View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1142_low_19 (Length: 266)
Name: NF1142_low_19
Description: NF1142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1142_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 30083675 - 30083441
Alignment:
| Q |
1 |
tcttctctttgttgtttatgcatcaacaacaattttagagtagagttccaaaataagatttgaatgtcaggatcttctaaacatatataacaaatgtaac |
100 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
30083675 |
tcttctctatgttgtttatgcatcaacaacaattttagagtagagttccaaaataagatttgaatgtcaggatct---aaacatatataacaaatgtaac |
30083579 |
T |
|
| Q |
101 |
atcccgcatttccctttaatgaataatttaaaatagctaggatcttctattattatcattgaataatgcatgtaggttaattcctaaacttgaggttttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30083578 |
atcccgcatttccctttaatgaataatttaaaatagctaggatcttctattattatcattgaataatgcatgtaggttaattcctaaacttgaggttttt |
30083479 |
T |
|
| Q |
201 |
agttgcattaggagtaacatgtgttagagtttgaagta |
238 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
30083478 |
agttgcattaggagtaacatgtgttagagtttgaagta |
30083441 |
T |
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