View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11436_high_28 (Length: 389)

Name: NF11436_high_28
Description: NF11436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11436_high_28
NF11436_high_28
[»] chr7 (44 HSPs)
chr7 (12-297)||(47559556-47559847)
chr7 (113-244)||(27378836-27378965)
chr7 (182-242)||(44821959-44822019)
chr7 (68-147)||(22388008-22388087)
chr7 (186-308)||(529379-529501)
chr7 (148-241)||(20526414-20526505)
chr7 (188-244)||(7244686-7244742)
chr7 (91-200)||(9527142-9527250)
chr7 (107-200)||(47004013-47004105)
chr7 (97-147)||(3610844-3610894)
chr7 (182-224)||(40252135-40252177)
chr7 (107-155)||(6552365-6552414)
chr7 (181-245)||(19022592-19022656)
chr7 (113-247)||(28165023-28165156)
chr7 (178-249)||(2825234-2825305)
chr7 (148-245)||(5947153-5947247)
chr7 (181-260)||(9038111-9038189)
chr7 (181-224)||(12110359-12110402)
chr7 (60-139)||(27508074-27508153)
chr7 (168-247)||(33678766-33678845)
chr7 (132-245)||(40688993-40689105)
chr7 (182-245)||(43648240-43648303)
chr7 (181-224)||(46280300-46280343)
chr7 (111-145)||(1350348-1350382)
chr7 (107-153)||(45078219-45078265)
chr7 (191-260)||(22551397-22551466)
chr7 (109-200)||(25827320-25827410)
chr7 (181-234)||(37064482-37064535)
chr7 (167-248)||(38010699-38010780)
chr7 (167-248)||(39907788-39907869)
chr7 (97-145)||(40438986-40439037)
chr7 (181-222)||(46104332-46104373)
chr7 (107-159)||(46213729-46213782)
chr7 (167-224)||(47177621-47177678)
chr7 (181-234)||(49019867-49019920)
chr7 (107-198)||(49060466-49060556)
chr7 (107-147)||(991178-991218)
chr7 (107-158)||(991996-992048)
chr7 (97-164)||(3279638-3279706)
chr7 (184-224)||(15309593-15309633)
chr7 (181-241)||(25596032-25596092)
chr7 (182-234)||(34744028-34744080)
chr7 (181-245)||(39279762-39279826)
chr7 (196-260)||(43250691-43250755)
[»] chr4 (55 HSPs)
chr4 (278-389)||(46187759-46187870)
chr4 (68-249)||(17883954-17884135)
chr4 (167-248)||(7694014-7694095)
chr4 (167-240)||(18628555-18628628)
chr4 (59-124)||(19304806-19304871)
chr4 (181-234)||(20031748-20031801)
chr4 (107-163)||(30024626-30024683)
chr4 (167-248)||(42685409-42685490)
chr4 (167-236)||(50004160-50004229)
chr4 (88-210)||(24443945-24444066)
chr4 (182-250)||(53673660-53673728)
chr4 (126-243)||(33534178-33534294)
chr4 (182-245)||(52315204-52315267)
chr4 (190-236)||(825506-825552)
chr4 (107-260)||(23819016-23819167)
chr4 (107-243)||(49219065-49219200)
chr4 (121-236)||(3155543-3155657)
chr4 (183-260)||(29263371-29263448)
chr4 (102-241)||(30207582-30207719)
chr4 (181-245)||(17822872-17822936)
chr4 (68-167)||(24193472-24193572)
chr4 (97-224)||(44319866-44319991)
chr4 (182-250)||(47800623-47800691)
chr4 (108-167)||(47970245-47970305)
chr4 (98-252)||(54325037-54325190)
chr4 (189-245)||(55414427-55414483)
chr4 (269-308)||(1075558-1075597)
chr4 (189-248)||(8468955-8469014)
chr4 (181-224)||(16200009-16200052)
chr4 (110-172)||(28623218-28623281)
chr4 (181-248)||(43932434-43932501)
chr4 (88-139)||(46860276-46860327)
chr4 (68-159)||(54986309-54986400)
chr4 (111-176)||(4663770-4663836)
chr4 (107-164)||(19422344-19422402)
chr4 (68-248)||(24929380-24929559)
chr4 (178-260)||(30066758-30066840)
chr4 (181-243)||(34398694-34398756)
chr4 (182-248)||(43824283-43824349)
chr4 (181-247)||(49202644-49202710)
chr4 (68-137)||(50298417-50298487)
chr4 (180-234)||(55302247-55302301)
chr4 (107-148)||(2980574-2980615)
chr4 (191-248)||(8469381-8469438)
chr4 (182-223)||(25548558-25548599)
chr4 (111-159)||(27671923-27671972)
chr4 (182-243)||(27721717-27721778)
chr4 (183-248)||(52746844-52746909)
chr4 (184-224)||(942136-942176)
chr4 (107-147)||(4191665-4191705)
chr4 (182-234)||(20109009-20109061)
chr4 (98-200)||(24160547-24160648)
chr4 (107-147)||(27616412-27616452)
chr4 (72-167)||(36734784-36734880)
chr4 (108-163)||(41088311-41088367)
[»] chr8 (49 HSPs)
chr8 (107-252)||(28769339-28769483)
chr8 (170-248)||(30389087-30389165)
chr8 (67-164)||(34563136-34563234)
chr8 (182-247)||(9956819-9956884)
chr8 (148-247)||(33714241-33714337)
chr8 (107-163)||(40280292-40280349)
chr8 (181-245)||(27028830-27028894)
chr8 (88-210)||(35869744-35869865)
chr8 (107-248)||(40728421-40728562)
chr8 (126-199)||(26820144-26820216)
chr8 (111-200)||(42597331-42597419)
chr8 (182-260)||(11569449-11569527)
chr8 (111-223)||(14905125-14905236)
chr8 (182-247)||(1930035-1930100)
chr8 (189-234)||(35534631-35534676)
chr8 (191-248)||(42215086-42215143)
chr8 (167-260)||(42764252-42764345)
chr8 (184-224)||(38874648-38874688)
chr8 (181-236)||(10114488-10114543)
chr8 (167-258)||(12361177-12361268)
chr8 (179-242)||(27754401-27754464)
chr8 (61-159)||(29699134-29699233)
chr8 (189-260)||(30259121-30259192)
chr8 (126-243)||(31862438-31862554)
chr8 (107-248)||(41620295-41620435)
chr8 (107-219)||(2107362-2107470)
chr8 (126-167)||(2699251-2699293)
chr8 (182-248)||(5069697-5069763)
chr8 (282-320)||(9130238-9130276)
chr8 (278-320)||(9700110-9700152)
chr8 (178-236)||(14247240-14247298)
chr8 (191-245)||(30918122-30918176)
chr8 (112-161)||(32506988-32507038)
chr8 (110-148)||(42476034-42476072)
chr8 (181-247)||(43504750-43504816)
chr8 (182-244)||(43717945-43718007)
chr8 (182-247)||(1113058-1113123)
chr8 (148-251)||(2482833-2482932)
chr8 (109-157)||(11188248-11188297)
chr8 (107-159)||(14482128-14482181)
chr8 (188-257)||(20672756-20672825)
chr8 (107-148)||(26813908-26813949)
chr8 (182-223)||(29168921-29168962)
chr8 (188-241)||(44236834-44236887)
chr8 (189-248)||(4281552-4281612)
chr8 (167-247)||(7514563-7514643)
chr8 (112-167)||(26215427-26215483)
chr8 (110-248)||(39866738-39866878)
chr8 (69-145)||(43208239-43208315)
[»] chr5 (59 HSPs)
chr5 (111-245)||(33234292-33234424)
chr5 (107-243)||(31694444-31694579)
chr5 (112-247)||(9202753-9202887)
chr5 (106-242)||(18704046-18704180)
chr5 (183-247)||(4014429-4014493)
chr5 (166-260)||(13604841-13604935)
chr5 (182-260)||(41957443-41957521)
chr5 (182-243)||(7319017-7319078)
chr5 (181-242)||(12425570-12425631)
chr5 (168-248)||(37588364-37588444)
chr5 (68-123)||(912995-913050)
chr5 (181-252)||(15402829-15402900)
chr5 (71-138)||(27104527-27104594)
chr5 (97-199)||(32059642-32059742)
chr5 (166-245)||(41981872-41981951)
chr5 (182-248)||(11707055-11707121)
chr5 (166-260)||(21768189-21768283)
chr5 (68-157)||(26516185-26516275)
chr5 (178-248)||(28413288-28413358)
chr5 (181-223)||(32942617-32942659)
chr5 (181-247)||(39105463-39105529)
chr5 (113-237)||(1550830-1550952)
chr5 (183-260)||(3977309-3977386)
chr5 (182-247)||(14182386-14182450)
chr5 (150-258)||(17258877-17258983)
chr5 (182-247)||(34160731-34160796)
chr5 (184-241)||(39594809-39594866)
chr5 (206-247)||(40848769-40848810)
chr5 (182-250)||(1636771-1636838)
chr5 (105-164)||(7096213-7096273)
chr5 (88-159)||(29115304-29115376)
chr5 (112-246)||(36796712-36796845)
chr5 (168-248)||(37526203-37526283)
chr5 (107-236)||(912663-912793)
chr5 (181-260)||(6587099-6587178)
chr5 (167-242)||(7319391-7319466)
chr5 (108-248)||(16863708-16863846)
chr5 (117-242)||(16889671-16889795)
chr5 (181-224)||(28776992-28777035)
chr5 (109-167)||(35135745-35135804)
chr5 (178-248)||(12460005-12460075)
chr5 (132-260)||(14295457-14295584)
chr5 (151-257)||(18543192-18543296)
chr5 (182-248)||(42582912-42582978)
chr5 (207-260)||(8177524-8177577)
chr5 (196-257)||(12521542-12521603)
chr5 (107-202)||(19177405-19177499)
chr5 (107-159)||(20982226-20982279)
chr5 (88-156)||(29588787-29588856)
chr5 (166-243)||(36639506-36639583)
chr5 (168-248)||(37690640-37690721)
chr5 (196-260)||(1899168-1899232)
chr5 (181-241)||(10272442-10272502)
chr5 (97-156)||(10391269-10391329)
chr5 (181-245)||(33533546-33533610)
chr5 (282-322)||(36318887-36318927)
chr5 (108-167)||(37063157-37063217)
chr5 (107-147)||(37489411-37489451)
chr5 (112-159)||(40048371-40048419)
[»] chr1 (69 HSPs)
chr1 (126-258)||(10199402-10199533)
chr1 (181-258)||(34290235-34290312)
chr1 (182-243)||(35179139-35179200)
chr1 (181-245)||(7137005-7137069)
chr1 (112-221)||(33527178-33527286)
chr1 (102-252)||(41638308-41638459)
chr1 (107-252)||(52286604-52286748)
chr1 (181-252)||(14629966-14630037)
chr1 (97-148)||(49125750-49125801)
chr1 (182-260)||(6292493-6292571)
chr1 (132-248)||(31517744-31517859)
chr1 (180-260)||(6102152-6102233)
chr1 (68-145)||(14128577-14128654)
chr1 (181-245)||(2777891-2777955)
chr1 (89-199)||(30259540-30259649)
chr1 (188-252)||(38867831-38867895)
chr1 (107-167)||(45107549-45107609)
chr1 (185-245)||(45975693-45975753)
chr1 (68-159)||(49557028-49557120)
chr1 (169-248)||(4576792-4576871)
chr1 (182-257)||(5886989-5887064)
chr1 (108-217)||(17269177-17269285)
chr1 (148-241)||(4548689-4548780)
chr1 (181-243)||(26779934-26779996)
chr1 (182-260)||(27140478-27140556)
chr1 (107-145)||(47885114-47885152)
chr1 (167-260)||(1565527-1565620)
chr1 (167-248)||(3063361-3063442)
chr1 (167-236)||(7472296-7472365)
chr1 (189-242)||(12564509-12564562)
chr1 (93-142)||(16980738-16980787)
chr1 (188-253)||(28077068-28077133)
chr1 (206-247)||(38503470-38503511)
chr1 (181-245)||(3234022-3234086)
chr1 (181-241)||(32113657-32113717)
chr1 (192-248)||(37593688-37593744)
chr1 (181-245)||(42174854-42174918)
chr1 (114-176)||(4699686-4699749)
chr1 (181-248)||(10744300-10744367)
chr1 (107-248)||(16981940-16982080)
chr1 (181-248)||(25479580-25479647)
chr1 (168-260)||(28689444-28689538)
chr1 (127-252)||(29007716-29007840)
chr1 (181-248)||(37842359-37842426)
chr1 (184-247)||(38116083-38116146)
chr1 (66-164)||(49173290-49173389)
chr1 (182-260)||(11639408-11639486)
chr1 (182-260)||(14443449-14443527)
chr1 (207-249)||(15361065-15361107)
chr1 (278-308)||(15515665-15515695)
chr1 (182-244)||(15558217-15558279)
chr1 (195-261)||(46252673-46252739)
chr1 (189-247)||(51695500-51695558)
chr1 (182-244)||(51929783-51929845)
chr1 (278-320)||(52013996-52014038)
chr1 (182-247)||(15784329-15784394)
chr1 (182-243)||(16322849-16322910)
chr1 (167-248)||(30371133-30371214)
chr1 (189-234)||(49888774-49888819)
chr1 (181-245)||(473163-473227)
chr1 (182-218)||(1865115-1865151)
chr1 (107-147)||(4202233-4202273)
chr1 (175-247)||(17577773-17577845)
chr1 (68-147)||(24146363-24146442)
chr1 (181-245)||(24915058-24915122)
chr1 (184-260)||(27963362-27963438)
chr1 (68-167)||(44936673-44936773)
chr1 (126-200)||(49517015-49517088)
chr1 (120-258)||(49692046-49692181)
[»] chr2 (64 HSPs)
chr2 (188-260)||(8017440-8017512)
chr2 (181-241)||(42621386-42621446)
chr2 (181-260)||(29316767-29316846)
chr2 (107-217)||(3102619-3102728)
chr2 (197-260)||(28677651-28677714)
chr2 (182-248)||(1625900-1625966)
chr2 (112-200)||(10143103-10143190)
chr2 (183-241)||(16398115-16398173)
chr2 (189-247)||(35379021-35379079)
chr2 (118-204)||(39621890-39621973)
chr2 (89-234)||(11513809-11513950)
chr2 (183-260)||(40158719-40158796)
chr2 (148-260)||(44438831-44438941)
chr2 (167-247)||(9395115-9395195)
chr2 (183-247)||(40279268-40279332)
chr2 (183-247)||(40279338-40279402)
chr2 (113-222)||(2416245-2416353)
chr2 (189-248)||(38078414-38078473)
chr2 (112-248)||(4026748-4026883)
chr2 (117-233)||(5133708-5133823)
chr2 (168-242)||(6227737-6227811)
chr2 (183-261)||(7871644-7871722)
chr2 (176-249)||(6718537-6718609)
chr2 (206-247)||(7928304-7928345)
chr2 (181-242)||(13869105-13869166)
chr2 (167-224)||(18066113-18066170)
chr2 (178-247)||(26143645-26143714)
chr2 (167-248)||(33931574-33931655)
chr2 (182-247)||(40279197-40279262)
chr2 (182-247)||(40682400-40682464)
chr2 (67-151)||(2400042-2400126)
chr2 (108-159)||(3673734-3673786)
chr2 (102-200)||(17952753-17952850)
chr2 (68-159)||(33197330-33197422)
chr2 (181-248)||(1893285-1893352)
chr2 (181-224)||(6167311-6167354)
chr2 (180-247)||(9174813-9174880)
chr2 (189-244)||(15977992-15978047)
chr2 (107-165)||(28803591-28803650)
chr2 (167-234)||(33319830-33319897)
chr2 (181-248)||(36415677-36415744)
chr2 (167-245)||(1493520-1493598)
chr2 (182-260)||(10567057-10567135)
chr2 (178-224)||(21616655-21616701)
chr2 (185-247)||(26626876-26626938)
chr2 (143-252)||(35485880-35485987)
chr2 (107-157)||(35809859-35809909)
chr2 (182-224)||(42409331-42409373)
chr2 (181-234)||(12464491-12464544)
chr2 (182-247)||(16451118-16451183)
chr2 (167-248)||(22681189-22681270)
chr2 (148-260)||(33256708-33256818)
chr2 (183-224)||(40279408-40279449)
chr2 (191-248)||(44443330-44443387)
chr2 (278-322)||(2964726-2964770)
chr2 (64-163)||(5867278-5867378)
chr2 (110-196)||(11344340-11344425)
chr2 (181-245)||(16867738-16867802)
chr2 (182-234)||(23974510-23974562)
chr2 (181-245)||(26202027-26202091)
chr2 (167-247)||(28039337-28039417)
chr2 (102-165)||(37053515-37053579)
chr2 (186-242)||(42457952-42458008)
chr2 (113-199)||(43199346-43199431)
[»] chr3 (58 HSPs)
chr3 (112-248)||(36783338-36783474)
chr3 (182-260)||(39602202-39602280)
chr3 (113-260)||(20192598-20192744)
chr3 (107-243)||(34924547-34924681)
chr3 (181-258)||(52440656-52440733)
chr3 (181-243)||(2719467-2719529)
chr3 (87-165)||(3015934-3016012)
chr3 (182-248)||(20669172-20669238)
chr3 (167-252)||(33405166-33405252)
chr3 (182-256)||(36887504-36887578)
chr3 (182-248)||(40665429-40665495)
chr3 (182-247)||(21367667-21367732)
chr3 (179-248)||(33883754-33883823)
chr3 (107-249)||(54775054-54775194)
chr3 (97-243)||(38462197-38462342)
chr3 (187-234)||(3845580-3845627)
chr3 (183-242)||(41633361-41633420)
chr3 (181-236)||(50600194-50600249)
chr3 (182-260)||(1217792-1217870)
chr3 (108-224)||(24158531-24158645)
chr3 (169-247)||(34610811-34610889)
chr3 (89-158)||(39971227-39971297)
chr3 (178-247)||(26320107-26320176)
chr3 (112-248)||(30573918-30574051)
chr3 (183-248)||(37273135-37273200)
chr3 (168-236)||(14548737-14548805)
chr3 (97-156)||(20173982-20174042)
chr3 (117-243)||(23785191-23785316)
chr3 (181-245)||(28622006-28622070)
chr3 (181-233)||(44747427-44747479)
chr3 (181-224)||(4526396-4526439)
chr3 (107-157)||(16790181-16790232)
chr3 (181-224)||(22203429-22203472)
chr3 (185-224)||(32582747-32582786)
chr3 (181-224)||(46886720-46886763)
chr3 (282-320)||(24684741-24684779)
chr3 (99-199)||(32064358-32064456)
chr3 (206-248)||(47249490-47249532)
chr3 (181-222)||(18405861-18405902)
chr3 (185-218)||(23816053-23816086)
chr3 (107-167)||(27792798-27792859)
chr3 (267-308)||(27795944-27795985)
chr3 (267-320)||(30321937-30321990)
chr3 (181-234)||(30443892-30443945)
chr3 (148-233)||(34254827-34254911)
chr3 (107-159)||(41028942-41028995)
chr3 (191-260)||(45541580-45541649)
chr3 (184-248)||(2128262-2128326)
chr3 (183-243)||(12985354-12985414)
chr3 (282-326)||(20880589-20880633)
chr3 (107-147)||(25185919-25185959)
chr3 (181-245)||(25776116-25776180)
chr3 (107-147)||(28283681-28283721)
chr3 (181-245)||(39980728-39980792)
chr3 (279-307)||(41028804-41028832)
chr3 (178-250)||(47319273-47319345)
chr3 (90-165)||(51278242-51278318)
chr3 (188-260)||(54180772-54180844)
[»] scaffold0024 (2 HSPs)
scaffold0024 (68-199)||(27463-27593)
scaffold0024 (182-224)||(21313-21355)
[»] chr6 (40 HSPs)
chr6 (126-245)||(2735014-2735132)
chr6 (112-251)||(4006645-4006783)
chr6 (107-258)||(6647315-6647463)
chr6 (181-220)||(24982704-24982743)
chr6 (181-260)||(31624089-31624168)
chr6 (108-167)||(32513752-32513811)
chr6 (107-249)||(5328900-5329040)
chr6 (111-258)||(27893977-27894122)
chr6 (181-236)||(835265-835320)
chr6 (107-236)||(29274245-29274373)
chr6 (112-236)||(9093572-9093695)
chr6 (181-247)||(9109256-9109322)
chr6 (107-248)||(8010283-8010423)
chr6 (167-224)||(20861727-20861784)
chr6 (70-147)||(31461567-31461644)
chr6 (107-248)||(32386110-32386243)
chr6 (181-237)||(836556-836612)
chr6 (165-248)||(4246393-4246476)
chr6 (110-219)||(6654544-6654652)
chr6 (181-224)||(8201232-8201275)
chr6 (107-224)||(8420225-8420341)
chr6 (152-210)||(9604821-9604877)
chr6 (108-213)||(10016472-10016576)
chr6 (68-123)||(14340931-14340986)
chr6 (167-245)||(14492287-14492365)
chr6 (108-165)||(32975905-32975963)
chr6 (182-224)||(33787773-33787815)
chr6 (182-244)||(34430469-34430531)
chr6 (181-247)||(34910414-34910480)
chr6 (182-247)||(2455259-2455324)
chr6 (102-159)||(26564892-26564949)
chr6 (114-166)||(2034523-2034575)
chr6 (107-166)||(2514628-2514688)
chr6 (282-322)||(4163266-4163306)
chr6 (282-322)||(4224887-4224927)
chr6 (169-241)||(10616552-10616624)
chr6 (64-136)||(13907739-13907811)
chr6 (282-322)||(20861615-20861655)
chr6 (88-136)||(27727189-27727237)
chr6 (107-147)||(31668789-31668829)
[»] scaffold0590 (1 HSPs)
scaffold0590 (107-167)||(1157-1218)
[»] scaffold0275 (1 HSPs)
scaffold0275 (107-167)||(2757-2818)
[»] scaffold0100 (1 HSPs)
scaffold0100 (65-162)||(42501-42599)
[»] scaffold0654 (1 HSPs)
scaffold0654 (93-148)||(6740-6795)
[»] scaffold0014 (1 HSPs)
scaffold0014 (93-148)||(116659-116714)
[»] scaffold0221 (1 HSPs)
scaffold0221 (180-234)||(22229-22283)
[»] scaffold0508 (1 HSPs)
scaffold0508 (107-148)||(9878-9919)
[»] scaffold0167 (1 HSPs)
scaffold0167 (169-218)||(17263-17312)
[»] scaffold0349 (1 HSPs)
scaffold0349 (88-136)||(5768-5816)


Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 12 - 297
Target Start/End: Complemental strand, 47559847 - 47559556
Alignment:
Q  12 aagaagcagtctagttttgcttattaatgaaatcgttttgcctttcgacctatttagataaacaacttaattttatgcttataatataaacactaatcat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47559847 aagaagcagtctagttttgcttattaatgaaatcgttttgcctttcgccctatttagataaacaacttaattatatgcttataatataaacactaatcat 47559748  T
Q  112 ataagtgcttatgaataagttatttctacaacaaaaataaaa-----taaagtaaaactatg-tttttatacaaactataagctgttttcataagttatt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47559747 ataagtgcttatgaataagttatttctacaacaaaaataaaataaaataaagtaaaactatgttttttatacaaactataagctgttttcataagttatt 47559648  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgtacgaatcagtttcagatgtgtttatgccagtagataa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  47559647 ttggagaacttatgaaaatgagccgaaaacaacttatgaacatgtcaaaagctctacgaatcagtttcagatgtgtttatgcccgtagataa 47559556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 244
Target Start/End: Complemental strand, 27378965 - 27378836
Alignment:
Q  113 taagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggaga 212  Q
    |||||||||||| ||||| ||||||||  |||||| |||||||||||| ||||  ||||| ||| |||||| || ||||||||||||  |||  ||||||    
T  27378965 taagtgcttatgtataagctatttctattacaaaagtaaaataaagtagaact--gttttcatataaactacaatctgttttcataaactatcctggaga 27378868  T
Q  213 acttatgaaaatgagccgaaaacaacttatga 244  Q
     ||||||||||| | | |||||||||||||||    
T  27378867 gcttatgaaaataaactgaaaacaacttatga 27378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 44821959 - 44822019
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||    
T  44821959 tataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttat 44822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 22388087 - 22388008
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    ||||||||||||||||    |||||||| ||||||||| ||||| |||||||||||| ||||| |||||||| |||||||    
T  22388087 gataaacaacttaattaagcgcttataacataaacacttatcatttaagtgcttatggataagctatttctataacaaaa 22388008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 529379 - 529501
Alignment:
Q  186 agctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgtacgaatcagtttcagatgtgtttat 285  Q
    ||||||||||||||| ||| ||||||| |||||||||||  |  ||||||| ||||||||| | ||| ||| | | | ||  ||  ||| | ||||||||    
T  529379 agctgttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataagttctcccaaatagcctcacaagtgtttat 529478  T
Q  286 gccagtagataagctcaaataag 308  Q
    |||||||||||||||||||||||    
T  529479 gccagtagataagctcaaataag 529501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 20526414 - 20526505
Alignment:
Q  148 ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    |||||||||||| ||| ||||||| ||  ||  |||||||||||||||||||| |||||||||||||| |||||||| |||  |||||| ||||    
T  20526414 ataaaataaagttaaattatgtttgta--catgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagctta 20526505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 7244686 - 7244742
Alignment:
Q  188 ctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatga 244  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||| |||||||||||||||    
T  7244686 ctgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatga 7244742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 9527250 - 9527142
Alignment:
Q  91 tataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagct 189  Q
    |||| |||||||||| |||||| ||||||||||  ||| | ||| |||| ||||||| ||| |||||||| |||||  ||||| ||| |||||||||| |    
T  9527250 tatagtataaacacttatcatacaagtgcttatatatacgctatatctataacaaaagatataataaagtcaaact--gttttcatataaactataagtt 9527153  T
Q  190 gttttcataag 200  Q
    |||||||||||    
T  9527152 gttttcataag 9527142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 200
Target Start/End: Original strand, 47004013 - 47004105
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataag 200  Q
    |||||||||||| ||||   |||| |||||||| ||||| | |||||||||||| |||||||  |||||||  ||||||||||||||||||||||    
T  47004013 atcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactat--ttttatatgaactataagctgttttcataag 47004105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 3610894 - 3610844
Alignment:
Q  97 ataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    |||||||||  ||||||||||||||||| ||||| ||||||||||||||||    
T  3610894 ataaacacttgtcatataagtgcttatgtataagctatttctacaacaaaa 3610844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 40252177 - 40252135
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  40252177 tataagctcttttcataagttatcttggagaacttatgaaaat 40252135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 6552414 - 6552365
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaata 155  Q
    |||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  6552414 atcatataagtgcttatgtacaagttatttctacaacaaaagataaaata 6552365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 19022656 - 19022592
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||| ||||| ||| ||||||||||||||||||| ||  ||| ||||||||||||    
T  19022656 ctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaa 19022592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 247
Target Start/End: Original strand, 28165023 - 28165156
Alignment:
Q  113 taagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggag 211  Q
    |||||||||||| ||||||| |||||| ||||||| ||||||| |||| |||   |||||| ||| || |||||| |||| || ||||| |||  |||||    
T  28165023 taagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaa--ttgttttaatataagctataaactgtctttataagctatcatggag 28165120  T
Q  212 aacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    | |||||| |||| ||  ||||||| ||||||||||    
T  28165121 agcttatggaaataagttgaaaacagcttatgaaca 28165156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 2825305 - 2825234
Alignment:
Q  178 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacata 249  Q
    |||||||||| |||||||| ||| |||  | ||||||||||| |||| ||| ||||| ||||||||||||||    
T  2825305 aaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 2825234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 5947153 - 5947247
Alignment:
Q  148 ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||||| ||||| | ||| ||||   |||||||||||| |||||||| ||| | |||||| |||||||||| ||| ||||| | ||||||||    
T  5947153 ataaaataaagttaaactgtatttgtata---actataagctgtattcataagctatctaggagaagttatgaaaataagctgaaaagagcttatgaa 5947247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 9038111 - 9038189
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||| ||||||||||||  |||  |||||||||| ||||||| ||| |||||||| |||||||||| ||| |||||||    
T  9038111 ctataaactgttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa-ttatgaacatgtcataagctgt 9038189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 12110359 - 12110402
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||    
T  12110359 ctataagctgttttcataagctatcttgaagaacttatgaaaat 12110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 27508074 - 27508153
Alignment:
Q  60 cctatttagataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttcta 139  Q
    ||||||| |||||||| ||||||||   ||||||||   ||||||| ||||||||||  ||| |||||||||||||||||    
T  27508074 cctattttgataaacagcttaatttgcagcttataaccaaaacacttatcatataagcacttgtgaataagttatttcta 27508153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 33678766 - 33678845
Alignment:
Q  168 gtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||| || || |||||||||||||||||||| ||| ||||| ||||| ||||||| ||  ||||||| || |||||||    
T  33678766 gtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaaca 33678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 40689105 - 40688993
Alignment:
Q  132 tatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccg 230  Q
    |||||||| | ||||| |||||||||||| ||| |||  ||| ||| || ||||||||||| |||||||| |||  |||| ||||||||||||| |||      
T  40689105 tatttctatagcaaaagataaaataaagttaaattat--tttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctc 40689008  T
Q  231 aaaacaacttatgaa 245  Q
    |||||| ||||||||    
T  40689007 aaaacagcttatgaa 40688993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 43648240 - 43648303
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||||||||||||||| ||| ||||||||  ||||||||| ||  ||||| ||||||||||    
T  43648240 tataagctgttttcataagctatcttggagaaaatatgaaaataagttgaaaagaacttatgaa 43648303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 46280343 - 46280300
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||    
T  46280343 ctataagctgtttttataagctatattggagaacttatgaaaat 46280300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 1350382 - 1350348
Alignment:
Q  111 tataagtgcttatgaataagttatttctacaacaa 145  Q
    ||||||||||||||||||||||||||||| |||||    
T  1350382 tataagtgcttatgaataagttatttctataacaa 1350348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 45078219 - 45078265
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaataaaa 153  Q
    |||||||||||||||||| ||||| ||||| || |||||||||||||    
T  45078219 atcatataagtgcttatgtataagctatttttataacaaaaataaaa 45078265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 22551466 - 22551397
Alignment:
Q  191 ttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||||||| || ||||||| |||||| |||| ||| ||||||||| | ||||||| ||| |||||||    
T  22551466 ttttcataagtaatcttggagagcttatgtaaataagctgaaaacaacatttgaacatgtcataagctgt 22551397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 25827320 - 25827410
Alignment:
Q  109 catataagtgcttatgaataagttatttctacaacaaa-aataaaataaagtaaaactatgtttttatacaaactataagctgttttcataag 200  Q
    |||||||| ||||||||||||  |||||||||| ||||  |||||||||| |||||   ||||| | || || ||||||||||||||||||||    
T  25827320 catataagcgcttatgaataaactatttctacagcaaacgataaaataaactaaaa--ttgtttgtgtaaaatctataagctgttttcataag 25827410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 37064535 - 37064482
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    ||||||||||||||| |||| |||||| ||| |||||||||||| ||| |||||    
T  37064535 ctataagctgttttcgtaagctattttagaggacttatgaaaataagctgaaaa 37064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 38010699 - 38010780
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||| ||| || |||||||||||||||||||  |||  | ||||||||||| |||| |||  |||||| |||||||||||    
T  38010699 tgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacat 38010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 39907788 - 39907869
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||| || || |||||| ||||||||||||  ||| || ||||||| |||||||| ||| ||||||| || ||||||||    
T  39907788 tgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacat 39907869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 40438986 - 40439037
Alignment:
Q  97 ataaacactaatcatataagtgcttatg---aataagttatttctacaacaa 145  Q
    ||||||||||||||||||||||||||||   || |||||||||||| |||||    
T  40438986 ataaacactaatcatataagtgcttatgtataacaagttatttctataacaa 40439037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 46104373 - 46104332
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaa 222  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  46104373 ctataaactgttttcataagttatcttgaagaacttatgaaa 46104332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 46213729 - 46213782
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    |||||||||||||||||| | ||| |||||||| ||||||| ||||||||||||    
T  46213729 atcatataagtgcttatgtaaaagctatttctataacaaaatataaaataaagt 46213782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 47177621 - 47177678
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||| ||| || |||||||||||||||| ||| ||| |||||||| ||||||||||    
T  47177621 tgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaat 47177678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 49019867 - 49019920
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    ||||||||| |||| ||||||||| ||| ||||||||||||||| | |||||||    
T  49019867 ctataagctatttttataagttatattgtagaacttatgaaaataaaccgaaaa 49019920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 49060466 - 49060556
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaac-aaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcata 198  Q
    |||||||||||  ||||| ||||| |||||||| ||| |||||||||||||||| ||| ||  |||||||| || ||||||| | ||||||||    
T  49060466 atcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaatta--tttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 991178 - 991218
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  991178 atcatataagtgcttgtgtataagttatttctgcaacaaaa 991218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 991996 - 992048
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaac-aaaaataaaataaag 158  Q
    |||||||||||||||| | ||||||| |||||| ||| |||||||||||||||    
T  991996 atcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaag 992048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 3279706 - 3279638
Alignment:
Q  97 ataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaa-taaaataaagtaaaac 164  Q
    ||||| |||||| |||||  |||||||| |||||||||||||| |||||||| | ||||||||| ||||    
T  3279706 ataaatactaattatatatttgcttatgtataagttatttctataacaaaaactcaaataaagtcaaac 3279638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 15309633 - 15309593
Alignment:
Q  184 taagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||| |||||||||||||||||| |||||| ||||||||||    
T  15309633 taagttgttttcataagttatttcggagaatttatgaaaat 15309593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 25596032 - 25596092
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    |||||| || |||||||||| ||| ||||||| ||||||||||| ||  ||||||||||||    
T  25596032 ctataaactcttttcataagctatcttggagagcttatgaaaataagttgaaaacaactta 25596092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 34744028 - 34744080
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    |||||| |||||||||||| ||| ||||||||||||| ||||| || ||||||    
T  34744028 tataagttgttttcataagctatattggagaacttataaaaataaggcgaaaa 34744080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 39279762 - 39279826
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||| ||||||||||||| ||||| ||||||| ||||| ||| | ||| ||||| ||||    
T  39279762 ctataagctggtttcataagttatcttggaaaacttataaaaattagctgtaaaaaacttgtgaa 39279826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 43250755 - 43250691
Alignment:
Q  196 ataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||| ||||||||||| |||||||| || | | |||||||||||| |||||| ||| |||||||    
T  43250755 ataagctattttggagagcttatgaatataaactgaaaacaacttacgaacatgtcataagctgt 43250691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 9e-52; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 278 - 389
Target Start/End: Complemental strand, 46187870 - 46187759
Alignment:
Q  278 gtgtttatgccagtagataagctcaaataagatcatccaaacatgtccaccaaacagaatgtctattatttttgtcattgagcatacacatagtgcactt 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46187870 gtgtttatgccagtagataagctcaaataagatcatccaaacatgtccaccaaacagaatgtctattaattttgtcattgagcatacacatagtgcactt 46187771  T
Q  378 gctagttattta 389  Q
    | ||||||||||    
T  46187770 gatagttattta 46187759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 249
Target Start/End: Original strand, 17883954 - 17884135
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcata-taagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaact 165  Q
    ||||||||||||||||||  |||||||  ||||  ||| |||||  |||||||| |||  |||| |||||||| ||||||| |||||||||||| ||| |    
T  17883954 gataaacaacttaatttttagcttatagcataaggacttatcatggtaagtgctcatgtgtaagctatttctataacaaaagataaaataaagttaaatt 17884053  T
Q  166 atgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacata 249  Q
      |||||| || ||  ||| || |||||||||||| ||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  17884054 --gtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaacata 17884135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 7694095 - 7694014
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||| || || ||||||||||||||||||||||||  ||||||  ||||| |||| ||| |||||||||||||||||||    
T  7694095 tgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacat 7694014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 18628628 - 18628555
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactt 240  Q
    |||||||||| ||  ||||| ||||||||||||||||| ||||||| |||||| |||| ||| |||||||||||    
T  18628628 tgtttttatataagttataaactgttttcataagttatcttggagagcttatggaaataagctgaaaacaactt 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 19304806 - 19304871
Alignment:
Q  59 acctatttagataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatg 124  Q
    |||||||||||||||||||||||||  ||||||||  ||||||| ||  |||||||||||||||||    
T  19304806 acctatttagataaacaacttaattaaatgcttatgctataaacgcttctcatataagtgcttatg 19304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 20031748 - 20031801
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||| |||||    
T  20031748 ctataagcagttttcataagctattttagagaacttatgaaaatgagctgaaaa 20031801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 30024626 - 30024683
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaa 163  Q
