View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1142_low_20 (Length: 252)
Name: NF1142_low_20
Description: NF1142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1142_low_20 |
 | |
|
| [»] scaffold0218 (1 HSPs) |
| | |
|
| [»] scaffold0145 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0063 (1 HSPs) |
| | |
|
| [»] scaffold0725 (1 HSPs) |
| | |
|
| [»] scaffold0601 (1 HSPs) |
| | |
|
| [»] scaffold0216 (1 HSPs) |
| | |
|
| [»] scaffold0054 (1 HSPs) |
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|
| [»] scaffold0239 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 24505564 - 24505327
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttatttgttgtgttgttttctgtatggtggttgtacct |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
24505564 |
tgatatttatttaatatgcatgctttttcctattattatgttattataggatttctcaccccttatttgttgtgttgttttctggatggtggttgtacct |
24505465 |
T |
|
| Q |
101 |
tgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
24505464 |
tgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggttgagatgaggggatgccctccgtttagttatgttatttagtagttga |
24505365 |
T |
|
| Q |
201 |
ataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
24505364 |
ataagcatgtagtcgctacgagctctgatattgtaaca |
24505327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 155; Significance: 2e-82; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10907484 - 10907722
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| |||||| |||| ||| ||||||||||||||| |||||| |
|
|
| T |
10907484 |
tgatatttatttaatatgcgtgcttttccctattatcatgttatggcaggatttctcaccccttattttgttgcgttcttttctgtatggtggctgtacc |
10907583 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||| | || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
10907584 |
ttgagtacagatattcaggttgagaaggagtagctatgagacgttttagaaggtggagatgaggggattccctccgtttagttatgttatttagtagttg |
10907683 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| |||| |
|
|
| T |
10907684 |
aataagtatgtagtcgctacgagctttgatattgtaaca |
10907722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10642018 - 10642256
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||| | | |||||||| ||| |||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
10642018 |
tgatatttatttaatatgcgtgtttttccctattattatgttatgacaagatttctcgccccttattttgttgtgttattttctgtatggtggttgtacc |
10642117 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||| || ||||| ||||||||||||||||||| || |||||||||||| ||||| || ||||||||||| | |||||||| ||||||||||| |||| |
|
|
| T |
10642118 |
ttgagtgcatatacttaggttgataaggagtagttatgggacgttttagaaagtggaaataaggggatgccccccgtttagttttgttatttagttgttg |
10642217 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||| ||||||| | |||||||||||||||||| |||| |
|
|
| T |
10642218 |
aataaacatgtagccactacgagctctgatattgtaaca |
10642256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 48 - 238
Target Start/End: Complemental strand, 14964977 - 14964787
Alignment:
| Q |
48 |
aggatttctcaccctttatt-tgttgtgttgttttctgtatggtggttgtaccttgagtacagatactcaggttgataaggagtagttgtgtgacgtttt |
146 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
14964977 |
aggatttctcaccccttattatgttgtgttgttttctgtatggtgcttgtaccttgagtacagatactcaggttgacaaggagtagttgtgggacgtttt |
14964878 |
T |
|
| Q |
147 |
agaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||||||||| ||||||| | |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||| |||| |
|
|
| T |
14964877 |
agaaggtggagatgagggggtgccctccg-ttagttctgttatttagtagttgaataagaatgtagtcactacaagctctgatattgtaaca |
14964787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 28585056 - 28585194
Alignment:
| Q |
24 |
ttttccctattattatgttattataggatttctca-ccctttatttgttgtgttgttt-tctgtatggtggttgtaccttgagtacagatactcaggttg |
121 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||| |||||||||||||||||||||| || | |||||||||||| ||||||||| | | ||| |||| |
|
|
| T |
28585056 |
ttttccttattattatgttattactggatttctcacccctttatttgttgtgttgtttccctttgtggtggttgtactttgagtacaaacattcacgttg |
28585155 |
T |
|
| Q |
122 |
ataaggagtagttgtgtgacgttttagaaggtggagatg |
160 |
Q |
| |
|
|| | ||||| | || || |||||||||||||| |||| |
|
|
| T |
28585156 |
atgaagagtattcgttggatgttttagaaggtggcgatg |
28585194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14980982 - 14981062
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttatt-tgttgtgttgttt |
80 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||||| | |||| |||||||||||||||| ||| ||||||||||||| |
|
|
| T |
14980982 |
tgatatttatttaatgtgcatgcttttctctattattttattatggcaggatttctcacccttgattatgttgtgttgttt |
14981062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 20147441 - 20147585
Alignment:
| Q |
7 |
ttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttatttgttgtgttgttttctgtatggtggttgtaccttgagta |
106 |
Q |
| |
|
||||||||| || || ||||||||||||||||||||| || |||| |||||| |||||| | |||||| |||||||||||||||| ||||||| |
|
|
| T |
20147441 |
ttatttaatgtgtctgtttttccctattattatgttatagcagtatttatcaccccttattt----tattgtttaatgtatggtggttgtactttgagta |
20147536 |
T |
|
| Q |
107 |
cagatactcaggttgataaggagtagttgtgtgacgttttagaaggtgga |
156 |
Q |
| |
|
|| | ||||| ||| | |||||||| ||| |||| ||||||||||||| |
|
|
| T |
20147537 |
catacactcaagttaaggaggagtagccgtgggacg-tttagaaggtgga |
20147585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 22185387 - 22185243
Alignment:
| Q |
7 |
ttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttatttgttgtgttgttttctgtatggtggttgtaccttgagta |
