View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11432_low_8 (Length: 239)
Name: NF11432_low_8
Description: NF11432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11432_low_8 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (3 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10375699 - 10375477
Alignment:
| Q |
1 |
tttgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375699 |
tttgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaa |
10375600 |
T |
|
| Q |
101 |
gttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375599 |
gttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatg |
10375500 |
T |
|
| Q |
201 |
agtttcaccatagttcaaacaca |
223 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
10375499 |
agtttcaccatagttcaaacaca |
10375477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 10032220 - 10032429
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10032220 |
tgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaagt |
10032319 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10032320 |
tgctgaggtggcatgcacatttcctatacatgaactaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcattgggcagtgatgag |
10032419 |
T |
|
| Q |
203 |
tttcaccata |
212 |
Q |
| |
|
|||| |||| |
|
|
| T |
10032420 |
attcagcata |
10032429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9839076 - 9839298
Alignment:
| Q |
1 |
tttgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaa |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9839076 |
tttgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacaaaaa |
9839175 |
T |
|
| Q |
101 |
gttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatg |
200 |
Q |
| |
|
|||||| |||| ||| ||||||||| |||||| || || | |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9839176 |
gttgctgaggtggcacacacatttccaatacataaattagatcttctatcaaatgaagattgttggtctttactctcaaagcatgcattgggaagtgatg |
9839275 |
T |
|
| Q |
201 |
agtttcaccatagttcaaacaca |
223 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
9839276 |
agtttcaccatagttcaaacaca |
9839298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 10260915 - 10261124
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
10260915 |
tgtggaatgacaattataatgattggggtgaactagtaagccccttcgttgatggaaaacctggaagcatggtgattataacaacgcggcaacaaaaagt |
10261014 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10261015 |
tgctgaggtggcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggcagtgatgag |
10261114 |
T |
|
| Q |
203 |
tttcaccata |
212 |
Q |
| |
|
|||| |||| |
|
|
| T |
10261115 |
attcagcata |
10261124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 11769451 - 11769671
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
11769451 |
tgtggaatgacaattataatgattggggtgaactagtaagtcccttcagtaatggaaaacctggaagcatggtgattataacaacacgccaacgaaaagt |
11769550 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
|||| |||| ||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11769551 |
tgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcattgggaagtgatgag |
11769650 |
T |
|
| Q |
203 |
tttcaccatagttcaaacaca |
223 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
11769651 |
tttcaccatagtacaaacaca |
11769671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9849954 - 9850176
Alignment:
| Q |
1 |
tttgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaa |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
9849954 |
tttgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacacgccaacaaaaa |
9850053 |
T |
|
| Q |
101 |
gttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatg |
200 |
Q |
| |
|
|||||| |||| ||| ||||||||| |||||| || || | |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9850054 |
gttgctgaggtggcacacacatttccaatacataaattagatcttctatcaaatgaagattgttggtctttactctcaaagcatgcattgggaagtgatg |
9850153 |
T |
|
| Q |
201 |
agtttcaccatagttcaaacaca |
223 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
9850154 |
agtttcaccatagttcaaacaca |
9850176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 10433896 - 10433690
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10433896 |
tgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacaaaaagt |
10433797 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
|||| |||| ||| |||||||||||||||| || || |||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
10433796 |
tgctgaggtggcacacacatttcctatacataaattagaacttctatcaaatgaagattgttggtctttactctcgaagcatgcattgggcagtgatgag |
10433697 |
T |
|
| Q |
203 |
tttcacc |
209 |
Q |
| |
|
||||||| |
|
|
| T |
10433696 |
tttcacc |
10433690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 10663743 - 10663963
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
10663743 |
