View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11432_low_3 (Length: 534)

Name: NF11432_low_3
Description: NF11432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11432_low_3
NF11432_low_3
[»] chr2 (4 HSPs)
chr2 (1-519)||(16078744-16079262)
chr2 (1-95)||(21943796-21943890)
chr2 (186-448)||(38969389-38969651)
chr2 (204-276)||(38906766-38906838)
[»] chr7 (5 HSPs)
chr7 (94-342)||(6230638-6230887)
chr7 (214-292)||(41448717-41448795)
chr7 (203-250)||(44163243-44163290)
chr7 (170-292)||(13767686-13767808)
chr7 (463-508)||(31053313-31053358)
[»] chr8 (1 HSPs)
chr8 (156-448)||(44682818-44683110)
[»] chr4 (3 HSPs)
chr4 (156-451)||(55351882-55352177)
chr4 (151-271)||(42112478-42112598)
chr4 (243-304)||(12883582-12883643)
[»] chr5 (2 HSPs)
chr5 (88-342)||(3679640-3679895)
chr5 (215-292)||(16648979-16649056)
[»] chr1 (4 HSPs)
chr1 (180-241)||(9075577-9075638)
chr1 (216-292)||(4864786-4864862)
chr1 (407-448)||(12170885-12170926)
chr1 (171-292)||(21970965-21971086)
[»] scaffold0263 (1 HSPs)
scaffold0263 (248-352)||(7877-7981)
[»] chr6 (1 HSPs)
chr6 (180-292)||(14457803-14457915)
[»] chr3 (1 HSPs)
chr3 (216-292)||(43075191-43075267)


Alignment Details
Target: chr2 (Bit Score: 466; Significance: 0; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 1 - 519
Target Start/End: Complemental strand, 16079262 - 16078744
Alignment:
Q  1 gcatttaagaggaccaccctgcccccaaggctaacatatttgttaccccatgaatttaacttgttcttcaaactctcaaatagaggctcccaagttgtca 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16079262 gcatttaagaggaccaccctacccccaaggctaacatatttgttacccgatgaatttaacttgttcttcaaactctcaaatagaggctcccaagttgtca 16079163  T
Q  101 atcttctaggatttgcttctaccggcaaacccaaataaatgaacg-tataaaaccctccctacaatttatgaaattacatgccatatccataaattccct 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16079162 atcttctaggatttgcttctaccggcaaacccaaataaatgaacggtataaaaccctcccgacaatttatgaaattacatgccatatccataaattccct 16079063  T
Q  200 accaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatgcctttaaagtccattaatta 299  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16079062 accaacattaatcccaatcaaacaactcttcaaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatgcctttaaagtccattaatta 16078963  T
Q  300 tccacactagcctcccctagacaaagtgtgtcatcggcatattaaagatgagataccaccaacccattgttcccaacttcaaagccttaaaaagaatttg 399  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16078962 tccacactagcctcccctagacaaagtgtgtcatcggcatattgaagatgagataccaccaacccattgttcccaacttcaaagccttaaaaagaatttg 16078863  T
Q  400 aactcacagcattcctcattagaccggtaaaatcttccgccaccaaaaggaacnnnnnnnggcgccaatggatccccttgttttaagcctctttggatac 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  16078862 aactcacagcattcctcattagaccggtaaaatcttccgccaccaaaaggaac-aaaaaaggcgccaatggatccccttgttttaagcctctttggatac 16078764  T
Q  500 taatttcctccgttggagtt 519  Q
    ||||||||||||||||||||    
T  16078763 taatttcctccgttggagtt 16078744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 21943796 - 21943890
Alignment:
Q  1 gcatttaagaggaccaccctgcccccaaggctaacatatttgttaccccatgaatttaacttgttcttcaaactctcaaatagaggctcccaagt 95  Q
    ||||||||||| ||||||| ||| ||||||||||||| ||| || |||||||| |||||||| ||| |||||||||| || | ||||||||||||    
T  21943796 gcatttaagagaaccacccggcctccaaggctaacatgtttattcccccatgagtttaacttattcctcaaactctccaacaaaggctcccaagt 21943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 448
Target Start/End: Complemental strand, 38969651 - 38969389
Alignment:
Q  186 tccataaattccctaccaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatgccttta 285  Q
    |||||||| ||||| |||||||| | |||||||||||||||||| | |||||| || || |   || |  ||||||||||||||||||| || ||||| |    
T  38969651 tccataaactcccttccaacattcaccccaatcaaacaactctttgcaaaattaacttttagctccgaagccatctcaaaacctctaagtaacgccttga 38969552  T
