 34878127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 45415707 - 45415801
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | ||||||  |||||| || | |||||| | |||||| ||| |||||| ||||| |||||||||||    
T  45415707 ttttatcatattatttgtaggcattttgccgttgtataatattaatttgggtgttgtgagtttgttcgcatattcaccctttacgtttttagcga 45415801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 7836739 - 7836650
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||||  |||||||||||||||||| | || ||||||||||| || | || ||| | |||||| |||||||||  ||||||||||||    
T  7836739 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttatgttttt 7836650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 15836273 - 15836318
Alignment:
Q  139 gatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||| | ||||||||||| |||||||||||||||||||||||||    
T  15836273 gatgtaatctatcaatttgaatgaataaatatcattttgcttttgt 15836318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 16989520 - 16989611
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttag 113  Q
    ||||||||  |||||||||||||||||| | || ||||||||||| || | || ||| | |||||||||||||| ||  |||| ||||||||    
T  16989520 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgtttgcagatttaccatttacgtttttag 16989611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 25564207 - 25564294
Alignment:
Q  82 tttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaata 169  Q
    |||||| || |||| || |||||| |||||| | |  |||||||||| |||||||  |||||||||||||||||| | ||||||||||    
T  25564207 tttgttcgcggatttactctttatatttttaacaatgttgatcatgtcattgtatcagatgtattatatcaattttaatgaataaata 25564294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 27580073 - 27579978
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    ||||||||||  |||||  || |||||||| |||| ||||||||||| || | |||||| | |||||| |||||||||| ||||||  ||||||||    
T  27580073 gattttatcatattattcataagcattttgccattttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttatcattttagcg 27579978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 10776404 - 10776310
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||| |||||||||||||||||||   |||||| ||||||| || | || ||| | |||||| |||  ||||| ||||| |||||||||||    
T  10776404 ttttatcattttatttgtaggcattttgctgttgtattctattaacttgggtgctgtgagtttgttcgcaatttcaccctttacgtttttagcga 10776310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 14872788 - 14872870
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| ||| |||||| |||||    
T  14872788 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcacccttta 14872870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 31692313 - 31692247
Alignment:
Q  119 ttgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgtg 185  Q
    |||||||||| |||  || ||||||||| ||||||||||| | ||| ||||||||||| ||||||||    
T  31692313 ttgatcatgttattacatatgatgtattctatcaatttgaataaatgaatatcattttacttttgtg 31692247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 34529213 - 34529311
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttt 110  Q
    |||||||  |||||||||| ||||||||||||||||| |  |||||| ||||||| || | || ||| | |||||| |||||||||  ||||| |||||    
T  34529213 gtgatttaaattttatcacattatttgtaggcatttttttgttgtatactattaacttgggtgatgtgagtttgttcgcagattcaatctttacgtttt 34529311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 40163298 - 40163224
Alignment:
Q  108 ttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgctttt 182  Q
    |||||||||  ||||| | || ||||||| | ||||||| ||||||||||| ||||| |||||| ||||||||||    
T  40163298 ttttagcgatgttgattaagttattgtatctcatgtattctatcaatttgaatgaatgaatatcgttttgctttt 40163224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 45789700 - 45789734
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaa 66  Q
    ||||||||||| |||||||||||||||||||||||    
T  45789700 ttatttgtaggaattttgtcattgtatgctattaa 45789734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 39888429 - 39888482
Alignment:
Q  131 ttgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||| ||||||||||||||||||||  ||||| |||||| ||||| ||||||    
T  39888429 ttgtatctgatgtattatatcaatttgtatgaatgaatatcgttttgtttttgt 39888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 9687115 - 9687035
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | || ||| | |||||| |||||||||  ||||| ||||||||||    
T  9687115 tttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacgtttttagcg 9687035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 31317875 - 31317975
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| || |||||||  ||||||||||||||||| || ||| || ||||||| || | || ||| | |||||| ||| |||||| ||||| ||||||    
T  31317875 gtgatttagaatttatcatattatttgtaggcattttatcgttgcatcctattaacttgggtgatgtgagtttgttcgcaaattcaccctttacgttttt 31317974  T
Q  112 a 112  Q
    |    