106 |
Q |
| |
|
||||||||| || || ||||||||||||||||||||| || |||| |||||| |||||| | |||||| |||||||||||||||| ||||||| |
|
|
| T |
22185387 |
ttatttaatgtgtctgtttttccctattattatgttatagcagtatttatcaccccttattt----tattgtttaatgtatggtggttgtactttgagta |
22185292 |
T |
|
| Q |
107 |
cagatactcaggttgataaggagtagttgtgtgacgttttagaaggtgga |
156 |
Q |
| |
|
|| | ||||| ||| | |||||||| ||| |||| ||||||||||||| |
|
|
| T |
22185291 |
catacactcaagttaaggaggagtagccgtgggacg-tttagaaggtgga |
22185243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 144; Significance: 8e-76; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 22615399 - 22615630
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
22615399 |
tgatatttatttagtatatgtgtttttccctattattatgttatggcaggatttctcaccccttattttgttgtgttgttttatgtatgatggttgtacc |
22615498 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |
|
|
| T |
22615499 |
ttgagtacagatactcaggttgacaaggagtagctatgggacgttttagaaggtggagatgaggggatgccctccgtttagttctgttatttagtaattg |
22615598 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatat |
231 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |
|
|
| T |
22615599 |
aataagcatgtagtctccacgagctctgatat |
22615630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 9079746 - 9079509
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||| |||||||||||| |||| |||| ||||||| |
|
|
| T |
9079746 |
tgatatttatttaatgtgcatgcttttctctattattatgttatggcatgatttctcaccctttattttgttgtgttgtttcgtgtacggtgattgtacc |
9079647 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||| |||| ||||||||||| | ||||||||| ||||||||||| | ||||| |||||||||||||||| |
|
|
| T |
9079646 |
ttgagtatagatactcaggttgacaaggagtagctgtgggacgttttagaggatggagatgatgggatgccctccgcctagttctgttatttagtagttg |
9079547 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
9079546 |
aataag-ttgtagtcgctacgagctctgatattgtaaca |
9079509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 48376200 - 48375963
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||| |||||| |||||||||||||||||| |||| | |||| |
|
|
| T |
48376200 |
tgatatttatttaatgtgcatgcttttccctgttattttgttatggcaggatttctcaccccttattttgttgtgttgttttctgtacggtgactatacc |
48376101 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||| ||||||||||| | ||||||||| ||||||||||| |||| ||| |||||||||||||||| |
|
|
| T |
48376100 |
ctgagtacagatactcaggttgacaaggagtagatgtgggacgttttagaggatggagatgatgggatgccctccgtttggttttgttatttagtagttg |
48376001 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
48376000 |
aataag-ttgtagtcgctacgagctctgatattgtaaca |
48375963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 16059951 - 16059718
Alignment:
| Q |
1 |
tgatatttattt-aatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtac |
98 |
Q |
| |
|
|||||||||||| ||| |||||| |||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||| |||| ||||| |
|
|
| T |
16059951 |
tgatatttattttaatgtgcatgtttttccctattattttgttatggcaggatttctcaccccttattttgttgtgttgttttctgtacggtgactgtac |
16059852 |
T |
|
| Q |
99 |
cttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagtt |
198 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||| |||| ||||||||||| | ||||||||| |||||||| || |||| ||| ||||||||||||||| |
|
|
| T |
16059851 |
cctgagtacagatactcaggttgacaaggagtagctgtgggacgttttagaggatggagatgatgggatgccttccgtttggttttgttatttagtagtt |
16059752 |
T |
|
| Q |
199 |
gaataagcatgtagtcgctacgagctctgatattg |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
16059751 |
gaataa-tttgtagtcgctacgagctctgatattg |
16059718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 4532418 - 4532646
Alignment:
| Q |
3 |
atatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacctt |
101 |
Q |
| |
|
|||||||||||| ||||||| ||| |||||||||||||||| | ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4532418 |
atatttatttaacgtgcatgcattttcctattattatgttatgacaggatacctcaccccttattttgttgtgttgttttctgtatggtggttgtacctt |
4532517 |
T |
|
| Q |
102 |
gagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaa |
201 |
Q |
| |
|
|||| ||||||||| |||||| |||||||| |||| |||||||||||||| |||||||||||||||||| ||||||| | |||| ||||||||||| |
|
|
| T |
4532518 |
gagtgcagatactcgggttgacgaggagtagctgtgggacgttttagaaggcaaagatgaggggatgccctccgtttagtactcttatctagtagttgaa |
4532617 |
T |
|
| Q |
202 |
taagcatgtagtcgctacgagctctgata |
230 |
Q |
| |
|
||| |||||||||||||| |||| ||||| |
|
|
| T |
4532618 |
taatcatgtagtcgctacaagctttgata |
4532646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 37946520 - 37946758
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||||||||||||||| | | ||||| |||||| |||||| || ||||||||||| ||| ||||| ||||| |
|
|
| T |
37946520 |
tgatatttatttaaggtgcatactttttcctattattatgttatgacatgatttatcaccccttattttgtcgtgttgttttccgtaaggtggatgtact |
37946619 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| | ||| |||| |||| ||||||||||||||||||||| |||||||| ||||| || || |||| |
|
|
| T |
37946620 |
ttgagtacagatactcaggttgatgaggagtagctacaagacatttttgaagatggagatgaggggatgccctccgtttagttctgttacttggtggttg |
37946719 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
37946720 |
aataagcatgtagtcgctatgagctctgatattgtaaca |
37946758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 13486462 - 13486654
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
13486462 |
tgatatttatttaatatgtgagtttttccctattattatgttatgatagg-----tcacccaatattttgttgtgttgttttatgtatggtggttgtacc |
13486556 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagt |
197 |
Q |
| |
|