Q  286 aagtccattaattatccacactagcctcccctagacaaagtgtgtcatcggcatattaaagatgagataccaccaacccattgttcccaacttcaaagcc 385  Q
      |||||   ||||||||||   ||||||||||  ||||| ||  |||||||||||| ||| || || ||||| |  ||||| ||||  |  ||||| ||    
T  38969551 gtgtccaaagattatccacatacgcctcccctatgcaaagcgtaacatcggcatattgaaggtgcgacaccactagtccattattcctcaaatcaaaacc 38969452  T
Q  386 ttaaaaagaatttgaactcacagcattcctcattagaccggtaaaatcttccgccaccaaaag 448  Q
     | ||||||  | ||| | || ||||||||||| || ||| ||||  ||||||||||||||||    
T  38969451 cttaaaagagctagaattaacggcattcctcatgagtccgctaaatccttccgccaccaaaag 38969389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 38906838 - 38906766
Alignment:
Q  204 acattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagca 276  Q
    ||||||||||| ||||| ||||| ||  |||||||||||||||||||  | ||||| ||||| ||||||||||    
T  38906838 acattaatccccatcaagcaacttttataaaaattcaccttcaaaccagaaaccatttcaaaccctctaagca 38906766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 94 - 342
Target Start/End: Complemental strand, 6230887 - 6230638
Alignment:
Q  94 gttgtcaatcttctaggatttgcttctaccggcaaacccaaataaatgaacgtataaaaccct-ccctacaatttatgaaattacatgccatatccataa 192  Q
    |||| ||||||||| ||||||||  ||| |||||||||||||||  |||||| |   |  ||| |||||||||| |  ||||| || |||  ||||||||    
T  6230887 gttgacaatcttctcggatttgcccctatcggcaaacccaaatacttgaacggaagcattccttccctacaattcaaaaaattgcacgccgcatccataa 6230788  T
Q  193 attccctaccaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatgcctttaaagtcca 292  Q
    | |||||||||||||| | ||||||||| |||||||||| |||||| || ||||| ||| | ||||||||||||||||| || || ||||| | ||||||    
T  6230787 actccctaccaacattcaccccaatcaagcaactcttcgcaaaattaactttcaaccccgataccatctcaaaacctcttagtaaagccttaagagtcca 6230688  T
Q  293 ttaattatccacactagcctcccctagacaaagtgtgtcatcggcatatt 342  Q
    | ||||||||||  | ||||||||||  |||||||| |||||||||||||    
T  6230687 taaattatccacggttgcctcccctatgcaaagtgtatcatcggcatatt 6230638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 41448795 - 41448717
Alignment:
Q  214 caatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatgcctttaaagtcca 292  Q
    ||||||||||||| ||||||||||| |||||||||||| |  || |||||||||||  ||||||  | |||||||||||    
T  41448795 caatcaaacaacttttcgaaaaattaaccttcaaacccgaagccttctcaaaaccttgaagcaaaacttttaaagtcca 41448717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 44163290 - 44163243
Alignment:
Q  203 aacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacc 250  Q
    |||||||| |||||||||||||||||||| |||||| | |||||||||    
T  44163290 aacattaaccccaatcaaacaactcttcgcaaaattaatcttcaaacc 44163243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 292
Target Start/End: Original strand, 13767686 - 13767808
Alignment:
Q  170 gaaattacatgccatatccataaattccctaccaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacct 269  Q
    ||||||||||| |||  |||||||||||    |||||||||| || ||||||||||||||  ||||||| || ||||| ||  |   ||||||||||||     
T  13767686 gaaattacatgtcattcccataaattccggctcaacattaatacccatcaaacaactcttgaaaaaattgactttcaacccggatgtcatctcaaaaccc 13767785  T
Q  270 ctaagcaatgcctttaaagtcca 292  Q
    |||||||| || || ||||||||    
T  13767786 ctaagcaaagctttcaaagtcca 13767808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 31053358 - 31053313
Alignment:
Q  463 gccaatggatccccttgttttaagcctctttggatactaatttcct 508  Q
    ||||| ||||| ||||||||||| ||||||||||||| ||||||||    
T  31053358 gccaaaggatcaccttgttttaaacctctttggatacaaatttcct 31053313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 156 - 448
Target Start/End: Complemental strand, 44683110 - 44682818
Alignment:
Q  156 tccctacaatttatgaaattacatgccatatccataaattccctaccaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaaga 255  Q
