View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11427_low_5 (Length: 634)

Name: NF11427_low_5
Description: NF11427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11427_low_5
NF11427_low_5
[»] chr1 (18 HSPs)
chr1 (242-566)||(50860124-50860470)
chr1 (133-193)||(50860467-50860527)
chr1 (45-100)||(26854205-26854260)
chr1 (45-100)||(52271130-52271185)
chr1 (515-566)||(29836245-29836296)
chr1 (45-100)||(11769879-11769934)
chr1 (45-100)||(25494374-25494429)
chr1 (42-96)||(31313723-31313777)
chr1 (45-100)||(25727794-25727849)
chr1 (45-100)||(25736202-25736257)
chr1 (515-566)||(40981609-40981660)
chr1 (54-100)||(25665655-25665701)
chr1 (45-100)||(9328342-9328396)
chr1 (45-92)||(15416866-15416913)
chr1 (45-96)||(27461070-27461121)
chr1 (515-566)||(50290439-50290490)
chr1 (42-100)||(30675656-30675713)
chr1 (45-100)||(19257691-19257744)
[»] chr8 (13 HSPs)
chr8 (23-110)||(13583395-13583483)
chr8 (45-100)||(28901235-28901289)
chr8 (39-97)||(28291989-28292047)
chr8 (512-566)||(38681143-38681197)
chr8 (39-105)||(31436641-31436704)
chr8 (45-96)||(6888082-6888133)
chr8 (45-100)||(11437594-11437649)
chr8 (45-100)||(32239462-32239517)
chr8 (520-566)||(26955418-26955464)
chr8 (39-100)||(30543929-30543991)
chr8 (45-105)||(29291944-29292004)
chr8 (512-563)||(38682400-38682450)
chr8 (45-97)||(16052165-16052217)
[»] scaffold0190 (1 HSPs)
scaffold0190 (23-100)||(11583-11661)
[»] chr4 (26 HSPs)
chr4 (39-99)||(17187341-17187401)
chr4 (45-100)||(31859786-31859841)
chr4 (52-100)||(13064607-13064655)
chr4 (45-86)||(26159930-26159971)
chr4 (39-96)||(33519198-33519255)
chr4 (514-566)||(37618987-37619038)
chr4 (45-100)||(12111213-12111267)
chr4 (515-566)||(14210434-14210485)
chr4 (515-566)||(14211403-14211454)
chr4 (515-566)||(14212354-14212405)
chr4 (515-566)||(14213323-14213374)
chr4 (515-566)||(14214291-14214342)
chr4 (515-566)||(14215260-14215311)
chr4 (515-566)||(14218131-14218182)
chr4 (515-566)||(14219101-14219152)
chr4 (515-566)||(14220070-14220121)
chr4 (515-566)||(14221021-14221072)
chr4 (515-566)||(14221990-14222041)
chr4 (515-566)||(14222959-14223010)
chr4 (42-99)||(5906649-5906706)
chr4 (515-575)||(14216229-14216287)
chr4 (45-102)||(19601973-19602029)
chr4 (47-100)||(47024651-47024703)
chr4 (45-73)||(29437645-29437673)
chr4 (183-227)||(32650737-32650781)
chr4 (45-97)||(34864184-34864235)
[»] chr7 (17 HSPs)
chr7 (45-100)||(30405768-30405823)
chr7 (45-100)||(21545712-21545767)
chr7 (45-100)||(23125075-23125130)
chr7 (45-100)||(29544694-29544749)
chr7 (512-565)||(11503211-11503264)
chr7 (45-93)||(12358655-12358703)
chr7 (514-566)||(24759480-24759532)
chr7 (48-97)||(20470698-20470747)
chr7 (519-566)||(1971098-1971145)
chr7 (45-100)||(7494871-7494925)
chr7 (45-100)||(9801760-9801814)
chr7 (45-100)||(20017128-20017182)
chr7 (45-100)||(24596889-24596944)
chr7 (377-414)||(7850668-7850705)
chr7 (53-117)||(20446384-20446446)
chr7 (61-97)||(8308924-8308960)
chr7 (48-96)||(10253629-10253677)
[»] chr6 (7 HSPs)
chr6 (45-100)||(33638260-33638315)
chr6 (45-100)||(33638390-33638445)
chr6 (45-99)||(26499733-26499787)
chr6 (512-566)||(2319910-2319962)
chr6 (515-566)||(8840656-8840707)
chr6 (45-100)||(30355491-30355546)
chr6 (512-566)||(23073449-23073503)
[»] chr3 (13 HSPs)
chr3 (45-100)||(19219096-19219151)
chr3 (515-566)||(29129136-29129187)
chr3 (483-566)||(49826438-49826519)
chr3 (41-100)||(19543009-19543068)
chr3 (50-100)||(18474349-18474399)
chr3 (39-100)||(28422621-28422681)
chr3 (515-575)||(53689237-53689298)
chr3 (50-100)||(10341966-10342016)
chr3 (45-110)||(11475021-11475086)
chr3 (514-566)||(52126891-52126943)
chr3 (42-97)||(23908159-23908214)
chr3 (515-568)||(14459263-14459316)
chr3 (45-93)||(21829025-21829073)
[»] chr2 (13 HSPs)
chr2 (45-100)||(14921924-14921979)
chr2 (23-99)||(19541188-19541264)
chr2 (520-566)||(26449099-26449145)
chr2 (44-96)||(18236192-18236244)
chr2 (42-97)||(1732722-1732777)
chr2 (45-100)||(18818876-18818931)
chr2 (61-100)||(22525705-22525744)
chr2 (493-528)||(33853641-33853676)
chr2 (53-102)||(30998953-30999002)
chr2 (515-575)||(31409719-31409777)
chr2 (514-566)||(4768484-4768536)
chr2 (23-94)||(22511097-22511169)
chr2 (45-93)||(31262171-31262219)
[»] chr5 (18 HSPs)
chr5 (45-100)||(7742755-7742810)
chr5 (45-100)||(23157689-23157744)
chr5 (520-566)||(40946716-40946762)
chr5 (514-574)||(40162216-40162277)
chr5 (45-96)||(11274219-11274270)
chr5 (520-574)||(16352150-16352205)
chr5 (45-100)||(18452697-18452752)
chr5 (45-100)||(30072290-30072345)
chr5 (50-115)||(20694819-20694884)
chr5 (48-100)||(19763771-19763823)
chr5 (45-100)||(17027702-17027756)
chr5 (45-92)||(26070648-26070695)
chr5 (45-100)||(26329955-26330009)
chr5 (520-566)||(4077844-4077890)
chr5 (45-95)||(20083641-20083691)
chr5 (48-85)||(24410830-24410867)
chr5 (45-97)||(16622565-16622616)
chr5 (44-96)||(16634220-16634272)
[»] scaffold0171 (1 HSPs)
scaffold0171 (45-99)||(21572-21626)
[»] scaffold0188 (1 HSPs)
scaffold0188 (45-100)||(26840-26895)
[»] scaffold0011 (1 HSPs)
scaffold0011 (62-100)||(228072-228110)
[»] scaffold0650 (1 HSPs)
scaffold0650 (45-100)||(5655-5709)
[»] scaffold1149 (1 HSPs)
scaffold1149 (62-99)||(1978-2015)
[»] scaffold0185 (1 HSPs)
scaffold0185 (55-100)||(2684-2729)
[»] scaffold0036 (1 HSPs)
scaffold0036 (514-566)||(97743-97795)