tgtggaatgacaattataatgattggagtgaactagcaagtcccttcattgatggaaaacctggaagcatggtgattataacaacgcgcgaacaaaaagt |
10663842 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
|||| |||| ||| |||||||||||||||| || || |||||||||| |||||||| |||||||| ||||| ||||||||||||||||| || || ||| |
|
|
| T |
10663843 |
tgctgaggtggcacacacatttcctatacataaattagaacttctatcaaatgaagattgttggtccttactttcaaagcatgcattgggaagcgacgag |
10663942 |
T |
|
| Q |
203 |
tttcaccatagttcaaacaca |
223 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10663943 |
tttcaccatagttcaaacaca |
10663963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 10527577 - 10527795
Alignment:
| Q |
5 |
tggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagttg |
104 |
Q |
| |
|
|||||||||||||| ||||||||| ||| ||||||||||| |||||||||||||||| ||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
10527577 |
tggaatgacaattacaatgattgggatgagctagtaagtccactcattgatggaaaacctggaagtatggtgattataacaacccaccaacgaaaagttg |
10527676 |
T |
|
| Q |
105 |
ctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgagtt |
204 |
Q |
| |
|
|| |||| ||| ||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10527677 |
ctgaggtggcacgcacatttcctatacataaactaaaacttttatcaaatgaagattgttggtctttactctcaaagcatgcattgggaagtgatgagtt |
10527776 |
T |
|
| Q |
205 |
tcaccatagttcaaacaca |
223 |
Q |
| |
|
|||| ||||| |||||||| |
|
|
| T |
10527777 |
tcacaatagtacaaacaca |
10527795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 10363650 - 10363430
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10363650 |
tgtggaatgacaattataatgattggggtgaactagtaagccccttcattgatggaaaacctggaagcatggtgattataacaacgcgccaagaaaaagt |
10363551 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
||| |||| ||| |||||||||||||||| || || | |||||||| |||||||| |||||| |||||||||||||||||||| |||| | ||||||| |
|
|
| T |
10363550 |
agctgaggtggcacacacatttcctatacataaattagatcttctatcaaatgaagattgttggactttactctcaaagcatgcactgggaaatgatgag |
10363451 |
T |
|
| Q |
203 |
tttcaccatagttcaaacaca |
223 |
Q |
| |
|
|||||| ||||| |||||||| |
|
|
| T |
10363450 |
tttcacaatagtacaaacaca |
10363430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 10127147 - 10127354
Alignment:
| Q |
5 |
tggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagttg |
104 |
Q |
| |
|
||||||||||||| | ||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10127147 |
tggaatgacaattgtaatgattgggatgagctagtaagtcccttcattaatggaaaacctggaagcatggtgattataacaacgcgccaacaaaaagttg |
10127246 |
T |
|
| Q |
105 |
ctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgagtt |
204 |
Q |
| |
|
|| |||| ||| |||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||| | |
|
|
| T |
10127247 |
ctgaggtggcacgcacatttcctatacatgaactaaaagtactatcagatgaagattgttggtctttactatcaaagcatgcattgggaagtgatgagat |
10127346 |
T |
|
| Q |
205 |
tcaccata |
212 |
Q |
| |
|
||| |||| |
|
|
| T |
10127347 |
tcagcata |
10127354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 10184459 - 10184646
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
|||||||||||| |||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10184459 |
tgtggaatgacagttatgatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagcatggtgattataacaacgcgccaagaaaaagt |
10184558 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattg |
190 |
Q |
| |
|
||| |||| ||| ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
10184559 |
agctgaggtggcacacacatttcctatacatgaactaaaacttctatcaaatgaagattgttggtcgttactctcaaagcatgcattg |
10184646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 10089007 - 10089227
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10089007 |
tgtggaatgacaattataatgattggattgcactagtaagtcccttcattgatggaaaacctggaagcatggtgattataacaacgcgccaagaaaaagt |
10089106 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
||| |||| ||| |||||||||||||||| || || ||||||| || |||||||| |||||| ||||||||||||||||||||||||| | |||| || |
|
|
| T |
10089107 |
agctgaggtggcacacacatttcctatacataaattagaacttctgtcaaatgaagattgttggactttactctcaaagcatgcattgggcaatgataag |
10089206 |
T |
|
| Q |
203 |
tttcaccatagttcaaacaca |
223 |
Q |
| |
|
|||| ||||||| |||||||| |
|
|
| T |
10089207 |
tttccccatagtacaaacaca |
10089227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 10195890 - 10196110
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10195890 |
tgtggaatgacaattataatgattggattgcactagtaagtcccttcattgatggaaaacctggaagcatggtgattataacaacgcgccaagaaaaagt |
10195989 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
||| |||| ||| |||||||||||||||| || || ||||||| || |||||||| |||||| ||||||||||||||||||||||||| | |||| || |
|
|
| T |
10195990 |
agctgaggtggcacacacatttcctatacataaattagaacttctgtcaaatgaagattgttggactttactctcaaagcatgcattgggcaatgataag |
10196089 |
