View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11427_low_8 (Length: 548)
Name: NF11427_low_8
Description: NF11427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11427_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 506; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 9 - 530
Target Start/End: Complemental strand, 6706070 - 6705549
Alignment:
| Q |
9 |
agcataggtaatacggccgtgaccacaaccacgaaacatggtcgtgatcataaccagactccaacaagcagttcaggcttgttggagcttgagttgttac |
108 |
Q |
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| T |
6706070 |
agcataggtaatacggccgtgaccacaaccacgaaacatggtcgtgatcataaccagactccaacaagcagttcaggcttgctggagcttgagttgttac |
6705971 |
T |
|
| Q |
109 |
caacaaattgggctgcttcgcggcccaatttggagcaaccatcgaccagaggttgctcaaattttaattcttctttgtttttcgaacaaacgacatcttc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
6705970 |
caacaaattgggctgcttcgcggcccaatttggagcaaccatcgaccagaggttgctcaaattttaattcttctttgttttttgaacaaacgacatcttc |
6705871 |
T |
|
| Q |
209 |
ctcatcttcttcgtccttgtccatatctatgtcaatgccaagtggtccaacctatggtcatcaacaacaacatcaacatctagtaccacataactgggca |
308 |
Q |
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| T |
6705870 |
ctcatcttcttcgtccttgtccatatctatgtcaatgccaagtggtccaacctatggtcatcaacaacaacatcaacatctagtaccacataactgggca |
6705771 |
T |
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| Q |
309 |
tttggtccattattaccacactcaatggcaattaatatgccttcttctacagcttatgttccatcttcttctttatcacaatcttgttcttctttaaggc |
408 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
6705770 |
tttggtccattattaccacactcaatggcaattaatatgccttcttctacatcttatattccatcttcttctttatcacaatcttgttcttctttaaggc |
6705671 |
T |
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| Q |
409 |
catctttaggacctaattattatcctcaatatcatcatgcatcaccctttcactttccttcatcttcttcatcttctggatttgatcaatttgatgtggc |
508 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6705670 |
catctttaggacctaattattatcctcaatatcatcatgcatcaccctttcactttccttcatcttcttcatcttctggatttgatcaatttgatgtggc |
6705571 |
T |
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| Q |
509 |
cggtcctagctcatcatctaac |
530 |
Q |
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| T |
6705570 |
cggtcctagctcatcatctaac |
6705549 |
T |
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