Alignment Details
Target: chr1 (Bit Score: 170; Significance: 6e-91; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 242 - 566
Target Start/End: Complemental strand, 50860470 - 50860124
Alignment:
Q  242 tgaacccaacagttaacacatcgatcgtaggaagaagaagttgcaatggcttctttctctttcggtggagatgctggtcgcagtgagagagaga--aggg 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||  ||||    
T  50860470 tgaacccaacagttaacacatcgatcgtaggaagaagaagttgcaatggcttctttctgtttcgctggagatgttggtcgcagtgagagagagagaaggg 50860371  T
Q  340 gagaggnnnnnnnnnnggtgtcaaatgttttggtctttgtattgagcggtgtgtacttgtcattggaaactgatttttt-ctttgccaaaacaaagtacg 438  Q
    ||||||          | |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||| ||||    
T  50860370 gagaggaaaaaaaaaag-tgtcaaatgttttggtctctgtattgagcggtgtgtacttgtcattagaaactgatttttttctttaacaaaacaaaatacg 50860272  T
Q  439 tatttttcaaagaacaaattttaaagaaggtttatcagtcgttg--------------------aacggttcaaatgttttggcgcccaaatgaattagg 518  Q
    |||||||||||||||||||||||||||||||||||||| |||||                    ||||| ||||||||||||||||||||||||||||||    
T  50860271 tatttttcaaagaacaaattttaaagaaggtttatcagccgttgatttcaattgacattgaatcaacggatcaaatgttttggcgcccaaatgaattagg 50860172  T
Q  519 tttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||| ||||||||||||||||||| || ||||| ||||||||||||||    
T  50860171 tttaaggtttagcaattagggtaagcacgtttgctaggattagatata 50860124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 50860527 - 50860467
Alignment:
Q  133 aaaaagaaatttgagtgataccatgtagcgtgcgttcttgatgatattggaaatcaatgaa 193  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50860527 aaaatgaaatttgagtgataccatgtagcgtgcgttcttgatgatattggaaatcaatgaa 50860467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 26854260 - 26854205
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  26854260 atatgaagattgaagttcaatggttcttagaagatatttgaagacaatacaaagtg 26854205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 52271185 - 52271130
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  52271185 atatgaagattgaagttcaatggtacttagaaggtatttgaagacaatacaaagtg 52271130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Complemental strand, 29836296 - 29836245
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  29836296 taggtttagggtttggcaattagggtaaacatgtttgctaggattagatata 29836245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 11769934 - 11769879
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||||  |||||||||||| ||||| ||||||||||||||||||||    
T  11769934 atatgaagattgaagaccaatggttcttagaaggtttttgaagacaatacaaagtg 11769879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 25494429 - 25494374
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||||  |||||||||||| ||||| ||||||||||||||||||||    
T  25494429 atatgaagattgaagaccaatggttcttagaaggtttttgaagacaatacaaagtg 25494374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 31313723 - 31313777
Alignment:
Q  42 agaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaa 96  Q
    |||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||    
T  31313723 agaatatgaagaatgaagatcaatgattcttataaggtttttgaagacaatacaa 31313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 25727849 - 25727794
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||| |||||||    
T  25727849 atatgaagattgaagatcaatggttcttggaaggtttttgaagacaatccaaagtg 25727794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 25736257 - 25736202
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||| |||||||    
T  25736257 atatgaagattgaagatcaatggttcttggaaggtttttgaagacaatccaaagtg 25736202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 40981609 - 40981660
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||||||||||| | ||||||||||| |||||||| ||||||||||||||    
T  40981609 taggtttagggtttggaaattagggtaagcatgtttgctaggattagatata 40981660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 25665701 - 25665655
Alignment:
Q  54 ttgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||    
T  25665701 ttgaagttcaatggttcttataaaatatttaaagacaatacaaagtg 25665655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 9328342 - 9328396
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||||||||| |||||    
T  9328342 atatgaagattgaa-ttcaatcgttcttagaaggtttttgaagacaatactaagtg 9328396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 15416913 - 15416866
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaat 92  Q
    ||||||||| ||||| ||||||||||||||||||| ||| ||||||||    
T  15416913 atatgaagaatgaagatcaatggttcttataaggtttttaaagacaat 15416866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 27461121 - 27461070
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaa 96  Q
    ||||||||  ||||| ||||||||||||| ||||| ||||||||||||||||    
T  27461121 atatgaagtatgaagatcaatggttcttaaaaggtttttgaagacaatacaa 27461070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Complemental strand, 50290490 - 50290439
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||||||||||| | | ||||| ||| |||||||||||||||||||||||    
T  50290490 taggtttagggtttggaatttaggttaagcatgtttgttaggattagatata 50290439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 30675656 - 30675713
Alignment:
Q  42 agaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||| ||||||||||| | |||||||||||| ||||| |||||||| |||||||||||    
T  30675656 agaatgtgaagattgaaat-caatggttcttagaaggtttttgaagataatacaaagtg 30675713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 19257744 - 19257691
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||  ||||  ||||||| ||||| ||||||||||||||||||||    
T  19257744 atatgaagattgaacatcaa--gttcttagaaggtctttgaagacaatacaaagtg 19257691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 13583483 - 13583395
Alignment:
Q  23 agacatcaagtggaggtt-gagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtggaaaagaaaa 110  Q
    |||||||||||| ||| | ||| |||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||||    
T  13583483 agacatcaagtgaaggatcgaggatatgatgattgaagttcaatggttcttagaagatatttgaagacaatacaaagtgaaaaaaaaaa 13583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 28901289 - 28901235
