View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11432_low_7 (Length: 253)
Name: NF11432_low_7
Description: NF11432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11432_low_7 |
 | |
|
| [»] chr3 (29 HSPs) |
| |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 9838794 - 9839029
Alignment:
| Q |
18 |
agacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagtt |
117 |
Q |
| |
|
||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838794 |
agacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagtt |
9838893 |
T |
|
| Q |
118 |
caacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838894 |
caacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacat |
9838993 |
T |
|
| Q |
218 |
gggatagcaataatcttgatgtacttcgagttgcgt |
253 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9838994 |
gggatagcaataatcttgatgtccttcgagttgcgt |
9839029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 9849672 - 9849907
Alignment:
| Q |
18 |
agacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagtt |
117 |
Q |
| |
|
||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849672 |
agacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagtt |
9849771 |
T |
|
| Q |
118 |
caacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849772 |
caacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacat |
9849871 |
T |
|
| Q |
218 |
gggatagcaataatcttgatgtacttcgagttgcgt |
253 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9849872 |
gggatagcaataatcttgatgtccttcgagttgcgt |
9849907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 10375988 - 10375746
Alignment:
| Q |
11 |
cagagacagacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatga |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10375988 |
cagagacagacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcacaacttgtttacaatgatga |
10375889 |
T |
|
| Q |
111 |
agaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcc |
210 |
Q |
| |
|
| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375888 |
aaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttca |
10375789 |
T |
|
| Q |
211 |
ataacatgggatagcaataatcttgatgtacttcgagttgcgt |
253 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10375788 |
agaacatgggatagcaataatcttgatgtccttcgagttgcgt |
10375746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 10184175 - 10184407
Alignment:
| Q |
18 |
agacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagtt |
117 |
Q |
| |
|
||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
10184175 |
agacacaacccataatgctataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaatgataaagaagtt |
10184274 |
T |
|
| Q |
118 |
caacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| | |
|
|
| T |
10184275 |
caacaacattttgatatgagggcgtgggcttgtgtgtccgaggattttgatattatgagagtaaccaagtctctccttgaatctgtcacttccacaactt |
10184374 |
T |
|
| Q |
218 |
gggatagcaataatcttgatgtacttcgagttg |
250 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
10184375 |
gggatagcaataatcttgatgtccttcgagttg |
10184407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 10126861 - 10127096
Alignment:
| Q |
18 |
agacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagtt |
117 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10126861 |
agacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagtt |
10126960 |
T |
|
| Q |
118 |
caacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacat |
217 |
Q |
| |
|
||||||||||||||| ||| ||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||| | |
|
|
| T |
10126961 |
caacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttccacaactt |
10127060 |
T |
|
| Q |
218 |
gggatagcaataatcttgatgtacttcgagttgcgt |
253 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10127061 |
gggatagcaataatcttgatgtccttcgagttgcgt |
10127096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 10031936 - 10032168
Alignment:
| Q |
18 |
agacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagtt |
117 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10031936 |
agacgcatcccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagtt |
10032035 |
T |
|
| Q |
118 |
caacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacat |
217 |
Q |
| |
|
||||||||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||| | |
|
|
| T |
10032036 |
caacaacattttgatttgaaggcctgggcttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttccacaactt |
10032135 |
T |
|
| Q |
218 |
gggatagcaataatcttgatgtacttcgagttg |
250 |
Q |
| |
|
||||||||| |||||||||| |||||||||| |
|
|
| T |
10032136 |
cggatagcaaagatcttgatgtccttcgagttg |
10032168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 10663459 - 10663691
Alignment:
| Q |
18 |
agacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagtt |
117 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10663459 |
agacacaacccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagtt |
10663558 |
T |
|
| Q |
118 |
caacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacat |
217 |
Q |
| |
|
||||||||||||||| ||| ||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||| | |
|
|
| T |
10663559 |
caacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttccacaactt |
10663658 |
T |
|
| Q |
218 |
gggatagcaataatcttgatgtacttcgagttg |
250 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| |
|
|
| T |
10663659 |
gggatagcaaagatcttgatgtccttcgagttg |
10663691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 28 - 250
Target Start/End: Complemental strand, 10434170 - 10433948
Alignment:
| Q |
28 |
cataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacatt |
127 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
10434170 |
cataataagataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccatt |
10434071 |
T |
|
| Q |
128 |
ttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaa |
227 |
Q |
| |
|
||||| ||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
10434070 |
ttgatttgaaggcctgggcttgtgtgtctcaggattttgatattttgaaagtaaccaagtctctccttgaatcggtcacttccagaacttgggatagcaa |
10433971 |
T |
|
| Q |
228 |
taatcttgatgtacttcgagttg |
250 |
Q |
| |
|
|||||||||||| ||||| |||| |
|
|
| T |
10433970 |
taatcttgatgtccttcgtgttg |
10433948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 10580544 - 10580766
Alignment:
| Q |
28 |
cataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacatt |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10580544 |
cataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacatt |
10580643 |
T |
|
| Q |
128 |
ttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaa |
227 |
Q |
| |
|
|||| |||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||| | ||| ||||| |
|
|
| T |
10580644 |
ttgacatgaaggcgtgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttccacaacttcggaaagcaa |
10580743 |
T |
|
| Q |
228 |
taatcttgatgtacttcgagttg |
250 |
Q |
| |
|
|||||||||||| ||||| |||| |
|
|
| T |
10580744 |
taatcttgatgtccttcgtgttg |
10580766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 10260644 - 10260863
Alignment:
| Q |
31 |
aataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttg |
130 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10260644 |
aataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaatgataaagaagttcaacaacattttg |
10260743 |
T |
|
| Q |
131 |
atatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataa |
230 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | || ||||||| |||||| |
|
|
| T |
10260744 |
acatgaaggcgtgggcttgtgtgtctgaggattttgatattatgagagtaaccaagtctctccttgaatcagtcacttctagaaattgggatatcaataa |
10260843 |
T |
|
| Q |
231 |
tcttgatgtacttcgagttg |
250 |
Q |
| |
|
|||||| | |||||||||| |
|
|
| T |
10260844 |
tcttgacatccttcgagttg |
10260863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 11769177 - 11769399
Alignment:
| Q |
28 |
cataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacatt |
127 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||| |
|
|
| T |
11769177 |
cataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtctacaatgataaagaagttcaacaatatt |
11769276 |
T |
|
| Q |
128 |
ttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaa |
227 |
Q |
| |
|
||||| ||| ||| |||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| ||||||||||| |
|
|
| T |
11769277 |
ttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaaccaggtctctccttgaatcggtcacttcaagaacttgggatagcaa |
11769376 |
T |
|
| Q |
228 |
taatcttgatgtacttcgagttg |
250 |
Q |
| |
|
|||||||||| | |||||||||| |
|
|
| T |
11769377 |
taatcttgatatccttcgagttg |
11769399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 31 - 250
Target Start/End: Complemental strand, 10363921 - 10363702
Alignment:
| Q |
31 |
aataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttg |
130 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10363921 |
aataatataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttg |
10363822 |
T |
|
| Q |
131 |
atatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataa |
230 |
Q |
| |
|
|| ||| ||| |||| |||||| |||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||| | ||| |||||||| |
|
|
| T |
10363821 |
atttgaaggcatgggtttgtgtctctgaggattttgatattatgagagtaacaaagtctctccttgaatctgccacttccataacttcggaaagcaataa |
10363722 |
T |
|
| Q |
231 |
tcttgatgtacttcgagttg |
250 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
10363721 |
tcttgatgtccttcgagttg |
10363702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 10088736 - 10088955
Alignment:
| Q |
31 |
aataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttg |
130 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
10088736 |
aataatataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttg |
10088835 |
T |
|
| Q |
131 |
atatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataa |
230 |
Q |
| |
|
|| ||| ||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | ||| | |||||||||| | |
|
|
| T |
10088836 |
atttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatga |
10088935 |
T |
|
| Q |
231 |
tcttgatgtacttcgagttg |
250 |
Q |
| |
|
||||| ||| |||| ||||| |
|
|
| T |
10088936 |
tcttggtgtccttcaagttg |
10088955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 10195619 - 10195838
Alignment:
| Q |
31 |
aataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttg |
130 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
10195619 |
aataatataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttg |
