View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11428_high_2 (Length: 651)

Name: NF11428_high_2
Description: NF11428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11428_high_2
NF11428_high_2
[»] chr6 (11 HSPs)
chr6 (18-494)||(11170743-11171219)
chr6 (18-465)||(11209565-11210012)
chr6 (18-453)||(11276127-11276562)
chr6 (21-448)||(11196899-11197326)
chr6 (18-468)||(11156443-11156895)
chr6 (21-448)||(11241005-11241438)
chr6 (21-347)||(11200064-11200394)
chr6 (18-347)||(11161310-11161651)
chr6 (62-444)||(11133211-11133593)
chr6 (540-626)||(11171285-11171371)
chr6 (584-626)||(8382104-8382146)
[»] scaffold1207 (1 HSPs)
scaffold1207 (18-468)||(1061-1490)
[»] chr7 (19 HSPs)
chr7 (84-162)||(8602213-8602291)
chr7 (84-162)||(8382727-8382805)
chr7 (81-161)||(8585558-8585638)
chr7 (81-160)||(8628768-8628847)
chr7 (584-627)||(41415672-41415715)
chr7 (584-626)||(2407358-2407400)
chr7 (584-626)||(7875716-7875758)
chr7 (81-155)||(27830733-27830807)
chr7 (81-162)||(8654686-8654767)
chr7 (81-162)||(13333307-13333388)
chr7 (82-162)||(6789749-6789829)
chr7 (81-161)||(10494226-10494306)
chr7 (324-438)||(6789991-6790105)
chr7 (84-162)||(8538275-8538353)
chr7 (382-444)||(8559870-8559932)
chr7 (364-438)||(8585281-8585355)
chr7 (584-626)||(40352671-40352713)
chr7 (330-439)||(3147757-3147866)
chr7 (88-149)||(29577533-29577594)
[»] scaffold0734 (2 HSPs)
scaffold0734 (411-465)||(6714-6770)
scaffold0734 (584-626)||(1916-1958)
[»] chr2 (4 HSPs)
chr2 (81-161)||(16661844-16661924)
chr2 (81-162)||(7542462-7542543)
chr2 (81-162)||(16657368-16657449)
chr2 (400-444)||(7542781-7542825)
[»] chr4 (2 HSPs)
chr4 (82-161)||(30775489-30775568)
chr4 (82-162)||(9335742-9335822)
[»] chr5 (1 HSPs)
chr5 (584-626)||(5003527-5003569)
[»] chr1 (3 HSPs)
chr1 (81-149)||(34466657-34466725)
chr1 (585-626)||(33096059-33096100)
chr1 (322-380)||(15595516-15595571)
[»] chr8 (1 HSPs)
chr8 (584-626)||(18896459-18896501)


Alignment Details
Target: chr6 (Bit Score: 409; Significance: 0; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 18 - 494
Target Start/End: Original strand, 11170743 - 11171219
Alignment:
Q  18 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11170743 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctca 11170842  T
Q  118 ttgagtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacgacat 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11170843 ttgagtattcgcaaaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 11170942  T
Q  218 cctccactgttgatccaaggaaggcttctgctatctcacgcattttcgccaataccatggatgaaatttgttctgcagcaaaatgcttttcctcgtcatt 317  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||||| |||| ||| ||||||||||| ||||||||||||||    
T  11170943 cctccactattgatccaaggaaggtttctgctatctcgcgcattttcaccaataccatggatgagatttcttcagcagcaaaatgtttttcctcgtcatt 11171042  T
Q  318 atagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccga 417  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11171043 atagttaacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccga 11171142  T
Q  418 ccaattagcctctttgcatctacaaaacaaaagagagttgtgtacactatgnnnnnnnnttggatcgctttatgaat 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  11171143 ccaattagcctctttgcatctacaaaacaaaagagagttgtgtacactatgaaaaacaattggatcgctttatgaat 11171219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 18 - 465
Target Start/End: Original strand, 11209565 - 11210012
Alignment:
Q  18 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctca 117  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  11209565 caaagtaccaccacctaagtcaaatatgaaaacatttctacgtccatgattaaatggtttcatgccaaagccatatgcaattgcagctgcagtaggctca 11209664  T
Q  118 ttgagtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacgacat 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11209665 ttgagtattcgcaaaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 11209764  T