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  28901289 atatgaagattgaa-ttcaatggttcttataaggtttctgaagacaatacaaagtg 28901235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 28292047 - 28291989
Alignment:
Q  39 ttgagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaa 97  Q
    ||||| ||||||||||||||| | ||||||||||| ||||| |||||||||||||||||    
T  28292047 ttgaggatatgaagattgaagattaatggttcttagaaggtctttgaagacaatacaaa 28291989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 566
Target Start/End: Complemental strand, 38681197 - 38681143
Alignment:
Q  512 aattaggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||||| |||||||||||||| |||||||| |||||||| ||||||||||||||    
T  38681197 aattaggattagggtttagcaaatagggtaagcatgtttgctaggattagatata 38681143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 31436641 - 31436704
Alignment:
Q  39 ttgagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtggaaaa 105  Q
    ||||| ||||||||||||| | |||||||||||||   |||||||||||||||||||||||| ||||    
T  31436641 ttgaggatatgaagattgacgatcaatggttctta---ggtatttgaagacaatacaaagtgaaaaa 31436704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 6888133 - 6888082
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaa 96  Q
    ||||||||||||||| ||||||||||||| || || ||||||||||||||||    
T  6888133 atatgaagattgaagatcaatggttcttaaaatgtctttgaagacaatacaa 6888082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 11437594 - 11437649
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||| ||||||||||||||||||||| |||  |||||||||||||||| ||||    
T  11437594 atatgaaaattgaagttcaatggttcttagaagacatttgaagacaatacagagtg 11437649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 32239462 - 32239517
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||| ||||||    
T  32239462 atatgaagattgaagttcaatggtttttataaggttcttaaagacaataaaaagtg 32239517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 566
Target Start/End: Complemental strand, 26955464 - 26955418
Alignment:
Q  520 ttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  26955464 ttagggtttggcaattagggtaaacatgtttgctagaattagatata 26955418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 30543929 - 30543991
Alignment:
Q  39 ttgagaatatgaagattgaagttcaatggttc-ttataaggtatttgaagacaatacaaagtg 100  Q
    ||||| |||||||||||||||||||||||||| ||| ||| ||||| ||||||||| ||||||    
T  30543929 ttgaggatatgaagattgaagttcaatggttctttaaaagatatttaaagacaatataaagtg 30543991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 29291944 - 29292004
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtggaaaa 105  Q
    ||||||| ||||||| ||||||||||||| ||||| ||||||||||| | |||||| ||||    
T  29291944 atatgaatattgaagatcaatggttcttagaaggtctttgaagacaacagaaagtgaaaaa 29292004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 563
Target Start/End: Complemental strand, 38682450 - 38682400
Alignment:
Q  512 aattaggtttagggtttagcaattagggtaaacatgtttgttaggattagat 563  Q
    ||||||| ||||||||||||||| ||||||| |||||||| |||||||||||    
T  38682450 aattaggattagggtttagcaat-agggtaagcatgtttgctaggattagat 38682400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 16052217 - 16052165
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaa 97  Q
    ||||||||||| |||  ||||| |||||| ||||| |||||||||||||||||    
T  16052217 atatgaagattaaagaccaatgattcttagaaggtttttgaagacaatacaaa 16052165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 11661 - 11583
Alignment:
Q  23 agacatcaagtggagg-ttgagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  11661 agacatcaagttaaggattgagaatttgaagattgaatatcaatgattcttataaggtatttgaagacaatacaaagtg 11583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 3e-16; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 17187341 - 17187401
Alignment:
Q  39 ttgagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagt 99  Q
    ||||| ||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  17187341 ttgaggatatgaagattgaagttcagtggttcttagaagttatttgaagacaatacaaagt 17187401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 31859841 - 31859786
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  31859841 atatgaatattgaagatcaatggttcttagaaggtatttgaagacaatacaaagtg 31859786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 13064607 - 13064655
Alignment:
Q  52 gattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||    
T  13064607 gattgaagttcaatggttcttagagggtatttgaagacaattcaaagtg 13064655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 26159930 - 26159971
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaa 86  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  26159930 atatgaagattgaagatcaatggttcttataaggtctttgaa 26159971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 33519198 - 33519255
Alignment:
Q  39 ttgagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaa 96  Q
    ||||| |||||| |||||||| ||||| ||||||| ||||| ||||||||||||||||    
T  33519198 ttgaggatatgacgattgaagatcaatcgttcttagaaggtctttgaagacaatacaa 33519255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 566
Target Start/End: Original strand, 37618987 - 37619038
Alignment:
Q  514 ttaggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||||||||||| || ||||||||||| |||||||| ||||||||||||||    
T  37618987 ttaggtttagggtt-aggaattagggtaagcatgtttgctaggattagatata 37619038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 12111267 - 12111213
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||| |||||||| |||||||||||||||||| ||| |||| |||||||||||    
T  12111267 atatgaatattgaagt-caatggttcttataaggttttttaagataatacaaagtg 12111213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14210434 - 14210485
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14210434 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14210485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14211403 - 14211454
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14211403 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14211454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14212354 - 14212405