10195718 |
T |
|
| Q |
131 |
atatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataa |
230 |
Q |
| |
|
|| ||| ||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | ||| | |||||||||| | |
|
|
| T |
10195719 |
atttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatga |
10195818 |
T |
|
| Q |
231 |
tcttgatgtacttcgagttg |
250 |
Q |
| |
|
||||| ||| |||| ||||| |
|
|
| T |
10195819 |
tcttggtgtccttcaagttg |
10195838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 10077212 - 10077434
Alignment:
| Q |
28 |
cataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacatt |
127 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | | |||| |
|
|
| T |
10077212 |
cataataagataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgattataaagttcgataccatt |
10077311 |
T |
|
| Q |
128 |
ttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaa |
227 |
Q |
| |
|
||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||| ||||||| ||| |
|
|
| T |
10077312 |
ttgatttgcaggcatgggcttgtgtgtctgaggattttgatattatgagagtaaccaagtctctccttgaatcgatcacttctagaacttgggataacaa |
10077411 |
T |
|
| Q |
228 |
taatcttgatgtacttcgagttg |
250 |
Q |
| |
|
| |||||||||| |||||||||| |
|
|
| T |
10077412 |
tgatcttgatgtccttcgagttg |
10077434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 250
Target Start/End: Complemental strand, 11131151 - 11130930
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | |||||||| |||||||| ||| ||| ||||||||||||| |||||||| |||| || |
|
|
| T |
11131151 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaaagttcaagaacactt |
11131052 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaat |
228 |
Q |
| |
|
|||| | | || ||||||||||| || ||||||||||||||||| |||||||| || ||||||||||||| |||||||| | | ||||| | |||| |
|
|
| T |
11131051 |
tgatctcaaagcatgggcttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaatctgtcacttcaagggcttgggaaaacaat |
11130952 |
T |
|
| Q |
229 |
aatcttgatgtacttcgagttg |
250 |
Q |
| |
|
||||||||| | |||||||||| |
|
|
| T |
11130951 |
aatcttgattttcttcgagttg |
11130930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 250
Target Start/End: Complemental strand, 11148979 - 11148758
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | |||||||| |||||||| ||| ||| ||||||||||||| |||||||| |||| || |
|
|
| T |
11148979 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaaagttcaagaacactt |
11148880 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaat |
228 |
Q |
| |
|
|||| | | || ||||||||||| || ||||||||||||||||| |||||||| || ||||||||||||| |||||||| | | ||||| | |||| |
|
|
| T |
11148879 |
tgatctcaaagcatgggcttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaatctgtcacttcaagggcttgggaaaacaat |
11148780 |
T |
|
| Q |
229 |
aatcttgatgtacttcgagttg |
250 |
Q |
| |
|
||||||||| | |||||||||| |
|
|
| T |
11148779 |
aatcttgattttcttcgagttg |
11148758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 10527281 - 10527452
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| ||||||||| | || ||||| |||||||| ||||||||||||||||||||| | ||| |||| ||||| |
|
|
| T |
10527281 |
ataataatttaggtgttgttgcaatcttgggtatgggaggtgtcggtaaaacaacccttgcacaacttgtttacaatgatgaaaaggttgaacaccattt |
10527380 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
200 |
Q |
| |
|
|||| | | ||| |||| || ||| || |||||||| ||| || |||||||||||||||||||| ||||||| |
|
|
| T |
10527381 |
tgatctcaaggcctgggtttatgtatcagaggatttcgatgttgtgagagtaaccaagtctctcattgaatc |
10527452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 250
Target Start/End: Complemental strand, 11160142 - 11159921
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||| |||||||| |||||||||||||| || ||||||||| | || ||||| || ||||| ||||||||||||||| ||||| |||||||| | ||||| |
|
|
| T |
11160142 |
ataacaatataggcgttgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaataatgaaaaagttcaagatcattt |
11160043 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaat |
228 |
Q |
| |
|
|||| | | || ||||||||||| |||||||||||||||||||| ||||| || |||| |||||||| |||||||| | | | ||||| | |||| |
|
|
| T |
11160042 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttatctgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaccaat |
11159943 |
T |
|
| Q |
229 |
aatcttgatgtacttcgagttg |
250 |
Q |
| |
|
||||||||| | |||||||||| |
|
|
| T |
11159942 |
aatcttgattttcttcgagttg |
11159921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 250
Target Start/End: Original strand, 8861230 - 8861451
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| ||||||||||||||||||||| |||||||| | || || |
|
|
| T |
8861230 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
8861329 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaat |
228 |
Q |
| |
|
|||| | | || ||||||||||| || |||||||||||||||| | ||||| || |||| |||||||| |||||||| | | | ||||| | |||| |
|
|
| T |
8861330 |
tgatctcaaagcatgggcttgtgtatcagaggattttgatatttcaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
8861429 |
T |
|
| Q |
229 |
aatcttgatgtacttcgagttg |
250 |
Q |
| |
|
||||||||| | |||||||||| |
|
|
| T |
8861430 |
aatcttgattttcttcgagttg |
8861451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 250
Target Start/End: Original strand, 10889250 - 10889471
