View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11430_low_26 (Length: 232)

Name: NF11430_low_26
Description: NF11430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11430_low_26
NF11430_low_26
[»] chr7 (28 HSPs)
chr7 (1-162)||(20337380-20337544)
chr7 (2-115)||(1471178-1471292)
chr7 (13-120)||(1284495-1284602)
chr7 (2-116)||(35627907-35628021)
chr7 (51-116)||(12645797-12645861)
chr7 (53-118)||(22817060-22817125)
chr7 (1-116)||(7817705-7817820)
chr7 (2-115)||(38939865-38939980)
chr7 (2-115)||(6253253-6253367)
chr7 (56-118)||(32351542-32351604)
chr7 (2-111)||(40417844-40417953)
chr7 (53-118)||(38656657-38656722)
chr7 (69-117)||(25200200-25200248)
chr7 (1-41)||(31274502-31274542)
chr7 (51-115)||(35600791-35600855)
chr7 (4-111)||(10700078-10700184)
chr7 (51-118)||(11352859-11352925)
chr7 (51-118)||(23034391-23034457)
chr7 (51-122)||(47356103-47356174)
chr7 (51-117)||(46022153-46022219)
chr7 (2-32)||(47495040-47495070)
chr7 (51-120)||(39497184-39497253)
chr7 (1-41)||(3683601-3683641)
chr7 (2-70)||(18856540-18856608)
chr7 (63-111)||(39110994-39111042)
chr7 (51-111)||(42553017-42553077)
chr7 (51-111)||(46725725-46725785)
chr7 (2-34)||(46812874-46812906)
[»] chr4 (44 HSPs)
chr4 (3-118)||(27371212-27371327)
chr4 (13-120)||(6520716-6520823)
chr4 (2-107)||(24990185-24990290)
chr4 (4-116)||(50831642-50831754)
chr4 (1-116)||(336694-336809)
chr4 (1-118)||(32696673-32696791)
chr4 (2-115)||(43769781-43769894)
chr4 (51-116)||(19174661-19174726)
chr4 (13-117)||(39654905-39655009)
chr4 (51-118)||(1627440-1627510)
chr4 (3-118)||(12595515-12595630)
chr4 (51-117)||(34616680-34616746)
chr4 (53-115)||(42815526-42815588)
chr4 (51-120)||(515528-515597)
chr4 (9-118)||(18767937-18768046)
chr4 (6-126)||(47744389-47744509)
chr4 (2-111)||(52430948-52431057)
chr4 (2-106)||(28417548-28417652)
chr4 (2-105)||(49896564-49896667)
chr4 (53-117)||(53796777-53796841)
chr4 (81-116)||(12375864-12375899)
chr4 (51-118)||(17683461-17683527)
chr4 (54-120)||(33423461-33423527)
chr4 (51-118)||(35936085-35936152)
chr4 (51-117)||(24509273-24509339)
chr4 (54-112)||(26148093-26148151)
chr4 (51-117)||(38382440-38382506)
chr4 (51-109)||(45143567-45143624)
chr4 (51-109)||(45152336-45152393)
chr4 (51-117)||(47181960-47182026)
chr4 (51-117)||(48402083-48402149)
chr4 (1-111)||(50889965-50890075)
chr4 (54-111)||(1797713-1797770)
chr4 (53-118)||(3078792-3078857)
chr4 (1-70)||(10474045-10474114)
chr4 (51-112)||(14603576-14603637)
chr4 (80-113)||(17367215-17367248)
chr4 (51-116)||(22819769-22819833)
chr4 (51-108)||(23662211-23662268)
chr4 (51-116)||(33093003-33093068)
chr4 (51-120)||(42491193-42491262)
chr4 (51-111)||(46038782-46038840)
chr4 (2-114)||(14113502-14113614)
chr4 (76-120)||(52895401-52895445)
[»] chr5 (19 HSPs)
chr5 (1-115)||(27546133-27546249)
chr5 (51-117)||(24405841-24405907)
chr5 (2-115)||(6940037-6940151)
chr5 (3-116)||(34546487-34546600)
chr5 (2-110)||(15952938-15953046)
chr5 (2-117)||(9939317-9939433)
chr5 (53-117)||(18695440-18695504)
chr5 (2-117)||(41175592-41175707)
chr5 (52-108)||(1293013-1293069)
chr5 (13-116)||(17154421-17154524)
chr5 (51-118)||(10649555-10649621)
chr5 (51-118)||(33655298-33655365)
chr5 (2-115)||(8675321-8675434)
chr5 (51-117)||(17626105-17626171)
chr5 (51-116)||(19839873-19839937)
chr5 (15-115)||(36321684-36321785)
chr5 (1-110)||(42267415-42267523)
chr5 (51-116)||(43441858-43441922)
chr5 (51-119)||(21353263-21353331)
[»] chr2 (37 HSPs)
chr2 (2-111)||(44977391-44977500)
chr2 (51-111)||(20532354-20532414)
chr2 (51-118)||(44050134-44050201)
chr2 (2-116)||(1907650-1907764)
chr2 (2-115)||(34134658-34134772)
chr2 (51-115)||(3412442-3412506)
chr2 (2-112)||(16199603-16199713)
chr2 (1-118)||(31296607-31296724)
chr2 (58-118)||(5054057-5054117)
chr2 (51-115)||(9521927-9521991)
chr2 (51-115)||(14255422-14255486)
chr2 (51-118)||(23352792-23352858)
chr2 (51-110)||(44254721-44254779)
chr2 (2-111)||(39147836-39147945)
chr2 (51-119)||(1863775-1863841)
chr2 (51-115)||(32344616-32344680)
chr2 (54-118)||(36436690-36436753)
chr2 (51-123)||(37105758-37105828)
chr2 (2-110)||(42430720-42430828)
chr2 (63-118)||(3012737-3012792)
chr2 (4-111)||(7258453-7258560)
chr2 (54-121)||(13765523-13765589)
chr2 (3-41)||(2130505-2130543)
chr2 (51-117)||(3097747-3097813)
chr2 (51-117)||(13333056-13333122)
chr2 (51-116)||(5032043-5032108)
chr2 (1-70)||(7663999-7664068)
chr2 (2-111)||(10216920-10217029)
chr2 (51-112)||(14890979-14891040)
chr2 (75-120)||(30220688-30220733)
chr2 (54-111)||(30339756-30339813)
chr2 (51-112)||(36625207-36625268)
chr2 (51-116)||(43520977-43521042)
chr2 (51-111)||(28494979-28495039)
chr2 (2-105)||(29879553-29879656)
chr2 (51-115)||(36643972-36644035)
chr2 (51-111)||(41056639-41056699)
[»] chr1 (36 HSPs)
chr1 (53-114)||(31433611-31433672)
chr1 (2-120)||(44517844-44517962)
chr1 (1-117)||(1820992-1821105)
chr1 (2-116)||(50775043-50775157)
chr1 (51-114)||(29706592-29706655)
chr1 (2-116)||(50824811-50824925)
chr1 (2-115)||(46281506-46281620)
chr1 (51-116)||(11597756-11597821)
chr1 (51-116)||(27357613-27357678)
chr1 (2-118)||(51436655-51436772)
chr1 (54-117)||(37610671-37610734)
chr1 (51-117)||(6949866-6949932)
chr1 (2-110)||(33358051-33358159)
chr1 (2-111)||(51571238-51571347)
chr1 (51-115)||(10889934-10889997)
chr1 (51-115)||(13489782-13489845)
chr1 (51-111)||(31975110-31975169)
chr1 (3-82)||(40699757-40699837)
chr1 (77-112)||(4862311-4862346)
chr1 (2-41)||(18512305-18512344)
chr1 (51-118)||(29154898-29154964)
chr1 (51-114)||(32158685-32158748)
chr1 (2-119)||(18434865-18434982)
chr1 (72-114)||(41451768-41451810)
chr1 (2-115)||(47721479-47721592)
chr1 (2-115)||(47728471-47728584)
chr1 (51-111)||(12127983-12128044)
chr1 (2-78)||(14442330-14442407)
chr1 (74-115)||(32266228-32266269)
chr1 (3-40)||(42468664-42468701)
chr1 (51-116)||(50328028-50328092)
chr1 (2-34)||(8447806-8447838)
chr1 (57-109)||(16063512-16063564)
chr1 (51-111)||(19947636-19947696)
chr1 (1-61)||(49559142-49559202)
chr1 (54-114)||(50239053-50239113)
[»] chr8 (25 HSPs)
chr8 (53-117)||(24795370-24795434)
chr8 (2-115)||(10644689-10644803)
chr8 (2-118)||(6445247-6445366)
chr8 (2-118)||(37754632-37754748)
chr8 (2-110)||(14707236-14707344)
chr8 (1-117)||(36885374-36885490)
chr8 (2-110)||(7472920-7473027)
chr8 (2-118)||(40517328-40517444)
chr8 (51-109)||(6182347-6182405)
chr8 (2-115)||(30439394-30439507)
chr8 (68-113)||(2621917-2621962)
chr8 (1-118)||(13106549-13106666)
chr8 (51-116)||(36969561-36969626)
chr8 (13-126)||(39856119-39856232)
chr8 (1-41)||(37942868-37942908)
chr8 (2-117)||(39211112-39211227)
chr8 (2-116)||(22960305-22960420)
chr8 (54-117)||(25018490-25018553)
chr8 (51-109)||(144150-144208)
chr8 (2-111)||(36816508-36816617)
chr8 (2-111)||(12734903-12735012)
chr8 (51-112)||(39465614-39465675)
chr8 (51-111)||(2455165-2455225)
chr8 (73-117)||(14863264-14863308)
chr8 (59-115)||(22811405-22811461)
[»] chr6 (23 HSPs)
chr6 (54-106)||(34084526-34084578)
chr6 (4-117)||(31883189-31883302)
chr6 (51-125)||(25127708-25127782)
chr6 (2-119)||(26595419-26595536)
chr6 (2-110)||(31749435-31749543)
chr6 (51-111)||(3552047-3552107)
chr6 (51-111)||(30945933-30945993)
chr6 (51-115)||(30956191-30956255)
chr6 (2-111)||(17551271-17551379)
chr6 (51-116)||(33019039-33019104)
chr6 (51-115)||(3832583-3832646)
chr6 (3-116)||(33656838-33656955)
chr6 (51-117)||(4820486-4820552)
chr6 (2-115)||(13143270-13143383)
chr6 (51-117)||(16199569-16199635)
chr6 (51-109)||(30621859-30621917)
chr6 (51-120)||(10826622-10826691)
chr6 (51-116)||(18141188-18141252)
chr6 (4-109)||(33195213-33195318)
chr6 (51-111)||(2159197-2159257)
chr6 (51-119)||(6531064-6531131)
chr6 (51-111)||(29639203-29639263)
chr6 (51-111)||(29642933-29642993)
[»] chr3 (44 HSPs)
chr3 (2-118)||(6178310-6178426)
chr3 (2-117)||(37056943-37057058)
chr3 (51-116)||(52564536-52564601)
chr3 (15-116)||(54007545-54007646)
chr3 (51-111)||(34627773-34627833)
chr3 (51-119)||(46965984-46966052)
chr3 (58-109)||(11075270-11075321)
chr3 (2-117)||(33256380-33256494)
chr3 (2-116)||(55361120-55361234)
chr3 (51-125)||(819091-819165)
chr3 (58-111)||(11056825-11056878)
chr3 (51-112)||(27511844-27511904)
chr3 (2-111)||(50559104-50559212)
chr3 (51-119)||(46965893-46965961)
chr3 (1-111)||(12762581-12762691)
chr3 (2-115)||(27718673-27718787)
chr3 (53-115)||(29030694-29030756)
chr3 (1-116)||(9158759-9158875)
chr3 (2-118)||(29573240-29573357)
chr3 (2-111)||(38523237-38523346)
chr3 (1-117)||(48176735-48176852)
chr3 (2-118)||(51465799-51465915)
chr3 (2-110)||(6093771-6093879)
chr3 (51-107)||(26645146-26645201)
chr3 (2-117)||(9311111-9311226)
chr3 (2-41)||(39629800-39629839)
chr3 (51-110)||(39697115-39697173)
chr3 (58-117)||(45205403-45205462)
chr3 (63-117)||(6999301-6999355)
chr3 (57-111)||(9719340-9719394)
chr3 (51-117)||(21217631-21217697)
chr3 (1-70)||(1436886-1436955)
chr3 (51-120)||(13348017-13348086)
chr3 (2-118)||(36121891-36122007)
chr3 (51-115)||(36412243-36412307)
chr3 (51-111)||(45754758-45754819)
chr3 (2-119)||(46815741-46815857)
chr3 (3-43)||(19150279-19150319)
chr3 (51-111)||(23155330-23155390)
chr3 (51-111)||(23592577-23592637)
chr3 (51-111)||(23600712-23600772)
chr3 (2-117)||(35376967-35377082)
chr3 (51-111)||(42889104-42889164)
chr3 (51-115)||(46965806-46965870)
[»] scaffold0141 (1 HSPs)
scaffold0141 (51-117)||(12052-12117)
[»] scaffold0095 (1 HSPs)
scaffold0095 (51-112)||(22826-22887)
[»] scaffold0005 (1 HSPs)
scaffold0005 (51-112)||(213741-213802)
[»] scaffold0002 (1 HSPs)
scaffold0002 (58-119)||(469520-469581)
[»] scaffold0026 (1 HSPs)
scaffold0026 (122-154)||(101731-101763)


Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20337380 - 20337544
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20337380 atttttactttatctttctattgttttaatttttatgtcaacactcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 20337479  T
Q  101 caaataacacacctcttt---aagaaaaagtagaaaaagaaaagaattaaataatattcactttt 162  Q
    ||||||||||||||||||   || |||||||||| ||||||||||||||||||||||||||||||    
T  20337480 caaataacacacctctttaaaaaaaaaaagtagagaaagaaaagaattaaataatattcactttt 20337544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 1471292 - 1471178
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  || ||| |   | || |||||||||||||||||||| ||  ||||||||||   ||||||||||||    
T  1471292 tttttactttatctctctattgctttgattttcgtgccaaaatctacttcttctttgtaaatttatggttgtcaaataagttgtctatcaaatagttgtt 1471193  T
Q  101 caaataacacacctc 115  Q
    |||||||||||||||    
T  1471192 caaataacacacctc 1471178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 1284495 - 1284602
Alignment:
Q  13 tctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    ||||||||||| |||||||||| |||||| ||   || ||||||  ||||||||| || | ||| ||||| ||||| |||| |||||||||||||||||     
T  1284495 tctctctattgctttaatttttgtgtcaataccactttttcttttcaaatttatgattgtatcaaaagttatcataaaaatggttgttcaaataacacaa 1284594  T
Q  113 ctctttaa 120  Q
    ||||||||    
T  1284595 ctctttaa 1284602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 35628021 - 35627907
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||||||||  ||||| |||  ||||| |||||| ||   || |||||| |||| |||||||||||||| ||||| |||  || ||||||||||    
T  35628021 tttttactttatctccttattgctttggtttttgtgtcaatacctctttttctttataaaattatggttatctcaaaagttatcaatcagatagttgttc 35627922  T
Q  102 aaataacacacctct 116  Q
    |||||||||| ||||    
T  35627921 aaataacacaactct 35627907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 12645861 - 12645797
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||| |||||||||||| |||||||||  |||||||||||||||||| ||| |||||    
T  12645861 ttctttgtaaatt-atggttatctcaaaagttgtcaaccaaatagttgttcaaatatcactcctct 12645797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 22817060 - 22817125
Alignment:
Q  53 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||||||||  |||||||| || |||||||||| ||| | ||||||||||||||||||||||||    
T  22817060 ctttgtaaattagtggttatcacaaaagttgtcattcaattggttgttcaaataacacacctcttt 22817125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7817705 - 7817820
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgt 99  Q
    ||||||||||||||||||||||| ||| |||||  ||  || |  || || ||||||||||||| |||||| || ||||||||||||  ||||| |||||    
T  7817705 atttttactttatctctctattgctttgattttcgtgcaaatatccactttttctttgtaaatt-atggttgtcacataagttgtcaaccaaatggttgt 7817803  T
Q  100 tcaaataacacacctct 116  Q
    ||||||||||| |||||    
T  7817804 tcaaataacactcctct 7817820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 38939980 - 38939865