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14212354 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14212405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14213323 - 14213374
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14213323 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14213374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14214291 - 14214342
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14214291 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14214342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14215260 - 14215311
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14215260 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14215311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14218131 - 14218182
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14218131 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14218182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14219101 - 14219152
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14219101 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14219152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14220070 - 14220121
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14220070 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14220121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14221021 - 14221072
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14221021 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14221072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14221990 - 14222041
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14221990 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14222041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Original strand, 14222959 - 14223010
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14222959 taggttaagggtttggaaattagggtaagcatgtttgctaggattagatata 14223010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 5906706 - 5906649
Alignment:
Q  42 agaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagt 99  Q
    ||||||| |||||| ||| | ||||||||||| ||||| |||||||| ||||||||||    
T  5906706 agaatattaagatttaagattaatggttcttagaaggtttttgaagataatacaaagt 5906649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 575
Target Start/End: Original strand, 14216229 - 14216287
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatatataaaggatt 575  Q
    |||||| ||||||| | ||||||||||| |||||||| |||||||  ||||||||||||||    
T  14216229 taggttaagggtttggaaattagggtaagcatgtttgctaggatt--atatataaaggatt 14216287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 19601973 - 19602029
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtgga 102  Q
    |||||| ||||||||  |||||||||||| ||||| ||||||||||||| ||||||||    
T  19601973 atatgatgattgaaga-caatggttcttaaaaggtttttgaagacaataaaaagtgga 19602029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 47024703 - 47024651
Alignment:
Q  47 atgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||| |||||||||||| ||||| |||||| ||| |||||||||    
T  47024703 atgaagattgaagt-caatggttcttagaaggtttttgaaaacagtacaaagtg 47024651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 73
Target Start/End: Original strand, 29437645 - 29437673
Alignment:
Q  45 atatgaagattgaagttcaatggttctta 73  Q
    |||||||||||||||||||||||||||||    
T  29437645 atatgaagattgaagttcaatggttctta 29437673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 32650737 - 32650781
Alignment:
Q  183 aaatcaatgaaaggaaagagtagatgaattgagatgatgagatcg 227  Q
    |||| ||||||||||||||||| | ||||||||||| ||||||||    
T  32650737 aaataaatgaaaggaaagagtaaacgaattgagatgctgagatcg 32650781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 34864235 - 34864184
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaa 97  Q
    ||||| |||||||||| |||||||||||| ||||| |||| ||||||||||||    
T  34864235 atatggagattgaagt-caatggttcttagaaggtttttgtagacaatacaaa 34864184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 30405768 - 30405823
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  30405768 atatgaagattgaagttcaatgattcttagaaggtatttgaatacaatacaaagtg 30405823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 21545767 - 21545712
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||| ||||||||||||| || |||||||||||||||| ||||||    
T  21545767 atatgaagattgaagatcaatggttcttagaaagtatttgaagacaataaaaagtg 21545712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 23125075 - 23125130
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||    
T  23125075 atatgaagattgaagttcaatggttcttataagattcttaaagacaatacaaagtg 23125130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 29544694 - 29544749
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||| |||||| |||||| ||||| ||||||||||||||||||||    
T  29544694 atatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtg 29544749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 565
Target Start/End: Complemental strand, 11503264 - 11503211
Alignment:
Q  512 aattaggtttagggtttagcaattagggtaaacatgtttgttaggattagatat 565  Q
    ||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||    
T  11503264 aattaggtttagggtttcgcaattaggataaatatgtttggtaggattagatat 11503211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 12358703 - 12358655
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaata 93  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  12358703 atatgaagattgaagatcaatggttcttagaaggtttttgaagacaata 12358655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 514 - 566
Target Start/End: Complemental strand, 24759532 - 24759480
Alignment:
Q  514 ttaggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||| |||||||| || |||||||||||||||||||| ||||||||||||||    
T  24759532 ttaggattagggttaagaaattagggtaaacatgtttgctaggattagatata 24759480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 20470747 - 20470698
Alignment:
Q  48 tgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaa 97  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  20470747 tgaatattgaagttcaatggttcttagaaggttcttgaagacaatacaaa 20470698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 566