T  31317975 a 31317975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 36894253 - 36894197
Alignment:
Q  131 ttgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgtgaa 187  Q
    |||||||||||||| | |||| |||||| ||||| |||||| ||||| |||||||||    
T  36894253 ttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtgaa 36894197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 41994559 - 41994607
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcat 53  Q
    |||||| ||||||| |||||||||| |||||||||||  ||||||||||    
T  41994559 tattctggtgatttagattttatcattttatttgtagcaattttgtcat 41994607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 51872034 - 51872114
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| |||| || ||||||||||| || | || ||| | |||||| |||||||||  ||||| ||||||||||    
T  51872034 tttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagcg 51872114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 1638 - 1460
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||||||||  ||||||||||||||||| || || ||||||||||| |||| || ||| | |||||| |||||||||| || ||    
T  1638 tattctggtgatttagattttatcatattatttgtaggcattttatcgttatatgctattaattttgatgatgtgagtttgttcgcagattcaccctata 1539  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
     ||||| || || ||||||||||| ||||| | ||||||||| ||||||||||| ||||| ||||||  |||||||||||    
T  1538 cgttttaagggatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc-ctttgcttttgt 1460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 6e-30; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 35133078 - 35133244
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||||||||||| ||||| ||||  |||||| ||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||| || ||    
T  35133078 tattctagtgatttagatttcatcatattatttctaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcaccctata 35133177  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
     ||||||| ||| ||||||||||| ||||| | ||||||||| ||||||||||| ||||| ||||||    
T  35133178 cgtttttaacgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 35133244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 48930838 - 48931004
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||| ||||||||| | |||||||||||||| || | | |||| | |||||| |||||||||  || ||    
T  48930838 tattctggtgatttagatttcatcatattatttgttggcattttgccgttgtatgctattaacttgggtattgtgagtttgttcgcagattcaacctata 48930937  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatc 171  Q
     ||||||||||| ||||||||||| ||||| | ||||||||| ||||||||| | ||||| ||||||    
T  48930938 cgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttaaatgaatgaatatc 48931004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 11343967 - 11344119
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgat 131  Q
    ||||||||||| ||||||   |||||||||||||| || | |||  ||| ||||| ||||||||||   |||| |||||||||||  |||||||||| ||    
T  11343967 ttatttgtaggtattttgatgttgtatgctattaacttaggtgtcttaagtttgtatgcagattcatcatttacgtttttagcgatgttgatcatgttat 11344066  T
Q  132 tgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||| ||||||||||||||||||||| | ||| |||||| ||||| ||||||    
T  11344067 tgtatctgatgtattatatcaatttgaataaatgaatatcgttttgtttttgt 11344119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 25255387 - 25255497
Alignment:
Q  34 atttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattg 133  Q
    |||||||||||||||||| |||||||||||||| || | |||||| | |||||| |||||| ||| ||||| ||||||||||| ||||| ||||| |||     
T  25255387 atttgtaggcattttgtcgttgtatgctattaacttagatgttgtgagtttgttcgcagatacaccctttacgtttttagcgatattgaacatgttatta 25255486  T
Q  134 tatttgatgta 144  Q
    |||||||||||    
T  25255487 tatttgatgta 25255497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 46822692 - 46822544
Alignment:
Q  15 attttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    |||| ||||||||||  |||||||||| |||||||||||||||||||||||| || | |||||| | |||||| ||| ||||||  |||| |||| ||||    
T  46822692 atttagattttatcatattatttgtag-cattttgtcattgtatgctattaacttggatgttgtgagtttgttcgcatattcactttttacgtttgtagc 46822594  T
Q  115 gacattgatcatgtgattgtatttgatgtattatatcaatttgattgaat 164  Q
    ||  |||||||||| ||||||| | ||| ||| ||||||||||| |||||    
T  46822593 gatgttgatcatgttattgtatctaatgcattctatcaatttgaatgaat 46822544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 34899550 - 34899407
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcgacattg 121  Q
    ||||||||  ||||||||| |||||||| | |||||||||||||| || | |||||| | |||||| |||||||||| ||||| |||||||||||         
T  34899550 ttttatcatattatttgtatgcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacgtttttagcga----- 34899456  T
Q  122 atcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
          || |||||||||||||| | ||||||||||| |||||||||||||||||    