Q  218 cctccactgttgatccaaggaaggcttctgctatctcacgcattttcgccaataccatggatgaaatttgttctgcagcaaaatgcttttcctcgtcatt 317  Q
    | |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||    
T  11209765 catccactgttgatccaaggaaggcttctgctgtctctcgcattttcgccaataccatggatgagatttcttcagcagcaaaatgcttttcctcgtcttt 11209864  T
Q  318 atagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccga 417  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| || | ||||||||||    
T  11209865 atagttaacaacaatcatgggtttgtcatttaggtcgccaattactttgaatggccacaacttcacatcactttctactatggggtcgcaaaatttccga 11209964  T
Q  418 ccaattagcctctttgcatctacaaaacaaaagagagttgtgtacact 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11209965 ccaattagcctctttgcatctacaaaacaaaagagagttgtgtacact 11210012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 18 - 453
Target Start/End: Original strand, 11276127 - 11276562
Alignment:
Q  18 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctca 117  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||||||||||    
T  11276127 caaagtaccaccacctaagtcaaatatgaaaacatttctacatccatgattaaatggtttcgtgttaaagccatatgcaattgcagctgcagtaggctca 11276226  T
Q  118 ttgagtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacgacat 217  Q
    || | |||||||| ||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  11276227 tttattattcgcataacgtttaggccagcaatagcacccgcatctcgagtagactggcgctgtgagtcattaaagtatgcaggcacagttataacaacat 11276326  T
Q  218 cctccactgttgatccaaggaaggcttctgctatctcacgcattttcgccaataccatggatgaaatttgttctgcagcaaaatgcttttcctcgtcatt 317  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||    
T  11276327 cctccactgttaatccaaggaaggcttctgctatctcgcgcattttcgccaataccatggatgagatttcttcagcagtaaaatgcttttcctcgtcatt 11276426  T
Q  318 atagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccga 417  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11276427 atagttaacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccga 11276526  T
Q  418 ccaattagcctctttgcatctacaaaacaaaagaga 453  Q
    ||||||||||||||||||||||||||||||||||||    
T  11276527 ccaattagcctctttgcatctacaaaacaaaagaga 11276562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 21 - 448
Target Start/End: Original strand, 11196899 - 11197326
Alignment:
Q  21 agtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattg 120  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  11196899 agtaccaccacctaaatcaaaaatgaaaacatgtctacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattg 11196998  T
Q  121 agtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacgacatcct 220  Q
    | |||||||| ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  11196999 attattcgcataacattgaggccagcaataacacccgcatctcgagtggactggcgttgtgagtcattaaagtaagcaggcacagttataacaacatcct 11197098  T
Q  221 ccactgttgatccaaggaaggcttctgctatctcacgcattttcgccaataccatggatgaaatttgttctgcagcaaaatgcttttcctcgtcattata 320  Q
     |||||||||||||||| | ||||| ||||||||   |||||| ||||||||||| ||||| |||| ||| |||||||||||||||||||||||||||||    
T  11197099 tcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattata 11197198  T
Q  321 gttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccgacca 420  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||| |||||| |||||||||||| || |  || | ||| |||| ||||    
T  11197199 gttaacaacaatcatgggtttgtcattgaggtcgccaattactttgaagggccacgacttcatatcactttgtacgattgagtcgcaaaacttcctacca 11197298  T
Q  421 attagcctctttgcatctacaaaacaaa 448  Q
    ||||||||||||||||||||||||||||    
T  11197299 attagcctctttgcatctacaaaacaaa 11197326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 18 - 468
Target Start/End: Original strand, 11156443 - 11156895
Alignment:
Q  18 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctca 117  Q
    |||||||||||| ||||| |||||||||||||||| | |||||||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||    
T  11156443 caaagtaccacctcctaaatcaaaaatgaaaacatgtttacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctca 11156542  T