Target Start/End: Complemental strand, 1971145 - 1971098
Alignment:
Q  519 tttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||||||| | ||||||||||| |||||||| ||||||||||||||    
T  1971145 tttagggtttggaaattagggtaagcatgtttgctaggattagatata 1971098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 7494871 - 7494925
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||||| ||||||||||| |||||   ||||||||||||||||||    
T  7494871 atatgaagattgaagtt-aatggttcttagaaggtccatgaagacaatacaaagtg 7494925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 9801814 - 9801760
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||||| |||||||||||| ||||| ||| |||| |||||||||||    
T  9801814 atatgaagattgaagt-caatggttcttaaaaggtttttaaagaaaatacaaagtg 9801760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 20017128 - 20017182
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||| | |||||||||||| |||||  |||||||||||||||||||    
T  20017128 atatgaagattgaact-caatggttcttagaaggttcttgaagacaatacaaagtg 20017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 24596944 - 24596889
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||| |||||||||||||| |||||| || |||  |||||||||||||||||||||    
T  24596944 atataaagattgaagttcagtggttcatagaagaaatttgaagacaatacaaagtg 24596889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 7850668 - 7850705
Alignment:
Q  377 tgtattgagcggtgtgtacttgtcattggaaactgatt 414  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  7850668 tgtattgagtggtgtgtatttgtcattggaaactgatt 7850705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 20446384 - 20446446
Alignment:
Q  53 attgaagttcaatggttcttataaggtatttgaagacaatacaaagtggaaaagaaaatcatttt 117  Q
    ||||||| |||| |||||||| |||||  |||||||||||||||||||  ||| |||||||||||    
T  20446384 attgaagatcaagggttcttagaaggttgttgaagacaatacaaagtg--aaaaaaaatcatttt 20446446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 8308960 - 8308924
Alignment:
Q  61 tcaatggttcttataaggtatttgaagacaatacaaa 97  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  8308960 tcaatggttcttagaaggtctttgaagacaatacaaa 8308924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 10253677 - 10253629
Alignment:
Q  48 tgaagattgaagttcaatggttcttataaggtatttgaagacaatacaa 96  Q
    |||||||||||| |||||| | |||||| ||| ||||||||||||||||    
T  10253677 tgaagattgaagatcaatgatacttatagggtttttgaagacaatacaa 10253629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 33638260 - 33638315
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  33638260 atatgaagattgaagatcaatggttcttataaggtctttgaagataatacaaagtg 33638315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 33638445 - 33638390
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  33638445 atatgaagattgaagatcaatggttcttataaggtctttgaagataatacaaagtg 33638390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 26499787 - 26499733
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagt 99  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  26499787 atatgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagt 26499733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 512 - 566
Target Start/End: Complemental strand, 2319962 - 2319910
Alignment:
Q  512 aattaggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||||||||||||||  | ||||||||||||||| |||||||||||||||||||    
T  2319962 aattaggtttagggtt--ggaattagggtaaacatatttgttaggattagatata 2319910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 515 - 566
Target Start/End: Complemental strand, 8840707 - 8840656
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||||| ||||| ||||||||||||| |||||||| ||||||||||||||    
T  8840707 taggtttaaggtttggcaattagggtaagcatgtttgctaggattagatata 8840656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 30355491 - 30355546
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||| ||||| ||||||| ||||| ||||||||||||| ||||||    
T  30355491 atatgaagattgaagatcaatcgttcttagaaggtttttgaagacaataaaaagtg 30355546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 566
Target Start/End: Original strand, 23073449 - 23073503
Alignment:
Q  512 aattaggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||||| |||||||||  |||||||||||| ||||||||  |||||||||||||    
T  23073449 aattaggattagggtttgacaattagggtaagcatgtttgcaaggattagatata 23073503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 19219151 - 19219096
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  19219151 atatgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagtg 19219096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Complemental strand, 29129187 - 29129136
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  29129187 taggtttagggtttggcaattagggtaaacatgtttgctaggattagatata 29129136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 483 - 566
Target Start/End: Original strand, 49826438 - 49826519
Alignment:
Q  483 aacggttcaaatgttttggcgcccaaatgaattaggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||| |||||||||||| ||| ||||||||||| |||| ||||  | || ||| ||||||||||||||||||||||||||||    
T  49826438 aacggtccaaatgttttggagccaaaatgaattagatttaaggtt--ggaactagagtaaacatgtttgttaggattagatata 49826519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 19543068 - 19543009
Alignment:
Q  41 gagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||| | ||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  19543068 gagaatgtaaagattgaatttcaatagttcttagaaggtatttgaagacaatacaaagtg 19543009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 18474349 - 18474399
Alignment:
Q  50 aagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  18474349 aagattgaatttcaatggtacttagaaggtatttgaagacaatacaaagtg 18474399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 28422621 - 28422681
Alignment:
Q  39 ttgagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||| |||||||||||||||||||||| |  ||| ||||||||||||||||||||||||||    
T  28422621 ttgaggatatgaagattgaagttcaatgatg-ttagaaggtatttgaagacaatacaaagtg 28422681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 575
Target Start/End: Complemental strand, 53689298 - 53689237