||||||||||||||||||||||| || |||||| | || ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| |
|
|
| T |
13486557 |
ttgagtacagatactcaggttgacaatgagtagctatgggacgttttagaaggtggagatgaggagatgccctccgtttagttttgttatttagtagt |
13486654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20025396 - 20025336
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccc |
61 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
20025396 |
tgatatttatttaatatgcatgtttttccctattattatgttatggcaggatttcttaccc |
20025336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 24671256 - 24671030
Alignment:
| Q |
13 |
aatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtaccttgagtacagat |
111 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
24671256 |
aatatgtatgattttccctattattatgttatggcaggatttctcaccccttattttgttgtgttgttttctgtatgattgttgtaccttgagtatagat |
24671157 |
T |
|
| Q |
112 |
actcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaataagcatgta |
211 |
Q |
| |
|
||||||||||| ||||||||| |||| ||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
24671156 |
actcaggttgacaaggagtagatgtgggacaatttagaaggtggatatgaggggataccctctatttagttatgttatttagtagttgaataagtatgta |
24671057 |
T |
|
| Q |
212 |
gtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||| |||||||| |||| |
|
|
| T |
24671056 |
gtcgctacgagctttgatattgtaaca |
24671030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 24708032 - 24707806
Alignment:
| Q |
13 |
aatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtaccttgagtacagat |
111 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
24708032 |
aatatgtatgattttccctattattatgttatggcaggatttctcaccccttattttgttgtgttgttttctgtatgattgttgtaccttgagtatagat |
24707933 |
T |
|
| Q |
112 |
actcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaataagcatgta |
211 |
Q |
| |
|
||||||||||| ||||||||| |||| ||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
24707932 |
actcaggttgacaaggagtagatgtgggacaatttagaaggtggatatgaggggataccctctatttagttatgttatttagtagttgaataagtatgta |
24707833 |
T |
|
| Q |
212 |
gtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||| |||||||| |||| |
|
|
| T |
24707832 |
gtcgctacgagctttgatattgtaaca |
24707806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 24741026 - 24740800
Alignment:
| Q |
13 |
aatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtaccttgagtacagat |
111 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
24741026 |
aatatgtatgattttccctattattatgttatggcaggatttctcaccccttattttgttgtgttgttttctgtatgattgttgtaccttgagtatagat |
24740927 |
T |
|
| Q |
112 |
actcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaataagcatgta |
211 |
Q |
| |
|
||||||||||| ||||||||| |||| ||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
24740926 |
actcaggttgacaaggagtagatgtgggacaatttagaaggtggatatgaggggataccctctatttagttatgttatttagtagttgaataagtatgta |
24740827 |
T |
|
| Q |
212 |
gtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||| |||||||| |||| |
|
|
| T |
24740826 |
gtcgctacgagctttgatattgtaaca |
24740800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 24753795 - 24753569
Alignment:
| Q |
13 |
aatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtaccttgagtacagat |
111 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
24753795 |
aatatgtatgattttccctattattatgttatggcaggatttctcaccccttattttgttgtgttgttttctgtatgattgttgtaccttgagtatagat |
24753696 |
T |
|
| Q |
112 |
actcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaataagcatgta |
211 |
Q |
| |
|
||||||||||| ||||||||| |||| ||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
24753695 |
actcaggttgacaaggagtagatgtgggacaatttagaaggtggatatgaggggataccctctatttagttatgttatttagtagttgaataagtatgta |
24753596 |
T |
|
| Q |
212 |
gtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||| |||||||| |||| |
|
|
| T |
24753595 |
gtcgctacgagctttgatattgtaaca |
24753569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 24832681 - 24832919
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcacccttta-tttgttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
24832681 |
tgatattgatttaatatgtgcgtttttccctattattatgttatggcaggatttctcaccccttactttgttgtgttgttttatgtatggtggttgtacc |
24832780 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||| | || |||| ||||||||||||| |||||||| ||||| ||||||| ||||||||||| |||| |
|
|
| T |
24832781 |
ttgagtacagatgctcaggttgacaagaagtagctatggagcgttgtagaaggtggagaggaggggataccctccatttagttctgttatttagttgttg |
24832880 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
24832881 |
gataagcatgtagtcactacgagctctgatattgtaaca |
24832919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 24562589 - 24562445
Alignment:
| Q |
94 |
tgtaccttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttag |
193 |
Q |
| |
|
||||| ||||||| |||||||||||||| | |||||||| ||| |||||||||||||||||||| || | ||||||||| ||||||||||||| ||| | |
|
|
| T |
24562589 |
tgtactttgagtagagatactcaggttgctgaggagtagcagtgggacgttttagaaggtggagacgatgagatgccctccgtttagttatgttgtttgg |
24562490 |
T |
|
| Q |
194 |
tagttgaataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
24562489 |
tagttgaatatgaatgtagtcgctacgagctctgatattgtaaca |
24562445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 24603623 - 24603479
Alignment:
| Q |
94 |
tgtaccttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttag |
193 |
Q |
| |
|
||||| ||||||| |||||||||||||| | |||||||| ||| |||||||||||||||||||| || | ||||||||| ||||||||||||| ||| | |
|
|
| T |
24603623 |