Q  118 ttgagtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacgacat 217  Q
    |||| |||||||| ||||||||||||||||||  ||||||||||| | || |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  11156543 ttgattattcgcataacattgaggccagcaataacacccgcatcttgggtggactggcgttgtgagtcattaaagtaagcaggcacagttataacaacat 11156642  T
Q  218 cctccactgttgatccaaggaaggcttctgctatctcacgcattttcgccaataccatggatgaaatttgttctgcagcaaaatgcttttcctcgtcatt 317  Q
    ||| |||||||||||||||| |  |||| ||||||||   |||||| ||||||||||| ||||| |||| ||| ||||||||||||||||||||||| ||    
T  11156643 ccttcactgttgatccaaggtaaacttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcttt 11156742  T
Q  318 atagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccga 417  Q
    |||||||||||||||||| ||||||||||| ||||  |||||||||||||| |||||| |||||| |||||||||||| || |  || | ||| |||| |    
T  11156743 atagttaacaacaatcatgggtttgtcattgaggttgccaattactttgaagggccacgacttcatatcactttgtacgattgagtcgcaaaacttccta 11156842  T
Q  418 ccaattagcctctttgcatctacaaaacaa--aagagagttgtgtacactatg 468  Q
    ||||||||||||||||||||||||||||||  || ||||||| ||||||||||    
T  11156843 ccaattagcctctttgcatctacaaaacaaacaaaagagttgagtacactatg 11156895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 21 - 448
Target Start/End: Complemental strand, 11241438 - 11241005
Alignment:
Q  21 agtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattg 120  Q
    ||||||||||||||| || ||||| | ||||| |||||||||||||||||  | ||||| || ||||||||||||||||||| |||||||||||||| ||    
T  11241438 agtaccaccacctaaatcgaaaattagaacatgtctacatccatgattaagagttttcatgttaaggccatatgcaattgcaactgcagtaggctcagtg 11241339  T
Q  121 agtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacgacatcct 220  Q
    | ||||| |||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  11241338 attattcacaaaactttgaggccagcaatagcacccgcatctcgaatagactggcgttgtgagtcattaaagtaagcaggcacagttataacaacatcct 11241239  T
Q  221 ccactgttgatccaaggaaggcttctgctatctcacgcattttcgccaataccatggatgaaatttgttctgcagcaaaatgcttttcctcgtcattata 320  Q
     |||||||||||||||| | ||||| |||||||    |||||| ||||||||||| ||||| |||| ||| ||||| |||||||||||||||||||||||    
T  11241238 tcactgttgatccaaggtaagcttcagctatcttggccatttttgccaataccatcgatgagatttcttcagcagcgaaatgcttttcctcgtcattata 11241139  T
Q  321 gttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcac------taaatttc 414  Q
    |||||||| | ||||  |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||  ||||| ||||      |||| |||    
T  11241138 gttaacaatagtcatgtgtttgtcattcaggtcgccaattactttgaagggccacaacttcatatcactttgtatgatggggtcacaaaacttaaacttc 11241039  T
Q  415 cgaccaattagcctctttgcatctacaaaacaaa 448  Q
    | ||||||||||||||||||||||||||||||||    
T  11241038 ctaccaattagcctctttgcatctacaaaacaaa 11241005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 347
Target Start/End: Original strand, 11200064 - 11200394
Alignment:
Q  21 agtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattg 120  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  11200064 agtaccaccacctaaataaaaaatgaaaacatttctacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattg 11200163  T
Q  121 agtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactgg----cgttgtgagtcattaaagtatgcaggcacagttataacgaca 216  Q
    | ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    |||||||| ||||||||||||| ||||||| ||||||| |||    
T  11200164 attattcgcaaaacattgaggccagcaatagcacccgcatctcaagtagactggcgtacgttgtgaatcattaaagtatgtaggcacaattataacaaca 11200263  T
Q  217 tcctccactgttgatccaaggaaggcttctgctatctcacgcattttcgccaataccatggatgaaatttgttctgcagcaaaatgcttttcctcgtcat 316  Q
    |||| |||||||||||||||| | ||||| || ||||| | |||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  11200264 tccttcactgttgatccaaggtaagcttcagcaatctcgcccatttttgtcaataccatggatgagatttcttctgcagcaaaatgcttttcctcgtcat 11200363  T
Q  317 tatagttaacaacaatcataggtttgtcatt 347  Q