    ||||||||||| || ||||| || |||  ||||||||| |||||||||||||| |  || |||||||||||||| | |||||| |||||||| ||| |      
T  44683110 tccctacaattcataaaattgcacgccgcatccataaactccctaccaacattcactccgatcaaacaactcttagcaaaattaaccttcaaccccgaag 44683011  T
Q  256 ccatctcaaaacctctaagcaatgcctttaaagtccattaattatccacactagcctcccctagacaaagtgtgtcatcggcatattaaagatgagatac 355  Q
    |||| ||||||||||| | ||| ||||| |  |||||| | ||||||||   ||||||||||| || ||| || |||||||||||||  |||||||| ||    
T  44683010 ccatttcaaaacctcttaacaaagccttaagggtccataagttatccacggaagcctcccctatacgaagcgtatcatcggcatattggagatgagacac 44682911  T
Q  356 caccaacccattgttcccaacttcaaagccttaaaaagaatttgaactcacagcattcctcattagaccggtaaaatcttccgccaccaaaag 448  Q
    ||| |  ||||| |||| ||  |||||||| |  ||||| || ||  | | ||||||||||||||  ||  ||||| ||||||||||||||||    
T  44682910 cactaggccattattcctaaaatcaaagcccttgaaagagttggagttgatagcattcctcattaagccactaaaaccttccgccaccaaaag 44682818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 451
Target Start/End: Complemental strand, 55352177 - 55351882
Alignment:
Q  156 tccctacaatttatgaaattacatgccatatccataaattccctaccaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaaga 255  Q
    ||||||||||| || ||||| || |||   |||||||| |||||  | ||||| |  |||||||| |||||||| | ||| || |||||||| ||| | |    
T  55352177 tccctacaattcataaaattgcacgccgcctccataaactccctttctacattcactccaatcaagcaactcttggcaaagttaaccttcaaccccgaca 55352078  T
Q  256 ccatctcaaaacctctaagcaatgcctttaaagtccattaattatccacactagcctcccctagacaaagtgtgtcatcggcatattaaagatgagatac 355  Q
     ||||||||||| |||||| || ||||||| ||||||   ||| |||||    |||||||| | |||||| |||||||||||||||| ||| || |||||    
T  55352077 tcatctcaaaacatctaagtaacgcctttagagtccaaagattctccacggacgcctccccaatacaaagagtgtcatcggcatattgaaggtgtgatac 55351978  T
Q  356 caccaacccattgttcccaacttcaaagccttaaaaagaatttgaactcacagcattcctcattagaccggtaaaatcttccgccaccaaaaggaa 451  Q
    ||| |  ||||| |||| ||  ||||| |||| ||||||||| ||| | ||||||||||||||||  ||  ||||  |||||||||||||| ||||    
T  55351977 cacaaggccattattcctaaaatcaaaacctttaaaagaattggaattaacagcattcctcattaagccactaaatccttccgccaccaaagggaa 55351882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 271
Target Start/End: Original strand, 42112478 - 42112598
Alignment:
Q  151 aaccctccctacaatttatgaaattacatgccatatccataaattccctaccaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacc 250  Q
    |||| ||||||||||| || ||||| || |||  ||||||||| |||||||||||||| |  || |||||||||||||| | |||||| |||||||| ||    
T  42112478 aaccttccctacaattcataaaattgcacgccgcatccataaactccctaccaacattcactcctatcaaacaactcttagcaaaattaaccttcaaccc 42112577  T
Q  251 caagaccatctcaaaacctct 271  Q
    | |  |||| |||||||||||    
T  42112578 cgaagccatttcaaaacctct 42112598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 12883643 - 12883582
Alignment:
Q  243 ttcaaacccaagaccatctcaaaacctctaagcaatgcctttaaagtccattaattatccac 304  Q
    ||||||||||| | ||||||||||||||||||||| ||||| || |||||| |||| |||||    
T  12883643 ttcaaacccaacatcatctcaaaacctctaagcaacgccttcaatgtccataaattttccac 12883582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 342
Target Start/End: Original strand, 3679640 - 3679895
Alignment:
Q  88 tcccaagttgtcaatcttctaggatttgcttctaccggcaaacccaaataaatgaacg-tataaaaccctccctacaatttatgaaattacatgccatat 186  Q
    ||||| |||| ||| ||||| ||||||||| | ||||| || ||||||||  |||| | || | |||| ||||||||||| || ||||| || |||   |    
T  3679640 tcccatgttgacaaccttctcggatttgctccaaccggtaagcccaaatatttgaagggtagagaaccttccctacaattcataaaattgcaagccgcct 3679739  T
Q  187 ccataaattccctaccaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatgcctttaa 286  Q
    ||||| | || ||||||||||| | |||||||||||||||||| | |||||| || || | |||| | ||||||||||| |||||||| |  ||| | |     