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataag--ttgtcatacaaatagttgt 99  Q
    |||||||||||||||||||||| ||| |||||  |||| | ||  ||| ||||||  |||| ||| ||| |||||||||  |||||||| |||  |||||    
T  38939980 tttttactttatctctctattgctttgattttcgtgtctatacttatttttctttacaaatctatagttgtctcataagttttgtcatataaaatgttgt 38939881  T
Q  100 tcaaataacacacctc 115  Q
    ||||||||||||||||    
T  38939880 tcaaataacacacctc 38939865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 6253253 - 6253367
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||| ||| ||||||||| ||||||||||||||| | ||  | || || |||| |  | ||| |||||||||||||||||||| ||||| |||||     
T  6253253 tttttactgtatttctctattgctttaatttttatgtctatacctactttttttttgcaggtctatagttatctcataagttgtcatgcaaatggttgtc 6253352  T
Q  101 caaataacacacctc 115  Q
    ||||||| |||||||    
T  6253353 caaataatacacctc 6253367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 32351604 - 32351542
Alignment:
Q  56 tgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||||||||||||  ||||||||||||||||||||| || |||||| ||| ||| ||||||    
T  32351604 tgtaaatttatggttgactcataagttgtcatacaaatggtagttcaattaatacaactcttt 32351542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 40417844 - 40417953
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||| | ||||||||| |||  |||||||||||| ||  || | ||||||||||| || ||||| ||||| |||||||| || |||||| ||||    
T  40417844 tttttactttctttctctattgctttggtttttatgtcaatacctcact-ttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgtt 40417942  T
Q  101 caaataacaca 111  Q
    |||||||||||    
T  40417943 caaataacaca 40417953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 38656657 - 38656722
Alignment:
Q  53 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    ||||||||||| |||||| || || ||||| |||| ||| | ||||||||||||||||||||||||    
T  38656657 ctttgtaaattaatggttctcacaaaagttatcattcaattggttgttcaaataacacacctcttt 38656722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 25200248 - 25200200
Alignment:
Q  69 ttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    ||||| |||||||||| |  |||||||||||||||||||||||||||||    
T  25200248 ttatcacataagttgttaagcaaatagttgttcaaataacacacctctt 25200200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31274542 - 31274502
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaa 41  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  31274542 atttttactttctctctctattgttttagtttttatgtcaa 31274502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 35600791 - 35600855
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    |||||||||||||  ||||| || || |||||||||  ||||| |||||||||||||||||||||    
T  35600791 ttctttgtaaattagtggttgtcacaaaagttgtcactcaaatggttgttcaaataacacacctc 35600855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 10700184 - 10700078
Alignment:
Q  4 tttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaa 103  Q
    |||||||| ||||||||||| ||| |||||| |||||| ||   || |||||| |||| |||||||| || || |||||||||  |||||  ||||||||    
T  10700184 tttactttctctctctattgctttgatttttgtgtcaagacttttt-ttctttataaaattatggttgtcccaaaagttgtcaatcaaatgattgttcaa 10700086  T
Q  104 ataacaca 111  Q
    ||||||||    
T  10700085 ataacaca 10700078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 11352925 - 11352859
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||||    
T  11352925 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcttt 11352859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 23034391 - 23034457
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||||||||||||||||| || |  ||||||||| |||||| |||||||||||| | |||||||||    
T  23034391 ttctttgtaaatttatggttgtc-ctgaagttgtcacacaaatggttgttcaaatagcccacctcttt 23034457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 47356103 - 47356174
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaaga 122  Q
    |||||| |||||  |||||| || | ||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  47356103 ttctttataaatcaatggttgtcccgtaagttgtcatacaaatggttgttaaaataacacaactcttaaaga 47356174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 46022219 - 46022153
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  46022219 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 46022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 47495040 - 47495070
Alignment:
Q  2 tttttactttatctctctattgttttaattt 32  Q
    |||||||||||||||||||||||||||||||    
T  47495040 tttttactttatctctctattgttttaattt 47495070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 39497253 - 39497184
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 120  Q
    ||||||||| ||| |||||| ||| ||||||| ||||  |||| ||||||||||||||||| ||| ||||    
T  39497253 ttctttgtacattaatggttgtcttataagttatcattgaaatggttgttcaaataacacaactcattaa 39497184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3683601 - 3683641
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaa 41  Q
    ||||||| ||| |||||||||||||||||||||| ||||||    
T  3683601 atttttattttctctctctattgttttaatttttgtgtcaa 3683641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 18856540 - 18856608
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggtt 70  Q
    |||||||||| ||||||||||||||| |||||  | |||| || || | |||||| |||||||||||||    
T  18856540 tttttactttctctctctattgttttgattttcttctcaatacccactattctttataaatttatggtt 18856608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 39110994 - 39111042
Alignment:
Q  63 ttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||| || ||||||||||||||||  ||||| ||||||||||||||||    
T  39110994 ttatgattgtctcataagttgtcattaaaataattgttcaaataacaca 39111042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 42553017 - 42553077
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||||||| |||||||| ||||| ||||| |||   |||| |||||||||||||||||    
T  42553017 ttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataacaca 42553077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 46725725 - 46725785
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||||||||| ||  ||| |||||||||||||||   |||||||| |||||||||||||    
T  46725725 ttctttgtaaatctaaagttgtctcataagttgtcaacaaaatagttattcaaataacaca 46725785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 46812906 - 46812874
Alignment:
Q  2 tttttactttatctctctattgttttaattttt 34  Q
    |||||||||||||||||||||||||| ||||||    
T  46812906 tttttactttatctctctattgttttgattttt 46812874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 27371212 - 27371327
Alignment:
Q  3 ttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttca 102  Q
    ||||||||| |||||||||||||| | |||| ||||||| ||  | | |||||||||||||||||||| ||||||||||| ||| | |||| ||||||||    
T  27371212 ttttactttctctctctattgtttgagttttcatgtcaatacctacttttctttgtaaatttatggttgtctcataagttctcaaataaattgttgttca 27371311  T
Q  103 aataacacacctcttt 118  Q
    ||||||||||||||||    
T  27371312 aataacacacctcttt 27371327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 6520823 - 6520716
Alignment:
Q  13 tctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    |||||||||||||||  |||| ||||||||||  ||| ||||||| || ||||||||| |  || |  ||||||||||||| ||||||||||||||||||    
T  6520823 tctctctattgttttggttttcatgtcaacacctatttttctttgaaattttatggttgtaccaaatattgtcatacaaatggttgttcaaataacacac 6520724  T
Q  113 ctctttaa 120  Q
    ||||||||    
T  6520723 ctctttaa 6520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 24990185 - 24990290
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||||||| | |||||||||  ||||| | || ||||  ||| |||||||||||||||||||| || |||||||||||||||||||  || |||    
T  24990185 tttttactttatctttttattgttttggtttttgtatcgacacctatttttctttgtaaatttatggttgtcccataagttgtcatacaaatgattattc 24990284  T
Q  102 aaataa 107  Q
    ||||||    
T  24990285 aaataa 24990290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 50831754 - 50831642
Alignment:
Q  4 tttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaa 103  Q
    |||||||| ||||||||||| ||| |||||| |||||| ||   || ||||||||||| |||||||| || || |||||||||  ||||| |||||||||    
T  50831754 tttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaa 50831655  T
Q  104 ataacacacctct 116  Q
    |||||||| ||||    
T  50831654 ataacacaactct 50831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 336809 - 336694
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||| |||| ||||||||||| ||| |||||| || ||| ||   || ||||||| ||||| |||||| | ||| ||||||||||| ||| |||||||    
T  336809 atttttgctttctctctctattgctttgatttttgtgccaataccactttttctttgcaaattaatggttgtatcaaaagttgtcataaaaaaagttgtt 336710  T
Q  101 caaataacacacctct 116  Q
    ||||||||||| ||||    
T  336709 caaataacacaactct 336694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 32696791 - 32696673
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgtt-ctttgtaaatttatggttatctcataagttgtcatacaaatagttgt 99  Q
    ||||||||||||||||||||||| ||| ||||  ||||||| |   | | || |||||||||||||||||| |   |||| ||||||  ||||| |||||    
T  32696791 atttttactttatctctctattgctttgatttccatgtcaaaatcaacttttactttgtaaatttatggttgtacaataaattgtcaaccaaatggttgt 32696692  T
Q  100 tcaaataacacacctcttt 118  Q
    |||||||||||||||||||    
T  32696691 tcaaataacacacctcttt 32696673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 43769781 - 43769894
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||| |||||||||||||||  ||  || || || || ||||||||||||| |||||| || |||||||| |||   |||||||||||    
T  43769781 tttttactttatctctttattgttttaattttcgtgcaaatacccactttttctttgtaaatt-atggttgtcgcataagttatcaacaaaatagttgtt 43769879  T
Q  101 caaataacacacctc 115  Q
    |||||||||| ||||    
T  43769880 caaataacactcctc 43769894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 19174726 - 19174661
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||||||| || ||||| ||||||||| |||| | ||||||||||||||||| ||||    
T  19174726 ttctttgtaaatttatgtttgtctcaaaagttgtcacacaattggttgttcaaataacacatctct 19174661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 39654905 - 39655009
Alignment:
Q  13 tctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||||||| ||| |||||| |||||| ||  |||| |||||||||||||||||||| ||| | || || ||||  ||||||||||||||||||||||    
T  39654905 tctctctattgctttgatttttgtgtcaatacctcatt-ttctttgtaaatttatggttgtcttaaaaattatcatctaaatagttgttcaaataacaca 39655003  T
Q  112 cctctt 117  Q
     |||||    
T  39655004 actctt 39655009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 1627510 - 1627440
Alignment:
Q  51 ttctttgtaaatttatggttatctcat---aagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||||||||||||||||| || ||    |||||||||| ||||||||||||||||||||||| ||||||    
T  1627510 ttctttgtaaatttatggttgtcacaacaaaagttgtcatccaaatagttgttcaaataacacaactcttt 1627440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 12595630 - 12595515
Alignment:
Q  3 ttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttca 102  Q
    ||||||||| |||||||||||||||  ||||  |||||| ||  | | | |||| ||||||||||||| || || || |||||||  |||| ||||||||    
T  12595630 ttttactttctctctctattgttttggttttcgtgtcaatacctactttcctttataaatttatggttgtcccaaaaattgtcatcaaaatggttgttca 12595531  T
Q  103 aataacacacctcttt 118  Q
    ||||||||| ||||||    
T  12595530 aataacacatctcttt 12595515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 34616680 - 34616746
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||||| ||||||||||||||| |||||    
T  34616680 ttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactctt 34616746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 42815526 - 42815588
Alignment:
Q  53 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    |||||||||||||||||| ||  ||||||||||   ||||| |||||||||||||||||||||    
T  42815526 ctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 42815588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 515597 - 515528
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 120  Q
    |||||| |||||||||| |||| ||| ||||||||||| |||||  | ||||||||||||| ||||||||    
T  515597 ttctttataaatttatgattatttcaaaagttgtcatataaataaatattcaaataacacaactctttaa 515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 18767937 - 18768046
Alignment:
Q  9 tttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataac 108  Q
    |||||||||| |||| |||  |||| ||||||| ||  | | |||||| ||||||||||||| ||| | ||||| ||| ||||||| ||||| |||||||    
T  18767937 tttatctctcgattgctttggttttcatgtcaatacctacttttctttataaatttatggttgtcttaaaagttatcacacaaataattgtttaaataac 18768036  T
Q  109 acacctcttt 118  Q