    ||||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  30024626 atcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaa 30024683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 42685409 - 42685490
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||| || || || |||| |||||||||||| ||||||||||||| | ||||||| |||| |||||||||||| |||||    
T  42685409 tgtttttttataagctctaagttgttttcataagctattttggagaacgtgtgaaaataagccaaaaacaacttataaacat 42685490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 50004229 - 50004160
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaaca 236  Q
    |||||| ||| |||| || |||||||||| |||||||| ||||||||||||||||||| ||| |||||||    
T  50004229 tgttttcatataaacaatgagctgttttcctaagttatcttggagaacttatgaaaataagctgaaaaca 50004160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 24443945 - 24444066
Alignment:
Q  88 gcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataa 186  Q
    |||||||  |||| |||| ||||||||||| |||||| |||||  ||||||||||||||| |||||||||| | |||| |  |||| ||| || ||||||    
T  24443945 gcttatagcataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaa--ttttcatataagctataa 24444042  T
Q  187 gctgttttcataagttattttgga 210  Q
    | |||||||||||| |||| ||||    
T  24444043 gttgttttcataagctattgtgga 24444066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 53673728 - 53673660
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatat 250  Q
    ||||| ||||||||||||| ||| ||||||| |||||| |||| ||| |||||||||||||| ||||||    
T  53673728 tataaactgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacatat 53673660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 33534294 - 33534178
Alignment:
Q  126 ataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||| |||||||| |||| |||||||||| | ||||   |||| |||| || ||| ||| ||||||| ||| ||||||| |||| |||||||||||    
T  33534294 ataagttagttctacaataaaagataaaataaaatcaaacc--gtttctatataatctacaagttgttttcgtaaattatttttgagagcttatgaaaat 33534197  T
Q  225 gagccgaaaacaacttatg 243  Q
     ||| ||||||||||||||    
T  33534196 aagctgaaaacaacttatg 33534178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 52315267 - 52315204
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||| ||||| |||||| ||||||||| ||||||||||||| ||| |||| |||||||||||    
T  52315267 tataagttgtttccataagctattttggaaaacttatgaaaataagctgaaagcaacttatgaa 52315204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 825552 - 825506
Alignment:
Q  190 gttttcataagttattttggagaacttatgaaaatgagccgaaaaca 236  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaaca 825506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 23819016 - 23819167
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattt 206  Q
    |||||| ||||| ||||| |||||||||||| | |||||| |||||||  ||| ||||  |||||| ||| ||  |||||  |||||||||||| ||| |    
T  23819016 atcatacaagtgtttatgtataagttatttccataacaaatataaaatgtagtcaaac--tgttttcatataagttataacatgttttcataagctatct 23819113  T
Q  207 tggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    || ||| |||||  |||| ||  |||||||||||||| |||| ||| |||||||    
T  23819114 tgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgt 23819167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 49219065 - 49219200
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    ||||||| |||| ||| | |||||||||||||| ||||||| |||||||||||| ||| ||  |||| ||| || ||||||| |||||||||||  |||     
T  49219065 atcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaaatta--ttttcatataagctataagttgttttcataaactatc 49219162  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    ||  |||  ||||| |||| ||| ||||||||||||||    
T  49219163 ttaaagagattatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 3155543 - 3155657
Alignment:
Q  121 tatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatg 219  Q
    |||| ||||| |||||||| | ||||| |||||||||||| ||| |  |||||| ||||| ||| |||||||||||||||  ||| ||| |||||| |||    
T  3155543 tatgtataagctatttctatagcaaaagataaaataaagttaaatt--gtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatg 3155640  T
Q  220 aaaatgagccgaaaaca 236  Q
    ||||| ||| |||||||    
T  3155641 aaaataagctgaaaaca 3155657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 29263371 - 29263448
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||| |||||||||||| |||  || ||| ||| || |||| ||| ||||||||||||||||||||||| |||||||    
T  29263371 ataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatcataagctgt 29263448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 30207719 - 30207582
Alignment:
Q  102 cactaatcatataagtgcttatgaataagttatttctacaac-aaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataag 200  Q
    |||| |||||||||||||||||| ||| |||| ||||| ||| |||||||||||||| | ||||  |||||| ||| || ||||||| ||||||||||||    
T  30207719 cacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaac--tgttttcatataagctataagttgttttcataag 30207623  T
Q  201 ttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
     ||  || ||||  ||||| |||| ||| ||||||| ||||    
T  30207622 ctaccttagagagattatggaaataagctgaaaacagctta 30207582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 17822936 - 17822872
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||| |||  |||| | ||||||||    
T  17822936 ctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaa 17822872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 24193472 - 24193572
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaacta 166  Q
    ||||||||||||||||     ||||||  |||||| || ||||||||||| |||||| ||||||||||| |||||||||| |||||| | ||| ||||||    
T  24193472 gataaacaacttaattgagcacttatagcataaacgcttatcatataagtacttatgtataagttatttttacaacaaaatataaaacagagttaaacta 24193571  T
Q  167 t 167  Q
    |    
T  24193572 t 24193572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 224
Target Start/End: Original strand, 44319866 - 44319991
Alignment:
Q  97 ataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttca 196  Q
    |||| |||| |||||||||||||| ||| ||||  |||||||| || ||| ||||||||||||  |||  |||||| ||| || ||| ||||| |||| |    
T  44319866 ataagcacttatcatataagtgctcatgtataaactatttctataaaaaagataaaataaagtcgaac--tgttttcatataagctacaagctattttga 44319963  T
Q  197 taagttattttggagaacttatgaaaat 224  Q
    |||| |||  | ||||||||||||||||    
T  44319964 taagctatcctagagaacttatgaaaat 44319991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 47800623 - 47800691
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatat 250  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||| ||| ||||||  ||||| |||||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaaccgcttataaacatat 47800691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 47970245 - 47970305
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactat 167  Q
    ||||||||||||||||| ||||| |||||||| ||||||| ||||||| |||| |||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactat 47970305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 252
Target Start/End: Complemental strand, 54325190 - 54325037
Alignment:
Q  98 taaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttca 196  Q
    |||| ||| ||||||||||||||| || ||||  ||||||||  |||||| |||||||||||| ||||  |||||| ||| || ||||||||| ||||||    
T  54325190 taaatacttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaac--tgttttcatataagctataagctattttca 54325093  T
Q  197 taagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatca 252  Q
     ||| |||  ||||||  ||||| | || | | ||||||| |||||| ||||||||    
T  54325092 aaagctatcatggagagtttatggagataaactgaaaacagcttatggacatatca 54325037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 55414483 - 55414427
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||||||||| ||||||||||||||||||| ||  ||||| | ||||||||    
T  55414483 tgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaa 55414427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 1075558 - 1075597
Alignment:
Q  269 gtttcagatgtgtttatgccagtagataagctcaaataag 308  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  1075558 gtttcacaagtgtttatgccagtagataagctcaaataag 1075597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 8468955 - 8469014
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||||||||||||| | |||| ||||||||||| | | |||||||||||||| ||||    
T  8468955 tgttttcataagttattctagagagcttatgaaaataatctgaaaacaacttatggacat 8469014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 16200052 - 16200009
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||    
T  16200052 ctataagctgttttcataagctatcttggaggacttatgaaaat 16200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 28623218 - 28623281
Alignment:
Q  110 atataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttt 172  Q
    ||||||||||||||| ||||||||||| || ||||||| ||||||||| || ||||| ||||||    
T  28623218 atataagtgcttatgtataagttatttatataacaaaagataaaataatgttaaactgtgtttt 28623281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 43932434 - 43932501
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||| || ||||||||||||||| || ||||||| ||||||| ||  |||||||||||||| ||||    
T  43932434 ctataaactattttcataagttattctgaagaacttgtgaaaataagatgaaaacaacttatggacat 43932501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 46860276 - 46860327
Alignment:
Q  88 gcttataatataaacactaatcatataagtgcttatgaataagttatttcta 139  Q
    |||||||  ||||||||| || ||||||||||||||||||||| ||||||||    
T  46860276 gcttatagcataaacacttatgatataagtgcttatgaataagatatttcta 46860327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 54986309 - 54986400
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagt 159  Q
    |||||||||||||| |  | | |||||  |||||| | ||||||||||||  ||||| ||||| |||||||| ||||||||||| |||||||    
T  54986309 gataaacaacttaaataaaagtttatagcataaacgccaatcatataagtttttatgtataagctatttctataacaaaaataagataaagt 54986400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 4663836 - 4663770
Alignment:
Q  111 tataagtgcttatgaataagttatttctacaacaaa-aataaaataaagtaaaactatgtttttata 176  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||  ||||||| ||| ||||    
T  4663836 tataagtgcttatgtataagttatttctataacaaagaataaaatgaagccaaactatttttatata 4663770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 19422344 - 19422402
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaac 164  Q
    ||||||||| |||||||| |||||||||||||| ||||||| ||| |||||||| ||||    
T  19422344 atcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaac 19422402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 248
Target Start/End: Original strand, 24929380 - 24929559
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaacta 166  Q
    ||||||||||||||||   || |||||| |||| | || ||||||||| || || || || |  |||||||| ||||||| ||||||||||||  ||||     
T  24929380 gataaacaacttaattgagtgtttataacataatctcttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagtctaact- 24929478  T
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
     ||||| ||| || ||||||| |||||||||||  | |  | |||| |||||| |||| ||| |||||||| ||||||||||    
T  24929479 -gttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaaaacaatttatgaacat 24929559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 30066840 - 30066758
Alignment:
Q  178 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||| ||||||||| ||||||| ||| ||||||| ||||| ||||  ||| |||||||  |||||||||||| | |||||||    
T  30066840 aaactgtaagctgttctcataagctatcttggagagcttataaaaacaagctgaaaacagattatgaacatattataagctgt 30066758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 34398756 - 34398694
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    ||||||||||||||||||||  ||  |||||| |||||| || | ||||||||||||||||||    
T  34398756 ctataagctgttttcataagccatcatggagagcttatggaagtaagccgaaaacaacttatg 34398694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 43824283 - 43824349
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||| ||||| ||||||||  |||| | |||||| |||| ||| |||||||||||||||||||    
T  43824283 tataagcttttttcgtaagttatcctggaaagcttatggaaataagctgaaaacaacttatgaacat 43824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 49202644 - 49202710
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||| ||||||| |||| ||| ||||| |||| |||||||| ||  ||||||||||||||||||    
T  49202644 ctataagttgttttcgtaagctatcttggataactaatgaaaataagttgaaaacaacttatgaaca 49202710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 50298417 - 50298487
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcat-ataagtgcttatgaataagttatttc 137  Q
    ||||||||||||||||| | |||||||  ||||||||| ||||| |||| |||||||| ||||||| ||||    
T  50298417 gataaacaacttaatttgaagcttatagcataaacacttatcatgataaatgcttatgtataagttgtttc 50298487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 55302247 - 55302301
Alignment:
Q  180 actataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    ||||||||||||| ||||||| ||| ||||| ||||||||||||| ||| |||||    
T  55302247 actataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaa 55302301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 2980615 - 2980574
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaa 148  Q
    |||||||||||||||||| ||||| |||||||| ||||||||    
T  2980615 atcatataagtgcttatgtataagctatttctataacaaaaa 2980574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 8469438 - 8469381
Alignment:
Q  191 ttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||||||||| | | |||||| |||| |||| ||| |||||||||||||||||||    
T  8469438 ttttcataagttagtctagagaacctatggaaataagctgaaaacaacttatgaacat 8469381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 25548599 - 25548558
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaa 223  Q
    ||||||||||||||||||| |||||||||||| ||| |||||    
T  25548599 tataagctgttttcataagctattttggagaaattacgaaaa 25548558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 27671972 - 27671923
Alignment:
Q  111 tataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    ||||||||||| || |||||||||||| ||||||||| ||||||||||||    
T  27671972 tataagtgcttgtgtataagttatttccacaacaaaagataaaataaagt 27671923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 27721717 - 27721778
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    |||||||||||||||||||||||  |||||| |||  |||||| ||| ||||||| ||||||    
T  27721717 tataagctgttttcataagttatcctggagagcttgcgaaaataagctgaaaacagcttatg 27721778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 52746909 - 52746844
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||||||||||| ||| ||| |   ||||||||||| ||| ||||||| |||||||||||    
T  52746909 ataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacat 52746844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 942176 - 942136
Alignment:
Q  184 taagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||||||||||||||| |||| |||||||||||| |||||    
T  942176 taagctgttttcataagctattatggagaacttataaaaat 942136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 4191665 - 4191705
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    |||||||||||||||||| ||||| |||||||| |||||||    
T  4191665 atcatataagtgcttatgtataagctatttctataacaaaa 4191705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 20109009 - 20109061
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    ||||||||||||| ||||| ||| || |||||||| |||||||||| ||||||    
T  20109009 tataagctgtttttataagatatattagagaacttttgaaaatgagtcgaaaa 20109061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 24160648 - 24160547
Alignment:
Q  98 taaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttca 196  Q
    ||||| || ||||||||||||||||| |||||| | |||||| ||||||| |||| ||||| | ||||||  |||| ||  || ||||||| ||||||||    
T  24160648 taaacgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaacta--ttttcatgtaagctataagttgttttca 24160551  T
Q  197 taag 200  Q
    ||||    
T  24160550 taag 24160547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 27616452 - 27616412
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    ||||||||  ||||||||||||| |||||||||||||||||    
T  27616452 atcatatacatgcttatgaataatttatttctacaacaaaa 27616412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 36734784 - 36734880
Alignment:
Q  72 aacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactat 167  Q
    ||||||||||||  | |||||||| ||| ||  | |||||||||||||||||| ||||  | |||||| |||||||  ||||||||||| |||||||    
T  36734784 aacaacttaattaaaagcttataacatatacctttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactat 36734880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 41088311 - 41088367
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaa 163  Q
    ||||||||||||||||| ||||  |||||  ||||||||| ||||||||||||||||    
T  41088311 tcatataagtgcttatgtataaactattttcacaacaaaagataaaataaagtaaaa 41088367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 107 - 252
Target Start/End: Complemental strand, 28769483 - 28769339
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    ||||||||| |||||||| ||||| |||| ||| ||||||  ||||||| |||| ||||||| || |||||  | |||||||||||||||||||| ||||    