T  3679740 ccatacactctctaccaacattcaccccaatcaaacaactctttgcaaaatttacttttagacccgaaaccatctcaaagcctctaagaagagccatgag 3679839  T
Q  287 agtccattaattatccacactagcctcccctagacaaagtgtgtcatcggcatatt 342  Q
    ||||||| ||||||| ||    ||||||||||  ||||| ||||||||| ||||||    
T  3679840 agtccataaattatcaacggacgcctcccctatgcaaagcgtgtcatcgacatatt 3679895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 16649056 - 16648979
Alignment:
Q  215 aatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatgcctttaaagtcca 292  Q
    |||||||||||| |||| |||||| |||||||||||| |  || |||||||||||  |||||| || |||||||||||    
T  16649056 aatcaaacaacttttcgcaaaattaaccttcaaacccgaagccttctcaaaaccttgaagcaaagcttttaaagtcca 16648979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 9075577 - 9075638
Alignment:
Q  180 gccatatccataaattccctaccaacattaatcccaatcaaacaactcttcgaaaaattcac 241  Q
    |||||||||||||| || |||  |||||| |||||||||||||||||||||||||| |||||    
T  9075577 gccatatccataaaatctctaggaacatttatcccaatcaaacaactcttcgaaaagttcac 9075638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 4864786 - 4864862
Alignment:
Q  216 atcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatgcctttaaagtcca 292  Q
    ||||||||||||||  |||||||||||||||| ||| | ||||||||||| ||||||| ||| ||||| || |||||    
T  4864786 atcaaacaactcttacaaaaattcaccttcaatcccgaaaccatctcaaaccctctaaacaaggccttcaacgtcca 4864862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 12170926 - 12170885
Alignment:
Q  407 agcattcctcattagaccggtaaaatcttccgccaccaaaag 448  Q
    |||||||||||||| |||| ||||| ||||||||||||||||    
T  12170926 agcattcctcattaaaccgctaaaaccttccgccaccaaaag 12170885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 292
Target Start/End: Complemental strand, 21971086 - 21970965
Alignment:
Q  171 aaattacatgccatatccataaattccctaccaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctc 270  Q
    |||||||| |||||||||||||| |||    | ||||||||||| ||||||||||| ||  ||||||| ||||||||  |  |  |||| |||||||| |    
T  21971086 aaattacaagccatatccataaactccggtgccacattaatccccatcaaacaacttttgaaaaaattaaccttcaactcggaagccatttcaaaacccc 21970987  T
Q  271 taagcaatgcctttaaagtcca 292  Q
    |||||||  |||| ||||||||    
T  21970986 taagcaaaaccttcaaagtcca 21970965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 352
Target Start/End: Original strand, 7877 - 7981
Alignment:
Q  248 acccaagaccatctcaaaacctctaagcaatgcctttaaagtccattaattatccacactagcctcccctagacaaagtgtgtcatcggcatattaaaga 347  Q
    |||| |||||||||||||||| || | ||| ||||| ||||||||   ||| || |||||||| || || | ||||||||||||||| ||||||| ||||    
T  7877 acccgagaccatctcaaaacccctcaacaacgccttcaaagtccaaagattctctacactagcttcaccgatacaaagtgtgtcatccgcatattgaaga 7976  T
Q  348 tgaga 352  Q
    |||||    
T  7977 tgaga 7981  T

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Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 292
Target Start/End: Complemental strand, 14457915 - 14457803
Alignment:
Q  180 gccatatccataaattccctaccaacattaatcccaatcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatg 279  Q
    |||||||||||||||||| |  | |||||||| || ||||||||||||||  ||||||| |||||||| ||  |  |||||||||| ||||| ||||| |    
T  14457915 gccatatccataaattccgtcgccacattaattcccatcaaacaactcttataaaaattaaccttcaatccggatgccatctcaaagcctcttagcaaag 14457816  T
Q  280 cctttaaagtcca 292  Q
    | || ||||||||    
T  14457815 ctttcaaagtcca 14457803  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 43075191 - 43075267
Alignment:
Q  216 atcaaacaactcttcgaaaaattcaccttcaaacccaagaccatctcaaaacctctaagcaatgcctttaaagtcca 292  Q
    ||||||||||||||  ||||||||||||| || ||  |  |||||||||| ||||||||||| ||||| ||||||||    
T  43075191 atcaaacaactcttataaaaattcacctttaacccggaagccatctcaaagcctctaagcaaagccttcaaagtcca 43075267  T

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