T  34899455 ------tgtttgtatttgatgtactctatcaatttgaatgaataaatatcatttt 34899407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 40993305 - 40993399
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||||| ||||||| |||||| || | |||||| | |||||| |||||||||| ||||| |||||||||||    
T  40993305 ttttatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga 40993399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 48316755 - 48316661
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| || | || ||| | |||||| |||||||||| ||||| |||||||||||    
T  48316755 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttaggtttttagcga 48316661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 25068267 - 25068367
Alignment:
Q  84 tgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttg 183  Q
    |||||||||||||||  |||| ||||||||||| |||||| |||| ||||| | ||||||||| |||||||||||  |||| |||||| | |||||||||    
T  25068267 tgtttgcagattcaccatttacgtttttagcgatattgatgatgttattgtttctgatgtattctatcaatttgaaagaatgaatatcgtattgcttttg 25068366  T
Q  184 t 184  Q
    |    
T  25068367 t 25068367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 22743075 - 22743198
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  |||||||| ||||||||| | |||||||||||||| || | |||||  | ||| || |||||||||| || ||    
T  22743075 tattctggtgatttagatttcatcatattatttgttggcattttgccgttgtatgctattaatttgggtgttgggagttttttcgcagattcaccctata 22743174  T
Q  105 tgtttttagcgacattgatcatgt 128  Q
     ||||||||||| |||||||||||    
T  22743175 cgtttttagcgatattgatcatgt 22743198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 39171533 - 39171439
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || | | | ||||||||||||||||| ||||| |||||||||||    
T  39171533 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctatgagtttgtttgcagattcaccctttacgtttttagcga 39171439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 9450097 - 9449996
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||| ||||||||| | ||||||||  |||||||||||||||||| | |||||||||||||| || | |||||| | |||||| ||| |||||| |||||    
T  9450097 tattttagtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaatttaggtgttgtgagtttgttcgcatattcacccttta 9449998  T
Q  105 tg 106  Q
    ||    
T  9449997 tg 9449996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 48061560 - 48061661
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||| | |||||||||||||| || | |||| | | |||||| |||||||||| ||||| ||||||    
T  48061560 gtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttatgagtttgttcgcagattcaccctttacgttttt 48061659  T
Q  112 ag 113  Q
    ||    
T  48061660 ag 48061661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 28476364 - 28476516
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| ||||||||||  |||||||||||||||||| | |   ||| |||||| ||   || ||| | |||||||||||||||||  |||| ||||||    
T  28476364 gtgatttagattttatcatattatttgtaggcattttgccgtgcaatgttattaacttgagtgctgtgagtttgtttgcagattcaccatttacgttttt 28476463  T
Q  112 agcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaat 164  Q
    ||| | ||||||||||| ||| | | ||||||||| ||||||| ||| |||||    
T  28476464 agcaatattgatcatgttattatctctgatgtattctatcaatatgaatgaat 28476516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 45349752 - 45349648
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||| | || ||||||||||| || | |||||| | |||||| |||| ||||| ||||| ||||||    
T  45349752 gtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcaggttcaccctttacgttttt 45349653  T
Q  112 agcga 116  Q
    |||||    
T  45349652 agcga 45349648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 3876116 - 3876033
Alignment:
Q  101 tttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||| |||||||  || ||||||||||| ||||||||||||||||| |||||||||||  |||  |||||||||||| ||||||    
T  3876116 tttacgtttttaatgatattgatcatgttattgtatttgatgtattctatcaatttgaacgaaagaatatcattttgtttttgt 3876033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 8001489 - 8001395
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||| ||||||||||| | |||||||||||||| || | || ||| | |||||| |||||||||| ||||| |||||||||||    
T  8001489 ttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcga 8001395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 9977155 - 9977061
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||||  |||||| ||| ||||||||| |||||||||||||| || | |||||| ||||| ||  ||||||||| ||||| |||||||||    
T  9977155 gattttatcatattatttttagacattttgtcgttgtatgctattaacttggatgttgtgaattttttcacagattcaccctttacgtttttagc 9977061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 11654044 - 11654110
Alignment:
Q  118 attgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    |||||| |||| ||||||||||||||||| ||||||||||| ||||| |||||  ||||||||||||    