    ||||||||||||||||||| |||||||||||    
T  11200364 tatagttaacaacaatcatgggtttgtcatt 11200394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 18 - 347
Target Start/End: Original strand, 11161310 - 11161651
Alignment:
Q  18 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggct-- 115  Q
    |||||||||||||||||| | |||||||||||||| | |||||||||||||||| ||||||| |||||| ||||||||||||||| ||||||||||||      
T  11161310 caaagtaccaccacctaaataaaaaatgaaaacatgtatacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcatctgcagtaggctag 11161409  T
Q  116 ------cattgagtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgt----tgtgagtcattaaagtatgcaggcacag 205  Q
          |||||| || ||||| |||||| |||||| |||| |||||||||||||||||||||||||||    |||||  |||||||||||| |||||||     
T  11161410 tagagtcattgattactcgcataacattaaggccaacaatagcacccgcatctcgagtagactggcgtacgttgtgaaacattaaagtatgtaggcacaa 11161509  T
Q  206 ttataacgacatcctccactgttgatccaaggaaggcttctgctatctcacgcattttcgccaataccatggatgaaatttgttctgcagcaaaatgctt 305  Q
    ||||||| ||||||| |||||||||||||||| | ||||| || ||||| | |||||| | ||||||||||||||| |||| ||||||||||||||||||    
T  11161510 ttataacaacatccttcactgttgatccaaggtaagcttcagcaatctcgcccatttttgtcaataccatggatgagatttcttctgcagcaaaatgctt 11161609  T
Q  306 ttcctcgtcattatagttaacaacaatcataggtttgtcatt 347  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  11161610 ttcctcgtcattatagttaacaacaatcatgggtttgtcatt 11161651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 62 - 444
Target Start/End: Original strand, 11133211 - 11133593
Alignment:
Q  62 catgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatc 161  Q
    |||||||||| ||||||  |||||| |||||||||||||||||||| |||||||| |||| |||||||| ||| ||||| || |||||  |||| |||||    
T  11133211 catgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacctgcaataacacctgcatc 11133310  T
Q  162 tcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacgacatcctccactgttgatccaaggaaggcttctgctatctcacgcatt 261  Q
    || |||||  |||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| |  ||||||| |||||||| |||    
T  11133311 tctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacatccttcactgttgatccaaggtaaacttctgcaatctcacgaatt 11133410  T
Q  262 ttcgccaataccatggatgaaatttgttctgcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcattcaggtcaccaatta 361  Q
    || | ||||||||| ||||| ||||  || ||||||||||| ||||||||  |||| || || ||||||||  | ||||||||||| | | |||||||||    
T  11133411 tttgtcaataccattgatgatatttcctcagcagcaaaatgtttttcctctccattgtaattgacaacaatattgggtttgtcatttatgccaccaatta 11133510  T
Q  362 ctttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccgaccaattagcctctttgcatctacaaaa 444  Q
    |||| ||||||||||| |||| |||||| || ||||| || ||||||||||  | |||||| |||||||| ||||||||||||    
T  11133511 ctttaaatggccacaatttcatatcactctgaactatagggtcactaaattctctaccaatgagcctcttcgcatctacaaaa 11133593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 540 - 626
Target Start/End: Original strand, 11171285 - 11171371
Alignment:
Q  540 gcttgtatagaaaatactcttatatatttaaccctataagaaatacaatcttgggattttggtcccttataaaaaacaataacaaat 626  Q
    |||||||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11171285 gcttgtatagaaaatactattatatatttaaccccgtaagtaatacaatcttgggattttggtcccttataaaaaacaataacaaat 11171371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 8382104 - 8382146
Alignment:
Q  584 acaatcttgggattttggtcccttataaaaaacaataacaaat 626  Q
    |||||||||  |||||| |||||||||||||||||||||||||    
T  8382104 acaatcttgcaattttgatcccttataaaaaacaataacaaat 8382146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 18 - 468
Target Start/End: Original strand, 1061 - 1490
Alignment:
Q  18 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctca 117  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||     |||||||   ||||| |||||||||||||||||||||||||||||||    
T  1061 caaagtaccaccacctaagtcaaaaatgaaaacatttctatgtccatgtg---atggttttgtgtcaaagccatatgcaattgcagctgcagtaggctca 1157  T
