View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11433_high_34 (Length: 251)

Name: NF11433_high_34
Description: NF11433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11433_high_34
NF11433_high_34
[»] chr6 (31 HSPs)
chr6 (1-238)||(24885938-24886175)
chr6 (123-238)||(24731245-24731357)
chr6 (171-238)||(29116651-29116718)
chr6 (174-238)||(29074153-29074217)
chr6 (174-238)||(29078917-29078981)
chr6 (174-238)||(29106726-29106790)
chr6 (171-238)||(29099733-29099800)
chr6 (1-102)||(24731427-24731529)
chr6 (168-238)||(30999537-30999607)
chr6 (171-238)||(29348140-29348207)
chr6 (171-238)||(29903627-29903694)
chr6 (162-237)||(29929664-29929739)
chr6 (162-238)||(24263285-24263361)
chr6 (171-210)||(29061825-29061864)
chr6 (163-238)||(29867039-29867114)
chr6 (171-238)||(29882825-29882892)
chr6 (171-238)||(29909981-29910048)
chr6 (171-238)||(29912362-29912429)
chr6 (168-238)||(24889785-24889855)
chr6 (189-238)||(29930458-29930507)
chr6 (162-238)||(29085408-29085484)
chr6 (191-238)||(29914382-29914429)
chr6 (168-238)||(29365960-29366030)
chr6 (168-238)||(29887687-29887757)
chr6 (168-238)||(28926086-28926156)
chr6 (162-238)||(29894943-29895016)
chr6 (168-238)||(29898463-29898533)
chr6 (182-232)||(30029744-30029794)
chr6 (182-235)||(15714545-15714598)
chr6 (182-235)||(15726742-15726795)
chr6 (162-235)||(24738728-24738801)
[»] scaffold0054 (1 HSPs)
scaffold0054 (171-238)||(53181-53248)
[»] scaffold0237 (1 HSPs)
scaffold0237 (171-238)||(22733-22800)
[»] chr2 (1 HSPs)
chr2 (186-238)||(15062433-15062485)
[»] scaffold0573 (1 HSPs)
scaffold0573 (168-238)||(4527-4597)
[»] scaffold0652 (1 HSPs)
scaffold0652 (182-235)||(848-901)
[»] scaffold0572 (1 HSPs)
scaffold0572 (182-227)||(3634-3679)
[»] scaffold0429 (1 HSPs)
scaffold0429 (182-227)||(6597-6642)
[»] scaffold0308 (2 HSPs)
scaffold0308 (182-227)||(234-279)
scaffold0308 (186-227)||(9396-9437)


Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 24885938 - 24886175
Alignment:
Q  1 gttgaacctcactgatttctaggtttttgaagtataaacaaacatacaaaagaaacacaaataagaaaatttgttactaattaggagagacaactacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24885938 gttgaacctcactgatttctaggtttttgaagtataaacaaacatacaaaagaaacacaaataagaaaatttgttactaattaggagagacaactacaaa 24886037  T
Q  101 aaataaatgatgccataaattggaaatatcagttcaaaatatcaatgtgtaacaacagaatcatctcacctagtttcagttttacagtagacctctcgcg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24886038 aaataaatgatgccataaattggaaatatcagttcaaaatatcaatgtgtaacaacagaatcatctcacctagtttcagttttacagtagacctctcgcg 24886137  T
Q  201 atcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24886138 atcatttcacggagaagtttctctgccatatcattttc 24886175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 24731357 - 24731245
Alignment:
Q  123 gaaatatcagttcaaaatatcaatgtgtaacaacagaatcatctcacctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttct 222  Q
    ||||||||||||||||||| |||||| |||||    |||||||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||    
T  24731357 gaaatatcagttcaaaataacaatgtctaacat---aatcatctcacctagtttcagtcttacagtagacctcttgcaatcatttcacgaagaagtttct 24731261  T
Q  223 ctgccatatcattttc 238  Q
    ||||||||||||||||    
T  24731260 ctgccatatcattttc 24731245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 29116718 - 29116651
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29116718 tagtttcagttttacagtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttc 29116651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 29074217 - 29074153
Alignment:
Q  174 tttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29074217 tttcagttttacagtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttc 29074153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 29078981 - 29078917
Alignment:
Q  174 tttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29078981 tttcagttttacagtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttc 29078917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 29106790 - 29106726
Alignment:
Q  174 tttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29106790 tttcagttttacagtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttc 29106726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 29099800 - 29099733
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29099800 tagtttcagttttacggtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttc 29099733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24731529 - 24731427
Alignment:
Q  1 gttgaacctcactgatttctaggtttttgaagtataaacaaacat-acaaaagaaacacaaataagaaaatttgttactaattaggagagacaactacaa 99  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||  ||||| | |||||||| ||||||||||||| |||||||||    
T  24731529 gttgaaactcactgatttctcggtttttgaagtttaaacaaacataacaaaagaaacatcaataatataatttgtttctaattaggagaggcaactacaa 24731430  T
Q  100 aaa 102  Q
    |||    
T  24731429 aaa 24731427  T