T  11654044 attgatgatgttattgtatttgatgtattctatcaatttgaatgaatgaatattgttttgcttttgt 11654110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 28407861 - 28407767
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||| ||||||| | |||||||||||||| || | || ||| | |||||| ||||||| || |||||||||||||||||    
T  28407861 ttttatcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagatttaccctttatgtttttagcga 28407767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 31482041 - 31481887
Alignment:
Q  23 tttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgca-gattcacactttatgtttttagcgacattg 121  Q
    |||||||  |||||| || | |||||| | |||||||||||||| || | |||||||  |||||| ||| ||||||  ||||| | ||||| | |  |||    
T  31482041 tttatcatgttatttataagtattttgccgttgtatgctattaacttgggtgttgtatgtttgttcgcaagattcattctttacgcttttaacaatgttg 31481942  T
Q  122 atcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    ||||||| ||||||| ||||||||| ||||||||||| ||||| |||||| ||||    
T  31481941 atcatgttattgtatatgatgtattctatcaatttgaatgaatgaatatcgtttt 31481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 42978758 - 42978852
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||| ||||||||||||| | |||||||||||||| || | |||||| | || ||| |||||||||| ||||| |||||||||||    
T  42978758 ttttatcatattatatgtaggcattttgccgttgtatgctattaacttgggtgttgtgagttcgttcgcagattcaccctttacgtttttagcga 42978852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 47590459 - 47590553
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | ||||| |||||||| || | |||||| | |||||||||||||| || ||||| ||||| |||||    
T  47590459 ttttatcatattatttgtaggcattttgccgttgtaagctattaacttgggtgttgtgagtttgtttgcagatttaccctttacgttttcagcga 47590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 24069353 - 24069288
Alignment:
Q  6 attctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttg 71  Q
    ||||| ||||||| ||||||||||  ||||||||||||||||| || |||||||||||||| ||||    
T  24069353 attctggtgatttagattttatcatattatttgtaggcattttatcgttgtatgctattaactttg 24069288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 4999894 - 4999810
Alignment:
Q  100 ctttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||||||||| |||  ||||| |||| ||||||| |||| |||||||| ||||||| ||||| |||||| ||||| ||||||    
T  4999894 ctttatgtttttatcgatgttgatgatgttattgtatctgatatattatattaatttgaatgaatgaatatcgttttgtttttgt 4999810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 12141253 - 12141156
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatt-tgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||||  ||||||||| |||||||| | |||||||||||||| ||  |||||||| | |||||| ||| ||||||  |||| |||||||||||    
T  12141253 gattttatcatattatttgtatgcattttgccgttgtatgctattaacttgggttgttgtgagtttgttcgcatattcaccttttacgtttttagcga 12141156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 13796872 - 13796807
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtt 87  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| || | |||||| | ||||||    
T  13796872 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttggatgttgtgagtttgtt 13796807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 35665095 - 35665034
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||| ||||||||| ||||||||||  |||||| | ||||||||||| ||||||||||||||    
T  35665095 tattttagtgatttagattttatcatattattttttggcattttgtcgttgtatgctattaa 35665034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 46244196 - 46244151
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaa 66  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||    
T  46244196 attttatcatattatttgtaggcattttgtcattgtatgttattaa 46244151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 1485166 - 1485086
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    |||||||||||| || | || ||||||||||| || | ||||||||| ||||| |||||||||  ||||| ||||||||||    
T  1485166 tttgtaggcattatgcccttatatgctattaacttggatgttgtaaacttgttcgcagattcatcctttacgtttttagcg 1485086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 19297018 - 19297106
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttt 110  Q
    ||||||||  ||||||||||||||||||   || ||||||||||| || | |||||| | |||||| |||||||||| ||||| |||||    
T  19297018 ttttatcatattatttgtaggcattttgctgttatatgctattaatttgggtgttgtgagtttgttcgcagattcaccctttaagtttt 19297106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 28044709 - 28044605
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||| ||| ||||||| | |||||||||||||| || | |||| | | |||||| | |||||||| ||||| ||||||    
T  28044709 gtgatttaggttttatcatattatttttagacattttgccgttgtatgctattaacttggatgttatgagtttgttcgtagattcaccctttacgttttt 28044610  T
Q  112 agcga 116  Q
    |||||    
T  28044609 agcga 28044605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 46700181 - 46700272
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttta 112  Q