tgtactttgagtagagatactcaggttgctgaggagtagcagtgggacgttttagaaggtggagacgatgagatgccctccgtttagttatgttgtttgg |
24603524 |
T |
|
| Q |
194 |
tagttgaataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
24603523 |
tagttgaatatgaatgtagtcgctacgagctctgatattgtaaca |
24603479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 17445293 - 17445194
Alignment:
| Q |
139 |
gacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
17445293 |
gacgttttagaaggtggagatgaggggatgtcctatgtttagttttgttatttgctagttaaataagcatgtagtcgttacgagctctgatattgtaaca |
17445194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 24562655 - 24562592
Alignment:
| Q |
5 |
atttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt |
68 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
24562655 |
atttatttaatgtgcgtgcttttccctattattatgttatggcaggatttctcaccccttattt |
24562592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 24603689 - 24603626
Alignment:
| Q |
5 |
atttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt |
68 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
24603689 |
atttatttaatgtgcgtgcttttccctattattatgttatggcaggatttctcaccccttattt |
24603626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 14208925 - 14209019
Alignment:
| Q |
24 |
ttttccctattattatgttattataggatttctcaccctttatttgttgtgttgtt-ttctgtatggtggttgtaccttgagtacagatactcag |
117 |
Q |
| |
|
|||||||||||| |||| || | ||||||||||||| ||||||||||||||||| | || | |||||| ||||| ||||||||| |||||||| |
|
|
| T |
14208925 |
ttttccctattaccatgtcataactggatttctcaccccttatttgttgtgttgttatcctttgtggtggatgtactttgagtacaaatactcag |
14209019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 17014757 - 17014666
Alignment:
| Q |
21 |
tgcttttccctattattatgttattataggatttctcacccttta--tttgttgtg-ttgttttctgtatggtggttgtaccttgagtacaga |
110 |
Q |
| |
|
||||||||||||| |||||||||| || ||||||||||||||||| ||||||||| ||||| || |||||| ||||||| |||||||||| |
|
|
| T |
17014757 |
tgcttttccctatcattatgttatgat-ggatttctcaccctttatttttgttgtgtttgttccctttatggttattgtaccgtgagtacaga |
17014666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 14136603 - 14136673
Alignment:
| Q |
163 |
gggatgccctcggtttagttatgttatttagtagttgaataagcatgtagtcgctacgagctctgatattg |
233 |
Q |
| |
|
||||||||||| |||||| |||||||| || ||||||||| ||| ||||||||||||||| || ||||| |
|
|
| T |
14136603 |
gggatgccctccgtttagccctgttatttggttgttgaataatcatatagtcgctacgagctatggtattg |
14136673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 11555426 - 11555190
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcacccttta-tttgttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||| | |||||||||||||| ||| |||||||| ||||||||| |||||||| ||||| |
|
|
| T |
11555426 |
tgatatttatttaatatgcgtgtttttccctattattatgttatgacaggatttctcaccccttattttgttgttttgttttctttatggtggctgtact |
11555327 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
||||||||||||||||||||||| || |||||| | || || ||||||||| |||||||||| ||||||||||| |||||||| ||||| |||||||||| |
|
|
| T |
11555326 |
ttgagtacagatactcaggttgacaa-gagtagctatgagatgttttagaaagtggagatgacgggatgccctccgtttagttctgtta-ttagtagttg |
11555229 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
11555228 |
aataagcatgtagtcgatacgagctctgatattgtaaca |
11555190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 12228437 - 12228203
Alignment:
| Q |
4 |
tatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtaccttg |
102 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||| |||||| || ||||||||||||||||||| | ||||||||| |
|
|
| T |
12228437 |
tatttatttaacatgcgtgcttttccctattattatgttatgtcaggatttatcaccccttattttgtcgtgttgttttctgtatggttgatgtaccttg |
12228338 |
T |
|
| Q |
103 |
agtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaat |
202 |
Q |
| |
|
||||||||| |||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
12228337 |
agtacagatgtccaggttgacaagcagtagctatgagacgttttagaaggtggagatgaggggatgccctccgtttagttctgtta-ttagtagttgaat |
12228239 |
T |
|
| Q |
203 |
aagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||| |
|
|
| T |
12228238 |
aagcatgtagtcactacgagctctgatattgtaaca |
12228203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 16285739 - 16285975
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||||||| || ||||||||||| ||||||||| ||||||||||||||| || ||| ||||||||||||| |||||||| |||||| |
|
|
| T |
16285739 |
tgatatttatttaatatgcgtgtttttccctattcttatgttatggtaggatttctcaccccttgttttgttgtgttgttttacatatggtggatgtacc |
16285838 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||| |||||||||||||||| |||||||| | || || |||||||||||||||||||||| ||||||||| | |||||| ||||| |||||| ||| |
|
|
| T |
16285839 |
ttgagtgcagatactcaggttgacaaggagtaactatgggatgttttagaaggtggagatgaggagatgccctctg-ttagttctgtta-ttagtaattg |
16285936 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16285937 |
aataagcatgtagtcgctacgagctctgatattgtaaca |
16285975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 238
Target Start/End: Original strand, 20874319 - 20874553
Alignment:
| Q |
5 |
atttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttat-ttgttgtgttgttttctgtatggtggttgtaccttga |
103 |
Q |
| |
|
||||||||||| ||| || |||| ||||||||||||| || |||||||||||| |||||| |||||||||||||||||||||||||||||| | || | |
|
|
| T |
20874319 |
atttatttaatgtgcgtgttttttcctattattatgtcatggcaggatttctcacgctttatattgttgtgttgttttctgtatggtggttgttctttaa |
20874418 |
T |
|
| Q |
104 |
gtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaata |
203 |
Q |
| |
|