Q  118 ttgagtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacgacat 217  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  1158 ttgagtattcccaaaacattgaggccagcaatagcacctgcatctcgagtagattggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 1257  T
Q  218 cctccactgttgatccaaggaaggcttctgctatctcacgcattttcgccaataccatggatgaaatttgttctgcagcaaaatgcttttcctcgtcatt 317  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||    
T  1258 cctccactgttgatccaaggaaggcttctgctgtctcgcgcattttcgccaataccatggatgagatttcttcagcagcaaaatgcttttcctcgtcatt 1357  T
Q  318 atagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccga 417  Q
    |||||||||||||||||| ||||| |                   | ||||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  1358 atagttaacaacaatcatgggtttat------------------gtatgaatggccacaacttcacatcactttctactatgggatcgcaaaatttccga 1439  T
Q  418 ccaattagcctctttgcatctacaaaacaaaagagagttgtgtacactatg 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1440 ccaattagcctctttgcatctacaaaacaaaagagagttgtgtacactatg 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 8602213 - 8602291
Alignment:
Q  84 aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct 162  Q
    ||||||||||||||  ||||||||||| |||||||||| ||| ||||  |||||||| |||||||||||||| ||||||    
T  8602213 aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgagaccagcaatggcaccagcatct 8602291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 8382805 - 8382727
Alignment:
Q  84 aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct 162  Q
    ||||||||||||||  ||||| ||||| |||||||||| ||| ||||  ||||||||||||||||| ||||| ||||||    
T  8382805 aaggccatatgcaagagcagcggcagttggctcattgattatccgcattacattgaggccagcaatcgcaccagcatct 8382727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 8585638 - 8585558
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatc 161  Q
    |||||||||||||||||| || || ||||| || ||||||| ||| | || |||||| ||||||||||||||||| |||||    
T  8585638 gtcaaggccatatgcaatagctgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcaccagcatc 8585558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 8628768 - 8628847
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcat 160  Q
    |||||||||||||||||| || || ||||| || ||||||| ||| | || |||||| ||||||||||||||||| ||||    
T  8628768 gtcaaggccatatgcaatagctgcagcagtggggtcattgattatcctcataacattaaggccagcaatggcaccagcat 8628847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 584 - 627
Target Start/End: Original strand, 41415672 - 41415715
Alignment:
Q  584 acaatcttgggattttggtcccttataaaaaacaataacaaatt 627  Q
    ||||||||| |||||||| |||||||||||||||||||||||||    
T  41415672 acaatcttgcgattttggccccttataaaaaacaataacaaatt 41415715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 2407358 - 2407400
Alignment:
Q  584 acaatcttgggattttggtcccttataaaaaacaataacaaat 626  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  2407358 acaatcttgcgattttggtcccctataaaaaacaataacaaat 2407400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 7875716 - 7875758
Alignment:
Q  584 acaatcttgggattttggtcccttataaaaaacaataacaaat 626  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  7875716 acaatcttgcgattttggtcccctataaaaaacaataacaaat 7875758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 27830807 - 27830733
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacc 155  Q
    |||||||||||||||||| || || |||||||||||  | | ||| |||| |||||| |||||||||||||||||    
T  27830807 gtcaaggccatatgcaatagctgcagcagtaggctcgcttattatccgcataacattaaggccagcaatggcacc 27830733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 8654686 - 8654767
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct 162  Q
    |||||||||||||||||| || || |||||||| ||||||||||| || |  || || || |||||||||||||| ||||||    
T  8654686 gtcaaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccagcaatggcaccagcatct 8654767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 13333388 - 13333307