T  28769483 atcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttata--agctataagctgttttcataagctatt 28769386  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacatatca 252  Q
    |||||||  ||||| |||| ||| |||||||||||||| ||||||||    
T  28769385 ttggagagtttatggaaataagctgaaaacaacttatggacatatca 28769339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 30389087 - 30389165
Alignment:
Q  170 ttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||| || ||||| |||||||||||||| | |  | |||||||||||||||| ||| |||||||||||||||||||    
T  30389087 ttttatataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacat 30389165  T

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Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 164
Target Start/End: Original strand, 34563136 - 34563234
Alignment:
Q  67 agataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaa-aataaaataaagtaaaac 164  Q
    |||||||||||||||||  | |||||||  ||||||| | |||||||||||||||||  ||||||||||||||  |||||  |||||||||||| ||||    
T  34563136 agataaacaacttaattaaacgcttatagcataaacatttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaaac 34563234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 9956884 - 9956819
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||| |||||||||||  ||| ||||||||||||||||||| ||| |||||| |||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 33714337 - 33714241
Alignment:
Q  148 ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||| ||||||   |||| ||||| ||||||||| |||||||||| ||| | ||||| ||||| ||||| ||| ||||||| ||||||||||    
T  33714337 ataaaataaagtcaaacta---ttttgtacaatctataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaaca 33714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 40280349 - 40280292
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaa 163  Q
    ||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||||    
T  40280349 atcatataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaa 40280292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 27028830 - 27028894
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||| ||| ||||| | ||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaa 27028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 35869744 - 35869865
Alignment:
Q  88 gcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataa 186  Q
    |||||||  |||| |||| ||||||||||| |||||| |||||  ||||||||||||||| |||||||||| | |||| |  |||| ||| || ||||||    
T  35869744 gcttatagcataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaa--ttttcatataagctataa 35869841  T
Q  187 gctgttttcataagttattttgga 210  Q
    | |||||||||||| |||| ||||    
T  35869842 gttgttttcataagctattgtgga 35869865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 40728562 - 40728421
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcat-aagttat 204  Q
    |||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| ||||  ||||||| |||||   |||| ||||||| || |||||||    
T  40728562 atcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaaac--tgtttttttacaagtcataacctgttttaataaagttat 40728465  T
Q  205 tttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
     |||||  ||||||| |||| | | ||||| | |||||||||||    
T  40728464 cttggaatacttatggaaataaactgaaaatatcttatgaacat 40728421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 26820144 - 26820216
Alignment:
Q  126 ataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataa 199  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| || ||||  ||||||||||| ||||||||||    
T  26820144 ataagttatttctataacaaaagataaaataaagtcaaactattttgttat--aaactataagccgttttcataa 26820216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 42597331 - 42597419
Alignment:
Q  111 tataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataag 200  Q
    ||||||| |||||| ||||| |||||||| ||||||| |||||||||||||||| |  ||||| || ||| ||||||| ||||||||||||    
T  42597331 tataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaatt--gttttcatgcaagctataagttgttttcataag 42597419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 11569527 - 11569449
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||||||||||||||| |||  ||||||  || ||||||| ||| |||||||||||||| |||| ||| |||||||    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgt 11569449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 14905125 - 14905236
Alignment:
Q  111 tataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgg 209  Q
    |||||| ||||||||||||| ||||| || |||| || |||||||||||| |||||  |||||| | ||| || |||||| ||||||||||||||  |||    
T  14905125 tataagagcttatgaataagctatttatagaacataacataaaataaagtcaaact--gtttttgtccaatctttaagctattttcataagttatcctgg 14905222  T
Q  210 agaacttatgaaaa 223  Q
    | | ||||||||||    
T  14905223 atatcttatgaaaa 14905236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 1930035 - 1930100
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||||||||||||||| ||| |||| || ||| ||||||| ||| ||||||| ||||||||||    
T  1930035 tataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaaca 1930100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 35534676 - 35534631
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    |||||||||||||||| ||||||||||||||||| | |||||||||    
T  35534676 tgttttcataagttatattggagaacttatgaaagtaagccgaaaa 35534631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 42215143 - 42215086
Alignment:
Q  191 ttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||| ||| ||||||| |||||| |||| ||| |||||||||||||||||||    
T  42215143 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacat 42215086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 260
Target Start/End: Original strand, 42764252 - 42764345
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||| |||||| ||||||||| ||||||||||||||  || ||| ||||  ||||| ||||| |||||||||||| || | | |||||||||    
T  42764252 tgttttcatacaagctataagctattttcataagttatcctgaagagcttaataaaatcagccgtaaacaacttatggacttgttaaaagctgt 42764345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 38874648 - 38874688
Alignment:
Q  184 taagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  38874648 taagctgttttcataagctattttggagaacatatgaaaat 38874688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 10114488 - 10114543
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaaca 236  Q
    ||||||||||||||||| || ||| ||||||||| ||||||||| ||| |||||||    
T  10114488 ctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaaca 10114543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 12361177 - 12361268
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagct 258  Q
    |||||| ||| || |||||||||||||||||||||||||  ||||| || ||| |||| ||  ||||||| |||||| |||| ||| |||||    
T  12361177 tgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaataagttgaaaacagcttatggacatgtcataagct 12361268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 27754401 - 27754464
Alignment:
Q  179 aactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    |||||||||  ||||||||||| ||||||||||| ||||||||||| ||| |||  ||||||||    
T  27754401 aactataagtggttttcataagctattttggagagcttatgaaaataagctgaacgcaacttat 27754464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 29699134 - 29699233
Alignment:
Q  61 ctatttagataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    |||||| ||||||| ||||| ||   ||||||||  ||||| | | ||||||||| |||||||| | |||||||||||| ||||||| ||||||||||||    
T  29699134 ctatttggataaacgacttagttaagtgcttatagcataaatatttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagt 29699233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 30259121 - 30259192
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||| |||| |||| |||||||||||||| |||| | | |||||||||||||  |||||||| |||||||    
T  30259121 tgtttttataaattatcttggagaacttatggaaataaactgaaaacaacttatagacatatcataagctgt 30259192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 243
Target Start/End: Original strand, 31862438 - 31862554
Alignment:
Q  126 ataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||||| | ||||||| |||| ||||||| |||||||  |  ||||  | ||||||| ||||||||||||||||  | |||| |||||||||||    
T  31862438 ataagttatttcaataacaaaagataatataaagtcaaactattctcgtata--agctataagatgttttcataagttatcctagagagcttatgaaaat 31862535  T
Q  225 gagccgaaaacaacttatg 243  Q
     ||| ||||||| ||||||    
T  31862536 aagctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 41620435 - 41620295
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||| ||||||||||  ||||||||||| |  ||||||| |||||||||||| ||| ||||||  ||||    ||| |||||||||| ||||| |||     
T  41620435 atcatacaagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatatatt--ctaaaagctgtttttataagctatc 41620338  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||  || ||| ||||||| ||| |||||||||||||| ||||    
T  41620337 ttgtcgagcttttgaaaataagcggaaaacaacttatggacat 41620295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 2107470 - 2107362
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattt 206  Q
    ||||||||||| |||||| |||||||||||||||  |||| |||||||  ||| |||   |||||| | | ||||||||  ||||||||||||| ||| |    
T  2107470 atcatataagttcttatgtataagttatttctaccgcaaagataaaat--agtcaaa--ttgttttcacataaactatagcctgttttcataagctatct 2107375  T
Q  207 tggagaacttatg 219  Q
    |||||| ||||||    
T  2107374 tggagagcttatg 2107362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 2699251 - 2699293
Alignment:
Q  126 ataagttatttctacaacaaaa-ataaaataaagtaaaactat 167  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  2699251 ataagttatttctacaacaaaatataaaataaagttaaactat 2699293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 5069697 - 5069763
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||||||||||||||| ||| || || | ||||||||||| ||| |||||  ||||||||||||    
T  5069697 tataagctgttttcataagatatcttcgaaagcttatgaaaataagctgaaaatgacttatgaacat 5069763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 9130276 - 9130238
Alignment:
Q  282 ttatgccagtagataagctcaaataagatcatccaaaca 320  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  9130276 ttatgccagtagataagctcaaataagctaatccaaaca 9130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 9700110 - 9700152
Alignment:
Q  278 gtgtttatgccagtagataagctcaaataagatcatccaaaca 320  Q
    |||||||||| |||||||||||||||||||| | |||||||||    
T  9700110 gtgtttatgctagtagataagctcaaataagttaatccaaaca 9700152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 14247298 - 14247240
Alignment:
Q  178 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaaca 236  Q
    |||||||||||||||||| |||| |||  | |||||||||||||||| ||| |||||||    
T  14247298 aaactataagctgttttcgtaagatatcgtagagaacttatgaaaataagctgaaaaca 14247240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 30918122 - 30918176
Alignment:
Q  191 ttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||||| | ||||||| |||||| |||| ||| ||||||||||||||||    
T  30918122 ttttcataagttttcttggagagcttatggaaataagctgaaaacaacttatgaa 30918176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 32506988 - 32507038
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaa 161  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||||| ||||    
T  32506988 ataagtgtttatgtataagttatttctacaacaaaagataaaataacgtaa 32507038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 42476034 - 42476072
Alignment:
Q  110 atataagtgcttatgaataagttatttctacaacaaaaa 148  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  42476034 atataagtgcttatgaataagttatttctgtaacaaaaa 42476072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 43504750 - 43504816
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||| |||||| ||||| ||| |||||||||||||| |||| ||| ||||||| ||||| ||||    
T  43504750 ctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaaca 43504816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 43718007 - 43717945
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatga 244  Q
    |||||||||||| |||||| ||| ||||||||||||||||| | |||  |||||| |||||||    
T  43718007 tataagctgtttgcataagctatcttggagaacttatgaaagtaagctaaaaacagcttatga 43717945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 1113058 - 1113123
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||| ||||   ||| ||||||||||||||||||| |||  |||||| ||||||||||    
T  1113058 tataagctgtttacatacactatcttggagaacttatgaaaattagctaaaaacagcttatgaaca 1113123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 2482833 - 2482932
Alignment:
Q  148 ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||| |||  |||||||| || || |||||||||||||||||  | ||| ||||| |||||||  |||| ||| ||||||| |||||||||     
T  2482833 ataaaataaagtcaaa--atgtttttgtataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttatgaact 2482928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 11188297 - 11188248
Alignment:
Q  109 catataagtgcttatgaataagttatttctacaacaaaa-ataaaataaa 157  Q
    |||||||||||||||| ||||||| |||||| ||||||| ||||||||||    
T  11188297 catataagtgcttatgtataagttgtttctataacaaaagataaaataaa 11188248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 14482128 - 14482181
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    |||||||||||||||||| ||||  |||||||| ||||||| ||||||||||||    
T  14482128 atcatataagtgcttatgtataaactatttctataacaaaagataaaataaagt 14482181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 20672756 - 20672825
Alignment:
Q  188 ctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagc 257  Q
    ||||||| ||||| |||  |||||| ||||||||||| ||| ||||||| ||||||||||| ||| ||||    
T  20672756 ctgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagc 20672825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 26813949 - 26813908
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaa 148  Q
    |||||||||||||||||| |||| ||||||||| ||||||||    
T  26813949 atcatataagtgcttatgtataaattatttctataacaaaaa 26813908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 29168962 - 29168921
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaa 223  Q
    |||||||||||||| |||||||| ||||| ||||||||||||    
T  29168962 tataagctgttttcctaagttatattggaaaacttatgaaaa 29168921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 44236887 - 44236834
Alignment:
Q  188 ctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||| ||||| ||||||    
T  44236887 ctgttttcataagctatattggagagcttatgaaaataagctgaaaataactta 44236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 4281552 - 4281612
Alignment:
Q  189 tgttttcataagttat-tttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||| |||||| | ||||||||| |||||||||| ||  |||||||||||||||||||    
T  4281552 tgttttcttaagttgtctttggagaatttatgaaaataagatgaaaacaacttatgaacat 4281612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 7514563 - 7514643
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||| ||| || ||| |||||||||||||||| ||||||| ||||||  ||||||| ||  | ||||| ||||||||||    
T  7514563 tgttttcatataagctacaagctgttttcataagctattttgcagaactagtgaaaattagttggaaacagcttatgaaca 7514643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 26215427 - 26215483
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactat 167  Q
    ||||| ||||||| ||||| |||||||| ||||||| |||||||||||| |||||||    
T  26215427 ataagcgcttatgtataagctatttctataacaaaagataaaataaagttaaactat 26215483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 248
Target Start/End: Complemental strand, 39866878 - 39866738
Alignment:
Q  110 atataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt-aaaactatgtttttatacaaactataagctgttttcata--agttatt 205  Q
    |||||| |||||||| | ||| ||| |||| ||||||| |||||||||||| ||||||  ||||| ||| |||||||||  ||||||||||  || |||     
T  39866878 atataaatgcttatgcacaagctatctctataacaaaagataaaataaagtcaaaact--gttttcataaaaactataaattgttttcatataagctatc 39866781  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||| ||| ||||||||||| | | ||||||| |||||| ||||    
T  39866780 ttgaagagcttatgaaaataaactgaaaacagcttatggacat 39866738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 43208315 - 43208239
Alignment:
Q  69 ataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaa 145  Q
    |||||||||||||||   |||||||| |||||||  | |||||||||||  ||||| ||||| |||||||| |||||    
T  43208315 ataaacaacttaattaagtgcttatagtataaacgttcatcatataagtatttatgtataagctatttctataacaa 43208239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 245
Target Start/End: Original strand, 33234292 - 33234424
Alignment:
Q  111 tataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgga 210  Q
    ||||||||||| || ||||||||||||||| ||||| ||||||| |||| ||||  |||||||||| || ||||||||| ||||| ||||||||  || |    
T  33234292 tataagtgcttgtgtataagttatttctacgacaaatataaaatgaagtcaaac--tgtttttatataagctataagctattttcgtaagttatgctgaa 33234389  T
Q  211 gaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    || |||||| |||||||  |||||||| |||||||    
T  33234390 gagcttatgtaaatgagttgaaaacaagttatgaa 33234424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 31694444 - 31694579
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||||| |||||| ||||  ||||||||||||||||||||| |||| || |||| |       