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatat-ataaaggatt 575  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| |||| ||||||||||    
T  53689298 taggtttagggtttggcaattagggtaagcatgtttgctaggattaaatataataaaggatt 53689237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 10341966 - 10342016
Alignment:
Q  50 aagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||| ||| ||||||||| ||||| ||||||||||||||||||||    
T  10341966 aagattgaagatcagtggttcttagaaggtttttgaagacaatacaaagtg 10342016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 11475021 - 11475086
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtggaaaagaaaa 110  Q
    |||||| |||| ||| | ||||||||||| ||| |||||||||||||||||||||| |||| ||||    
T  11475021 atatgaggattcaagataaatggttcttagaagatatttgaagacaatacaaagtgaaaaaaaaaa 11475086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 566
Target Start/End: Complemental strand, 52126943 - 52126891
Alignment:
Q  514 ttaggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||| |||||||| || ||||||||||| |||||||| ||||||||||||||    
T  52126943 ttaggattagggttaagaaattagggtaagcatgtttgctaggattagatata 52126891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 23908214 - 23908159
Alignment:
Q  42 agaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaa 97  Q
    |||||||||||||| ||| ||||||||| ||| || || |||||||||||||||||    
T  23908214 agaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaatacaaa 23908159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 568
Target Start/End: Original strand, 14459263 - 14459316
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatatata 568  Q
    |||||||||||||| | ||||||| ||| |||||||| |||||||| |||||||    
T  14459263 taggtttagggtttggaaattaggttaagcatgtttgctaggattatatatata 14459316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 21829073 - 21829025
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaata 93  Q
    ||||||||||||||| |||||||||| |  ||||| |||||||||||||    
T  21829073 atatgaagattgaagatcaatggttcatcgaaggtctttgaagacaata 21829025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 14921979 - 14921924
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  14921979 atatgaagattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtg 14921924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 19541188 - 19541264
Alignment:
Q  23 agacatcaagtggaggtt-gagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagt 99  Q
    |||||||||||| ||| | ||| |||||||||||||||  ||||||||||||||||||| || |||||||||||||||    
T  19541188 agacatcaagtgaaggatcgaggatatgaagattgaagaccaatggttcttataaggta-ttaaagacaatacaaagt 19541264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 566
Target Start/End: Complemental strand, 26449145 - 26449099
Alignment:
Q  520 ttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  26449145 ttagggtttggcaattagggtaagcatgtttgctaggattagatata 26449099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 18236244 - 18236192
Alignment:
Q  44 aatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaa 96  Q
    ||||||||||||||||  |||||||||||| |||||  |||||||||||||||    
T  18236244 aatatgaagattgaaggccaatggttcttagaaggttgttgaagacaatacaa 18236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 1732722 - 1732777
Alignment:
Q  42 agaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaa 97  Q
    |||||||||||||||||| |||||| |||||| ||  ||||||||| |||||||||    
T  1732722 agaatatgaagattgaagatcaatgattcttagaatatatttgaaggcaatacaaa 1732777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 18818876 - 18818931
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||| | ||||| | ||||||||||| ||||| ||||||||||||||||||||    
T  18818876 atatgaaaactgaagattaatggttcttagaaggtctttgaagacaatacaaagtg 18818931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 100
Target Start/End: Complemental strand, 22525744 - 22525705
Alignment:
Q  61 tcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  22525744 tcaatggttcttagaaggtatttgaagacaacacaaagtg 22525705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 528
Target Start/End: Complemental strand, 33853676 - 33853641
Alignment:
Q  493 atgttttggcgcccaaatgaattaggtttagggttt 528  Q
    ||||||||||||||||||||||||| ||||||||||    
T  33853676 atgttttggcgcccaaatgaattagatttagggttt 33853641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 30998953 - 30999002
Alignment:
Q  53 attgaagttcaatggttcttataaggtatttgaagacaatacaaagtgga 102  Q
    ||||||| |||| |||||||| |||||  |||||||||||||||||||||    
T  30998953 attgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgga 30999002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 575
Target Start/End: Original strand, 31409719 - 31409777
Alignment:
Q  515 taggtttagggtttagcaattagggtaaacatgtttgttaggattagatatataaaggatt 575  Q
    |||||| ||||||| | ||||||||||| |||||||| |||||||  ||||||||||||||    
T  31409719 taggttaagggtttggaaattagggtaagcatgtttgctaggatt--atatataaaggatt 31409777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 566
Target Start/End: Complemental strand, 4768536 - 4768484
Alignment:
Q  514 ttaggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    |||||||||||||||  |||||||| ||| |||||||| || |||||||||||    
T  4768536 ttaggtttagggtttgacaattaggataagcatgtttgctaagattagatata 4768484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 22511097 - 22511169
Alignment:
Q  23 agacatcaagtggagg-ttgagaatatgaagattgaagttcaatggttcttataaggtatttgaagacaatac 94  Q
    |||||||||||| | | ||||| ||||||||||||| |||||||| ||| || | ||| ||||||||||||||    
T  22511097 agacatcaagtgaaagattgaggatatgaagattgatgttcaatgattcatagatggtttttgaagacaatac 22511169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 31262171 - 31262219
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaata 93  Q
    ||||||||||||||| | |||||||||||  |||| |||||||||||||    
T  31262171 atatgaagattgaagattaatggttcttagtaggtctttgaagacaata 31262219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 7742810 - 7742755
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  7742810 atatgaagactgaagatcaatggttcttagaaggtctttgaagacaatacaaagtg 7742755  T