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Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 30999537 - 30999607
Alignment:
Q  168 acctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  30999537 acctagtttcaattttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttc 30999607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 29348140 - 29348207
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||| ||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  29348140 tagttttagtcttacaatagacctcgcgcgatcatttcacgaagaagtttctctgccatatcattttc 29348207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 29903694 - 29903627
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||||| ||||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||    
T  29903694 tagtttcagtcttacaatagacctcgcatgatcatttcacgaagaagtttctctgccatatcattttc 29903627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 29929739 - 29929664
Alignment:
Q  162 catctcacctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcatttt 237  Q
    ||||| ||||||||||||| ||||| ||| |||||||  ||||||||||| ||||||||||||||| |||||||||    
T  29929739 catcttacctagtttcagtcttacaataggcctctcgtaatcatttcacgaagaagtttctctgccttatcatttt 29929664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 24263285 - 24263361
Alignment:
Q  162 catctcacctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||| ||||||||||||| ||||| ||||||||| |  ||||||||||| ||||||||||| ||| ||||||||||    
T  24263285 catcttacctagtttcagtcttacaatagacctcttgtaatcatttcacgaagaagtttctccgccttatcattttc 24263361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 29061864 - 29061825
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcac 210  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29061864 tagtttcagttttacagtagacctctcgcgatcatttcac 29061825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 29867114 - 29867039
Alignment:
Q  163 atctcacctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||| ||||||||||||| ||||| ||| |||||||  ||||||||||| ||||||||||| ||| ||||||||||    
T  29867114 atcttacctagtttcagtcttacaataggcctctcgtaatcatttcacgaagaagtttctccgccttatcattttc 29867039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 29882892 - 29882825
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||| | ||||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||    
T  29882892 tagtttcaatcttacaatagacctcgcatgatcatttcacgaagaagtttctctgccatatcattttc 29882825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 29910048 - 29909981
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||| | ||||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||    
T  29910048 tagtttcaatcttacaatagacctcgcatgatcatttcacgaagaagtttctctgccatatcattttc 29909981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 29912429 - 29912362
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||| | ||||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||    
T  29912429 tagtttcaatcttacaatagacctcgcatgatcatttcacgaagaagtttctctgccatatcattttc 29912362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 24889785 - 24889855
Alignment:
Q  168 acctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||| | ||||||||||| |||||| | ||||||||||| ||||||||||||||| | ||||||||    
T  24889785 acctagttttaattttacagtagccctctcacaatcatttcacgaagaagtttctctgccgtgtcattttc 24889855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 29930507 - 29930458
Alignment:
Q  189 agacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  29930507 agacctctcacgatcatttcacgaagaaatttctctgccatatcattttc 29930458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 29085484 - 29085408
Alignment:
Q  162 catctcacctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||| ||||| ||||||| ||||| |||||||||||  ||||||||||| | ||||||||| ||| ||||||||||    
T  29085484 catcttacctaatttcagtcttacaatagacctctcgtaatcatttcacgaaaaagtttctccgccttatcattttc 29085408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 29914429 - 29914382
Alignment:
Q  191 acctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||    
T  29914429 acctctcaagatcatttcacgaagaagtttctctgccatatcattttc 29914382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 29365960 - 29366030
Alignment:
Q  168 acctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||||||| ||| | ||| |||||||  ||||||||||| ||||||||||| ||| ||||||||||    
T  29365960 acctagtttcagtcttaaaataggcctctcgtaatcatttcacgaagaagtttctccgccttatcattttc 29366030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 29887757 - 29887687
Alignment:
Q  168 acctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||||||| ||||| ||| |||||||  ||||||||||| ||||| ||||| ||| ||||||||||    
T  29887757 acctagtttcagtcttacaataggcctctcgtaatcatttcacgaagaagattctccgccttatcattttc 29887687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 28926086 - 28926156
Alignment:
Q  168 acctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||||| | ||||| ||| |||||||  ||||||||| | ||||||||||| ||| ||||||||||    
T  28926086 acctagtttcaatcttacaatagccctctcgtaatcatttcaagaagaagtttctccgccttatcattttc 28926156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 29895016 - 29894943
Alignment:
Q  162 catctcacctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||| ||||||||||||| ||||| ||| |||||||  ||||||||||   |||||||||| ||| ||||||||||    
T  29895016 catcttacctagtttcagtcttacaataggcctctcgtaatcatttcac---gaagtttctccgccttatcattttc 29894943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 29898533 - 29898463
Alignment:
Q  168 acctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||||||| ||| | ||| ||||||   ||||||||||| ||||||||||| ||| ||||||||||    
T  29898533 acctagtttcagtcttataataggcctctcataatcatttcacgaagaagtttctccgccttatcattttc 29898463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 30029794 - 30029744
Alignment:
Q  182 ttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatc 232  Q
    ||||| ||||||||| || ||||||||||  ||||||||||||||||||||    
T  30029794 ttacaatagacctctagcaatcatttcacaaagaagtttctctgccatatc 30029744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 15714545 - 15714598
Alignment:
Q  182 ttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcatt 235  Q
    |||||| |||||||  || ||||||||||| ||||||||||||||| |||||||    
T  15714545 ttacagaagacctcgagcaatcatttcacgcagaagtttctctgccttatcatt 15714598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 15726742 - 15726795
Alignment:
Q  182 ttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcatt 235  Q
    ||||| ||||||||| || ||||||||||| ||||||| ||||||| |||||||    
T  15726742 ttacaatagacctctagcaatcatttcacgtagaagttgctctgccttatcatt 15726795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 24738728 - 24738801
Alignment:
Q  162 catctcacctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcatt 235  Q
    |||||||||| |||| | | ||| ||||||||||| || ||||||||||| ||||||| | ||||| |||||||    
T  24738728 catctcaccttgttttattcttatagtagacctctagcaatcatttcacgaagaagttccactgccttatcatt 24738801  T