    ||||||||||  |||||| ||||||||||| | || ||||||||||| |  | |||||| | |||| |||||||||||| |||||||||||||    
T  46700181 gattttatcatattatttataggcattttgccgttatatgctattaactagggtgttgtgagtttg-ttgcagattcaccctttatgttttta 46700272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 29617644 - 29617550
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcg 115  Q
    ||||||||||  |||||||||| ||||||||  |||  ||||||||| || || ||||| | |||||||||||||||||  |||| ||||||||||    
T  29617644 gattttatcatattatttgtagacattttgttgttgagtgctattaacttggt-gttgtgagtttgtttgcagattcaccatttacgtttttagcg 29617550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 30756762 - 30756671
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttag 113  Q
    ||||||||  |||||| ||||||||||||| || |||||| |||| || | |||||||| || ||| |||||||||  ||||| ||||||||    
T  30756762 ttttatcatattatttataggcattttgtcgttttatgctgttaacttaggtgttgtaagttagttcgcagattcagcctttacgtttttag 30756671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 3222943 - 3222897
Alignment:
Q  138 tgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||||||||||||||| | ||||| |||||||||||| ||||||    
T  3222943 tgatgtattatatcaatttaaatgaatgaatatcattttgtttttgt 3222897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 14046574 - 14046504
Alignment:
Q  106 gtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    ||||||||| || |||||||||| |||| || ||||  ||| ||||||||||| |||| ||||||||||||    
T  14046574 gtttttagcaacgttgatcatgttattgcatatgatacattttatcaatttgaatgaagaaatatcatttt 14046504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 14356604 - 14356534
Alignment:
Q  106 gtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    ||||||||| || |||||||||| |||| || ||||  ||| ||||||||||| |||| ||||||||||||    
T  14356604 gtttttagcaacgttgatcatgttattgcatatgatacattttatcaatttgaatgaagaaatatcatttt 14356534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 20083594 - 20083640
Alignment:
Q  138 tgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||||| |||||| |||||| |||||||||||||||||| ||||||    
T  20083594 tgatgtactatatcgatttgaatgaataaatatcattttgtttttgt 20083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 24610097 - 24610059
Alignment:
Q  138 tgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  24610097 tgatgtattatatcaatttgaatgaatgaatatcatttt 24610059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 35261464 - 35261542
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttag 113  Q
    |||||||||||| || | |||||||||||||| || | | |||| | |||||| |||||||||  ||||||||||||||    
T  35261464 tttgtaggcattatgccgttgtatgctattaacttggatattgtgagtttgttcgcagattcatcctttatgtttttag 35261542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 37837401 - 37837307
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  ||| |||||||||||||| | || ||||||||||| || | || ||| | |||||| ||| |||||| ||||| |||||||||||    
T  37837401 ttttatcatattacttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcga 37837307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 38798927 - 38799005
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcac 98  Q
    ||||||||||  |||||||||||||||||| | |  ||||||||||| || | |||||| | |||||| ||||||||||    
T  38798927 gattttatcatattatttgtaggcattttgccgtcttatgctattaacttggatgttgtgagtttgttcgcagattcac 38799005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 49148075 - 49148009
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttg 71  Q
    ||||| ||||| || ||||||||||  ||| |||| ||||||||||| |||||||||||||| ||||    
T  49148075 tattccagtgacttggattttatcatattaattgttggcattttgtcgttgtatgctattaactttg 49148009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 969352 - 969284
Alignment:
Q  82 tttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaa 153  Q
    |||||||||| ||| ||  ||||||||||||| ||| |||||||||| |||||||   ||||||||||||||    
T  969352 tttgtttgcatatttaccttttatgtttttagtgacgttgatcatgttattgtat---atgtattatatcaa 969284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 27341708 - 27341769
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcaga 93  Q
    |||||||||||||||||| | || ||||||||||| |||| |||| ||| |||||| |||||    
T  27341708 ttatttgtaggcattttgccgttatatgctattaactttgatgttataagtttgttagcaga 27341769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 17499591 - 17499539
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtt 87  Q
    |||||||||||  |||| || ||||||||||| ||||||||||| ||||||||    
T  17499591 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgtt 17499539  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 17553623 - 17553675
Alignment:
Q  35 tttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtt 87  Q
    |||||||||||  |||| || ||||||||||| ||||||||||| ||||||||    
T  17553623 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgtt 17553675  T