T  31694444 atcatataagtgcttatgaataagctatgtctataacaaaacataaactaaagtcaaac--tgtttttatacaaactataagttgttctcttaagctcac 31694541  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    ||| ||| ||||||||||| ||  ||||||||||||||    
T  31694542 ttgtagagcttatgaaaataagttgaaaacaacttatg 31694579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 247
Target Start/End: Complemental strand, 9202887 - 9202753
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgga 210  Q
    ||||||||||||  ||||| |||||||  | ||||| |||||||||||| ||| |  ||||| ||| || | |||||||||||||||||||||| ||| |    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaatt--gttttcatataagcaataagctgttttcataagttatcttgaa 9202790  T
Q  211 gaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||||| ||| | ||||| ||||||||||    
T  9202789 gaacttatgaaaataagctggaaacagcttatgaaca 9202753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 242
Target Start/End: Complemental strand, 18704180 - 18704046
Alignment:
Q  106 aatcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||||||||| |||||| |||||||||||||| |||||||   ||||||||| || |||  |||||||| || ||||||| |||||||||||| ||||    
T  18704180 aatcatataagttcttatgtataagttatttctataacaaaagataaataaagtcaagcta--tttttatataagctataagttgttttcataagctatt 18704083  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
        ||| |||||| |||| ||| |||||||||||||    
T  18704082 acaaagatcttatggaaataagctgaaaacaacttat 18704046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 4014493 - 4014429
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||| ||||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 13604935 - 13604841
Alignment:
Q  166 atgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||| ||| ||||| ||||||||||||||||||||| ||| ||| ||||||||||| ||  ||||||||| |||| |||| ||| |||||||    
T  13604935 atgttttcatataaactttaagctgttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgt 13604841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 41957521 - 41957443
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||||||||||||||| |||  | |||||||||||||||| ||  |||||||||||||| |||| ||| |||||||    
T  41957521 tataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgt 41957443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 7319078 - 7319017
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||| ||| || |||||||||||    
T  7319078 tataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 7319017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 12425570 - 12425631
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||| ||  |||||||||||||    
T  12425570 ctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttat 12425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 37588444 - 37588364
Alignment:
Q  168 gtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||| ||| || ||||||| ||||||||||||||||| |||||| |||||| |||| ||| ||||||| ||||| |||||    
T  37588444 gttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacat 37588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 913050 - 912995
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttat 123  Q
    ||||||||||||||||  ||||||||| |||||||||| ||||||||||| |||||    
T  913050 gataaacaacttaattaaatgcttatactataaacacttatcatataagtacttat 912995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 15402900 - 15402829
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatca 252  Q
    ||||||| |||||||||||  |||||| |||||| |||  |||| ||| |||||||||||||||||||||||    
T  15402900 ctataagttgttttcataacctattttagagaacgtatagaaattagctgaaaacaacttatgaacatatca 15402829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 27104594 - 27104527
Alignment:
Q  71 aaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttct 138  Q
    |||||||| ||||| | |||||||  ||||||||| |||||||||||||||| | |||||||||||||    
T  27104594 aaacaactcaatttaacgcttatagcataaacacttatcatataagtgcttacgtataagttatttct 27104527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 32059742 - 32059642
Alignment:
Q  97 ataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttca 196  Q
    ||||| ||| |||||||||||||||||| ||||| | ||| |  ||| || |||||||||||| ||||  |||||| ||| || ||||||||||||||||    
T  32059742 ataaatacttatcatataagtgcttatgtataagctgtttttgtaactaagataaaataaagtcaaac--tgttttcatataagctataagctgttttca 32059645  T
Q  197 taa 199  Q
    |||    
T  32059644 taa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 41981951 - 41981872
Alignment:
Q  166 atgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||| || ||||||||||||||||||||||  |||||| ||||||||| |||||| |||  ||| || ||||||||    
T  41981951 atgtttttgtataaactataagctgttttcataaactatttttgagaacttacgaaaataagctaaaagcagcttatgaa 41981872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 11707055 - 11707121
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||||||||||||||| ||| ||| ||| ||| ||||||| ||| ||||||||||||| |||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacat 11707121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 21768283 - 21768189
Alignment:
Q  166 atgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||| ||| ||||| ||||||||||||||||||||| ||| ||| |||| |||||| ||  ||||||| | |||| |||| ||| |||||||    
T  21768283 atgttttcatataaactttaagctgttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataagctgt 21768189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 26516185 - 26516275
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaa 157  Q
    ||||||||||||||||    |||||||  |||| | || |||||||||||||||||| ||||| |||||||| ||||||| ||||||||||    
T  26516185 gataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 28413358 - 28413288
Alignment:
Q  178 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||| ||||| |||||||||||| |||||||  ||||| |||| ||| ||||||| |||||||||||    
T  28413358 aaactatacgctgtgttcataagttatcttggagagtttatggaaataagctgaaaacagcttatgaacat 28413288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 32942617 - 32942659
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaa 223  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  32942617 ctataagctgttttcataagctatcttggagaacttatgaaaa 32942659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 39105463 - 39105529
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||| |||  |||| | ||||||||||    
T  39105463 ctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaaca 39105529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 1550830 - 1550952
Alignment:
Q  113 taagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggaga 212  Q
    |||||||||||| |||||||| |||||||| ||||  | || ||| | ||| |  | |||||||||| ||||||||||||||||||||||||  || |||    
T  1550830 taagtgcttatgtataagttaattctacaagaaaagaagaacaaatttaaatt--gcttttatacaagctataagctgttttcataagttatactgaaga 1550927  T
Q  213 acttatgaaaatgagccgaaaacaa 237  Q
     ||||||| ||| ||  ||||||||    
T  1550928 gcttatgacaataagatgaaaacaa 1550952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 3977309 - 3977386
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||||||||||||||||| || ||||||| |||||||||| ||| ||| ||| || | |||||| ||| |||||||    
T  3977309 ataagctgttttcataagttgttgtggagaaattatgaaaataagctgaagacagctaaggaacatgtcataagctgt 3977386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 14182450 - 14182386
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||||||||||||||  || ||||||||||||||| ||  |||||||| |||||||||    
T  14182450 tataagctgttttcataagttatcctg-agaacttatgaaaataagttgaaaacaatttatgaaca 14182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 17258983 - 17258877
Alignment:
Q  150 aaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacata 249  Q
    |||||||||| |||||||  |||  ||||| | |||||||||||||||||  |||  || ||| ||||||||||| ||| ||||||| |||||||||||     
T  17258983 aaaataaagtcaaactat--tttcgtacaatcaataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatg 17258886  T
Q  250 tcaaaagct 258  Q
    ||| |||||    
T  17258885 tcataagct 17258877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 34160731 - 34160796
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||| ||||||| || ||| ||||||||||||||||||| ||| |||||||  |||||||||    
T  34160731 tataagctattttcattagatatcttggagaacttatgaaaataagctgaaaacagtttatgaaca 34160796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 39594809 - 39594866
Alignment:
Q  184 taagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    ||||||||||||||||| ||| |||  |||||||||||||| ||| ||||||||||||    
T  39594809 taagctgttttcataagatatcttgttgaacttatgaaaataagctgaaaacaactta 39594866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 40848769 - 40848810
Alignment:
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  40848769 ttggagaacttatgaaaataaggcgaaaacaacttatgaaca 40848810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 1636838 - 1636771
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatat 250  Q
    ||||||||||||||||||||||| ||||| ||||||||   || ||| ||||||||| |||||||||||    
T  1636838 tataagctgttttcataagttatcttggaaaacttatg-ctataagctgaaaacaacgtatgaacatat 1636771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 7096273 - 7096213
Alignment:
Q  105 taatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaac 164  Q
    |||||||| ||||||||||| ||||| |||||||| ||||||| |||||||||||| ||||    
T  7096273 taatcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaac 7096213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 29115376 - 29115304
Alignment:
Q  88 gcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    |||||||  ||||||| | |||||| ||||||||||| ||||| ||||||||||||||||  |||||||||||    
T  29115376 gcttatagcataaacatttatcataaaagtgcttatgtataagctatttctacaacaaaaggtaaaataaagt 29115304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 36796845 - 36796712
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaac-aaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgga 210  Q
    |||||||| |||| ||||||||||||| |||| ||||||||||||| || ||| ||  |||| | | || |||||||||||||||||  | ||| |||||    
T  36796845 ataagtgcatatgtataagttatttctgcaacaaaaaataaaataaggttaaatta--ttttcacataagctataagctgttttcatttgctatattgga 36796748  T
Q  211 gaacttatgaaaatgagccgaaaacaacttatgaac 246  Q
     ||||||  ||||| | | ||||||| |||||||||    
T  36796747 aaacttacaaaaataaactgaaaacagcttatgaac 36796712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 37526283 - 37526203
Alignment:
Q  168 gtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||| ||| || ||||||| |||||||||||||| || |||||| |||||| |||| ||| ||||||| ||||| |||||    
T  37526283 gttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacat 37526203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 912793 - 912663
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaaca-aaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||||||| | |||||||||||||||||||| |||| || |||||||||||| ||| | |||||| ||| || | ||||| |||||| ||||  |||     
T  912793 atcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaaaat-tgttttcatataagcaataagttgtttttataaactatc 912695  T
Q  206 ttggagaacttat-gaaaatgagccgaaaaca 236  Q
    ||||| | ||||| |||||| ||| |||||||    
T  912694 ttggaaagcttatggaaaataagctgaaaaca 912663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 6587178 - 6587099
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||| |||||||||||| |||  |||||||||| ||||||| ||| | ||||| ||||||||| | ||| |||||||    
T  6587178 ctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacctgtcataagctgt 6587099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 7319391 - 7319466
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    |||||| ||| || |||||| |||||||| |||| ||| ||||||||||||| ||||| ||| |||| ||||||||    
T  7319391 tgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaagcaacttat 7319466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 108 - 248
Target Start/End: Original strand, 16863708 - 16863846
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattt 206  Q
    |||||||||||||||||  |||| ||||| || ||||||| || ||||||| | ||    || ||| ||||||  |||||||||||||||| ||||||      
T  16863708 tcatataagtgcttatgcgtaagctatttttataacaaaagattaaataaactcaac---tggtttcatacaagttataagctgttttcatcagttatca 16863804  T
Q  207 tggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||  ||||| ||||||| ||| |||||||||||| ||||||    
T  16863805 tggttaacttgtgaaaataagctgaaaacaacttaagaacat 16863846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 16889671 - 16889795
Alignment:
Q  117 tgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaact 215  Q
    |||||||| ||||| |||||| | ||||||| ||||| | |||| |||||  ||||||||| || |||||||||||||||||||| |||  | ||||  |    
T  16889671 tgcttatgtataagctatttccataacaaaagataaacttaagtcaaact--gtttttatagaagctataagctgttttcataagctatgctagagagtt 16889768  T
Q  216 tatgaaaatgagccgaaaacaacttat 242  Q
    |||| |||| | | |||||||||||||    
T  16889769 tatggaaataatctgaaaacaacttat 16889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 28776992 - 28777035
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||    
T  28776992 ctataagctgttttcataagctatcttggagaactaatgaaaat 28777035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 35135804 - 35135745
Alignment:
Q  109 catataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactat 167  Q
    |||||||||| ||||| ||||| |||||||| ||||||| |||||||||||| |||||||    
T  35135804 catataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactat 35135745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 12460075 - 12460005
Alignment:
Q  178 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||| ||| |||| ||| ||| ||| ||| ||||||||||| |||| |||||||| |||||||||    
T  12460075 aaactataagttgtcttcacaagctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacat 12460005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 260
Target Start/End: Original strand, 14295457 - 14295584
Alignment:
Q  132 tatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccg 230  Q
    |||||||| ||||||| |||||||||||| |||||  ||||| ||| || ||||||||||||||| |||| |||  |||||| ||| |  || | ||| |    
T  14295457 tatttctataacaaaagataaaataaagtcaaact--gttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctg 14295554  T
Q  231 aaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||| |||||  |||||||| |||||||    
T  14295555 aaaacagcttatcgacatatcataagctgt 14295584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 18543296 - 18543192
Alignment:
Q  151 aaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatat 250  Q
    ||||||||| ||||| |||||||||| ||  |||||| |||||||||||| |||  |||||| |||||| |||| ||| |||||||||| ||| |||| |    
T  18543296 aaataaagtcaaact-tgtttttatataagatataagttgttttcataagctatcctggagagcttatg-aaataagctgaaaacaactcatggacatgt 18543199  T
Q  251 caaaagc 257  Q
    || ||||    
T  18543198 cataagc 18543192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 42582912 - 42582978
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||||||  |||| ||| ||||||||||||||||||| |||  ||||||  ||||||||||    
T  42582912 tataagctgtttttgtaagctatattggagaacttatgaaaataagctcaaaacagtttatgaacat 42582978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 8177577 - 8177524
Alignment:
Q  207 tggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||| ||||||||||| | | |||||||||||||| |||||||| |||||||    
T  8177577 tggagagcttatgaaaataacctgaaaacaacttatggacatatcataagctgt 8177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 12521542 - 12521603
Alignment:
Q  196 ataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagc 257  Q
    ||||| ||||||| ||| |||||| |||| ||| ||||||| ||||||||||||||| ||||    
T  12521542 ataagctattttgaagagcttatggaaataagctgaaaacagcttatgaacatatcataagc 12521603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 19177405 - 19177499
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaaca-aaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagtt 202  Q
    |||||||||||||||||| ||||  ||||||||||||| || ||||||| ||||  |||  |||||| ||| || ||||||| ||||||| ||||||    
T  19177405 atcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaac--tgttttcatataagctataagttgttttcgtaagtt 19177499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 20982279 - 20982226
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaa-aataaaataaagt 159  Q
    |||||||||||||||||| ||||| |||||||| ||||||  ||||||||||||    
T  20982279 atcatataagtgcttatgtataagctatttctataacaaaggataaaataaagt 20982226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 29588787 - 29588856
Alignment:
Q  88 gcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataa 156  Q
    |||||||  |||||||||  | ||||||||||||||| ||||| |||||||| ||||||| |||||||||    
T  29588787 gcttatagcataaacactttttatataagtgcttatgtataagctatttctataacaaaatataaaataa 29588856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 36639506 - 36639583
Alignment:
Q  166 atgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    ||||||| ||||||  ||||  ||||||||||||| ||| ||| ||| ||||||||||| ||  ||||||||||||||    
T  36639506 atgttttcatacaagttatagactgttttcataagctatcttgaagagcttatgaaaataagaggaaaacaacttatg 36639583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 37690721 - 37690640