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Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 23157744 - 23157689
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  23157744 atattaagattgaagttcaatggttcttataaggtatttaaagacaacagaaagtg 23157689  T

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Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 566
Target Start/End: Complemental strand, 40946762 - 40946716
Alignment:
Q  520 ttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  40946762 ttagggtttggcaattagggtaaacatgtttgctaggattagatata 40946716  T

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Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 40162277 - 40162216
Alignment:
Q  514 ttaggtttagggtttagcaattagggtaaacatgtttgttaggattagatat-ataaaggat 574  Q
    ||||||||||| |||  |||||||||||| |||||||||||||||||||||| |||||||||    
T  40162277 ttaggtttaggattttacaattagggtaagcatgtttgttaggattagatataataaaggat 40162216  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 11274270 - 11274219
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaa 96  Q
    |||||||||||||||  |||||||||||| ||||| ||||||||||||||||    
T  11274270 atatgaagattgaagaccaatggttcttagaaggtctttgaagacaatacaa 11274219  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 16352150 - 16352205
Alignment:
Q  520 ttagggtttagcaattagggtaaacatgtttgttaggattagatat-ataaaggat 574  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||    
T  16352150 ttagggtttggcaattagggtaagcatgtttgctaggattagatataataaaggat 16352205  T

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Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 18452752 - 18452697
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||| ||||||| ||||||||||||||||||| ||| || |||||||||||||    
T  18452752 atatgaaaattgaagatcaatggttcttataaggttttttaaaacaatacaaagtg 18452697  T