||||| ||||||||||| | |||||||||||||||| ||||||||||||| || |||||||||||||| |||||||| |||||||| || | |||||| |
|
|
| T |
20874419 |
gtacacatactcaggttaactaggagtagttgtgtgatattttagaaggtggggacgaggggatgccctccgtttagttctgttatttggttgatgaata |
20874518 |
T |
|
| Q |
204 |
agcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|| || |||||||||||||||||||||||| |||| |
|
|
| T |
20874519 |
agaatttagtcgctacgagctctgatattgtaaca |
20874553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 17335120 - 17334889
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||| || ||||||| |||||||||||||||| |||||||| ||||| |||||| | |||||||||||| |||||||| ||||| |
|
|
| T |
17335120 |
tgatatttatttaat-tgtgtgctttttcctattattatgttatggaaggatttcccaccccttattttgctgtgttgttttccgtatggtgactgtact |
17335022 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|| ||||||||| |||||||| | |||||||||| || ||| ||||||||| ||||||||||||||||||||| |||||| ||| || ||||||| |
|
|
| T |
17335021 |
ttaagtacagatgctcaggttaacgaggagtagttatgggacattttagaagttggagatgaggggatgccctccagttagtttggttgcttggtagttg |
17334922 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatatt |
232 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
17334921 |
aataagcatgtagtcgctatgagctctgatatt |
17334889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 9563810 - 9563706
Alignment:
| Q |
3 |
atatttatttaatatgcatgcttttccctattattatgttattataggatttctcacccttta-tttgttgtgttgttttctgtatggtggttgtacctt |
101 |
Q |
| |
|
|||| |||||| | |||||| ||||| |||||||||||||| |||||||||||||| ||| ||| || |||||||| || ||||||| |||||| || |
|
|
| T |
9563810 |
atatgtatttattgtgcatgtgtttccatattattatgttatggcaggatttctcaccccttattttattttgttgtttcctttatggtgattgtacttt |
9563711 |
T |
|
| Q |
102 |
gagta |
106 |
Q |
| |
|
||||| |
|
|
| T |
9563710 |
gagta |
9563706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 34636271 - 34636321
Alignment:
| Q |
188 |
atttagtagttgaataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||| ||||||||| ||||||||| ||||||||||||| ||| |||| |
|
|
| T |
34636271 |
atttagtaattgaataagaatgtagtcgttacgagctctgattttgtaaca |
34636321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 23661515 - 23661752
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||| |||| | |
|
|
| T |
23661515 |
tgatatttatttaatatgcgttcttttccctattattatgttatggcaggatttctcaccccttattttgttgtgttgttttatgtatggtggatgtaac |
23661614 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||| | || ||||||||| ||||||||||||||| ||||||||| ||||||| |||| |||| ||||| |
|
|
| T |
23661615 |
ttcagtacagatactcaggttgacaaggagtagatatgggacgttttataaggtggagatgaggagatgccctctgtttagtccagtta-ttagcagttg |
23661713 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
23661714 |
aataagcatgtagtcgctacgagctctgatattgtaaca |
23661752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 24786131 - 24785893
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
|||||||||||| ||||| || ||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||| ||||||||| |||||| |
|
|
| T |
24786131 |
tgatatttatttgatatgtgtgtttttcccaattattatgttatggcaggatttctcacctcttattttgttgtgttgttttatgtatggtgactgtacc |
24786032 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||| || |
|
|
| T |
24786031 |
ttgagtacagatactcaggttgacaaggagtagctatgggacgttttagaaggtggagatcaggggatgtcctctgtttagttatgttatttaatagatg |
24785932 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||| |||| |
|
|
| T |
24785931 |
aataagcatgtagttgctacgagctccgatattgtaaca |
24785893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 44587105 - 44587343
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||| |||||||||||| || |||||||||||||| |||||| ||||||| |||||| |||||| |||||||| | || ||||||||||||||||| |
|
|
| T |
44587105 |
tgataattatttaatatgtgtgtttttccctattattttgttatggcaggatttatcaccccttattttgttgtgttatattatgtatggtggttgtacc |
44587204 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
||||||||||||||||||||| | ||||||||| | || ||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||| |
|
|
| T |
44587205 |
ttgagtacagatactcaggttaacaaggagtagctatgggacgttttagaaggtggagatgaggagatgccctccgtttagttctgttaattagtagttg |
44587304 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||| || ||||||||||||||||||||||||| |||| |
|
|
| T |
44587305 |
aataaacaagtagtcgctacgagctctgatattgtaaca |
44587343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 21246376 - 21246241
Alignment:
| Q |
21 |
tgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtaccttgagtacagatactcaggt |
119 |
Q |
| |
|
||||||||| || || |||||||| |||||||||||||| || ||| ||||||||||||| |||||||||||||||| |||||| |||| |||||||| |
|
|
| T |
21246376 |
tgcttttccttaatactatgttatagcaggatttctcaccccttcttttgttgtgttgttttatgtatggtggttgtactttgagtgcagacactcaggt |
21246277 |
T |
|
| Q |
120 |
tgataaggagtagttgtgtgacgttttagaaggtgga |
156 |
Q |
| |
|
||| |||||||| |||| | || ||||||||||||| |
|
|
| T |
21246276 |
tgacgaggagtagctgtggggcg-tttagaaggtgga |
21246241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 27470831 - 27470983
Alignment:
| Q |
7 |
ttatttaatatgcatgcttttccctattattatgttattataggatttctcacc-ctttatttgttgtgttgttttc-tgtatggtggttgtaccttgag |
104 |
Q |
| |
|
|||| |||||||| ||||||||| |||| ||||||||| ||||||||||||| ||||||||||| |||||||||| | | |||||| |||||||||| |
|
|
| T |
27470831 |
ttatctaatatgcgtgcttttccttatttttatgttatggcaggatttctcacctctttatttgttatgttgttttcttttgtggtggcggtaccttgag |
27470930 |
T |
|
| Q |
105 |
tacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggaga |
158 |
Q |
| |
|
|| ||| ||||||||| | |||||||| ||| |||| ||||||||||||||| |