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct 162  Q
    |||||||||||||||||| || || |||||||| ||||||| |||||| |  | ||| ||||||||||| ||||| ||||||    
T  13333388 gtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgatattaaggccagcaatagcaccagcatct 13333307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 6789749 - 6789829
Alignment:
Q  82 tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct 162  Q
    ||||||||||||||||  ||||| || || || ||||||| |||||| | |||||| || |||||||||||||| ||||||    
T  6789749 tcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatct 6789829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 10494306 - 10494226
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatc 161  Q
    |||||||||||||||||| || || |||||||| ||||||| ||| || |  ||||| ||||||||||| ||||| |||||    
T  10494306 gtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcaccagcatc 10494226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 438
Target Start/End: Original strand, 6789991 - 6790105
Alignment:
Q  324 aacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccgaccaatt 423  Q
    |||||||||||| || |||||||| | | || |||| || ||||||||||| ||| ||| |||| |||| || |  | ||||||||| |||| |||||||    
T  6789991 aacaacaatcatgggcttgtcattgacgccagcaatgaccttgaatggccaaaacatcatatcattttgaacaacagaatcactaaacttcctaccaatt 6790090  T
Q  424 agcctctttgcatct 438  Q
    | |||||| ||||||    
T  6790091 aacctcttagcatct 6790105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 8538275 - 8538353
Alignment:
Q  84 aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct 162  Q
    |||||| |||||||  ||||| || ||||| ||||||| ||| ||||  |||||||||||||||||| |||| ||||||    
T  8538275 aaggccgtatgcaagagcagcagctgtaggttcattgattatccgcattacattgaggccagcaatgacaccagcatct 8538353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 444
Target Start/End: Original strand, 8559870 - 8559932
Alignment:
Q  382 acatcactttgtactatgggatcactaaatttccgaccaattagcctctttgcatctacaaaa 444  Q
    ||||||||||| ||||||| ||||||  ||||||  ||||||| ||||||||||||| |||||    
T  8559870 acatcactttggactatggaatcactgtatttccttccaattaacctctttgcatctgcaaaa 8559932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 364 - 438
Target Start/End: Complemental strand, 8585355 - 8585281
Alignment:
Q  364 ttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccgaccaattagcctctttgcatct 438  Q
    ||||||||||||||| | | |||| |||| || | |||||||||||| |||| |||||||| |||||| ||||||    
T  8585355 ttgaatggccacaacattatatcattttgaacaacgggatcactaaacttcctaccaattaacctcttggcatct 8585281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 40352671 - 40352713
Alignment:
Q  584 acaatcttgggattttggtcccttataaaaaacaataacaaat 626  Q
    ||||||||| |||||||||| | ||||||||||||||||||||    
T  40352671 acaatcttgcgattttggtcgcctataaaaaacaataacaaat 40352713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 439
Target Start/End: Original strand, 3147757 - 3147866
Alignment:
Q  330 aatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccgaccaattagcctc 429  Q
    |||||| |||||||||||||   | | ||| || ||||||||||||||| ||| |||| |||| || |  | ||||| ||| |||| |||||||| ||||    
T  3147757 aatcatgggtttgtcattcactccgcaaatgaccttgaatggccacaacatcatatcattttgaacaacagaatcaccaaacttcctaccaattaacctc 3147856  T
Q  430 tttgcatcta 439  Q
    ||||||||||    
T  3147857 tttgcatcta 3147866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 29577594 - 29577533
Alignment:
Q  88 ccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaat 149  Q
    |||||||||| |||||| ||||| || ||||||| ||| ||||  |||||||||||||||||    
T  29577594 ccatatgcaagtgcagcagcagttggttcattgattatccgcattacattgaggccagcaat 29577533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 6714 - 6770
Alignment:
Q  411 tttccgaccaattagcctctttgcatctacaaaacaaa-ag-agagttgtgtacact 465  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||    