    |||| |||||    
T  18768037 acacatcttt 18768046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 47744509 - 47744389
Alignment:
Q  6 tactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaa-tagttgttcaaa 104  Q
    |||||||||||||||||| |||| ||||| |  ||| |  |||| ||||||||||| |||||||| || || ||||| |||  |||| ||||||||||||    
T  47744509 tactttatctctctattgctttagtttttgtaccaatat-catttttctttgtaaaattatggttgtcccaaaagttatcaatcaaaatagttgttcaaa 47744411  T
Q  105 taacacacctctttaagaaaaa 126  Q
    ||||||| ||||| || |||||    
T  47744410 taacacaactcttaaaaaaaaa 47744389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 52430948 - 52431057
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    ||||||| || |||||||||| ||||  ||||| |||||| ||  | | || ||||||||  |||  || ||||||| |||||||||||||| |||||||    
T  52430948 tttttaccttgtctctctattattttggtttttgtgtcaatacttacttttgtttgtaaagctataattgtctcataggttgtcatacaaatggttgttc 52431047  T
Q  102 aaataacaca 111  Q
    ||||||||||    
T  52431048 aaataacaca 52431057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 28417652 - 28417548
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||||||| |||| || |||||||||| |||||| |   | | ||||||||||| ||||| || ||  |||| |||||| ||||||||||| ||    
T  28417652 tttttactttatctttctactgctttaatttttgtgtcaataattacttttctttgtaaaattatgattgtccaataaattgtcaaacaaatagttgctc 28417553  T
Q  102 aaata 106  Q
    |||||    
T  28417552 aaata 28417548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 49896667 - 49896564
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  |||||| ||  | || ||||||||||| |||||||| |||||| |||||||   ||||| ||||||    
T  49896667 tttttactttatctctctattgctttgattttcgtgtcaataccaactttttctttgtaaa-ttatggttgtctcatgagttgtccaccaaatggttgtt 49896569  T
Q  101 caaat 105  Q
    |||||    
T  49896568 caaat 49896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 53796777 - 53796841
Alignment:
Q  53 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||||||||  ||||| || || |||||||||| ||| ||||||||||||||||||| |||||    
T  53796777 ctttgtaaattagtggttgtcacaaaagttgtcattcaattagttgttcaaataacacagctctt 53796841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 116
Target Start/End: Complemental strand, 12375899 - 12375864
Alignment:
Q  81 ttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||| ||||||||||||||||||||||    
T  12375899 ttgtcatacaaatggttgttcaaataacacacctct 12375864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 17683461 - 17683527
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||||    
T  17683461 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcttt 17683527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 33423461 - 33423527
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgt-catacaaatagttgttcaaataacacacctctttaa 120  Q
    ||||||||||||||||||||  ||||||||| |||| |||| ||||| ||||||||||| ||||||||    
T  33423461 tttgtaaatttatggttatcaaataagttgtccata-aaatggttgtgcaaataacacatctctttaa 33423527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 35936085 - 35936152
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||||| ||| ||||||| ||  | ||||||||| ||||||  |||||||||||||||||||||||    
T  35936085 ttctttgtgaatgtatggttgtcctaaaagttgtcacacaaatgattgttcaaataacacacctcttt 35936152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 24509339 - 24509273
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||||||||||  ||||| || || || || |||  |||||||||||||||||||||||||||||    
T  24509339 ttctttgtaaattagtggttgtcacaaaaattatcactcaaatagttgttcaaataacacacctctt 24509273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 26148151 - 26148093
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    ||||||||| ||||||| | | ||||||||| |||||||| ||||||||||||| ||||    
T  26148151 tttgtaaatctatggttgttttataagttgttatacaaatggttgttcaaataaaacac 26148093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 38382440 - 38382506
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  38382440 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 38382506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 45143624 - 45143567
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 109  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||    
T  45143624 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatagttgttcaaataaca 45143567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 45152393 - 45152336
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 109  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||    
T  45152393 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatagttgttcaaataaca 45152336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 47181960 - 47182026
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  47181960 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 47182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 48402149 - 48402083
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  48402149 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 48402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 50890075 - 50889965
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||| |||| ||||||||||| ||| |||||| || ||| ||   || ||||||| ||||| |||||| | ||| ||||||| ||| |||  ||||||    
T  50890075 atttttgctttctctctctattgctttgatttttgtgccaataccactttttctttgcaaattaatggttgtatcaaaagttgttataaaaaaggttgtt 50889976  T
Q  101 caaataacaca 111  Q
    |||||||||||    
T  50889975 caaataacaca 50889965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 1797770 - 1797713
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||||| |||| || |||| ||||||||||| ||||| || ||||||||||||||    
T  1797770 tttgtaaatctatgattgtctcgtaagttgtcattcaaatggtagttcaaataacaca 1797713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 3078857 - 3078792
Alignment:
Q  53 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||||||||||||||| ||  ||||||||||   |||||  |||||||||||| ||||||||||    
T  3078857 ctttgtaaatttatggttgtcaaataagttgtctatcaaatgattgttcaaataagacacctcttt 3078792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10474114 - 10474045
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggtt 70  Q
    ||||||||||| ||||||||||  ||| |||||| |||||| ||   || ||||||||||||||||||||    
T  10474114 atttttactttttctctctattactttgatttttgtgtcaatacttctttttctttgtaaatttatggtt 10474045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 14603576 - 14603637
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    |||||| ||||||||||||| ||||| || |||||||  ||||  |||||||||||||||||    
T  14603576 ttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacacac 14603637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 17367215 - 17367248
Alignment:
Q  80 gttgtcatacaaatagttgttcaaataacacacc 113  Q
    ||||||| ||||||||||||||||||||||||||    
T  17367215 gttgtcacacaaatagttgttcaaataacacacc 17367248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 22819769 - 22819833
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||    
T  22819769 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 22819833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 23662268 - 23662211
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataac 108  Q
    |||||||||||||||||||||||  |||| ||||||   |||| ||||||||||||||    
T  23662268 ttctttgtaaatttatggttatcaaataaattgtcaattaaatggttgttcaaataac 23662211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 33093068 - 33093003
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||| |   || ||||||||||| || || |||| ||||||||||||||||||||||    
T  33093068 ttctttgtaaattaactattgtctcataagttatcgtataaatggttgttcaaataacacacctct 33093003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 42491193 - 42491262
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 120  Q
    |||||||| || |||||||| || || |||||||||  ||||| ||||||||||||||||| ||| ||||    
T  42491193 ttctttgtgaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactccttaa 42491262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 46038782 - 46038840
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||||||||||||| |||||  | ||||||||||  ||||| ||||||||||||||||    
T  46038782 ttctttgtaaatttatgattatcataaaagttgtcat--aaataattgttcaaataacaca 46038840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 14113614 - 14113502
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||||||||||||||| ||| |||||  |||||| ||  | | || |||  |||| ||||||| | |||||| |||||||| |||  || | ||    
T  14113614 tttttactttatctctctattgctttgattttcgtgtcaatacttacttttttttacaaatctatggttgtttcataacttgtcatataaaaggtagatc 14113515  T
Q  102 aaataacacacct 114  Q
    |||||||||||||    
T  14113514 aaataacacacct 14113502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 52895401 - 52895445
Alignment:
Q  76 ataagttgtcatacaaatagttgttcaaataacacacctctttaa 120  Q
    |||||||||||  ||||| ||||||||||||||||| ||||||||    
T  52895401 ataagttgtcaatcaaatggttgttcaaataacacaactctttaa 52895445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27546133 - 27546249
Alignment:
Q  1 atttttactttatctctctattgt--tttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttg 98  Q
    ||||||||||||| |||||||| |  ||| ||||||||||||| |   ||| ||||||||| ||||||| || ||||| ||||||||| ||||||||||     
T  27546133 atttttactttatatctctattttgctttgatttttatgtcaatatctatttttctttgtacatttatgattgtctcaaaagttgtcacacaaatagtta 27546232  T
Q  99 ttcaaataacacacctc 115  Q
    |||||||||||||||||    
T  27546233 ttcaaataacacacctc 27546249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 24405907 - 24405841
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||||||||||||| ||| | ||| ||||||||| ||||||||||||||||||||||||| ||||    
T  24405907 ttctttgtaaatttatagttgtttcaaaagttgtcaaacaaatagttgttcaaataacacacttctt 24405841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 6940151 - 6940037
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttc-tttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  || ||| ||  | | ||| ||||||||||||||||| ||  ||||||||||   ||||| ||||||    
T  6940151 tttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgtt 6940052  T
Q  101 caaataacacacctc 115  Q
    |||||||||||||||    
T  6940051 caaataacacacctc 6940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 34546487 - 34546600
Alignment:
Q  3 ttttactttatctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    ||||||||| | ||||||||| ||| ||||||||||||| ||  |||| |||||| || |||||| ||| || || || |||||||||||| ||||||||    
T  34546487 ttttactttctatctctattgatttgatttttatgtcaatacctcatt-ttctttatacatttatagttgtcccaaaaattgtcatacaaaaagttgttc 34546585  T
Q  102 aaataacacacctct 116  Q
    |||||||||| ||||    
T  34546586 aaataacacaactct 34546600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 15953046 - 15952938
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  ||  || || || || ||||||||||||| |||||| || ||||||||||||  ||||| ||||||    
T  15953046 tttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaatt-atggttgtcacataagttgtcaaccaaatggttgtt 15952948  T
Q  101 caaataacac 110  Q
    ||||||||||    
T  15952947 caaataacac 15952938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 9939433 - 9939317
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttc-tttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  || ||| ||  | | ||| ||||||||||||||||| ||  |||| |||||   ||||| ||||||    
T  9939433 tttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataaattgtctatcaaatggttgtt 9939334  T
Q  101 caaataacacacctctt 117  Q
    |||||||||||||||||    
T  9939333 caaataacacacctctt 9939317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 18695440 - 18695504
Alignment:
Q  53 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||||||||||||||| ||  ||||||||||   ||||| |||||||||||||||||||||||    
T  18695440 ctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctctt 18695504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 41175707 - 41175592
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| || ||  ||  || || || || ||||||||||||| |||||| || ||||||||||||  ||||| ||||||    
T  41175707 tttttactttatctctctattgctttgatcttcgtgcaaatacccactttttctttgtaaatt-atggttgtcacataagttgtcaaccaaatggttgtt 41175609  T
Q  101 caaataacacacctctt 117  Q
    |||||||||| ||||||    
T  41175608 caaataacactcctctt 41175592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 1293069 - 1293013
Alignment:
Q  52 tctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataac 108  Q
    ||||||||||||||||||| ||  | |||||||||||||||| ||| ||||||||||    
