View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11432_high_7 (Length: 214)
Name: NF11432_high_7
Description: NF11432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11432_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 51526266 - 51526420
Alignment:
| Q |
20 |
tgatactctaattcattcatttcggagcagatccaagtaaaacaagagtagcattaataattactaagttcaccagagagcaggtataatcaatcgacct |
119 |
Q |
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| T |
51526266 |
tgatactctaattcattcatttcggagcagatccaagtaaaacaagagtagc---aataattgctaagttcaccagagagcaggtataatcaatcgacct |
51526362 |
T |
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| Q |
120 |
tctttttccc-tttttcaaa-tccgaggtttgaataccaatcctttcatattgtaatg |
175 |
Q |
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| T |
51526363 |
tctttttcccatttttcaaattctgaggttcgaataccaatcctttcatattgtaatg |
51526420 |
T |
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