Alignment:
Q  168 gtttttatacaaactataagctgttttcat-aagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||| ||| || ||||||| ||||||||| |||||||| |||||| |||||| |||| ||| ||||||| ||||| |||||    
T  37690721 gttttcatataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaacagcttattaacat 37690640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 1899168 - 1899232
Alignment:
Q  196 ataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||||||  ||||||| ||||| |||| ||| |||||||||||||| |||| ||| |||||||    
T  1899168 ataagttatactggagaatttatggaaataagctgaaaacaacttatgcacatgtcataagctgt 1899232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 10272502 - 10272442
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    ||||||| ||||||||||||  || |||||||  |||||||||| ||| ||||||||||||    
T  10272502 ctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaactta 10272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 10391269 - 10391329
Alignment:
Q  97 ataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataa 156  Q
    ||||||||| |||||||||||||||| | ||||| ||||| || ||||||| |||||||||    
T  10391269 ataaacacttatcatataagtgcttacgtataagctatttttataacaaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 33533610 - 33533546
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||||| ||| ||| ||||||| |||||| |||| ||  ||||||||||||||||    
T  33533610 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 33533546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 36318887 - 36318927
Alignment:
Q  282 ttatgccagtagataagctcaaataagatcatccaaacatg 322  Q
    ||||||||||||||||||| ||||||||  |||||||||||    
T  36318887 ttatgccagtagataagctaaaataagacaatccaaacatg 36318927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 37063217 - 37063157
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactat 167  Q
    |||||||| |||||||| ||||  |||||||| ||||||| |||||||||||| |||||||    
T  37063217 tcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaactat 37063157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 37489451 - 37489411
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    ||||||||| || ||||||||||||||| ||||||||||||    
T  37489451 atcatataactgtttatgaataagttatctctacaacaaaa 37489411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 40048419 - 40048371
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    ||||||||||||| ||||||| |||||| ||||||| ||||||||||||    
T  40048419 ataagtgcttatgtataagttgtttctataacaaaagataaaataaagt 40048371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 258
Target Start/End: Complemental strand, 10199533 - 10199402
Alignment:
Q  126 ataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||||||| |||  || |||||||||||| ||||||| ||  ||||  | | ||||||| |||||||||| |||||| |||| |||||||||||    
T  10199533 ataagttatttctataacccaagataaaataaagtcaaactattttcgtata--atcgataagcttttttcataagctattttagagagcttatgaaaat 10199436  T
Q  225 gagccgaaaacaacttatgaacatatcaaaagct 258  Q
     ||| ||||||||||||||||||| ||| |||||    
T  10199435 aagctgaaaacaacttatgaacatgtcataagct 10199402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 34290235 - 34290312
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagct 258  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||| ||| |||||||||||||||| || ||| |||||    
T  34290235 ctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataagct 34290312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 35179139 - 35179200
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| ||||||    
T  35179139 tataagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatg 35179200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 7137069 - 7137005
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||| ||||| ||||||||||    
T  7137069 ctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaa 7137005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 33527286 - 33527178
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgga 210  Q
    ||||| ||||||||||||| |||||||| ||||||| |||||||| ||| |||||  ||||| ||| || ||||||||||||||||||||||||  | ||    
T  33527286 ataagcgcttatgaataagctatttctaaaacaaaagataaaatacagtcaaact--gttttcatataatctataagctgttttcataagttatcctcga 33527189  T
Q  211 gaacttatgaa 221  Q
    || ||||||||    
T  33527188 gatcttatgaa 33527178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 252
Target Start/End: Complemental strand, 41638459 - 41638308
Alignment:
Q  102 cactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataag 200  Q
    |||| |||||||||||||||||| |||| |||||| || |||| || |||||||||||| | ||||  |||| ||| ||| |||||||| |||||| |||    
T  41638459 cacttatcatataagtgcttatgtataatttatttatagaacacaagataaaataaagtcatactaaattttcatataaagtataagctattttcaaaag 41638360  T
Q  201 ttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatca 252  Q
     ||| || | || |||||| || |||||| |||||||||| ||| |||||||    
T  41638359 ctatctttgtgagcttatggaagtgagccaaaaacaacttttgagcatatca 41638308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 252
Target Start/End: Original strand, 52286604 - 52286748
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||||||||| |||| |  |||| ||| || |||||| || ||||||||||| ||     
T  52286604 atcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaa--ttttcatataagctataaactattttcataagtcatc 52286701  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacatatca 252  Q
    ||| |||  ||||| |||| |||  |||| | |||||| ||||||||    
T  52286702 ttgaagagtttatggaaataagctaaaaatagcttatggacatatca 52286748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 14630037 - 14629966
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatca 252  Q
    ||||||||| |||||||||| ||| |||||||  ||||| |||| ||| |||||||||||||||||||||||    
T  14630037 ctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacatatca 14629966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 49125750 - 49125801
Alignment:
Q  97 ataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaa 148  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  49125750 ataaacgcttatcatataagttcttatgaataagttatttctacaacaaaaa 49125801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 6292493 - 6292571
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||||| ||||| |||  ||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||| |||||||    
T  6292493 tataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgt 6292571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 31517859 - 31517744
Alignment:
Q  132 tatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccg 230  Q
    |||||||||||||||| |||||||||||| ||| |  | ||| ||| || ||||||||||| |||||||  | | ||||||| ||||||||||| ||| |    
T  31517859 tatttctacaacaaaagataaaataaagttaaatt--gatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctg 31517762  T
Q  231 aaaacaacttatgaacat 248  Q
    |||||| |||||||||||    
T  31517761 aaaacagcttatgaacat 31517744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 6102152 - 6102233
Alignment:
Q  180 actataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaac-atatcaaaagctgt 260  Q
    ||||||||||||||||||||| ||| | |||||| ||||| |||| ||| |||||||| |||||||| |||||| |||||||    
T  6102152 actataagctgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgt 6102233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 14128654 - 14128577
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaa 145  Q
    |||||||||||||| |  ||||||||| |||||| ||| |||||||||||||||||   ||||||||||||| |||||    
T  14128654 gataaacaacttaaataaatgcttatagtataaagacttatcatataagtgcttatatgtaagttatttctaaaacaa 14128577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 2777891 - 2777955
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||  ||||||||    
T  2777891 ctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaa 2777955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 30259649 - 30259540
Alignment:
Q  89 cttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataag 187  Q
    ||||||| ||| ||||| |||||| ||||||||||| | ||| |||||||| ||||||| |||||||||||| ||||  || ||| ||| || |||||||    
T  30259649 cttataacatacacacttatcatagaagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaac--tgctttgatataagctataag 30259552  T
Q  188 ctgttttcataa 199  Q
    |||||| |||||    
T  30259551 ctgtttgcataa 30259540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 38867895 - 38867831
Alignment:
Q  188 ctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatca 252  Q
    ||||||||||||||||| ||| ||||||||||||||| |||  ||||||||| ||| ||||||||    
T  38867895 ctgttttcataagttatcttgaagaacttatgaaaataagctaaaaacaactgatggacatatca 38867831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 45107549 - 45107609
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactat 167  Q
    |||||||||||||||||  ||||| |||||||| || |||||||||||||||| |||||||    
T  45107549 atcatataagtgcttatctataagctatttctataagaaaaataaaataaagtcaaactat 45107609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 45975693 - 45975753
Alignment:
Q  185 aagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||||||||| ||| |||||||| |||||||||| ||| ||||||| ||||||||    
T  45975693 aagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 45975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 49557028 - 49557120
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    |||||||| |||||||   |||||||||  ||| |||| ||||||||||||||  || |||||||||||||| ||||||| ||||||||||||    
T  49557028 gataaacagcttaattaagtgcttataacgtaatcacttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagt 49557120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 4576792 - 4576871
Alignment:
Q  169 tttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||| |||||  ||||||||||||||||||| ||| ||| | ||||||||||||| ||| ||| ||||||||| |||||    
T  4576792 tttttgtacaagttataagctgttttcataagctatattgaataacttatgaaaataagctgaacacaacttataaacat 4576871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 5887064 - 5886989
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagc 257  Q
    ||||||||||||  |||||  || |||||||||||| |||||| ||| ||||||||||||||||||| ||| ||||    
T  5887064 tataagctgtttctataagccatcttggagaacttacgaaaataagctgaaaacaacttatgaacatgtcataagc 5886989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 17269177 - 17269285
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaaaat-aaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattt 206  Q
    ||||||||||||||||| |||||||||||||| ||||||| | |||||||||| |||   |||||| ||| || | ||||| |||||||||||| |||      
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaa--ttgttttcatataagcaataagttgttttcataagctatcc 17269274  T
Q  207 tggagaactta 217  Q
    |||||| ||||    
T  17269275 tggagagctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 4548689 - 4548780
Alignment:
Q  148 ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    |||||||||||| |||||  ||||||||||||   |||||||||||||||||| ||| ||||||| |||  |||||| |||  |||||||||||    
T  4548689 ataaaataaagtcaaact--gtttttatacaagtcataagctgttttcataagctatcttggagagcttcagaaaataagctaaaaacaactta 4548780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 26779996 - 26779934
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    ||||||| |||||||||||| ||| ||| ||||||||||||||| ||  ||||||||||||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaacaacttatg 26779934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 27140478 - 27140556
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||||||||| ||||| |||  |||||| |||||| |||| ||| |||||||||||||| |||| ||| |||||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgt 27140556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 145
Target Start/End: Complemental strand, 47885152 - 47885114
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaa 145  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  47885152 atcatataattgcttatgaataagttatttctacaacaa 47885114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 260
Target Start/End: Complemental strand, 1565620 - 1565527
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||| || ||| | |||||||||||| |||  ||||||||||| || |||||||| ||| ||||||| |||||| |||| ||| |||||||    
T  1565620 tgtttttgtataaagtgtaagctgttttcttaatctattttggagagctcatgaaaataagctgaaaacagcttatgcacatgtcataagctgt 1565527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 3063442 - 3063361
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||| ||| |||| |||||||||||||| ||||||||||||||| | |||  |||| || ||||||||| ||||| ||||    
T  3063442 tgttttcatataaaccataagctgttttcacaagttattttggagagcgtatataaataaggcgaaaacaaattatgcacat 3063361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 7472296 - 7472365
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaaca 236  Q
    ||||||| || || ||||||||||||| |||||| ||| ||||||| ||||||||||| ||| |||||||    
T  7472296 tgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 12564562 - 12564509
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    |||||||||||| ||| |||||||||||||| |||| ||| |||||||||||||    
T  12564562 tgttttcataagctatcttggagaacttatggaaataagctgaaaacaacttat 12564509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 16980738 - 16980787
Alignment:
Q  93 taatataaacactaatcatataagtgcttatgaataagttatttctacaa 142  Q
    ||||||||| ||| |||||||||||||||||| |||||| ||||||||||    
T  16980738 taatataaatacttatcatataagtgcttatgtataagtcatttctacaa 16980787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 28077133 - 28077068
Alignment:
Q  188 ctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaa 253  Q
    ||||||||||||| |||||| |||| |||||  |||| ||| ||||||||||||||||||| ||||    
T  28077133 ctgttttcataagctattttagagagcttattgaaataagctgaaaacaacttatgaacatttcaa 28077068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 38503511 - 38503470
Alignment:
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  38503511 ttggagaacttatgaaaataagctgaaaacaacttatgaaca 38503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 3234086 - 3234022
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||| ||||| ||| ||||||||||||||||||| ||  ||||| ||||||||||    
T  3234086 ctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaa 3234022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 32113657 - 32113717
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    |||||| ||||||||||||||||| |||||||  |||||||||| ||| ||||||| ||||    
T  32113657 ctataaactgttttcataagttatgttggagattttatgaaaataagctgaaaacagctta 32113717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 37593744 - 37593688
Alignment:
Q  192 tttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||||| ||||||| ||| ||||||||||| ||| ||||||| |||||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacat 37593688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 42174854 - 42174918
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||| ||   |||||| ||||||||    
T  42174854 ctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaa 42174918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 4699749 - 4699686
Alignment:
Q  114 aagtgcttatgaataagttatttctacaaca-aaaataaaataaagtaaaactatgtttttata 176  Q
    ||||||||||||||||| ||||||||||||| || || ||||||||| ||||||| ||| ||||    
T  4699749 aagtgcttatgaataagctatttctacaacacaagattaaataaagtcaaactatttttgtata 4699686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 10744300 - 10744367
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||||||||||||| | | || |||||||||| ||||| ||  ||||||| |||||||||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacat 10744367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 16982080 - 16981940
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||||||||| ||||| |||| ||||||| | ||||||| ||||||||||||  ||   |||||||| | ||||| |||| |||| ||||||| |||     
T  16982080 atcatataagtgtttatgtataacttatttcgataacaaaagataaaataaagtggaa--ttgtttttacaaaaactttaagatgttatcataagctatc 16981983  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
     |||||| |||||  |||| |||  ||||||||||||| ||||    
T  16981982 atggagagcttatataaataagctaaaaacaacttatggacat 16981940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 25479580 - 25479647
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||| |||||||||||| |||  | |||| ||||||||||| ||| |||||||||| ||||||||    
T  25479580 ctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacat 25479647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 28689538 - 28689444
Alignment:
Q  168 gtttttatacaaactataagctgttttcata--agttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||| ||| || ||||||| ||||||||||  || ||| ||||| | ||||||||||| ||| |||||||||||||| |||| ||| |||||||    
T  28689538 gttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgt 28689444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 29007840 - 29007716
Alignment:
Q  127 taagttatttctacaacaaaaataaaat-aaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatg 225  Q
    ||||||||||||| |||||||  ||||| ||||| |||||||  ||| ||| || ||||||| |||||||||  | || |||| | | |||||  ||||     