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| ||||||||||||||||||||| |||||||| | || || |
|
|
| T |
10889250 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
10889349 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaat |
228 |
Q |
| |
|
|||| | | || ||||||||||| |||||||||||||||||||| | ||||| || |||| |||||||| || ||||| | | | ||||| | |||| |
|
|
| T |
10889350 |
tgatctcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtgacttcaagagcttgggaaaacaat |
10889449 |
T |
|
| Q |
229 |
aatcttgatgtacttcgagttg |
250 |
Q |
| |
|
||||| ||| | |||||||||| |
|
|
| T |
10889450 |
aatctagattttcttcgagttg |
10889471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 10517408 - 10517579
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||||||| ||||||||| ||||||| |||| |||||||| | || ||||| |||||||| || ||||||||||||||| | ||||| |||||||||| |
|
|
| T |
10517408 |
ataataatttaggtgttgctgcaattgtgggtatgggaggcgtcggtaaaacgacccttgcacagtttgtttacaatgatgcaaaagttgaacaacattt |
10517507 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
200 |
Q |
| |
|
|||| | | || |||| |||||| ||||||||||||||| || | |||| |||||||||| |||||||||| |
|
|
| T |
10517508 |
tgatttcaaagcctgggtttgtgtatctgaggattttgatgttattagagcaaccaagtctatccttgaatc |
10517579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 11782128 - 11781957
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||||||| |||||||||| ||||||||||| |||||||| | || ||||| |||||||| || |||||||||||||||| ||||| |||||||||| |
|
|
| T |
11782128 |
ataataatttaggtgttgtcgcaattttgggtatgggaggcgtcggtaaaacgacccttgcacagcttgtttacaatgatgtgaaagttgaacaacattt |
11782029 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
200 |
Q |
| |
|
|||| | | | |||| |||||| || |||||||| ||| || | ||| |||||||||||||||||||||| |
|
|
| T |
11782028 |
tgatttcaaagtctgggtttgtgtatcggaggatttcgatgttgttagaataaccaagtctctccttgaatc |
11781957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 10500500 - 10500671
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||| | || ||||| || ||||| |||||||||||||| || || || || || ||||||| |
|
|
| T |
10500500 |
ataataatttaggtgttgttgcaattttgggtatgggaggcgtcggtaaaacaacacttgctcaacttgtttacaacgacgataaaattgaagaacattt |
10500599 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
200 |
Q |
| |
|
|||| ||| ||| ||| |||||| | |||||||| ||| || ||||| ||||||| |||||||||||||| |
|
|
| T |
10500600 |
tgatctgaaggcatggatttgtgtaccggaggatttcgatgttgtgagaataaccaaatctctccttgaatc |
10500671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 13160935 - 13161077
Alignment:
| Q |
40 |
ggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgaggg |
139 |
Q |
| |
|
||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |
|
|
| T |
13160935 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13161034 |
T |
|
| Q |
140 |
cgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
182 |
Q |
| |
|
|||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
13161035 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaac |
13161077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 13170986 - 13171128
Alignment:
| Q |
40 |
ggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgaggg |
139 |
Q |
| |
|
||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |
|
|
| T |
13170986 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13171085 |
T |
|
| Q |
140 |
cgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
182 |
Q |
| |
|
|||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
13171086 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaac |
13171128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 13289620 - 13289762
Alignment:
| Q |
40 |
ggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgaggg |
139 |
Q |
| |
|
||||| || ||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |
|
|
| T |
13289620 |
ggtgtggtcgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13289719 |
T |
|
| Q |
140 |
cgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
182 |
Q |
| |
|
|||| |||||| || |||||||| ||||||||||||||||| |
|
|
| T |
13289720 |
tctgggtttgtgtatcggaggatttcgatattttgagagtaac |
13289762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 13332859 - 13333001
Alignment:
| Q |
40 |
ggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgaggg |
139 |
Q |
| |
|
||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |
|
|
| T |
13332859 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13332958 |
T |
|
| Q |
140 |
cgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
182 |
Q |
| |
|
|||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
13332959 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaac |
13333001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 13344044 - 13344183
Alignment:
| Q |
40 |
ggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgaggg |
139 |
Q |
| |
|
||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |
|
|
| T |
13344044 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13344143 |
T |
|
| Q |
140 |
cgtgggcttgtgtgtctgaggattttgatattttgagagt |
179 |
Q |
| |
|
|||| |||||| || |||||||| |||||| ||||||| |
|
|
| T |
13344144 |
tctgggtttgtgtatcggaggatttcgatattctgagagt |
13344183 |
T |
|