T  6714 tttccaaccaattagcctctttgcatctacaaaacaaacagaagagttgtgtacact 6770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 1916 - 1958
Alignment:
Q  584 acaatcttgggattttggtcccttataaaaaacaataacaaat 626  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  1916 acaatcttgagattttggtcccctataaaaaacaataacaaat 1958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 16661924 - 16661844
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatc 161  Q
    |||||||||||||||||| || |||||||| || ||||||| ||| | || ||| || ||||||||||||||||| |||||    
T  16661924 gtcaaggccatatgcaatagctgctgcagtgggttcattgattatcctcacaacgttaaggccagcaatggcaccagcatc 16661844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 7542462 - 7542543
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct 162  Q
    |||||||||||||||||  || || |||||||| ||||| | |   | || |||||||||||||||||||||||||||||||    
T  7542462 gtcaaggccatatgcaacagctgcggcagtaggttcattcattgccctcataacattgaggccagcaatggcacccgcatct 7542543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 16657449 - 16657368
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct 162  Q
    |||||| ||||||||||| || || |||||||| |||||||  ||||| |  ||||| |||||||| |||||||| ||||||    
T  16657449 gtcaagaccatatgcaatagctgcagcagtaggttcattgataattcgaatgacattaaggccagcgatggcaccagcatct 16657368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 7542781 - 7542825
Alignment:
Q  400 ggatcactaaatttccgaccaattagcctctttgcatctacaaaa 444  Q
    ||||||||||| |||| |||||||| |||||| ||||||||||||    
T  7542781 ggatcactaaacttcctaccaattaacctcttagcatctacaaaa 7542825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 30775489 - 30775568
Alignment:
Q  82 tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatc 161  Q
    ||||| ||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||||||||| |||||    
T  30775489 tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc 30775568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 9335822 - 9335742
Alignment:
Q  82 tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct 162  Q
    ||||||||||||||||| || || |||||||| ||||||| ||| || |  ||||| ||||||||||| | ||| ||||||    
T  9335822 tcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagtaccagcatct 9335742  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 5003527 - 5003569
Alignment:
Q  584 acaatcttgggattttggtcccttataaaaaacaataacaaat 626  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  5003527 acaatcttgcgattttgatcccttataaaaaacaataacaaat 5003569  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 34466725 - 34466657
Alignment:
Q  81 gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaat 149  Q
    |||||| ||||||||||| || || ||||| || ||||||| |||| |||||||||| |||||||||||    
T  34466725 gtcaagtccatatgcaatagctgcagcagtgggttcattgattatttgcaaaacattaaggccagcaat 34466657  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 626
Target Start/End: Original strand, 33096059 - 33096100
Alignment:
Q  585 caatcttgggattttggtcccttataaaaaacaataacaaat 626  Q
    ||||||||  ||||||||||||||||||||| ||||||||||    
T  33096059 caatcttgcaattttggtcccttataaaaaataataacaaat 33096100  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 380
Target Start/End: Original strand, 15595516 - 15595571
Alignment:
Q  322 ttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaactt 380  Q
    ||||||| |||||| |||||||||||||   ||||||| || |||||||||||||||||    
T  15595516 ttaacaataatcatgggtttgtcattca---caccaatgaccttgaatggccacaactt 15595571  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 18896459 - 18896501
Alignment:
Q  584 acaatcttgggattttggtcccttataaaaaacaataacaaat 626  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||    
T  18896459 acaatcttgcgattttggtcccctataaaaaacaataataaat 18896501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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