T  29007840 taagttatttctataacaaaagaaaaattaaagtcaaactat--tttcatataagctataagttgttttcatcggctactttgaaaagcttatcgaaata 29007743  T
Q  226 agccgaaaacaacttatgaacatatca 252  Q
    ||| |||||||||||||||||||||||    
T  29007742 agctgaaaacaacttatgaacatatca 29007716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 37842426 - 37842359
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||| |||||||||||| ||| ||| ||||||||| ||||| ||| ||||||  |||||||||||    
T  37842426 ctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacat 37842359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 38116146 - 38116083
Alignment:
Q  184 taagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||| ||||||| |||||||| ||||||||||||||||| | ||| | |||||||||| |||||    
T  38116146 taagttgttttcttaagttatcttggagaacttatgaaagtaagctggaaacaacttaggaaca 38116083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 49173290 - 49173389
Alignment:
Q  66 tagataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaa-aaataaaataaagtaaaac 164  Q
    |||||||||||||||||| | ||||||||  |||| ||||  |||||||||||||| |  ||||| | ||||| ||| || |||||||||||||| ||||    
T  49173290 tagataaacaacttaattatgtgcttatagcataagcacttctcatataagtgcttgtctataagctgtttctgcaataacaaataaaataaagttaaac 49173389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 11639486 - 11639408
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||| |||||| ||||||||||| | |||| ||||||||||| |||  |||||| |||||| |||| ||| |||||||    
T  11639486 tataaactgtttgcataagttattctagagagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgt 11639408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 14443449 - 14443527
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||| |||||| ||||| ||  |||||||| |||||||||| ||  |||||||||||| |||||| | |||||||||    
T  14443449 tataaggtgtttttataagctacattggagaatttatgaaaataaggtgaaaacaacttacgaacatgttaaaagctgt 14443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 15361065 - 15361107
Alignment:
Q  207 tggagaacttatgaaaatgagccgaaaacaacttatgaacata 249  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||    
T  15361065 tggagagcttatgaaaataagctgaaaacaacttatgaacata 15361107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 308
Target Start/End: Original strand, 15515665 - 15515695
Alignment:
Q  278 gtgtttatgccagtagataagctcaaataag 308  Q
    |||||||||||||||||||||||||||||||    
T  15515665 gtgtttatgccagtagataagctcaaataag 15515695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 15558217 - 15558279
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatga 244  Q
    ||||||||||||||||||| |||  | ||||||||||  |||| ||| |||||||||||||||    
T  15558217 tataagctgttttcataagatatcctagagaacttatagaaataagctgaaaacaacttatga 15558279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 46252739 - 46252673
Alignment:
Q  195 cataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgta 261  Q
    |||||| ||| ||||||| ||||||||||| | | ||||||||||||||||||| ||| ||| ||||    
T  46252739 cataagctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagttgta 46252673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 51695558 - 51695500
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||| ||| |||||||| |||||||||| ||| ||||| | ||||||||||    
T  51695558 tgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 51695500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 51929845 - 51929783
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatga 244  Q
    ||||||||||||||||||| |||| | |||| |||||| |||| |||||||| || |||||||    
T  51929845 tataagctgttttcataagctattctagagagcttatggaaataagccgaaatcagcttatga 51929783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 52013996 - 52014038
Alignment:
Q  278 gtgtttatgccagtagataagctcaaataagatcatccaaaca 320  Q
    |||||||||||| |||||||||||||||||| | |||||||||    
T  52013996 gtgtttatgccaatagataagctcaaataagttaatccaaaca 52014038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 15784329 - 15784394
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||||| ||| ||||| ||| ||||||||||| ||||||| |||  |||||||||| ||||||    
T  15784329 tataagctggttttataagctatcttggagaacttgtgaaaataagctaaaaacaacttgtgaaca 15784394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 16322849 - 16322910
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    ||||||||||||||||| | ||||||| ||| |||||| |||| |||  |||||||||||||    
T  16322849 tataagctgttttcataggctattttgaagagcttatggaaataagctaaaaacaacttatg 16322910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 30371133 - 30371214
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||| ||| || ||||||| ||||||||||||  |||||||||| | |||  |||| ||| |||||||||||||| ||||    
T  30371133 tgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaacttatggacat 30371214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 49888774 - 49888819
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    |||||||||||| ||| || |||||||||||||||| |||||||||    
T  49888774 tgttttcataagctatcttagagaacttatgaaaataagccgaaaa 49888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 473163 - 473227
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||| ||||||| | ||||||||||||||||||| ||  ||||| | ||||||||    
T  473163 ctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatgaa 473227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 1865151 - 1865115
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttat 218  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  1865151 tataagctgatttcataagttatttttgagaacttat 1865115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 4202273 - 4202233
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    |||||||||||||||| | |||||||||||||| |||||||    
T  4202273 atcatataagtgcttaagtataagttatttctataacaaaa 4202233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 17577845 - 17577773
Alignment:
Q  175 tacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||| ||||||||||||||  |||||||| ||| ||||||||  ||||| |||  |||||| ||||||||||    
T  17577845 tacaagctataagctgtttttgtaagttatcttgaagaacttacaaaaataagcttaaaacagcttatgaaca 17577773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 24146442 - 24146363
Alignment:
Q  68 gataaacaacttaatttta-tgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    ||||||||||||||||| | ||||||||| || | |||  |||||  ||||||||||| |||||||||||||| |||||||    
T  24146442 gataaacaacttaatttaagtgcttataa-attagcacatatcatgcaagtgcttatgtataagttatttctataacaaaa 24146363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 24915122 - 24915058
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||||||||||||| | | ||||||||||| ||||||| ||  ||||| | ||||||||    
T  24915122 ctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaa 24915058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 27963438 - 27963362
Alignment:
Q  184 taagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||| |||||||||||| |||| |||||| |||||  |||| |||  ||||||||||||| |||| ||| |||||||    
T  27963438 taagttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgt 27963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 44936773 - 44936673
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaacta 166  Q
    ||||||||||||||||  ||||||||| ||||| | || |||| | || | |||| | | |||||||||||| ||||||| |||| ||||||| ||||||    
T  44936773 gataaacaacttaattaaatgcttatagtataagcgctcatcaaaaaattacttaagtagaagttatttctataacaaaagataagataaagtcaaacta 44936674  T
Q  167 t 167  Q
    |    
T  44936673 t 44936673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 49517015 - 49517088
Alignment:
Q  126 ataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataag 200  Q
    |||||||||||||| ||||||| |||||||||||| ||| |  ||||| ||  || ||||||||||||||||||||    
T  49517015 ataagttatttctataacaaaagataaaataaagtcaaatt--gttttcatttaagctataagctgttttcataag 49517088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 49692181 - 49692046
Alignment:
Q  120 ttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttat 218  Q
    ||||| |||||||||||||| || |||  |||||||||||| | ||||| ||| ||||  | |||| ||| |||||||||||||||  |||||||| |||    
T  49692181 ttatgtataagttatttctataataaaggataaaataaagtcagactatatttatata--agctatgagccgttttcataagttatcctggagaac-tat 49692085  T
Q  219 gaaaatgagccgaaaacaacttatgaacatatcaaaagct 258  Q
    |||||| ||| ||||||||  |||| |||| ||| |||||    
T  49692084 gaaaat-agctgaaaacaaactatggacatgtcataagct 49692046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 8017440 - 8017512
Alignment:
Q  188 ctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||||||||| ||| |||||||||||||||||||  || |||||||| |||||||||||||| |||||||    
T  8017440 ctgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataagctgt 8017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 42621446 - 42621386
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||||||    
T  42621446 ctataagctgttttcataagttattctggagaacttgtgaaaataagctgaaaacaactta 42621386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 29316846 - 29316767
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||||||||||||| || ||| |||||||||||||| |||| ||| ||||| ||||||||||||| ||| |||||||    
T  29316846 ctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgt 29316767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 3102619 - 3102728
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    ||||||||| |||||||| ||||| ||||| || | ||||| |||||||||||| |||||||  ||||||| || |||| |||||||||||||| ||||     
T  3102619 atcatataactgcttatgtataagctatttttatagcaaaatataaaataaagtcaaactat--ttttatataatctattagctgttttcataatttatc 3102716  T
Q  206 ttggagaactta 217  Q
     |||||||||||    
T  3102717 atggagaactta 3102728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 28677714 - 28677651
Alignment:
Q  197 taagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||||||||||||| |||||| |||| |||||||||||||||||||| || ||| |||||||    
T  28677714 taagttattttggagagcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgt 28677651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 1625900 - 1625966
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||| |||||||||||| ||| |||||||||||| |||||| ||| ||||||| |||||||||||    
T  1625900 tataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacat 1625966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 10143103 - 10143190
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataag 200  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||| |||| ||||  |||||||||| || ||||||| | ||||||||||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaac--tgtttttatataagctataagtttttttcataag 10143190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 16398115 - 16398173
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    ||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||| ||||    
T  16398115 ataagctattttcataagttatgttggagaacttatgaaaataagctgaaaacagctta 16398173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 35379079 - 35379021
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||| ||| ||||||| ||||||||||| ||| ||||||||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaaca 35379021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 39621890 - 39621973
Alignment:
Q  118 gcttatgaataagttatttctacaaca-aaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttat 204  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    |||| || || ||||||||||||||||||||||||    
T  39621890 gcttatgaataagatatttctataacacaaaataaaataaagtcaaact----ttttgtataatctataagctgttttcataagttat 39621973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 234
Target Start/End: Original strand, 11513809 - 11513950
Alignment:
Q  89 cttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataag 187  Q
    ||||||| |||| |||| |||||||||| | ||||| ||||||||||   ||||||||| |||||||||||| ||| |  ||||| ||| || |||||||    
T  11513809 cttataacataagcacttatcatataagggtttatgtataagttatt---acaacaaaagataaaataaagtcaaatt--gttttcatataagctataag 11513903  T
Q  188 ctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
     |||||||||||| |||  |||||||||| || |||| ||| |||||    
T  11513904 ttgttttcataagctatcatggagaacttttggaaataagctgaaaa 11513950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 40158719 - 40158796
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||| ||||||||||||||||| |||||| |||||| || | ||| ||||||||||||| ||||| ||| |||||||    
T  40158719 ataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgt 40158796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 44438941 - 44438831
Alignment:
Q  148 ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||| |||||  |||||| ||||| | ||||||||| ||||||||||||  |||||| ||| || |||| ||| |||||||  |||||||||    
T  44438941 ataaaataaagtcaaact--gtttttgtacaagccataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaaca 44438844  T
Q  248 tatcaaaagctgt 260  Q
    | ||| |||||||    
T  44438843 tgtcataagctgt 44438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 9395115 - 9395195
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||| ||| || ||||||||||||||||| ||||||| || ||| ||||||||||| ||| ||||||| ||||| ||||    
T  9395115 tgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaacagcttataaaca 9395195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 40279268 - 40279332
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||| |||||||||||| ||| ||||||||||||||||||| ||| |||||||  |||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 40279338 - 40279402
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||| |||||||||||| ||| ||||||||||||||||||| ||| |||||||  |||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 2416245 - 2416353
Alignment:
Q  113 taagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggag 211  Q
    |||||||||||| |||||||||||||  | ||||| ||||||| |||| ||| |  ||||| ||| || |||||||||||||| ||||||||| |  |||    
T  2416245 taagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaatt--gttttgatataagctataagctgtttttataagttatataagag 2416342  T
Q  212 aacttatgaaa 222  Q
    |||||||||||    
T  2416343 aacttatgaaa 2416353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 38078473 - 38078414
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||||| ||| ||||||| |||||| ||||||||  ||||||||||||||||||    
T  38078473 tgttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatgaacat 38078414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 4026748 - 4026883
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgga 210  Q
    ||||||||||||  ||||| ||||| || | ||||| |||||||||||| ||| ||| |||  |||  || |||||||||||||||||| ||||  || |    
T  4026748 ataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttttgcata--aattataagctgttttcataaattatcctgaa 4026845  T
Q  211 gaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||||||| ||| ||||||  |||| ||||||    
T  4026846 gaacttatgaaaataagctgaaaactgcttaggaacat 4026883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 5133708 - 5133823
Alignment:
Q  117 tgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaact 215  Q
    |||||||| ||||| |||||||| ||||||| |||||||||||  |||||  ||||||||| ||  ||||||||||||||| ||||||| |  |||| ||    
T  5133708 tgcttatgtataagctatttctataacaaaagataaaataaagataaact--gtttttatataagatataagctgttttcaaaagttatctaagagagct 5133805  T
Q  216 tatgaaaatgagccgaaa 233  Q
    |||| |||| ||| ||||    
T  5133806 tatggaaataagctgaaa 5133823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 6227737 - 6227811
Alignment:
Q  168 gtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    ||||||||| ||||||||||  ||||||||||| ||||||||||| ||||||  ||  ||| |||||||||||||    
T  6227737 gtttttatataaactataagtggttttcataagctattttggagagcttatggtaacaagctgaaaacaacttat 6227811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 7871644 - 7871722
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgta 261  Q
    |||||||||||||||||| | ||||| ||| |||||| |||| ||| ||||||| ||||||| ||||||| ||| ||||    
T  7871644 ataagctgttttcataagctcttttgaagagcttatggaaataagctgaaaacaccttatgatcatatcataaggtgta 7871722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 6718609 - 6718537
Alignment:
Q  176 acaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacata 249  Q
    |||||||||| |||||||| ||||| ||| ||||| ||||||||||||| ||| ||||||| ||||||| ||||    
T  6718609 acaaactatatgctgtttttataagatatcttgga-aacttatgaaaataagctgaaaacagcttatgaccata 6718537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 7928345 - 7928304
Alignment:
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  7928345 ttggagaacttatgaaaataagctgaaaacaacttatgaaca 7928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 13869166 - 13869105
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    ||||||||||||||||||||||||  ||||||||| |||||||| |   |||||||||||||    
T  13869166 ctataagctgttttcataagttatcctggagaactaatgaaaataatttgaaaacaacttat 13869105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 18066113 - 18066170
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||| ||| || |||||||||||||||||||| ||| |||||||||||| ||||||    