T  1293069 tctttgtaaatttatggttgtccaaaaagttgtcatacaaatggttattcaaataac 1293013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 17154524 - 17154421
Alignment:
Q  13 tctctctattgttttaatttttatgtcaacac-gcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||||||| |||||||||||||| || || ||||| |||||| |||||  ||| |||||   |||||||||||  |||| |||||||||||||||||    
T  17154524 tctctctattgctttaatttttatgttaataccgcatt-ttctttataaatcaatgtttatcctttaagttgtcattgaaatggttgttcaaataacaca 17154426  T
Q  112 cctct 116  Q
     ||||    
T  17154425 actct 17154421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 10649555 - 10649621
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||||    
T  10649555 ttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaatggttgttcaaataacactcctcttt 10649621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 33655365 - 33655298
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||| ||||||||||||| |  || ||||| ||||| |||||||| ||||||||||||| ||||||    
T  33655365 ttctttataaatttatggttgtaccaaaagttatcataaaaatagttattcaaataacacaactcttt 33655298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 8675434 - 8675321
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  ||  || ||  | || ||||||||||||| |||||| || || |||||||||  ||||| ||||||    
T  8675434 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgtt 8675336  T
Q  101 caaataacacacctc 115  Q
    |||||||||| ||||    
T  8675335 caaataacactcctc 8675321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 17626105 - 17626171
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  17626105 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 17626171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 19839937 - 19839873
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||| |||||| || || ||||| |||  |||||||||||||||||||||| |||||    
T  19839937 ttctttgtaaatt-atggttgtcccaaaagttatcaaccaaatagttgttcaaataacacgcctct 19839873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 36321785 - 36321684
Alignment:
Q  15 tctctattgttttaatttttatgtcaacacgc-attgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacc 113  Q
    ||||||||| ||| |||||| |||||| ||   ||| |||||||||||| ||||||| |   ||||||||| |  ||||| |||||||||||||||||||    
T  36321785 tctctattgcttttatttttgtgtcaatacatgatttttctttgtaaatctatggtttttcaataagttgttaatcaaatggttgttcaaataacacacc 36321686  T
Q  114 tc 115  Q
    ||    
T  36321685 tc 36321684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42267415 - 42267523
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    ||||||||||||||||||||||||| | ||||   |||||| ||   || |||||| |||| |||||||| ||  ||||||||||||  || | ||||||    
T  42267415 atttttactttatctctctattgttatgatttccgtgtcaatactattttttctttataaa-ttatggttgtcaaataagttgtcatcaaattggttgtt 42267513  T
Q  101 caaataacac 110  Q
    ||||||||||    
T  42267514 caaataacac 42267523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 43441858 - 43441922
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||| |||||| ||| | |||||||||  ||||| |||||||||||||||| |||||    
T  43441858 ttctttgtaaatt-atggttgtcttaaaagttgtcaaccaaatggttgttcaaataacactcctct 43441922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 21353263 - 21353331
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 119  Q
    ||||||||||| |||||||| || || |||||||||  ||||| |||||| ||||||| || |||||||    
T  21353263 ttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgtttaaataactcaactcttta 21353331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 44977500 - 44977391
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| ||||||||||| |||  ||||| |||||| || |  | |||||||||||||||||||| ||||||||||| || | ||||| |||||||    
T  44977500 tttttactttctctctctattgctttggtttttgtgtcaataccccattttctttgtaaatttatggttgtctcataagttttcgttcaaatggttgttc 44977401  T
Q  102 aaataacaca 111  Q
    ||||||||||    
T  44977400 aaataacaca 44977391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 20532414 - 20532354
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20532414 ttctttataaatttatggttatcccataagttatcatacaaatagttgttcaaataacaca 20532354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 44050134 - 44050201
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||||||||||||||||| ||||| ||||||||  |||||| ||||||||||||||||||||||||    
T  44050134 ttctttgtaaatttatggttgtctcaaaagttgtcgcacaaatggttgttcaaataacacacctcttt 44050201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 1907764 - 1907650
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| ||||||||||||||| |||||| ||||||  |   || |||||||||||||||||||| ||  | ||||||||||  ||||  ||||||    
T  1907764 tttttactttctctctctattgttttgatttttgtgtcaattccgctttttctttgtaaatttatggttgtcatacaagttgtcatctaaatgattgttc 1907665  T
Q  102 aaataacacacctct 116  Q
    |||||||||| ||||    
T  1907664 aaataacacaactct 1907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 34134772 - 34134658
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgtt-ctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  |||||| ||  | | || |||||||||||||||||| ||  ||||||||||   ||||| ||||||    
T  34134772 tttttactttatctctctattgctttgattttcgtgtcaaaacctactcttcctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgtt 34134673  T
Q  101 caaataacacacctc 115  Q
    |||||||||||||||    
T  34134672 caaataacacacctc 34134658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 3412506 - 3412442
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    |||||||||||||||||||| | ||| ||||||||| | ||||||||||||||| ||||||||||    
T  3412506 ttctttgtaaatttatggttgtttcaaaagttgtcacataaatagttgttcaaacaacacacctc 3412442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 16199713 - 16199603
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    ||||||||||| ||||||||||||||  |||| ||||| | ||  | | || ||||||||||||||||| |  ||||| || ||||||||||| || |||    
T  16199713 tttttactttacctctctattgttttggttttcatgtcgataccaacttttttttgtaaatttatggttgtaccataaattatcatacaaataattattc 16199614  T
Q  102 aaataacacac 112  Q
    |||||||||||    
T  16199613 aaataacacac 16199603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31296607 - 31296724
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    ||||||||||| | |||||||||||||  |||  |||| || |   ||| |||||||||||||||||||| ||  | ||||||||| || ||| ||||||    
T  31296607 atttttactttctgtctctattgttttggtttccatgttaatatctatttttctttgtaaatttatggttgtcataaaagttgtcacactaatggttgtt 31296706  T
Q  101 caaataacacacctcttt 118  Q
    ||||||||||| ||||||    
T  31296707 caaataacacatctcttt 31296724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 5054117 - 5054057
Alignment:
Q  58 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    ||||||||||||| ||||| ||||||||||| |||||||| || |||||||||| ||||||    
T  5054117 taaatttatggttgtctcaaaagttgtcatataaatagttttttaaataacacaactcttt 5054057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 9521927 - 9521991
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    |||||||||||||||||||| ||||| ||||| ||| |||||||  | |||||||||||||||||    
T  9521927 ttctttgtaaatttatggttgtctcaaaagttatcacacaaataaatattcaaataacacacctc 9521991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 14255422 - 14255486
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    |||||||||||||||||||| || || ||||||||  | |||| |||||||||||||||||||||    
T  14255422 ttctttgtaaatttatggttgtcccaaaagttgtcgcataaatggttgttcaaataacacacctc 14255486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 23352858 - 23352792
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    ||||||||||||| |||||| || ||||||||||||  ||||| |||||||||||||||| |||||||    
T  23352858 ttctttgtaaatt-atggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctcttt 23352792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 44254721 - 44254779
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacac 110  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||| ||||||||||||||||    
T  44254721 ttctttgtaaatt-atggttatcccataagttgtcaatcaaatggttgttcaaataacac 44254779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 39147836 - 39147945
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||| ||| | ||||||||| |||||| |||||| ||  |||| || |||||||||||||| || || || ||||||||||  |||| ||||||    
T  39147836 tttttactttctctttgtattgttttgatttttgtgtcaatacctcattttt-tttgtaaatttatgattgtcccaaaagttgtcattaaaatggttgtt 39147934  T
Q  101 caaataacaca 111  Q
    |||||||||||    
T  39147935 caaataacaca 39147945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 1863775 - 1863841
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 119  Q
    |||||||||||||||||||| ||||| |||||| |  |||||| |||||||||  ||||||||||||||    
T  1863775 ttctttgtaaatttatggttgtctcaaaagttgcc--acaaatggttgttcaagcaacacacctcttta 1863841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 32344616 - 32344680
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    ||||||||||||||||||||||   | || |||||| |||||||  |||||||||||||||||||    
T  32344616 ttctttgtaaatttatggttattctaaaaattgtcacacaaataactgttcaaataacacacctc 32344680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 36436753 - 36436690
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||||||||||||||||  ||||||||||| ||||||| | ||||||||||| ||| ||||||    
T  36436753 tttgtaaatttatggttataccataagttgtcttacaaattg-tgttcaaataatacaactcttt 36436690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 37105758 - 37105828
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaagaa 123  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||| ||| ||||||||    
T  37105758 ttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaatagttgttcaaataacactcct-tttaagaa 37105828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 42430720 - 42430828
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||  |||||||||||||||  |||   |||||| ||  | | ||||||||||| |||||||| |  || ||||||||| |||||| |||||||    
T  42430720 tttttacttcctctctctattgttttggtttccgtgtcaatacctacttttctttgtaaacttatggttgttccaaaagttgtcacacaaatggttgttc 42430819  T
Q  102 aaataacac 110  Q
    |||||||||    
T  42430820 aaataacac 42430828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 3012792 - 3012737
Alignment:
Q  63 ttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    |||||||| || ||||||||||||  ||||| |||||||||||||||| |||||||    
T  3012792 ttatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctcttt 3012737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 7258560 - 7258453
Alignment:
Q  4 tttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaa 103  Q
    |||||||| ||||||||||| ||| ||||||||||||| ||   || |||||| |||| |||| ||| || || || |||| |  ||||| |||||||||    
T  7258560 tttactttctctctctattgctttgatttttatgtcaagacctctttttctttataaaattatagttgtcccaaaaattgttaatcaaatggttgttcaa 7258461  T
Q  104 ataacaca 111  Q
    ||||||||    
T  7258460 ataacaca 7258453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 13765523 - 13765589
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaag 121  Q
    |||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| ||||||||||    
T  13765523 tttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctctttaag 13765589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 2130505 - 2130543
Alignment:
Q  3 ttttactttatctctctattgttttaatttttatgtcaa 41  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  2130505 ttttactttatctctctattattttagtttttatgtcaa 2130543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 3097813 - 3097747
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  3097813 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 3097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 13333122 - 13333056
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  13333122 ttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactctt 13333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 5032043 - 5032108
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    |||||||||||||||||||| ||  ||||||||||   ||||  ||||||||||||||||| ||||    
T  5032043 ttctttgtaaatttatggttgtcaaataagttgtctatcaaaaggttgttcaaataacacatctct 5032108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7664068 - 7663999
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggtt 70  Q
    ||||||||||| ||||||||||| |||  ||||| |||||| ||   || ||||||||||||||||||||    
T  7664068 atttttactttctctctctattgctttggtttttgtgtcaatacctctttttctttgtaaatttatggtt 7663999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 10216920 - 10217029
