View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1142_low_10 (Length: 308)
Name: NF1142_low_10
Description: NF1142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1142_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 43571490 - 43571416
Alignment:
| Q |
68 |
ttatacttatggtggtgatataactaatcaaatagtacatattaacgataactcaaattagtgcacgtgttaagg |
142 |
Q |
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| T |
43571490 |
ttatacttatggtggtgatataactaatcaaatagtacatgttaacgataactcaaattagtgcacgtgttaagg |
43571416 |
T |
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