View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11433_high_26 (Length: 277)
Name: NF11433_high_26
Description: NF11433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11433_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 20 - 275
Target Start/End: Original strand, 25997532 - 25997787
Alignment:
| Q |
20 |
aaggagacattctgtgacctgtttcagcgattcgaacgaaagggctcgaacttcgacgccagaagcaagagtgttgatgacttgatttgttctggtttga |
119 |
Q |
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| T |
25997532 |
aaggagacattctgtgacctgtttcagggattcgaacgaaagggctcgaacttcgacgccagaagcaagagtgttgatgacttgatttgttctggtttga |
25997631 |
T |
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| Q |
120 |
agtgttgaatcaaatgtctgcaaatctgtgtcaattttgcaggctgcttcataggaacttagctcagttttgtagtgcaattctgttgttgtgaagttaa |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25997632 |
agtgttgaatcaaatgtctgcaaatctgtgtcaattttgcaggctgcttcataggaacttagctcagttttgtagtgcaattctgttgttgtgaagttaa |
25997731 |
T |
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| Q |
220 |
cagcagatgaattttcttgagtctttttgctcatattactcccctttgctactcca |
275 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| |
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| T |
25997732 |
cagcagatgaagtttcttgagtctttttgctcatattactccccattgcaactcca |
25997787 |
T |
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