T |
|
| Q |
203 |
tttcaccatagttcaaacaca |
223 |
Q |
| |
|
|||| ||||||| |||||||| |
|
|
| T |
10196090 |
tttccccatagtacaaacaca |
10196110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 219
Target Start/End: Original strand, 10580818 - 10581034
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||| | ||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10580818 |
tgtggaatgacaattgtaatgattgggatgagctagtaagtcccttcattaatggaaaacctggaagcatggtgattataacaacgcgccaacaaaaagt |
10580917 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
| | ||| | ||| || ||| || ||||| | || ||| |||||| |||||||| |||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
10580918 |
tacaaagatggcacacatgtttgctgtacataatttagaacctctatcaaatgaagattgttggtctttactctcaaactatgcattgggaagtgatgag |
10581017 |
T |
|
| Q |
203 |
tttcaccatagttcaaa |
219 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
10581018 |
tttcaccatagtacaaa |
10581034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 10077486 - 10077703
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
10077486 |
tgtggaatgacaattatagtgattgggatgaacttgtaagtcccttcattgatggaaagcatggaagcatggtgattataacaacacgccaacaaaaagt |
10077585 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
||| |||| ||| ||||||||||||||||| | || ||| | |||| |||||||| ||||||| |||||| ||||||||||||||| | || |||| |
|
|
| T |
10077586 |
tgcagaggtggcacgcacatttcctatacatatattagaacctttatcaaatgaagattgttggtatttactttcaaagcatgcattgagagttggtgag |
10077685 |
T |
|
| Q |
203 |
tttcaccatagttcaaac |
220 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
10077686 |
tttcaccatagtacaaac |
10077703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 10517700 - 10517895
Alignment:
| Q |
1 |
tttgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaa |
100 |
Q |
| |
|
|||||||||||| |||| |||||||| ||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||| |||| |
|
|
| T |
10517700 |
tttgtggaatgatgattacaatgattggcttgaactagtaagtccactcaatgatggaaaacccgggagttcggtgattataacaacgcgccaacaaaaa |
10517799 |
T |
|
| Q |
101 |
gttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagt |
196 |
Q |
| |
|
||||| |||| ||| |||||||||||| || ||| || ||| |||||| ||||||| |||||||||||||||||||| |||||||| |||||| |
|
|
| T |
10517800 |
gttgcagaggtggcacacacatttcctattcaggaattagaacctctatctcatgaagattgttggtctttactctcaaaacatgcatttggtagt |
10517895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 11781836 - 11781641
Alignment:
| Q |
1 |
tttgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaa |
100 |
Q |
| |
|
|||||||||||| |||| |||||||| ||| ||||||||||| ||| |||||||||||| ||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
11781836 |
tttgtggaatgatgattacaatgattggcttgagctagtaagtccactcaatgatggaaaacctggaagttcggtgattataacaactcgccaacaaaaa |
11781737 |
T |
|
| Q |
101 |
gttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagt |
196 |
Q |
| |
|
||||| |||| ||| |||||||||||| |||| | || ||| |||||| ||||||| ||||||||||||||||| || |||||||| |||||| |
|
|
| T |
11781736 |
gttgcagaggtggcacacacatttcctattcatgcattagaacctctatctcatgaagattgttggtctttactctcgaaacatgcatttggtagt |
11781641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 11130876 - 11130683
Alignment:
| Q |
5 |
tggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagttg |
104 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| |||| ||| || ||| ||||||| ||||||| ||| || | ||||| ||||||| |||||||| |
|
|
| T |
11130876 |
tggaatgacaattataatgattgggatgaacttgtaactcctttgattaatggaaacaatggaagcagggtcatcgtcacaacacgccaacaaaaagttg |
11130777 |
T |
|
| Q |
105 |
ctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
| |||| ||| ||||||||||| ||| || || || || |||| |||||||| |||||||||||||||||||||||||| || ||||| |
|
|
| T |
11130776 |
cagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatgcatttggaagtga |
11130683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 11159867 - 11159674
Alignment:
| Q |
5 |
tggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagttg |
104 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| |||| ||| || ||| ||||||| ||||||| ||| || | ||||| ||||||| |||||||| |
|
|
| T |
11159867 |
tggaatgacaattataatgattgggatgaacttgtaactcctttgattaatggaaacagtggaagcagggtcatcgtcacaacacgccaacaaaaagttg |
11159768 |
T |
|
| Q |
105 |
ctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
| |||| ||| ||||||||||| ||| || || || || |||| |||||||| |||||||||||||||||||||||||| || ||||| |
|
|
| T |
11159767 |
cagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatgcatttggaagtga |
11159674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 10500862 - 10500977
Alignment:
| Q |
74 |
gtgattataacaacgcgccaacgaaaagttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttac |
173 |
Q |
| |
|