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Target: scaffold0445 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 1480 - 1584
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  |||||||||||||||||| | || ||||||||||| || | |||||| | ||||||||||||||||| ||||| ||||||    
T  1480 gtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttggatgttgtgagtttgtttgcagattcaccctttacgttttt 1579  T
Q  112 agcga 116  Q
    |||||    
T  1580 agcga 1584  T

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Target: scaffold0021 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 4370 - 4454
Alignment:
Q  100 ctttatgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcattttgcttttgt 184  Q
    ||||| ||||||||||| |||||| |||| ||||||| ||||||||| ||||||||||| ||||| ||||| |||||||||||||    
T  4370 ctttacgtttttagcgatattgatgatgttattgtatctgatgtattttatcaatttgaatgaatgaatattattttgcttttgt 4454  T

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Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 4309 - 4361
Alignment:
Q  13 tgattttgattttatcactttatttgtaggcattttgtcattgtatgctatta 65  Q
    |||||| ||||||||||  |||||||||| ||||||||||||| |||||||||    
T  4309 tgatttagattttatcatattatttgtagacattttgtcattggatgctatta 4361  T

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Target: scaffold0039 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 93236 - 93406
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| |||||||  |||||||||  || ||||||||||||||||  |||| ||||||||| || | || | | || |||||  |||||||||  ||||    
T  93236 tattctggtgatttaaattttatcatattgtttgtaggcattttgttgttgtgtgctattaacttgggtgctatgaacttgttcacagattcaccattta 93335  T
Q  105 tgtttttagcgacattgatcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
     ||||| |||||  || ||||||| ||| ||| ||||||||| ||||||||||| ||||| |||||||||||    
T  93336 cgtttt-agcgatgtttatcatgttattttatctgatgtattttatcaatttgaatgaatgaatatcatttt 93406  T