|
|
| T |
27470931 |
tagagacactcaggttcacgaggagtagccgtgggacg-tttagaaggtggaga |
27470983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 13361263 - 13361209
Alignment:
| Q |
4 |
tatttatttaatatgcatgcttttccctattattatgttattataggatttctcacc |
60 |
Q |
| |
|
|||||||| ||||||| || ||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
13361263 |
tatttattaaatatgcgtgtttt--cctattattatgttattttaggatttctcacc |
13361209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 18787858 - 18787910
Alignment:
| Q |
186 |
ttatttagtagttgaataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||||||||| |||||||||| || ||||| |||| ||| |||| |
|
|
| T |
18787858 |
ttatttagtagttgaataaacatgtagtcgatatgagctttgattttgtaaca |
18787910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 51659373 - 51659610
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| |||| ||||||| |
|
|
| T |
51659373 |
tgatatttatttaatgtgcatgtttttccctattattatgttatggcaggatttctcaccccttattttgttgtgttgttttctgtacggtgattgtacc |
51659472 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
||||||||| ||||| || || | ||||||||| |||| ||||||||||| | ||||||||| ||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
51659473 |
ttgagtacatatacttagattaacaaggagtagctgtgggacgttttagaggatggagatgatgggatgccctccgtttagttctgttatttagtagttg |
51659572 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
51659573 |
aataag-ttgtagtcgctacgagctctgatattgtaaca |
51659610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 1567400 - 1567635
Alignment:
| Q |
3 |
atatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacctt |
101 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| |||||||| ||||| || |
|
|
| T |
1567400 |
atatttatttaatgtgcatgtgtttccctattattatgttatagcaggatttctcaccccttattttgttgtgttgttttccgtatggtgtctgtacttt |
1567499 |
T |
|
| Q |
102 |
gagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaa |
201 |
Q |
| |
|
||||||| |||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| | || ||||| | || ||||| ||||||| | |
|
|
| T |
1567500 |
gagtacaaatactcaggttgatgagcagtagttgtgggacgttttagaaggtggaaatgaggggatgtcatctctttag-tctgatatttggtagttgga |
1567598 |
T |
|
| Q |
202 |
taagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
1567599 |
taagcatgtagtcgctacgagctccgatattgtaaca |
1567635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13882986 - 13883066
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctatta-ttatgttattataggatttctcaccctttatttgttgtgttgttt |
80 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||| || | |||| |||||||||||||||| | ||||||||||||| |
|
|
| T |
13882986 |
tgatatttatttaatgtgcatgtttttccctattatttttattatggtaggatttctcaccctgattatgttgtgttgttt |
13883066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 17782383 - 17782184
Alignment:
| Q |
24 |
ttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtaccttgagtacagatactcaggttga |
122 |
Q |
| |
|
||||||||||||||| ||||| |||| ||||||||| |||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
17782383 |
ttttccctattattaagttatggcaggagttctcaccccttattttgttgtgttgttttatgtatgatggatgtaccttgagtacagatactcaggttga |
17782284 |
T |
|
| Q |
123 |
taaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaataagcatgtagtcgctacgag |
222 |
Q |
| |
|
||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
17782283 |
caaggagtagctatgggacgttttagaaggtggagatgaggggatgccctcggtttagttctgttatttagtagttgaataagcatgtagtcgcgacgag |
17782184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 19091010 - 19090811
Alignment:
| Q |
24 |
ttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtaccttgagtacagatactcaggttga |
122 |
Q |
| |
|
||||||||||||||| ||||| |||| ||||||||| |||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
19091010 |
ttttccctattattaagttatggcaggagttctcaccccttattttgttgtgttgttttatgtatgatggatgtaccttgagtacagatactcaggttga |
19090911 |
T |
|
| Q |
123 |
taaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaataagcatgtagtcgctacgag |
222 |
Q |
| |
|
||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19090910 |
caaggagtagctatgggacgttttagaaggtggagatgaggggatgccctcggtttagttctgttatttagtagttgaataagcatgtagtcgcgacgag |
19090811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 14482268 - 14482506
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcacccttta-tttgttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||| ||||| | || ||||||||||| ||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
14482268 |
tgatatttatttaatatgtgtgtttttccctattattacgttatgacagaatttctcaccccttactttgttgtgttgttttatgtatggtggttgtacc |
14482367 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||| || ||||||| |||||||||| |||||||||||||| |||||||| ||||||||||| |||| |
|
|
| T |
14482368 |
ttgagtacagatgctcaggttgacaagaagtagcaatgggacgtttaagaaggtggatgggaggggatgccctccgtttagttctgttatttagttgttg |
14482467 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
14482468 |
aataagcatgtagtcactacgagctctgatattgtaaca |
14482506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 4713516 - 4713753
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||||| | |||||||||||| |||||| ||||||||||||||| || |||| |||||| |
|
|
| T |
4713516 |
tgatatttatttaatgtgcatgcttttccctattattttgttatggcatgatttctcaccccttattttgttgtgttgttttctatacggtgactgtacc |
4713615 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||| || |||||||| | ||||||||| ||||||||||| |||| ||| ||||||||||||||| |
|
|
| T |
4713616 |
ttgagtacagatactcaggttgacaaggagtagctgtgggatgttttagaggatggagatgatgggatgccctccgtttggtttggttatttagtagttg |