||||| |||||||| ||| ||| ||||||||| |||| ||||||||||||||||| ||| || || ||| |||||| |||| || |||||| |||||| |
|
|
| T |
10500862 |
gtgataataacaacacgcgaacaaaaagttgcagaggtcgcatgcacatttcctattcataaattagaacctctatctgatgatgattgttggactttac |
10500961 |
T |
|
| Q |
174 |
tctcaaagcatgcatt |
189 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
10500962 |
tctcgaagcatgcatt |
10500977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 8861505 - 8861698
Alignment:
| Q |
5 |
tggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagttg |
104 |
Q |
| |
|
||||||||||||||| |||| |||| |||||| |||| ||| || ||| ||||||| ||||||| ||| || | ||||| ||||||| |||||||| |
|
|
| T |
8861505 |
tggaatgacaattataatgagtgggatgaacttgtaactcctttgattaatggaaacagtggaagcagggtcatcgtcacaacacgccaacaaaaagttg |
8861604 |
T |
|
| Q |
105 |
ctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
| |||| ||| ||||||||||| ||| || || || || |||| |||||||| |||||||||||||||||||||||||| || ||||| |
|
|
| T |
8861605 |
cagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatgcatttggaagtga |
8861698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 11148704 - 11148511
Alignment:
| Q |
5 |
tggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagttg |
104 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| |||| || || ||| ||||||| ||||||| ||| || | ||||| ||||||| |||||||| |
|
|
| T |
11148704 |
tggaatgacaattataatgattgggatgaacttgtaacacctttgattaatggaaacagtggaagcagggtcatcgtcacaacacgccaacaaaaagttg |
11148605 |
T |
|
| Q |
105 |
ctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
| |||| ||| ||||||||||| ||| || || || || |||| |||||||| |||||||||||||||||||||||||| || ||||| |
|
|
| T |
11148604 |
cagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatgcatttggaagtga |
11148511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 13171248 - 13171443
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
|||||||||| | |||| ||||||||| ||| |||||| ||| || ||| | || ||| | ||||| |||||||| || ||||| ||||||| |||||| |
|
|
| T |
13171248 |
tgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcacaacacgccaacaaaaagt |
13171347 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
||| |||| ||| ||| |||||||| || || || | | |||||| |||| ||||||||||| ||||| |||||||||||||| || ||||| |
|
|
| T |
13171348 |
tgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgcattcggaagtga |
13171443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 13344306 - 13344501
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
|||||||||| | |||| ||||||||| ||| |||||| ||| || ||| | || ||| | ||||| |||||||| || ||||| ||||||| |||||| |
|
|
| T |
13344306 |
tgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcacaacacgccaacaaaaagt |
13344405 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
||| |||| ||| ||| |||||||| || || || | | |||||| |||| ||||||||||| ||||| |||||||||||||| || ||||| |
|
|
| T |
13344406 |
tgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgcattcggaagtga |
13344501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 13161197 - 13161392
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
|||||||||| | |||| ||||||||| ||| |||||| ||| || ||| | || ||| | ||||| | |||||| || ||||| ||||||| |||||| |
|
|
| T |
13161197 |
tgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtagggtgatcatcacaacacgccaacaaaaagt |
13161296 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
||| |||| ||| ||| |||||||| || || || | | |||||| |||| ||||||||||| ||||| |||||||||||||| || ||||| |
|
|
| T |
13161297 |
tgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgcatttggaagtga |
13161392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 13289882 - 13290077
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
|||||||||| | |||| ||||||||| ||| |||||| ||| || ||| | || ||| | ||||| | |||||| || ||||| ||||||| |||||| |
|
|
| T |
13289882 |
tgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacaggaagtagggtgatcatcacaacacgccaacaaaaagt |
13289981 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
||| |||| ||| ||| |||||||| || || || | | |||||| |||| ||||||||||| ||||| |||||||||||||| || ||||| |
|
|
| T |
13289982 |
tgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgcatttggaagtga |
13290077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 13333121 - 13333316
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| |||||| ||| | ||| | || ||| ||||| | |||||| || ||||| ||||||| |||||| |
|
|
| T |
13333121 |
tgtggaatgacaattataatgattgggatgagttagtaactccactgattaacggcaaaaaaggaagtagggtgatcatcacaacacgccaacaaaaagt |
13333220 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
||| |||| ||| ||| |||||||| || || || | | |||||| |||| ||||||||||| ||||| |||||||||||||| || ||||| |
|
|
| T |
13333221 |
tgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgcattcggaagtga |
13333316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 26907114 - 26907325
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
||||||| ||||||||| |||||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26907114 |
tgtggaacgacaattatagtgattgggaagaacttgtaagtcccttcattcatggaaaacctggaagcatggtgattataacaacgcgccaacaaaaagt |
26907213 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgag |
202 |
Q |
| |
|
||| |||| ||| ||||||||||||||| || || ||| |||||| | |||||| |||||||||||||||||||||||||||||||| ||| | ||| |
|
|
| T |
26907214 |
tgcagaggtggcacatacatttcctatacataaattagaacctctatcaactgaagattgttggtctttactctcaaagcatgcattgggaagtaaagag |
26907313 |
T |
|
| Q |
203 |
tttcaccatagt |
214 |
Q |
| |
|
|||||||||||| |
|
|
| T |
26907314 |
tttcaccatagt |
26907325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 17852773 - 17852589
Alignment:
| Q |
5 |
tggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagttg |
104 |
Q |
| |
|
|||||||||||||| ||||||| |||| ||||||| |||||| || | |||||| | ||||||| ||| || |||||||| |||| | |||||||| |
|
|
| T |
17852773 |
tggaatgacaattacgttgattggagtgagctagtaactcccttgtttaagggaaaagctggaagcaaggtcatcataacaacacgcctaaaaaaagttg |
17852674 |
T |
|
| Q |
105 |
ctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcatt |
189 |
Q |
| |
|
| |||| ||| |||||||||| || ||| || || ||| | |||| ||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
17852673 |
cggaggttgcacgcacatttccaattcataaattagaacctatatccgatgaagattgttggtctttgctctcaaagcatgcatt |
17852589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 58123 - 58056
Alignment:
| Q |
152 |
aatgaagactgttggtctttactctcaaagcatgcattgggtagtgatgagtttcaccatagttcaaa |
219 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
58123 |
aatgaagattgttggtctttactctcaaactatgcattgggaagtgatgagtttcaccatagtacaaa |
58056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 11485319 - 11485441
Alignment:
| Q |
67 |
aagcatggtgattataacaacgcgccaacgaaaagttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttgg |
166 |
Q |
| |
|
||||| |||||| |||||||| ||| || |||||||| |||| |||||| |||||||||| ||| || || ||| |||||| ||||||| |||||| |
|
|
| T |
11485319 |
aagcaaggtgatcataacaacacgcgaagagaaagttgcagaggtcgcatgcgcatttcctattcataaattagaacctctatctgatgaagattgttgg |
11485418 |
T |
|
| Q |
167 |
tctttactctcaaagcatgcatt |
189 |
Q |
| |
|
||||||||||| ||||||||||| |
|
|
| T |
11485419 |
tctttactctcgaagcatgcatt |
11485441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 44957425 - 44957354
Alignment:
| Q |
118 |
cacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcatt |
189 |
Q |
| |
|
||||||||| || ||| || || ||| |||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
44957425 |
cacatttccgattcataaattagaacctctatctgatgaagattgttggtctttactctcaaagcatgcatt |
44957354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 135740 - 135545
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
|||||||||| | |||| ||||||||| ||| |||||| ||| || ||| | || ||| | ||||| |||||||| || ||||| ||||||| |||||| |
|
|
| T |
135740 |
tgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcacaacacgccaacaaaaagt |
135641 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
||| |||| ||| ||| |||||||| || || || | | |||||| |||| ||||||||||| ||||| |||||||||||||| || ||||| |
|
|
| T |
135640 |
tgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgcattcggaagtga |
135545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 145791 - 145596
Alignment:
| Q |
3 |
tgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataacaacgcgccaacgaaaagt |
102 |
Q |
| |
|
|||||||||| | |||| ||||||||| ||| |||||| ||| || ||| | || ||| | ||||| |||||||| || ||||| ||||||| |||||| |
|
|
| T |
145791 |
tgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcacaacacgccaacaaaaagt |
145692 |
T |
|
| Q |
103 |
tgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
||| |||| ||| ||| |||||||| || || || | | |||||| |||| ||||||||||| ||||| |||||||||||||| || ||||| |
|
|
| T |
145691 |
tgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatgcattcggaagtga |
145596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 154026 - 153901
Alignment:
| Q |
73 |
ggtgattataacaacgcgccaacgaaaagttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtcttta |
172 |
Q |
| |
|
|||||| || ||||| ||||||| ||||||||| |||| ||| ||| |||||||| || || || | | |||||| |||| ||||||||||| ||| |
|
|
| T |
154026 |
ggtgatcatcacaacacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgtta |
153927 |
T |
|
| Q |
173 |
ctctcaaagcatgcattgggtagtga |
198 |
Q |
| |
|
|| |||||||||||||| || ||||| |
|
|
| T |
153926 |
ctttcaaagcatgcattcggaagtga |
153901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University