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Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 30072290 - 30072345
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||| | ||||||||||| ||||| ||| ||||||||||||||||    
T  30072290 atatgaagattgaagattaatggttcttaaaaggtttttaaagacaatacaaagtg 30072345  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 20694819 - 20694884
Alignment:
Q  50 aagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtggaaaagaaaatcatt 115  Q
    |||||||||| | ||||||||||| |||||||||||||||||||| |||   |||| |||||||||    
T  20694819 aagattgaagataaatggttcttagaaggtatttgaagacaataccaagcaaaaaaaaaaatcatt 20694884  T

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Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 19763823 - 19763771
Alignment:
Q  48 tgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||| |||| |||||||| ||||| |||||||| |||||||||||    
T  19763823 tgaagattgaagatcaagggttcttagaaggtttttgaagataatacaaagtg 19763771  T

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Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 17027702 - 17027756
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||||||||||||| |||| |||||| |||||  |||||||||||||||||||    
T  17027702 atatgaagattgaagtt-aatgcttcttagaaggttcttgaagacaatacaaagtg 17027756  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 26070648 - 26070695
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaat 92  Q
    ||||||||||||||| || ||||||| |||||||| ||||||||||||    
T  26070648 atatgaagattgaagatctatggttcgtataaggtttttgaagacaat 26070695  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 26330009 - 26329955
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||||| ||||||| |||| ||||| ||| ||||||||||||||||    
T  26330009 atatgaagattgaagt-caatggtccttagaaggttttttaagacaatacaaagtg 26329955  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 520 - 566
Target Start/End: Complemental strand, 4077890 - 4077844
Alignment:
Q  520 ttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||||||| ||||||||| ||| |||||||| ||||||||||||||    
T  4077890 ttagggtttggcaattaggataagcatgtttgctaggattagatata 4077844  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 20083641 - 20083691
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaataca 95  Q
    ||||||| | ||||||||||||||| |||||| ||||||||| ||||||||    
T  20083641 atatgaaaaatgaagttcaatggtttttataaagtatttgaaaacaataca 20083691  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 24410867 - 24410830
Alignment:
Q  48 tgaagattgaagttcaatggttcttataaggtatttga 85  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  24410867 tgaagattcaagatcaatggttcttataaggtatttga 24410830  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 16622616 - 16622565
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaa 97  Q
    |||||||||||||||  || ||||||||| ||||| |||||||||||||||||    
T  16622616 atatgaagattgaagaccagtggttcttagaaggt-tttgaagacaatacaaa 16622565  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 16634220 - 16634272
Alignment:
Q  44 aatatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaa 96  Q
    ||||||||| ||||||  |||||||||||| ||||| |||||||| |||||||    
T  16634220 aatatgaagtttgaagaccaatggttcttagaaggtttttgaagaaaatacaa 16634272  T

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Target: scaffold0171 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 21572 - 21626
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagt 99  Q
    ||||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||    
T  21572 atatgaagattgaagatcaatggttcttagaaggtttttaaagacaatacaaagt 21626  T

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Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 26895 - 26840
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||||| ||||||||||||||||||||| || ||  |||||||||||||||||||    
T  26895 atatgaaaattgaagttcaatggttcttagaaagttcttgaagacaatacaaagtg 26840  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 228110 - 228072
Alignment:
Q  62 caatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  228110 caatggttcttagaaggtatttgaagacaatacaaagtg 228072  T

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Target: scaffold0650 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 5709 - 5655
Alignment:
Q  45 atatgaagattgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    |||||||||||||| |||||||||||||| ||||| ||| |||| |||||||||||    
T  5709 atatgaagattgaa-ttcaatggttcttagaaggtctttaaagaaaatacaaagtg 5655  T

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Target: scaffold1149 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 1978 - 2015
Alignment:
Q  62 caatggttcttataaggtatttgaagacaatacaaagt 99  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  1978 caatggttcttatatggtttttgaagacaatacaaagt 2015  T

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Target: scaffold0185 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 2684 - 2729
Alignment:
Q  55 tgaagttcaatggttcttataaggtatttgaagacaatacaaagtg 100  Q
    ||||| |||||||||||||||||  |||||||||||||||| ||||    
T  2684 tgaagatcaatggttcttataagacatttgaagacaatacagagtg 2729  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 566
Target Start/End: Complemental strand, 97795 - 97743
Alignment:
Q  514 ttaggtttagggtttagcaattagggtaaacatgtttgttaggattagatata 566  Q
    ||||||||| ||||  |||||||||||   |||||||||||||||||||||||    
T  97795 ttaggtttacggttatgcaattagggtttgcatgtttgttaggattagatata 97743  T

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