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Target: scaffold0127 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 15638 - 15732
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | || ||||||||||| || | || ||| | |||||| |||||||||| |||||||||||||||||    
T  15638 ttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgctgtgagtttgttcgcagattcactctttatgtttttagcga 15732  T

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Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 71233 - 71149
Alignment:
Q  32 ttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    |||||||||||||||||||  |||||||||||||| || | |||||||| |||||||| ||||| |  ||||| |||||||||||    
T  71233 ttatttgtaggcattttgttgttgtatgctattaacttgggtgttgtaagtttgtttgtagattaatcctttacgtttttagcga 71149  T

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Target: scaffold0603 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 7862 - 8016
Alignment:
Q  23 tttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactt-tatgtttttagcgacattg 121  Q
    |||||||  ||||||||||| ||||||  |||||||| |||||| || | |||||| | |||||| ||| |||||| ||| || ||||||||| |  ||     
T  7862 tttatcatattatttgtagggattttgctattgtatgttattaacttgggtgttgtgagtttgttcgcatattcacccttgtacgtttttagcaatgtta 7961  T
Q  122 atcatgtgattgtatttgatgtattatatcaatttgattgaataaatatcatttt 176  Q
    | || || ||||||||||||||| | ||||||||||| ||||| |||||| ||||    
T  7962 aacaagttattgtatttgatgtactctatcaatttgaatgaatgaatatcgtttt 8016  T

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Target: scaffold0088 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 50922 - 51004
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| || | || ||| | |||||| |||||||||| |||||    
T  50922 ttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccttta 51004  T

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Target: scaffold0884 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 1926 - 1822
Alignment:
Q  12 gtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgttttt 111  Q
    ||||||| | ||||||||  ||||||||||||||||||   ||||||| |||||| || | |||| | | |||||| |||||||||| ||||| ||||||    
T  1926 gtgatttaggttttatcatattatttgtaggcattttgctgttgtatgttattaacttgggtgttatgagtttgttcgcagattcaccctttacgttttt 1827  T
Q  112 agcga 116  Q
    |||||    
T  1826 agcga 1822  T

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Target: scaffold0050 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 65985 - 65903
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| ||   |||| | | |||||| |||||||||| |||||    
T  65985 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgagtgttatgagtttgttcgcagattcacccttta 65903  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 71813 - 71719
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||| | |||||||||||||| || | || ||| | |||||| | |||||||| ||||| |||| ||||||    
T  71813 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacgtttctagcga 71719  T

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Target: scaffold0017 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 32692 - 32598
Alignment:
Q  20 gattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagc 114  Q
    ||||||||||  ||||||||||||||||||||  ||||| ||||||| ||   |||||| | ||||||  ||||||||| ||||| |||||||||    
T  32692 gattttatcatattatttgtaggcattttgtcgctgtatactattaacttgagtgttgtgagtttgttcccagattcaccctttacgtttttagc 32598  T

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Target: scaffold0347 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 6159 - 6252
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcac 98  Q
    |||||| ||||||| ||||||||||  |||||||||| ||||||||  ||  | |||||||| || | |||||| | |||||||||||||||||    
T  6159 tattctggtgatttagattttatcatattatttgtagacattttgttgttacaagctattaacttggatgttgtgagtttgtttgcagattcac 6252  T

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Target: scaffold0136 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 34706 - 34630
Alignment:
Q  21 attttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattca 97  Q
    |||||||||  |||||||||||||||||||  ||||||||  |||| || | |||||||| |||||| |||||||||    
T  34706 attttatcatattatttgtaggcattttgttgttgtatgcctttaacttagatgttgtaagtttgttcgcagattca 34630  T

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Target: scaffold0136; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 9985 - 9891
Alignment:
Q  22 ttttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacactttatgtttttagcga 116  Q
    ||||||||  |||||||||||||||||  | || ||||||||| | || | || ||| | |||||| |||||||||| ||||| |||||||||||    
T  9985 ttttatcatattatttgtaggcatttttccgttttatgctattgacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcga 9891  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 58048 - 57937
Alignment:
Q  5 tattctagtgattttgattttatcactttatttgtaggcattttgtcattgtatgctattaaatttgttgttgtaaatttgtttgcagattcacacttta 104  Q
    |||||| ||||||| ||||| ||||  || ||||||||||||||| | || ||||||||||| || | || ||| | |||||| ||||||| |  |||||    
T  58048 tattctggtgatttagatttcatcatattttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatccttta 57949  T
Q  105 tgtttttagcga 116  Q
     |||||||||||    
T  57948 cgtttttagcga 57937  T

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