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| ||||||||||| ||   ||||| |||||| ||   || ||||||||||| ||||| |||||  |||||||||||   |||| ||||||     
T  10216920 tttttactttctctctctattgcttcggtttttgtgtcaatacctttttttctttgtaaaattatgattatcctataagttgtcaattaaattgttgttt 10217019  T
Q  102 aaataacaca 111  Q
    ||||||||||    
T  10217020 aaataacaca 10217029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 14891040 - 14890979
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    |||||||||||| ||||||| |  |||||||||| |  ||||| ||||||||||||||||||    
T  14891040 ttctttgtaaatctatggttgttccataagttgttaatcaaatggttgttcaaataacacac 14890979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 30220733 - 30220688
Alignment:
Q  75 cataagttgtcatacaaatagttgttcaaataacacacctctttaa 120  Q
    ||||||||||| || ||||||| |||||||||||| ||||||||||    
T  30220733 cataagttgtcctaaaaatagtggttcaaataacatacctctttaa 30220688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 30339813 - 30339756
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||| |||||||| || ||||||||||| ||||  |||| |||||||||||||||||    
T  30339813 tttgttaatttatgattgtctcataagttctcatttaaatggttgttcaaataacaca 30339756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 36625207 - 36625268
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    |||| ||||||||||||||| ||| | |  |||||||||||||| || ||||||||||||||    
T  36625207 ttctctgtaaatttatggttgtcttaaatattgtcatacaaataattattcaaataacacac 36625268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 43520977 - 43521042
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||| |||||| ||| ||| ||||||||  ||||  |||||||||||||| ||||||    
T  43520977 ttctttgtaaattgatggttgtcttataggttgtcatgtaaatgattgttcaaataacatacctct 43521042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 28494979 - 28495039
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||| ||||||||||||||| || || ||||||| ||  |||| |||||||||||||||||    
T  28494979 ttctgtgtaaatttatggttgtcacaaaagttgtaatttaaatggttgttcaaataacaca 28495039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 29879656 - 29879553
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaaca-cgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||| ||||| |||| ||||| ||||||||| || | | |||| ||||||||||| ||||  || || ||||||||||||| |||||  |||||    
T  29879656 tttttactttttctctttattattttagtttttatgtaaatatcacatt-ttctttgtaaaattataattgtcccataagttgtcattcaaatgattgtt 29879558  T
Q  101 caaat 105  Q
    |||||    
T  29879557 caaat 29879553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 36644035 - 36643972
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    ||||||||||||| |||||| || ||||| ||||||  ||||| |||||||||||||||| ||||    
T  36644035 ttctttgtaaatt-atggttgtcccataaattgtcaaccaaatggttgttcaaataacactcctc 36643972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 41056699 - 41056639
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | |||||||||||||||    
T  41056699 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacaca 41056639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 31433611 - 31433672
Alignment:
Q  53 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacct 114  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  31433611 ctttgtaaatctatggttgtctcataagttatcatacaaatagttgttcaaataacacacct 31433672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 44517962 - 44517844
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| | ||| |||| |||| |||||| |||||| ||  ||| |||||||||||||||| |||||| || ||||| ||| || ||| |||||||    
T  44517962 tttttactttttatctttattattttgatttttgtgtcaatacatatttttctttgtaaatttatagttatcccaaaagttatcacacgaatggttgttc 44517863  T
Q  102 aaataacacacctctttaa 120  Q
    |||||||||| ||||||||    
T  44517862 aaataacacaactctttaa 44517844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1821105 - 1820992
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||  || |||||||||||| |||||| ||  ||| || ||||||||| |||| || || |||||||||||||||||| | |||||    
T  1821105 atttttactttatctct--atcgttttaatttttgtgtcaatacttattttt-tttgtaaatctatgattgtcacataagttgtcatacaaacaattgtt 1821009  T
Q  101 caaataacacacctctt 117  Q
    ||||| |||||||||||    
T  1821008 caaatcacacacctctt 1820992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 50775157 - 50775043
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||||||||||||||| |||  ||||| |||||||||   || ||||||||||| |||||||| || || || ||||||  ||||| || ||||    
T  50775157 tttttactttatctctctattgctttggtttttgtgtcaacacatctttttctttgtaaaattatggttgtcacaaaatttgtcaatcaaatggtcgttc 50775058  T
Q  102 aaataacacacctct 116  Q
    |||||||||| ||||    
T  50775057 aaataacacaactct 50775043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 29706655 - 29706592
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacct 114  Q
    |||||||||||||||||||||||| | ||||||||| | ||||  |||||||||||||||||||    
T  29706655 ttctttgtaaatttatggttatcttaaaagttgtcacagaaatgattgttcaaataacacacct 29706592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 50824811 - 50824925
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| |||  |||| ||||||| ||  | || ||||||||||||| |||||| | ||||||||||||   ||||| ||||||    
T  50824811 tttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgtaaatt-atggttgtatcataagttgtccaccaaatggttgtt 50824909  T
Q  101 caaataacacacctct 116  Q
    |||||||||| |||||    
T  50824910 caaataacactcctct 50824925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 46281506 - 46281620
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| ||||| ||| ||| ||  | || | |||||||||||||||||| ||  ||| ||||||   ||||| ||||||    
T  46281506 tttttactttatctctctattgctttgattttcatgccaaaacctacttttcctttgtaaatttatggttgtcaaatatgttgtctatcaaatggttgtt 46281605  T
Q  101 caaataacacacctc 115  Q
    |||||||||||||||    
T  46281606 caaataacacacctc 46281620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 11597756 - 11597821
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    |||||||||||| ||||||| || ||||||||||||  ||||| | ||||||||||||||||||||    
T  11597756 ttctttgtaaatctatggttgtcccataagttgtcaagcaaatggatgttcaaataacacacctct 11597821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 27357613 - 27357678
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||||||| || | ||| ||||||||| ||||||| || ||||||||||||||||||    
T  27357613 ttctttgtaaatttatgattgtatcaaaagttgtcacacaaatatttattcaaataacacacctct 27357678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 51436772 - 51436655
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||| |||||||||  |||| ||||||| ||  | || |||||||||||| ||||||| ||  |||||||||||  |||||  |||||    
T  51436772 tttttactttatctctttattgttttggttttcatgtcaatacctactttttctttgtaaatctatggttgtcatataagttgtcaaccaaattattgtt 51436673  T
Q  101 caaataacacacctcttt 118  Q
    ||||||||| || |||||    
T  51436672 caaataacatacatcttt 51436655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 37610734 - 37610671
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||||||||||||||  ||||||| |||||||| |||| ||| ||||||||||||| |||||    
T  37610734 tttgtaaatttatggttggctcataaattgtcatataaattgttattcaaataacacaactctt 37610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 6949932 - 6949866
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||||||||  |||||  | ||||||||| ||||||||||||||| ||||||||||||||    
T  6949932 ttctttataaatttatatttatcgtaaaagttgtcacacaaatagttgttcagataacacacctctt 6949866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 33358159 - 33358051
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    ||||||||||||||||| |||| ||| |||||  ||  || || || || ||||||||||||| |||||| || ||||||||||||  ||||| ||||||    
T  33358159 tttttactttatctctcaattgatttgattttcgtgcaaatacccactttttctttgtaaatt-atggttgtcacataagttgtcaaccaaatggttgtt 33358061  T
Q  101 caaataacac 110  Q
    ||||||||||    
T  33358060 caaataacac 33358051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 51571347 - 51571238
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| ||| ||||||| |||  ||||| |||||| ||   || ||||||||||| |||||||| || || || ||||||  ||||| |||||||    
T  51571347 tttttactttctctttctattgctttggtttttgtgtcaatacctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggttgttc 51571248  T
Q  102 aaataacaca 111  Q
    ||||||||||    
T  51571247 aaataacaca 51571238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 10889997 - 10889934
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||| ||||    
T  10889997 ttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaatagttgttcaaataacactcctc 10889934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 13489782 - 13489845
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||| ||||    
T  13489782 ttctttgtaaatt-atggttgtcccagaagttgtcaaccaaatagttgttcaaataacactcctc 13489845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 31975110 - 31975169
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||||||||| ||| ||| ||| ||||||| ||||| ||||||||||||||||||||||    
T  31975110 ttctttgtaaatctatagttgtcttataagttatcata-aaatagttgttcaaataacaca 31975169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 40699837 - 40699757
Alignment:
Q  3 ttttactttatctctctattgttttaatttttatgtcaacacgcat-tgttctttgtaaatttatggttatctcataagtt 82  Q
    ||||||||||||||||| ||| |||||||||  |||||| ||  || | |||||||||||||||||||| ||| |||||||    
T  40699837 ttttactttatctctctgttgctttaattttcgtgtcaatacatatattttctttgtaaatttatggttgtctaataagtt 40699757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 112
Target Start/End: Complemental strand, 4862346 - 4862311
Alignment:
Q  77 taagttgtcatacaaatagttgttcaaataacacac 112  Q
    |||||||||||| |||||||||||||||||||||||    
T  4862346 taagttgtcatataaatagttgttcaaataacacac 4862311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 18512344 - 18512305
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaa 41  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  18512344 tttttactttatctctctattgctttagtttttatgtcaa 18512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 29154898 - 29154964
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 118  Q
    ||||||||||||| || ||| || ||||||||||||  ||||| |||||||||||||||| |||||||    
T  29154898 ttctttgtaaatt-atcgttgtcccataagttgtcaaccaaatggttgttcaaataacactcctcttt 29154964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 32158748 - 32158685
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacct 114  Q
    ||||||||||||||||| || | || ||||||||||| |||||  | |||||||||||||||||    
T  32158748 ttctttgtaaatttatgattgtttcgtaagttgtcatgcaaatgatcgttcaaataacacacct 32158685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 18434865 - 18434982
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||| ||||| ||||||||| |||||| || ||| ||  |||| ||||||| ||| || ||||| || || ||||||||||  |||||| | ||    
T  18434865 tttttactttctctctttattgttttgatttttgtgccaatacatcatt-ttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagatttt 18434963  T
Q  101 caaataacacacctcttta 119  Q
    ||||||||||| |||||||    
T  18434964 caaataacacaactcttta 18434982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 41451768 - 41451810
Alignment:
Q  72 tctcataagttgtcatacaaatagttgttcaaataacacacct 114  Q
    |||| |||||||||||| |||| ||||||||||||||||||||    
T  41451768 tctcgtaagttgtcatataaatggttgttcaaataacacacct 41451810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 47721479 - 47721592
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  |||||| ||  | || ||||||||||| |||||||| || |||||||||||    |||| ||||||    
T  47721479 tttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaa-ttatggttgtcccataagttgtccactaaatggttgtt 47721577  T
Q  101 caaataacacacctc 115  Q
     ||||||||| ||||    
T  47721578 taaataacactcctc 47721592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 47728471 - 47728584
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  |||||| ||  | || ||||||||||| |||||||| || |||||||||||    |||| ||||||    
T  47728471 tttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaa-ttatggttgtcccataagttgtccactaaatggttgtt 47728569  T
Q  101 caaataacacacctc 115  Q
     ||||||||| ||||    
T  47728570 taaataacactcctc 47728584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 12127983 - 12128044
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtca-tacaaatagttgttcaaataacaca 111  Q
    ||||||| |||| ||||||| || |||||||| ||| ||||||| |||||||||||||||||    
