View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11430_high_27 (Length: 213)
Name: NF11430_high_27
Description: NF11430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11430_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 27770237 - 27770395
Alignment:
| Q |
25 |
acctaattaacaagattttattttctttggtttcaactcaatcaaaacatgaacggtctgaatcat---attaattaataaccgagtaatgttgtagaca |
121 |
Q |
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| T |
27770237 |
acctaattaacaagattttattttgtttggtttcaactcaatcaaaacaagaacggtctgaatcatctgattaattaataaccgagaaatgttgtagaca |
27770336 |
T |
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| Q |
122 |
aggatcatcttccttaatagtaggaaagacacatatgtttctttctacatctctgatctcc |
182 |
Q |
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| T |
27770337 |
aggatcatcttccttaatagtaggaaagacacata--tttctttttacatctctgatctcc |
27770395 |
T |
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