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Target: scaffold0054 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 53181 - 53248
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||||| ||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  53181 tagtttcagtcttacaatagacctcacgcgatcatttcacaaagaagtttctctgccatatcattttc 53248  T

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Target: scaffold0237 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 22800 - 22733
Alignment:
Q  171 tagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||| | ||||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||    
T  22800 tagtttcaatcttacaatagacctcgcatgatcatttcacgaagaagtttctctgccatatcattttc 22733  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 15062433 - 15062485
Alignment:
Q  186 agtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    |||||||||||||| ||||||||||| ||||||||||||||  ||||||||||    
T  15062433 agtagacctctcgctatcatttcacgaagaagtttctctgctttatcattttc 15062485  T

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Target: scaffold0573 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 4597 - 4527
Alignment:
Q  168 acctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttc 238  Q
    ||||||||||| | ||||| ||| |||||||  ||||||||| | ||||||||||| ||| ||||||||||    
T  4597 acctagtttcaatcttacaatagccctctcgtaatcatttcaagaagaagtttctccgccttatcattttc 4527  T

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Target: scaffold0652 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 848 - 901
Alignment:
Q  182 ttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcatt 235  Q
    |||||||||||| |  || ||||||||||| ||||||||||||||| |||||||    
T  848 ttacagtagaccgcgagcaatcatttcacgtagaagtttctctgccttatcatt 901  T

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Target: scaffold0572 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 3679 - 3634
Alignment:
Q  182 ttacagtagacctctcgcgatcatttcacggagaagtttctctgcc 227  Q
    ||||||||||||||| || ||||||||||| || ||||||||||||    
T  3679 ttacagtagacctctggcaatcatttcacgtagtagtttctctgcc 3634  T

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Target: scaffold0429 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 6642 - 6597
Alignment:
Q  182 ttacagtagacctctcgcgatcatttcacggagaagtttctctgcc 227  Q
    ||||||||||||||| || ||||||||||| || ||||||||||||    
T  6642 ttacagtagacctctagcaatcatttcacgtagtagtttctctgcc 6597  T

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Target: scaffold0308 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 279 - 234
Alignment:
Q  182 ttacagtagacctctcgcgatcatttcacggagaagtttctctgcc 227  Q
    ||||||||||||||| || ||||||||||| || ||||||||||||    
T  279 ttacagtagacctctggcaatcatttcacgtagtagtttctctgcc 234  T

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Target: scaffold0308; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 9437 - 9396
Alignment:
Q  186 agtagacctctcgcgatcatttcacggagaagtttctctgcc 227  Q
    ||||||||||| || ||||||||||| |||||||||||||||    
T  9437 agtagacctctagcaatcatttcacgtagaagtttctctgcc 9396  T

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