T  12127983 ttctttggaaatctatggttgtcccataagttatcaatacaaatggttgttcaaataacaca 12128044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 14442330 - 14442407
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcata 78  Q
    |||||||||||||| ||| ||| ||| |||||| |||||| ||  | || |||||||||||| |||||||||||||||    
T  14442330 tttttactttatctatctgttgctttgatttttgtgtcaatacatactttttctttgtaaatctatggttatctcata 14442407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 32266269 - 32266228
Alignment:
Q  74 tcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    ||||||| |||||| ||||||||||||||||||| |||||||    
T  32266269 tcataaggtgtcatgcaaatagttgttcaaataagacacctc 32266228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 42468664 - 42468701
Alignment:
Q  3 ttttactttatctctctattgttttaatttttatgtca 40  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  42468664 ttttactttatctctttattgttttaatttttgtgtca 42468701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 50328092 - 50328028
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||    
T  50328092 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 50328028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 8447806 - 8447838
Alignment:
Q  2 tttttactttatctctctattgttttaattttt 34  Q
    ||||||||||||||||||||||||||| |||||    
T  8447806 tttttactttatctctctattgttttagttttt 8447838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 16063564 - 16063512
Alignment:
Q  57 gtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 109  Q
    |||||||||||||| || || || || ||| ||||||||||||||||||||||    
T  16063564 gtaaatttatggttgtcccaaaaattatcacacaaatagttgttcaaataaca 16063512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 19947696 - 19947636
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||||  |||||||||||||||    
T  19947696 ttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacaca 19947636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49559202 - 49559142
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaa 61  Q
    ||||||| ||||||||||||||| ||||||||||||  ||||||  | | |||||||||||    
T  49559202 atttttattttatctctctattgctttaatttttataccaacacatacttttctttgtaaa 49559142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 50239113 - 50239053
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacct 114  Q
    ||||||||||  ||||| || || |||||||||  ||||| ||||||||||||||||||||    
T  50239113 tttgtaaattagtggttgtcacaaaagttgtcactcaaatggttgttcaaataacacacct 50239053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 24795370 - 24795434
Alignment:
Q  53 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||    
T  24795370 ctttataaatttatggttgtctcataagttgtcaaacaaatagttgttcaaataacatacctctt 24795434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 10644803 - 10644689
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttc-tttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| |||||||||  || ||| ||  | | ||| ||||||||||||||||| ||  ||||||||||   ||||| ||||||    
T  10644803 tttttactttatctctctattgctttaattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgtt 10644704  T
Q  101 caaataacacacctc 115  Q
    |||||||||||||||    
T  10644703 caaataacacacctc 10644689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 6445247 - 6445366
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca---ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttg 98  Q
    |||||||||||||||||||||||||| |||||| ||| || |   |   || || ||||||||||||||||| || ||||||||||||  ||||| || |    
T  6445247 tttttactttatctctctattgttttgatttttgtgttaatatctaccttttttttttgtaaatttatggttgtcccataagttgtcaatcaaatggtcg 6445346  T
Q  99 ttcaaataacacacctcttt 118  Q
    ||||||||||||| ||||||    
T  6445347 ttcaaataacacatctcttt 6445366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 37754632 - 37754748
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| |||||||||||||||  |||   || ||| ||  ||| |||||||||||||||  ||| |  || |||||||||||||||| ||||||     
T  37754632 tttttactttctctctctattgttttggtttccgtgccaatacctatttttctttgtaaatttaaagttgttccaaaagttgtcatacaaatggttgttt 37754731  T
Q  102 aaataacacacctcttt 118  Q
    |||||||||||||||||    
T  37754732 aaataacacacctcttt 37754748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 14707344 - 14707236
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    ||||||||||||||| |||||| ||| |||||  |||||| ||  | || ||||||||||||| ||| || ||||||||||||||   ||||||||||||    
T  14707344 tttttactttatctccctattgctttgattttcttgtcaatacctactttttctttgtaaatt-atgattgtctcataagttgtccaccaaatagttgtt 14707246  T
Q  101 caaataacac 110  Q
    ||||||||||    
T  14707245 caaataacac 14707236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36885490 - 36885374
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgt 99  Q
    ||||||||||||||||| ||||| ||| |||||  |||||| ||  | || ||||||||||||| |||||| || |||||||||||   ||||| |||||    
T  36885490 atttttactttatctctttattgctttgattttcgtgtcaatacctactttttctttgtaaatt-atggttgtcccataagttgtccaccaaatggttgt 36885392  T
Q  100 tcaaataacacacctctt 117  Q
    ||||||||||| ||||||    
T  36885391 tcaaataacactcctctt 36885374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 7473027 - 7472920
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||||||||||||||| |||| ||||  ||  || ||  ||| ||||||||||||| ||||||||   | |||||||||  |||||||||||||    
T  7473027 tttttactttatctctctattgctttagttttcgtgcaaatacctatttttctttgtaaatt-atggttattctaaaagttgtcaaccaaatagttgttc 7472929  T
Q  102 aaataacac 110  Q
    |||||||||    
T  7472928 aaataacac 7472920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 40517328 - 40517444
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||| ||||||| ||||||| ||| |||||  |||||| |   | | |||||||||||||||||||| ||| ||||| ||||||| ||||  ||||||    
T  40517328 tttttattttatctttctattgctttgattttcgtgtcaatatctacttttctttgtaaatttatggttgtcttataagatgtcataaaaatgattgttc 40517427  T
Q  102 aaataacacacctcttt 118  Q
    |||||| |||| |||||    
T  40517428 aaataatacacatcttt 40517444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 6182347 - 6182405
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 109  Q
    |||||| ||||||||| ||| ||  |||| |||||||||||||||||||||||||||||    
T  6182347 ttctttataaatttattgttgtccaataaattgtcatacaaatagttgttcaaataaca 6182405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 30439507 - 30439394
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgtt-ctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  ||  || || |||| || ||||||||||| |||||| || |||||||| |||  ||||| ||||||    
T  30439507 tttttactttatctctctattgctttgattttcgtgcaaatactcattttttctttgtaaatt-atggttgtcacataagttatcaaccaaatggttgtt 30439409  T
Q  101 caaataacacacctc 115  Q
    |||||||||| ||||    
T  30439408 caaataacactcctc 30439394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 2621917 - 2621962
Alignment:
Q  68 gttatctcataagttgtcatacaaatagttgttcaaataacacacc 113  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||    
T  2621917 gttacctcataagttgtcatacaaatgattgttcaaataacacacc 2621962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13106549 - 13106666
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||| |||| ||||||||||| |||  ||||| |||||| ||   || |||||||||||||||||||| |   | |||||||||   |||| ||||||    
T  13106549 atttttgctttctctctctattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgtt 13106648  T
Q  101 caaataacacacctcttt 118  Q
    ||||||||||| ||||||    
T  13106649 caaataacacaactcttt 13106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 36969626 - 36969561
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    |||||||||||  ||||||| || |||||||||||| |||||| | ||||||||||||||| ||||    
T  36969626 ttctttgtaaaaatatggttgtcgcataagttgtcaaacaaatggatgttcaaataacacaactct 36969561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 39856119 - 39856232
Alignment:
Q  13 tctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    ||||||||||| ||| |||||| |||||| |   ||| |||||||| |||| ||| || ||| | ||||| ||||  ||||||||||||||||||||||     
T  39856119 tctctctattgctttgatttttgtgtcaatatctatttttctttgttaattcatgattgtcttaaaagttatcattaaaatagttgttcaaataacacaa 39856218  T
Q  113 ctctttaagaaaaa 126  Q
    ||||| || |||||    
T  39856219 ctcttgaaaaaaaa 39856232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37942908 - 37942868
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaa 41  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  37942908 atttttactttctctctctattgttttagtttttatgtcaa 37942868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 39211112 - 39211227
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtc-atacaaatagttgtt 100  Q
    |||||||||| |||||||||||||||  ||||| |||||| || |||  ||||||||| ||||| | || ||||| |||||||| | | ||||  |||||    
T  39211112 tttttactttttctctctattgttttggtttttgtgtcaatactcatatttctttgtatattta-gattgtctcacaagttgtcaacaaaaatgattgtt 39211210  T
Q  101 caaataacacacctctt 117  Q
    |||||||||| ||||||    
T  39211211 caaataacactcctctt 39211227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 22960420 - 22960305
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttc-tttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||| ||||| ||||||||| ||| | |||| |||||| || |||| ||| |||||||||  |||||| ||  |||||||||||  ||||| ||||||    
T  22960420 tttttattttatttctctattgctttgacttttgtgtcaatacccatttttcctttgtaaatcaatggttgtcaaataagttgtcaatcaaattgttgtt 22960321  T
Q  101 caaataacacacctct 116  Q
     |||||||||| ||||    
T  22960320 taaataacacatctct 22960305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 25018490 - 25018553
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||||||||||| || ||  |||| ||||| |||||||| ||||||||||||||||| ||||    
T  25018490 tttgtaaatttatgattgtcatataaattgtcttacaaataattgttcaaataacacacatctt 25018553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 144208 - 144150
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 109  Q
    ||||||||||||||||||||||| || || || ||||| |||| |||||| ||||||||    
T  144208 ttctttgtaaatttatggttatcacaaaaattatcatagaaatggttgttgaaataaca 144150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 36816617 - 36816508
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||| ||||||||||| ||| |||||| ||| || ||| |||| ||||||| ||| || || ||||| || ||||||||| | | |||| ||||    
T  36816617 tttttactttttctctctattgctttgatttttgtgttaatacgtcatt-ttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgtt 36816519  T
Q  101 caaataacaca 111  Q
    |||||||||||    
T  36816518 caaataacaca 36816508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 12735012 - 12734903
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    ||||||| |||||||| ||||  ||| |||||| |||||| ||  | | ||| |||||||||| | ||| || ||||| || ||||||||||  ||||||    
T  12735012 tttttaccttatctctatattactttgatttttgtgtcaatacctacttttcattgtaaatttttagttgtcacataaattatcatacaaattattgttc 12734913  T
Q  102 aaataacaca 111  Q
    ||||||||||    
T  12734912 aaataacaca 12734903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 39465614 - 39465675
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    |||||| ||| ||||||||| | ||| ||||||||  | |||||||||||||||||||||||    
T  39465614 ttctttataattttatggttgtttcaaaagttgtctcataaatagttgttcaaataacacac 39465675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 2455165 - 2455225
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||| || ||||||  ||||  |||| ||||||||||||| |||||||||||||||||    
T  2455165 ttctttgaaattttatgagtatccaataaattgtcatacaaattgttgttcaaataacaca 2455225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 14863264 - 14863308
Alignment:
Q  73 ctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||| ||||||||  |||||| |||||||||||||||||||||||    
T  14863264 ctcaaaagttgtcccacaaatggttgttcaaataacacacctctt 14863308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 22811461 - 22811405
Alignment:
Q  59 aaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    |||||||||||| ||| | | ||||||||||||||  ||||| ||||||||||||||    
T  22811461 aaatttatggttgtcttaaaggttgtcatacaaattattgtttaaataacacacctc 22811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 34084578 - 34084526
Alignment:
Q  54 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaata 106  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  34084578 tttgcaaatttatggttgtctcataagttgtcatacaaatagttgttcaaata 34084526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 31883302 - 31883189
Alignment:
Q  4 tttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaa 103  Q