4713715 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| |||| |
|
|
| T |
4713716 |
aataag-ttgtagtcactacgagctctgatattgtaaca |
4713753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 14055747 - 14055981
Alignment:
| Q |
4 |
tatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtaccttg |
102 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||| |||| ||||||||| |
|
|
| T |
14055747 |
tatttatttaatgtgcatgcttttccatattattatgttattgctggatttctcaccccttattttgttgtgttgttttatgtacggtgactgtaccttg |
14055846 |
T |
|
| Q |
103 |
agtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttgaat |
202 |
Q |
| |
|
|||| ||||||||| |||| ||| ||||| |||| ||||||||||| | ||||||||| ||||||||||| || ||||| ||||||||||||||||||| |
|
|
| T |
14055847 |
agtatagatactcatcttgacaagtagtagctgtgggacgttttagaggatggagatgatgggatgccctctgtctagttctgttatttagtagttgaat |
14055946 |
T |
|
| Q |
203 |
aagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||| |||||||| |||||| |||||||||| |||| |
|
|
| T |
14055947 |
aag-ttgtagtcggtacgaggtctgatattgtaaca |
14055981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 13927688 - 13927926
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||| ||||| ||| || ||||||||||||||||||||| | | |||||||||||| |||||| ||| |||||||||| |||||||| | ||| |
|
|
| T |
13927688 |
tgatatttaattaatgtgcgtgtttttccctattattatgttatgacaagatttctcaccccttattttgttatgttgttttccgtatggtgactttact |
13927787 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| |||| |||||||||| |||||| | |||| |||||| ||| |||||||| | ||||| ||||||| |
|
|
| T |
13927788 |
ttgagtacagatacccaggttgatgaggagtagctgtgggacgttttagtaggtggtggtgagtggatgctctccgtttagttctattattcggtagttg |
13927887 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||| |||| |
|
|
| T |
13927888 |
aataagaatgtagtcgctacgagctctgacattgtaaca |
13927926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 13929426 - 13929662
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcacccttta-tttgttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||| ||||| ||| || ||||||||||||||||||||| |||||||||||||||| ||| |||||| ||||||||| | ||||||||||||| |
|
|
| T |
13929426 |
tgatatttaattaatgtgcttgtttttccctattattatgttatgataggatttctcaccccttattttgttatgttgtttttcgaatggtggttgtact |
13929525 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| |||| ||||||||| |||||| | |||| |||||| ||| |||||||| | ||||| ||||||| |
|
|
| T |
13929526 |
ttgagtacagatacccaggttga-cgggagtagctgtgggacgttttaacaggtggtggtgagaggatgctctccgtttagttctattattcggtagttg |
13929624 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
13929625 |
aataagcatgtag-cgctacgagctctgatattgtaaca |
13929662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14063143 - 14063248
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcacccttta-tttgttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||||||| |||| |||| |||| |||||| |
|
|
| T |
14063143 |
tgatatttatttaatgtgcatgtttttccctattattatgttatggcaggatttctcaccccttattttgttgtgtttttttttgtacggtgactgtacc |
14063242 |
T |
|
| Q |
100 |
ttgagt |
105 |
Q |
| |
|
|||||| |
|
|
| T |
14063243 |
ttgagt |
14063248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 16613902 - 16613825
Alignment:
| Q |
4 |
tatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttatt-tgttgtgttgttt |
80 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| | |||| |||||||||||||| | ||| ||||||||||||| |
|
|
| T |
16613902 |
tatttatttaatgtgcatgcttttccctattattttattatggcaggatttctcacccctgattatgttgtgttgttt |
16613825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 22045351 - 22045428
Alignment:
| Q |
4 |
tatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttatt-tgttgtgttgttt |
80 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| | |||| |||||||||||||| | ||| ||||||||||||| |
|
|
| T |
22045351 |
tatttatttaatgtgcatgcttttccctattattttattatggcaggatttctcacccctgattatgttgtgttgttt |
22045428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 13777 - 13540
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||||||||||||||| | |||| ||||||| |
|
|
| T |
13777 |
tgatatttatttaatgtgcatgcttttccctattattttgttatggcaggatttcttaccctttattttgttgtgttgttttctgaacggtgattgtacc |
13678 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||| |||||||| || |||| ||| | || ||||||||||| |
|
|
| T |
13677 |
ctgagtacagatactcaggttgacaaggagtagttgtgggacgttttagaggatggagatgatgggatgccttccgtttggtttttttgtttagtagttg |
13578 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
13577 |
aataag-ttgtagtcgctacgagctctgatattgtaaca |
13540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0145 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0145
Description:
Target: scaffold0145; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 11977 - 11741
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||||||| || ||||||||||| ||||||||| ||||||||||||||| || ||| ||||||||||||| |||||||| |||||| |
|
|
| T |
11977 |
tgatatttatttaatatgcgtgtttttccctattcttatgttatggtaggatttctcaccccttgttttgttgtgttgttttacatatggtggatgtacc |
11878 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||| |||||||||||||||| |||||||| | || || |||||||||||||||||||||| ||||||||| | |||||| ||||| |||||| ||| |
|
|
| T |
11877 |
ttgagtgcagatactcaggttgacaaggagtaactatgggatgttttagaaggtggagatgaggagatgccctctg-ttagttctgtta-ttagtaattg |
11780 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
11779 |
aataagcatgtagtcgctacgagctctgatattgtaaca |
11741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 130188 - 129956