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Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 26906823 - 26907062
Alignment:
| Q |
11 |
cagagacagacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatga |
110 |
Q |
| |
|
|||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
26906823 |
cagagagagacacaacccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttctttacaatgataa |
26906922 |
T |
|
| Q |
111 |
agaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcc |
210 |
Q |
| |
|
||||||||||| ||||||||| ||| ||| |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26906923 |
agaagttcaacggcattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaaccaaatctctccttgaatcggtcacttcc |
26907022 |
T |
|
| Q |
211 |
ataacatgggatagcaataatcttgatgtacttcgagttg |
250 |
Q |
| |
|
| ||| ||||||| ||||||||||||||| |||||||||| |
|
|
| T |
26907023 |
agaacttgggataccaataatcttgatgtccttcgagttg |
26907062 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 17853069 - 17852898
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||| ||| |||||||||||||||| ||||| ||||||||| | || ||||| |||||||| || |||||||||||||||||| | ||| |||| ||||| |
|
|
| T |
17853069 |
ataacaatttaggtgttgttgcaatattggggatgggaggtgtcggtaaaacgacccttgcacagcttgtttacaatgatgaaaaggttgaacatcattt |
17852970 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
200 |
Q |
| |
|
|||| | | || |||| |||||| || || ||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
17852969 |
tgatctcaaagcctgggtttgtgtatcagaagattttgatgttgtgagagtaaccaagtctctccttgaatc |
17852898 |
T |
|
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Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 11484961 - 11485132
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||||| | || ||||| |||||||| |||||||||||||| |||||| ||||| |||| ||||| |
|
|
| T |
11484961 |
ataataatttaggtgttgttgcaattttggttatgggaggcgtcggtaaaacgacccttgcacaacttgtttacaacgatgaaaaagttgaacagcattt |
11485060 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
200 |
Q |
| |
|
|||| | | || |||| |||||| || |||||||| ||| | |||| |||||||||| ||||||||||| |
|
|
| T |
11485061 |
tgatctcaaagcatgggtttgtgtatcggaggatttcgatgtcgtgaggataaccaagtccctccttgaatc |
11485132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 44957834 - 44957735
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||||||| ||||||||||||| | || || ||||||||| | || ||||| || || || |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
44957834 |
ataataatttaggtgttgttgccaccttaggtatgggaggtgtcggtaaaacgactctcgcacaacttgtttacaatgatataaaagttgaacaacattt |
44957735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 136002 - 135860
Alignment:
| Q |
40 |
ggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgaggg |
139 |
Q |
| |
|
||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |
|
|
| T |
136002 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
135903 |
T |
|
| Q |
140 |
cgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
182 |
Q |
| |
|
|||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
135902 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaac |
135860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 146053 - 145911
Alignment:
| Q |
40 |
ggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgaggg |
139 |
Q |
| |
|
||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |
|
|
| T |
146053 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
145954 |
T |
|
| Q |
140 |
cgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
182 |
Q |
| |
|
|||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
145953 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaac |
145911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 250
Target Start/End: Original strand, 29836587 - 29836808
Alignment:
| Q |
29 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
128 |
Q |
| |
|
|||||||||||||||| || |||||| |||||||||||| | || ||||| ||||| || | |||| | ||||| | ||||||||| || | ||||| |
|
|
| T |
29836587 |
ataataatataggtgtagtcgcaattacaggcatgggaggtatcggtaaaacgaccctcgctcgacttatatacaaccaggaagaagttaaaaatcattt |
29836686 |
T |
|
| Q |
129 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaat |
228 |
Q |
| |
|
|||| | | |||| |||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||| | | |||| ||| |||| |
|
|
| T |
29836687 |
tgatgtacaagtctgggtttgtgtgtctgaagattttgatatgttgagagtaaccaaatctctccttgaagttgtcacttcaagagaatggaataccaat |
29836786 |
T |
|
| Q |
229 |
aatcttgatgtacttcgagttg |
250 |
Q |
| |
|
|| |||||| | |||||||||| |
|
|
| T |
29836787 |
aaccttgatcttcttcgagttg |
29836808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 31679845 - 31679703
Alignment:
| Q |
42 |
tgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcg |
141 |
Q |
| |
|
||||||| ||||||| |||||||||||| | || ||||| |||| || |||||| ||||||||||| |||| |||||| ||| ||||||| | | || |
|
|
| T |
31679845 |
tgttgtttcaattttcggcatgggaggtgtcggtaaaacagccctagctcaacttctttacaatgataaagatgttcaagaacgttttgatgtaaaagct |
31679746 |
T |
|
| Q |
142 |
tgggcttgtgtgtctgaggattttgatattttgagagtaacca |
184 |
Q |
| |
|
|||| |||| |||| || || |||||| ||||||| ||||||| |
|
|
| T |
31679745 |
tgggtttgtctgtccgaagagtttgatgttttgagggtaacca |
31679703 |
T |
|
Back To:
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