    |||||||| ||||||||||| ||| |||||| |||||| ||   || ||||||||||| |||||||| || || || ||||||  |||||||||||||||    
T  31883302 tttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatagttgttcaa 31883203  T
Q  104 ataacacacctctt 117  Q
    |||| ||| |||||    
T  31883202 ataatacaactctt 31883189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 25127782 - 25127708
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaagaaaa 125  Q
    |||||||||||||||||||| || || || |||||  |||||| |||||||||||||||||||||| ||| ||||    
T  25127782 ttctttgtaaatttatggttgtcccagaatttgtcgcacaaatggttgttcaaataacacacctctataataaaa 25127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 26595419 - 26595536
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||| ||||||||||| |||  ||||| |||||| ||  |||| ||||||||||| || ||||| | ||| ||||||||||| |||| | ||||    
T  26595419 tttttactttctctctctattgctttggtttttgtgtcaatacctcatt-ttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgtt 26595517  T
Q  101 caaataacacacctcttta 119  Q
    ||||||||||| |||||||    
T  26595518 caaataacacaactcttta 26595536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 31749435 - 31749543
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaaca-cgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    ||||||||||||||||||||||||||||||||  ||| || | |   || ||||||||||| |||||||| |||| ||||||||||  |||||  |||||    
T  31749435 tttttactttatctctctattgttttaattttcgtgtaaatatctattttttctttgtaaa-ttatggttgtctcttaagttgtcaatcaaatgattgtt 31749533  T
Q  101 caaataacac 110  Q
    ||||||||||    
T  31749534 caaataacac 31749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 3552107 - 3552047
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||||||||||||| ||||| || ||||| |||| ||||| |||||||||||||||||    
T  3552107 ttctttgtaaatttatgattatcacaaaagttatcatccaaatggttgttcaaataacaca 3552047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 30945933 - 30945993
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||||||||| ||||||| |  |||||||| |||||||||| |||||||||||||||||    
T  30945933 ttctttgtaaatctatggttgttccataagttttcatacaaatggttgttcaaataacaca 30945993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 30956191 - 30956255
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    |||||||||||| ||||||| || |||||||| ||||| |||| ||||||||||||||| |||||    
T  30956191 ttctttgtaaatctatggttgtcccataagttttcatataaatggttgttcaaataacaaacctc 30956255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 17551379 - 17551271
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaa-cacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    ||||||||||||||||||||||||||  ||||| |||||| | | |||| |||||| ||||||| ||||| || || | | ||||||| |||||| ||||    
T  17551379 tttttactttatctctctattgttttggtttttgtgtcaatccctcatt-ttctttataaattt-tggttgtcacaaatgctgtcataaaaatagatgtt 17551282  T
Q  101 caaataacaca 111  Q
    |||||||||||    
T  17551281 caaataacaca 17551271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 33019104 - 33019039
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||| |||| |||| |||||| |||| |||| |||||||||||| |||||||||| |||||||    
T  33019104 ttctttgcaaatctatgattatcttataaattgttatacaaatagtttttcaaataactcacctct 33019039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 3832583 - 3832646
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    ||||||||||||| |||||| || ||||||||||||  ||||| |||||||||||||||| ||||    
T  3832583 ttctttgtaaatt-atggttgtcccataagttgtcaatcaaatggttgttcaaataacactcctc 3832646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 33656838 - 33656955
Alignment:
Q  3 ttttactttatctctctattgttttaatttttatgtcaacacgcat----tgttctttgtaaatttatggttatctcataagttgtcatacaaatagttg 98  Q
    ||||||||||||||||||||| |||  |||| ||||||| ||  ||    | || ||||||||||||||||| ||  |||| ||||||  ||||| ||||    
T  33656838 ttttactttatctctctattgcttttgttttcatgtcaaaacctatattattttttttgtaaatttatggttgtcaaataaattgtcaatcaaatggttg 33656937  T
Q  99 ttcaaataacacacctct 116  Q
    ||||||||||||| ||||    
T  33656938 ttcaaataacacatctct 33656955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 4820486 - 4820552
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    ||||||||||| || || || ||||| ||||| ||||  |||||||||||||||||||||| |||||    
T  4820486 ttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactctt 4820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 13143383 - 13143270
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  ||  || ||  | || ||||||||||||| |||||| || || |||||||||  ||||| ||||||    
T  13143383 tttttactttatctctctattgctttgattttcgtgcaaatacaaactttttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgtt 13143285  T
Q  101 caaataacacacctc 115  Q
    |||||||||| ||||    
T  13143284 caaataacactcctc 13143270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 16199569 - 16199635
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  16199569 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 16199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 30621859 - 30621917
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 109  Q
    |||||||||||| |||||||||  |||||||| |||  ||||| |||||||||||||||    
T  30621859 ttctttgtaaatatatggttattccataagttatcaatcaaatggttgttcaaataaca 30621917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 10826622 - 10826691
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 120  Q
    |||||||||||||  ||||| || || ||||| |||  ||||| |||||||||||||||||| |||||||    
T  10826622 ttctttgtaaattagtggttgtcacaaaagttatcactcaaatggttgttcaaataacacacttctttaa 10826691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 18141252 - 18141188
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||    
T  18141252 ttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaatggttgttcaaataacactcctct 18141188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 33195318 - 33195213
Alignment:
Q  4 tttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaa 103  Q
    |||| ||| ||| ||||||||||| |||||| |||||| ||  ||| ||||||| ||| |||||||| || || || |  ||| ||||||| ||||||||    
T  33195318 tttattttctctttctattgttttgatttttgtgtcaatacttatttttctttgaaaaattatggttgtcccaaaaatcttcagacaaataattgttcaa 33195219  T
Q  104 ataaca 109  Q
    ||||||    
T  33195218 ataaca 33195213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 2159257 - 2159197
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||||||||||||||||| |  |||||||| ||||||| ||  ||||| ||||||||||    
T  2159257 ttctttgtaaatttatggttgttccataagttatcatacacatgattgtttaaataacaca 2159197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 6531131 - 6531064
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 119  Q
    ||||||||||||| |||||| || ||| |||| |||  ||||| |||||||||||||||| ||||||||    
T  6531131 ttctttgtaaatt-atggttgtcccattagttatcaaccaaatggttgttcaaataacactcctcttta 6531064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 29639263 - 29639203
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||||||||| |||  |||| |||||  |||| |||||| |||||||||||||||||||    
T  29639263 ttctttgtaaatctataattatatcatatattgttatacaattagttgttcaaataacaca 29639203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 29642993 - 29642933
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||||||||| |||  |||| |||||  |||| |||||| |||||||||||||||||||    
T  29642993 ttctttgtaaatctataattatatcatatattgttatacaattagttgttcaaataacaca 29642933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 6178426 - 6178310
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| ||||||||||| ||| |||||| |||||| ||   || ||||||  |||||||||||| | ||  ||||||||||| |||| |||||||    
T  6178426 tttttactttctctctctattgctttgatttttgtgtcaataccactttttctttacaaatttatggttgtatcgaaagttgtcataaaaatggttgttc 6178327  T
Q  102 aaataacacacctcttt 118  Q
    |||||||||| ||||||    
T  6178326 aaataacacaactcttt 6178310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 37057058 - 37056943
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    ||||||||||||||||||||||||||  ||||| |||||| ||  |||| ||||||||||| |  ||||| ||||| ||||||||||| |||| | ||||    
T  37057058 tttttactttatctctctattgtttttgtttttgtgtcaatacctcatt-ttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgtt 37056960  T
Q  101 caaataacacacctctt 117  Q
    ||||||||||| |||||    
T  37056959 caaataacacaactctt 37056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 52564601 - 52564536
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 116  Q
    |||||||||||| ||||||| || |||||||||||||| |||| ||||||||||||||| ||||||    
T  52564601 ttctttgtaaatctatggttgtcccataagttgtcatagaaatggttgttcaaataacatacctct 52564536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 54007545 - 54007646
Alignment:
Q  15 tctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacct 114  Q
    |||||||| |||| |||||| |||||| |   ||| |||||| ||||||||||||| ||| ||||||||||||||| || || ||||||||||||| |||    
T  54007545 tctctattctttttatttttgtgtcaatatctatttttctttataaatttatggttgtcttataagttgtcatacagatggtcgttcaaataacacgcct 54007644  T
Q  115 ct 116  Q
    ||    
T  54007645 ct 54007646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 34627833 - 34627773
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||||||||||||||||| ||| ||||||| ||||| ||||| ||||||||||||||||    
T  34627833 ttctttgtaaatttatggttgtcttataagttatcataaaaataattgttcaaataacaca 34627773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 46966052 - 46965984
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 119  Q
    ||||||||||||||||| || ||  | ||||||||| |||||| |||||||||||||||||||||||||    
T  46966052 ttctttgtaaatttatgattgtccgaaaagttgtcacacaaatggttgttcaaataacacacctcttta 46965984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 11075321 - 11075270
Alignment:
Q  58 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 109  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  11075321 taaatttatggttgtctcaaaagttgtcatacaaatggttgttcaaataaca 11075270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 33256380 - 33256494
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||| |||||||||||||||||||||  |||  ||||||| || |||  || ||| ||||||||||||| ||  | ||||||||| |||||| |||||||    
T  33256380 ttttcactttatctctctattgttttggtttccatgtcaatacacatattt-tttataaatttatggttgtcctaaaagttgtcacacaaatggttgttc 33256478  T
Q  102 aaataacacacctctt 117  Q
    |||||||||| |||||    
T  33256479 aaataacacatctctt 33256494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 55361234 - 55361120
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||| ||||||||||| |||  ||||| |||||| ||  |||| ||||||||||||  |||||| || |||||||| |||| ||||||||||||    
T  55361234 tttttactttctctctctattgctttggtttttgtgtcaatacttcatt-ttctttgtaaatcaatggttgtcacataagttttcattcaaatagttgtt 55361136  T
Q  101 caaataacacacctct 116  Q
    ||||||| ||| ||||    
T  55361135 caaataaaacaactct 55361120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 819165 - 819091
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaagaaaa 125  Q
    ||||||||||||| ||| |||||||| ||||||||||  |||| |||||| |||||||||| ||||||| |||||    
T  819165 ttctttgtaaattaatgattatctcaaaagttgtcatcaaaatggttgtttaaataacacatctctttatgaaaa 819091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 11056878 - 11056825
Alignment:
Q  58 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||||||||| ||||| ||||||| |||||||| |||||||||||||||||    
T  11056878 taaatttatggttgtctcaaaagttgttatacaaatggttgttcaaataacaca 11056825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 27511844 - 27511904
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    |||||||||||||||||||| || || ||||||||| |||||| ||||||||||||||||||    
T  27511844 ttctttgtaaatttatggttgtc-caaaagttgtcacacaaattgttgttcaaataacacac 27511904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 50559212 - 50559104
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| ||||||||||||||| ||||||||  ||| || | || |||||| ||||||||||||| ||  | || || ||| | ||||||||||||    
T  50559212 tttttactttctctctctattgttttgatttttataccaatac-cttttttctttataaatttatggttgtcataaaaattatcacataaatagttgttc 50559114  T
Q  102 aaataacaca 111  Q
    ||||||||||    
T  50559113 aaataacaca 50559104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 46965961 - 46965893
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 119  Q
    ||||||||||||||||| || ||  | ||||||||| |||||| ||||||||||||||||| |||||||    
T  46965961 ttctttgtaaatttatgattgtcctaaaagttgtcacacaaattgttgttcaaataacacatctcttta 46965893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 12762691 - 12762581