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||| |||| |||||| |
|
|
| T |
130188 |
tgatatttatttaatgtgcatgctttttcctattattttgttatggcaggatttctcaccccttattttgttgtgttgttttctgtacggtgactgtacc |
130089 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||| ||||||||||| | || |||||| |||||||||| |||| ||| |||||||||||||||| |
|
|
| T |
130088 |
ctgagtacagatactcaggttgacaaggagtagctgtgggacgttttagaggatgaagatgattggatgccctccgtttggttttgttatttagtagttg |
129989 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattg |
233 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| |
|
|
| T |
129988 |
aataag-ttgcagtcgctacgagctctgatattg |
129956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 28976 - 29212
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttattt-gttgtgttgttttctgtatggtggttgtacc |
99 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||| | || |||||| |
|
|
| T |
28976 |
tgatatttatttaatgtgcatgcttttccctattattttgttatggtaggatttctcaccccttattttgttgtgttgttttctgtacgatgactgtacc |
29075 |
T |
|
| Q |
100 |
ttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgaggggatgccctcggtttagttatgttatttagtagttg |
199 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||| ||||||||||| | ||||||||| ||||||||||| |||| ||| ||||||| ||||||| |
|
|
| T |
29076 |
ctgagtacagatactcaggttgacaaggagtagctgtgggacgttttagaggatggagatgatgggatgccctccgtttggttttgttattaagtagtta |
29175 |
T |
|
| Q |
200 |
aataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||||| |||| |
|
|
| T |
29176 |
aataag-ttgtagtcgatacgagctc-gatattgtaaca |
29212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0725 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0725
Description:
Target: scaffold0725; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 238
Target Start/End: Complemental strand, 5420 - 5248
Alignment:
| Q |
66 |
tttgttgtgttgttttctgtatggtggttgtaccttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgagggg |
165 |
Q |
| |
|
||||||||||| ||||| ||||||| | ||||| ||||||||||||||| ||||||| |||||||| | | ||||||||| ||||| ||||||||||| |
|
|
| T |
5420 |
tttgttgtgttattttccgtatggtcgctgtactttgagtacagatacttaggttgacgaggagtagctttaggacgttttacaaggttgagatgagggg |
5321 |
T |
|
| Q |
166 |
atgccctcggtttagttatgttatttagtagttgaataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|| ||| | |||||| | ||||||||| ||||||||| |||||||| |||||| || |||||||| |||| |
|
|
| T |
5320 |
attgcctttgcttagttccgatatttagtacttgaataagaatgtagtctctacgatctttgatattgaaaca |
5248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0601 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0601
Description:
Target: scaffold0601; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 5574 - 5706
Alignment:
| Q |
24 |
ttttccctattattatgttattataggatttctcacccttta-tttgttgtgttgttttctgtatggtggttgtaccttgagtacagatactcaggttga |
122 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| | |||||||||||||| | || | ||| ||||||||||| |
|
|
| T |
5574 |
ttttccctattattatgttatagcaggatttctcaccccttaatttgttgtgttgttttatatatggtggttgtactattagcatagacactcaggttga |
5673 |
T |
|
| Q |
123 |
taaggagtagttgtgtgacgttttagaaggtgga |
156 |
Q |
| |
|
||||||||||||| |||| ||||||||||||| |
|
|
| T |
5674 |
cgaggagtagttgtgggacg-tttagaaggtgga |
5706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0216 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0216
Description:
Target: scaffold0216; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 238
Target Start/End: Original strand, 24995 - 25167
Alignment:
| Q |
66 |
tttgttgtgttgttttctgtatggtggttgtaccttgagtacagatactcaggttgataaggagtagttgtgtgacgttttagaaggtggagatgagggg |
165 |
Q |
| |
|
||||||||||| ||||| ||||| | | ||||| |||| |||||||||| |||||| ||| |||| | | ||||||||| ||||| |||||||| || |
|
|
| T |
24995 |
tttgttgtgttattttccgtatgatcgctgtactttgaatacagatacttaggttggcgaggtgtagctttaggacgttttacaaggttgagatgagagg |
25094 |
T |
|
| Q |
166 |
atgccctcggtttagttatgttatttagtagttgaataagcatgtagtcgctacgagctctgatattgcaaca |
238 |
Q |
| |
|
|| |||| | |||||| | ||||||||| ||||||||| |||||||| |||||| || |||||||| |||| |
|
|
| T |
25095 |
attgcctctgcttagttccgatatttagtacttgaataagaatgtagtctctacgatctttgatattgaaaca |
25167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 69777 - 69633
Alignment:
| Q |
7 |
ttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttatttgttgtgttgttttctgtatggtggttgtaccttgagta |
106 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||| || |||| ||||| |||||| | ||||||| |||||||||||||||| ||||||| |
|
|
| T |
69777 |
ttatttaatgtgtctgcttttccctattattatgttatagaagtattttacaccccttattt----tattgttttatgtatggtggttgtactttgagta |
69682 |
T |
|
| Q |
107 |
cagatactcaggttgataaggagtagttgtgtgacgttttagaaggtgga |
156 |
Q |
| |
|
|||| ||||| ||| | |||||||| ||| |||| ||||||||||||| |
|
|
| T |
69681 |
cagacactcaagttaacgaggagtagccgtgggacg-tttagaaggtgga |
69633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0239 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0239
Description:
Target: scaffold0239; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21858 - 21938
Alignment:
| Q |
1 |
tgatatttatttaatatgcatgcttttccctattattatgttattataggatttctcaccctttatt-tgttgtgttgttt |
80 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||| | |||| |||||||||||||| | ||| ||||||||||||| |
|
|
| T |
21858 |
tgatatgtatttaatgtgcatgcttttccctattatttttttatggcaggatttctcacccctgattatgttgtgttgttt |
21938 |
T |
|
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