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    ||||||| ||| ||||| ||||  ||| |||||| |||||| |   ||| |||||||||||||||||||| || ||||| |||||||  ||||  |||||    
T  12762691 atttttattttctctctttattactttgatttttgtgtcaataactatttttctttgtaaatttatggttgtcccataaattgtcatgtaaatgattgtt 12762592  T
Q  101 caaataacaca 111  Q
    |||||||||||    
T  12762591 caaataacaca 12762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 27718787 - 27718673
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||| ||||||||||||||||||| ||||| ||| ||| ||  | || | |||||||||||||||||| ||  ||| |||| |   ||||| ||||||    
T  27718787 tttttattttatctctctattgttttgattttcatgccaaaacctacttttcctttgtaaatttatggttgtcaaatatgttggctatcaaatggttgtt 27718688  T
Q  101 caaataacacacctc 115  Q
    |||||||||||||||    
T  27718687 caaataacacacctc 27718673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 29030756 - 29030694
Alignment:
Q  53 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    |||||||||||  ||| |||| || |||||||||  |||||||||||||||||||||||||||    
T  29030756 ctttgtaaattagtggctatcacaaaagttgtcactcaaatagttgttcaaataacacacctc 29030694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9158875 - 9158759
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaat-agttg 98  Q
    ||||||||||||||| |||||||||||  |||  |||| || ||  | || ||||||||||||| |||||| || ||||||||||||  ||||| |||||    
T  9158875 atttttactttatctatctattgttttggtttccatgtaaatacttactttttctttgtaaatt-atggttgtcacataagttgtcaaccaaattagttg 9158777  T
Q  99 ttcaaataacacacctct 116  Q
    |||||||||||| |||||    
T  9158776 ttcaaataacactcctct 9158759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 29573357 - 29573240
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttc-tttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  || ||| ||  | | ||| ||||||||||||||||| ||  |||| |||||   ||||| ||||||    
T  29573357 tttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataaattgtctatcaaatggttgtt 29573258  T
Q  101 caaataacacacctcttt 118  Q
    ||||||||| ||||||||    
T  29573257 caaataacatacctcttt 29573240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 38523237 - 38523346
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    ||||||||||| || | |||||||||  ||||| ||| || ||  ||| ||||||  ||||||||||||||  ||||| || || ||||||| |||||||    
T  38523237 tttttactttacctttttattgttttggtttttgtgttaatacatatttttctttaaaaatttatggttattccataaattatcgtacaaatggttgttc 38523336  T
Q  102 aaataacaca 111  Q
    ||||||||||    
T  38523337 aaataacaca 38523346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 48176852 - 48176735
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttct-ttgtaaatttatggttatctcataagttgtcatacaaatagttgt 99  Q
    ||||||||||||||||| | ||| |||||||||  |||||| ||  ||| || | ||||||||||||| || || ||||| || | || |||||| ||||    
T  48176852 atttttactttatctcttttttgctttaattttcgtgtcaatacttatttttttattgtaaatttatgattgtcgcataaattattatccaaataattgt 48176753  T
Q  100 tcaaataacacacctctt 117  Q
    |||||||||||| |||||    
T  48176752 tcaaataacacaactctt 48176735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 51465915 - 51465799
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgca-ttgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| ||| |||||  ||  || ||  | || ||||||||||||| |||||| || || |||||||||  ||||| ||||||    
T  51465915 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgtt 51465817  T
Q  101 caaataacacacctcttt 118  Q
    |||||||||| |||||||    
T  51465816 caaataacactcctcttt 51465799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 6093879 - 6093771
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| ||||||||||| |||  ||| | ||| || |  || | ||||||| |||| ||||||||||  ||||||||||| | |||||||| |||    
T  6093879 tttttactttctctctctattgctttggtttctgtgttaataaccacttttctttgaaaatatatggttatccaataagttgtcaaataaatagtttttc 6093780  T
Q  102 aaataacac 110  Q
    |||||||||    
T  6093779 aaataacac 6093771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 26645146 - 26645201
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataa 107  Q
    ||||||||||||| ||| ||||| ||||| ||||||| |||||||||||||||||||    
T  26645146 ttctttgtaaatt-atgattatcccataaattgtcatccaaatagttgttcaaataa 26645201  T

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Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 9311111 - 9311226
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||||||| |||| ||||||||||  ||||  |||||| ||  | | |||||| ||||| ||||||| || ||||||||||   ||||||  ||||||    
T  9311111 tttttactttctctccctattgttttggttttcgtgtcaatacctacttttctttttaaatatatggttgtcccataagttgttcaacaaatgattgttc 9311210  T
Q  102 aaataacacacctctt 117  Q
    |||||||||| |||||    
T  9311211 aaataacacaactctt 9311226  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 39629839 - 39629800
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaa 41  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  39629839 tttttactttctctctctattgttttgatttttatgtcaa 39629800  T

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Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 39697173 - 39697115
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacac 110  Q
    ||||||||||||| |||||| || || |||||||||  ||||||||||||||||||||||    
T  39697173 ttctttgtaaatt-atggttgtcccaaaagttgtcaatcaaatagttgttcaaataacac 39697115  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 45205403 - 45205462
Alignment:
Q  58 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||||||  || ||||| ||||||||| |||||| ||||||||||||| |||||||||    
T  45205403 taaatttataattgtctcaaaagttgtcacacaaatggttgttcaaataatacacctctt 45205462  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 6999301 - 6999355
Alignment:
Q  63 ttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||||| || ||||||||||||  ||||| |||||||||||||||| ||||||    
T  6999301 ttatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctctt 6999355  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 9719394 - 9719340
Alignment:
Q  57 gtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||| ||||||||||| || |||||||||  ||||| |||||||||||||||||    
T  9719394 gtaaaattatggttatcccaaaagttgtcaatcaaatggttgttcaaataacaca 9719340  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 21217631 - 21217697
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  21217631 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 21217697  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1436886 - 1436955
Alignment:
Q  1 atttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggtt 70  Q
    ||||||||||| |||||||||||||||| ||||| || ||||||  | | |||||||||||  |||||||    
T  1436886 atttttactttctctctctattgttttattttttgtgccaacacatacttttctttgtaaaaatatggtt 1436955  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 13348086 - 13348017
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 120  Q
    ||||||||||| || ||||| || || ||||||||||| |||| | ||||||||||||| | ||||||||    
T  13348086 ttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactctttaa 13348017  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 36121891 - 36122007
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaaca-cgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||||||||||||||| | | |||||| || ||| | | |||| |||||||||||  ||||||| ||  |||||||||||   || | ||||||    
T  36121891 tttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaa-atatggttgtcaaataagttgtcaccaaattggttgtt 36121989  T
Q  101 caaataacacacctcttt 118  Q
    |||||||||| |||||||    
T  36121990 caaataacactcctcttt 36122007  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 36412243 - 36412307
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatac-aaatagttgttcaaataacacacctc 115  Q
    ||||||||||||| |||||| || |||||||||||| || |||| |||||||||||||||| ||||    
T  36412243 ttctttgtaaatt-atggttgtcccataagttgtcaaaccaaatggttgttcaaataacactcctc 36412307  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 45754758 - 45754819
Alignment:
Q  51 ttctttgtaaattt-atggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||||||||||| |||||| ||| ||||||| |||  ||||| |||||||||||||||||    
T  45754758 ttctttgtaaattttatggttgtctaataagttatcaatcaaatggttgttcaaataacaca 45754819  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 46815857 - 46815741
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttc 101  Q
    |||||| ||||||||||||||| |||  ||||  |||||| |  |||| |||||| ||||||||| ||| ||||| || ||||||   |||| |||||||    
T  46815857 tttttattttatctctctattgctttggttttcgtgtcaatatccatt-ttctttataaatttatagttgtctcaaaaattgtcaccaaaatggttgttc 46815759  T
Q  102 aaataacacacctcttta 119  Q
    |||||| ||| |||||||    
T  46815758 aaataatacatctcttta 46815741  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 19150319 - 19150279
Alignment:
Q  3 ttttactttatctctctattgttttaatttttatgtcaaca 43  Q
    ||||||||| ||||||||||||||| |||||| ||||||||    
T  19150319 ttttactttctctctctattgttttgatttttgtgtcaaca 19150279  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 23155390 - 23155330
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||||||| ||||| |||||| | ||||| |||   ||||||||||||||||||||||    
T  23155390 ttctttgtaaaattatgattatcttaaaagttatcaattaaatagttgttcaaataacaca 23155330  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 23592577 - 23592637
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | |||||||||||||||    
T  23592577 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacaca 23592637  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 23600712 - 23600772
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | |||||||||||||||    
T  23600712 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacaca 23600772  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 35377082 - 35376967
Alignment:
Q  2 tttttactttatctctctattgttttaatttttatgtcaacacg-cattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgtt 100  Q
    |||||||||| | ||||||||| ||| |||||| || ||| ||  |||| ||||||||||| || ||||| || || ||||||||||  |||| | ||||    
T  35377082 tttttactttctttctctattgctttgatttttgtgccaatacatcatt-ttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgtt 35376984  T
Q  101 caaataacacacctctt 117  Q
    ||||||||||| |||||    
T  35376983 caaataacacaactctt 35376967  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 42889104 - 42889164
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 111  Q
    ||||||||||| || ||||||| ||| ||||||||||  |||||| |||| ||||||||||    
T  42889104 ttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacaca 42889164  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 46965870 - 46965806
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 115  Q
    |||||||||||||||||||| ||  | ||||||||| ||||||  | ||| ||||||||||||||    
T  46965870 ttctttgtaaatttatggttgtcctaaaagttgtcacacaaatgatcgtttaaataacacacctc 46965806  T

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Target: scaffold0141 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 12052 - 12117
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 117  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||| ||||||    
T  12052 ttctttgtaaatt-atggttgtcgcaaaagttgtcaaccaaatagttgttcaaataacactcctctt 12117  T

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Target: scaffold0095 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 22887 - 22826
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    |||||| ||| ||||||||| | ||| ||||||||  | |||||||||||||||||||||||    
T  22887 ttctttataattttatggttgtttcaaaagttgtctcataaatagttgttcaaataacacac 22826  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 213802 - 213741
Alignment:
Q  51 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 112  Q
    |||||| ||||||||||||| ||||| || |||||||  ||||  |||||||||||||||||    
T  213802 ttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacacac 213741  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 469581 - 469520
Alignment:
Q  58 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 119  Q
    ||||||||||||| |  || || || |||| ||||||||||||||||||||||| |||||||    
T  469581 taaatttatggtttttacaaaaattatcatccaaatagttgttcaaataacacaactcttta 469520  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 101731 - 101763
Alignment:
Q  122 aaaaagtagaaaaagaaaagaattaaataatat 154  Q
    ||||||||||||||||||||| |||||||||||    
T  101731 aaaaagtagaaaaagaaaagagttaaataatat 101763  T

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