T  18066113 tgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaat 18066170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 26143714 - 26143645
Alignment:
Q  178 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||| ||||||||||||||||| ||  ||||||||||||||||||| ||| ||||| ||| | ||||||    
T  26143714 aaactgtaagctgttttcataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaaca 26143645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 33931655 - 33931574
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||| || || |||||||||||||||||||| |||||||||||| |  || |||| ||| ||||  |||||||||||||    
T  33931655 tgtttttgtataagctataagctgttttcataagctattttggagaaatagtggaaataagctgaaataaacttatgaacat 33931574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 40279197 - 40279262
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||| |||||||||||| ||| ||||||||||||||||||| ||| ||||| |  |||||||||    
T  40279197 tataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaaca 40279262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 40682464 - 40682400
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||| ||||||||||| ||| ||| ||||||||||||||| ||  ||||||||||||||||||    
T  40682464 tataagcagttttcataagatatcttg-agaacttatgaaaataagttgaaaacaacttatgaaca 40682400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 2400042 - 2400126
Alignment:
Q  67 agataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaataa 151  Q
    ||||||||| |||||||  ||| ||||   ||||||| | |||||||||||||||||| ||||||| |||||| |||||| ||||    
T  2400042 agataaacaccttaattaaatgtttatggcataaacaattatcatataagtgcttatgtataagttgtttctataacaaagataa 2400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 3673734 - 3673786
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    ||||||||||||||||| || ||||||||||| ||||||| ||||||||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaatataaaataaagt 3673786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 17952850 - 17952753
Alignment:
Q  102 cactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataag 200  Q
    |||| |||||||||| ||||||  ||||| |||||||| ||||||| |||||||||||| ||||||  |||| ||| || ||| ||| ||||||||||||    
T  17952850 cacttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaacta--ttttcatataagctacaagatgttttcataag 17952753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 33197422 - 33197330
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    ||||||||||| ||||  |  ||||||| |||||| || |||||||||||||||||  ||||| |||||||| ||||||| ||| ||||||||    
T  33197422 gataaacaactaaattaaacacttataacataaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagt 33197330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 1893352 - 1893285
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||||||||  ||| ||| ||||||||||| ||||||| ||| ||||| |||||||| ||||    
T  1893352 ctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaataacttatgtacat 1893285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 6167354 - 6167311
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||    
T  6167354 ctataagctgtttttataagctattttggagaacttatggaaat 6167311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 9174813 - 9174880
Alignment:
Q  180 actataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||||||||||||||||| ||| ||  ||| ||||||||||| ||| ||||| | ||||||||||    
T  9174813 actataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaaca 9174880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 15977992 - 15978047
Alignment:
Q  189 tgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatga 244  Q
    |||||||||||| |||||||||||  |||||||||| ||| |||||||| ||||||    
T  15977992 tgttttcataagctattttggagagattatgaaaataagctgaaaacaatttatga 15978047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 28803650 - 28803591
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaact 165  Q
    |||||||||||||||||  |||||||||||| | ||||||| |||||||||||| |||||    
T  28803650 atcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaact 28803591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 33319897 - 33319830
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    ||||||| || | ||||||| ||||||||||||  ||| ||||||||||||||||||| ||| |||||    
T  33319897 tgtttttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaa 33319830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 36415744 - 36415677
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||||||||||||| |||  || |||||||| |||||| ||  |||||||||||||| ||||    
T  36415744 ctataagctgttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatgcacat 36415677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 1493598 - 1493520
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||| ||| || ||||| ||||||||||||||| ||  ||   ||||||||||||| ||| ||||||||||||||||    
T  1493598 tgttttcatataagctatatgctgttttcataagtcatcctgactaacttatgaaaataagctgaaaacaacttatgaa 1493520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 10567057 - 10567135
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||| |||||| |||||  |||| |||||| ||| ||||||| ||| ||||||||||||||| ||| ||| |||||||    
T  10567057 tataaactgtttccataaactattctggagagcttgtgaaaattagctgaaaacaacttatgatcatgtcataagctgt 10567135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 21616701 - 21616655
Alignment:
Q  178 aaactataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||| ||||||| ||||||| || |||||||||||||||||||||||    
T  21616701 aaacaataagctattttcattagctattttggagaacttatgaaaat 21616655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 26626876 - 26626938
Alignment:
Q  185 aagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||||||| ||| ||| ||||||||||||||| | | |||||||  |||||||||    
T  26626876 aagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaaca 26626938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 35485880 - 35485987
Alignment:
Q  143 caaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    |||| |||||||||||| ||||||| |  |||||  | ||||||| |||||| ||||| |||  || ||| | |||| |||||||| ||||||| |||||    
T  35485880 caaagataaaataaagtcaaactatttcattata--agctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttat 35485977  T
Q  243 gaacatatca 252  Q
    ||||||||||    
T  35485978 gaacatatca 35485987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 35809859 - 35809909
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaataaaataaa 157  Q
    |||||||||||||||||| |||||||||||| |  ||||| ||||||||||    
T  35809859 atcatataagtgcttatgtataagttatttccatgacaaagataaaataaa 35809909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 42409373 - 42409331
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||| |||||||||||||||||| |||||| |||||||||||    
T  42409373 tataaactgttttcataagttattctggagagcttatgaaaat 42409331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 12464544 - 12464491
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    ||||||||| |||||||||| ||| ||||||||||| ||||||| ||| |||||    
T  12464544 ctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 16451118 - 16451183
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||||| |||| ||| ||||||||||  ||||||| ||| ||||||| || |||||||    
T  16451118 tataagctgttttcgtaagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaaca 16451183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 22681270 - 22681189
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||| ||| || |||||||||||||||||||  |||  | ||||||||||| |||| |||  |||||| |||||||||||    
T  22681270 tgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacat 22681189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 33256708 - 33256818
Alignment:
Q  148 ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||| |||||  ||||| ||| ||||||||||| |||||||||||  ||  || ||| | ||||||||| ||| || ||||  |||||||||    
T  33256708 ataaaataaagtcaaact--gttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaaca 33256805  T
Q  248 tatcaaaagctgt 260  Q
    | ||| |||||||    
T  33256806 tgtcataagctgt 33256818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 40279408 - 40279449
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||| |||||||||||| ||| |||||||||||||||||||    
T  40279408 ataagttgttttcataagctatattggagaacttatgaaaat 40279449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 44443330 - 44443387
Alignment:
Q  191 ttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||| ||| || |||| | ||||||||| ||| |||||||||||||||||||    
T  44443330 ttttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacat 44443387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 2964770 - 2964726
Alignment:
Q  278 gtgtttatgccagtagataagctcaaataagatcatccaaacatg 322  Q
    ||||||||||| ||||||||| ||||||||| | |||||||||||    
T  2964770 gtgtttatgccggtagataagttcaaataagttaatccaaacatg 2964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 163
Target Start/End: Complemental strand, 5867378 - 5867278
Alignment:
Q  64 tttagataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaata-aaataaagtaaa 162  Q
    |||||||||||||  ||||||  || |||||  || |||||| |||||||||||  |||||  |||| |||||||| |||||||| | ||||||||||||    
T  5867378 tttagataaacaaggtaatttagtgtttatagcatcaacacttatcatataagtatttatgtctaagctatttctaaaacaaaaaaagaaataaagtaaa 5867279  T
Q  163 a 163  Q
    |    
T  5867278 a 5867278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 11344425 - 11344340
Alignment:
Q  110 atataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttca 196  Q
    ||||||||||||||| ||||| |||||||| ||||||| |||||| ||||| |||   |||||| |||||| ||||||  ||||||||    
T  11344425 atataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaa--ttgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 16867738 - 16867802
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||||| ||| ||| ||||||| |||||| |||| ||  ||||||||||||||||    
T  16867738 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 16867802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 23974562 - 23974510
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    |||||||| ||||| |||| ||| || ||||||||||||||||||||| ||||    
T  23974562 tataagcttttttcttaagctatatttgagaacttatgaaaatgagccaaaaa 23974510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 26202027 - 26202091
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||| ||||| ||| ||||||||||||||||||| ||  ||||| | ||||||||    
T  26202027 ctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaa 26202091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 28039417 - 28039337
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||| ||| |||||||||||  |||||||||| | | ||||| || ||||| |||| ||| ||||||| ||||||||||    
T  28039417 tgttttcatataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatgaaca 28039337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 37053515 - 37053579
Alignment:
Q  102 cactaatcatataagtgcttatgaataagttatttctacaaca-aaaataaaataaagtaaaact 165  Q
    |||| |||||||||||||||||| |||   |||||||| |||| ||||||||||||||| |||||    
T  37053515 cacttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaact 37053579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 42457952 - 42458008
Alignment:
Q  186 agctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    |||||| |||||||| ||| || |||||| ||||||||| ||| |||||||||||||    
T  42457952 agctgtattcataagctatcttagagaacatatgaaaataagctgaaaacaacttat 42458008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 43199346 - 43199431
Alignment:
Q  113 taagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataa 199  Q
    |||| |||| || |||||||||||||||||||||| |||||||||||| ||| ||| ||  |||  || ||||||| |||||||||||    
T  43199346 taagcgcttctgtataagttatttctacaacaaaagataaaataaagttaaattatcttcgtat--aagctataagttgttttcataa 43199431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 36783474 - 36783338
Alignment:
Q  112 ataagtgcttatgaataa-gttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgg 209  Q
    ||||||| ||||| |||| | |||||||| | ||||| |||||||||||||||| |  ||||| ||| ||||||| ||||||||||||||| ||| ||||    
T  36783474 ataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaatt--gttttcatataaactattagctgttttcataagctatattgg 36783377  T
Q  210 agaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    || | ||||||| || ||| ||||||| |||||||||||    
T  36783376 agcaattatgaatataagctgaaaacagcttatgaacat 36783338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 39602280 - 39602202
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||||||||||||||| ||| || |||||||||||||||| ||  |||||||| |||||||||| ||| |||||||    
T  39602280 tataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgt 39602202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 260
Target Start/End: Complemental strand, 20192744 - 20192598
Alignment:
Q  113 taagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggag 211  Q
    |||||||||||| ||||| ||||| || ||||||| |||||||||||| ||||   ||||| ||| || ||||||||||||||  ||| |||||  ||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaaca--gttttcatataatctataagctgtttttgtaacttattcgggag 20192647  T
Q  212 aacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    | |||||| |||||||  ||||||| |||||| |||| ||| |||||||    
T  20192646 agcttatggaaatgagttgaaaacagcttatggacatgtcataagctgt 20192598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 34924681 - 34924547
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattt 206  Q
    |||||||||||| | ||  ||||| ||||||||||| |||||||||| ||| | |||| |   ||||||| ||||||| |||| |||||||||| ||| |    
T  34924681 atcatataagtgttcatttataagctatttctacaaaaaaaataaaacaaaatcaaacgac--ttttataaaaactatgagctattttcataagctatct 34924584  T
Q  207 tggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    | |||| ||||||||||| ||| ||||||||| ||||    
T  34924583 tagagagcttatgaaaataagctgaaaacaacatatg 34924547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 52440733 - 52440656
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagct 258  Q
    ||||||||| ||||||||| |||| ||| ||||||||||||||| ||  ||||||||||||||||||| ||| |||||    
T  52440733 ctataagctattttcataatttatcttgaagaacttatgaaaattagttgaaaacaacttatgaacatgtcataagct 52440656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 2719467 - 2719529
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||| ||| || |||||||||||    
T  2719467 ctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 2719529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 3016012 - 3015934
Alignment:
Q  87 tgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaact 165  Q
    ||||||||| ||||||||| || ||||||||||||||| || | ||||||||| |||||| ||||||| |||| |||||    
T  3016012 tgcttataacataaacacttattatataagtgcttatgtattaattatttctataacaaagataaaatgaagtcaaact 3015934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 20669172 - 20669238
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||||||||||||||| ||| ||||||| |||||| |||| ||| ||||||| |||||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacat 20669238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 33405252 - 33405166
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaa-atgagccgaaaacaacttatgaacatatca 252  Q
    |||||| ||| || |||||||||||||||||||| ||| ||| |||||||||||||  | |||||||||||  ||||||||||||||    
T  33405252 tgttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaagttaagccgaaaacagtttatgaacatatca 33405166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 36887504 - 36887578
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaag 256  Q
    |||||| ||||||||||||  || ||| ||||||||||||||| ||| ||||||| ||||||||||| |||||||    
T  36887504 tataagttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgtcaaaag 36887578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 40665429 - 40665495
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||| |||||||||||||||| ||||||| ||||| ||||| ||| ||||||| |||||||||||    
T  40665429 tataagatgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacat 40665495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 21367667 - 21367732
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||| |||||||||||| ||| ||||||||||||||||||| ||| ||||||| ||| ||||||    
T  21367667 tataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaaca 21367732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 33883823 - 33883754
Alignment:
Q  179 aactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||| | ||||| |||||| ||| || |||||||||||||||| ||| |||||||||||||||||||    
T  33883823 aactatatgttgtttacataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacat 33883754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 54775054 - 54775194
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||| ||||||||| |  ||||||||||||| ||||||| |||||||||||| |||| || ||| ||||   | |||||||||||||| ||||||||     
T  54775054 atcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatata---attataagctgttttcgtaagttatc 54775150  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacata 249  Q
     ||||||  |||||||||| ||  |||| || |||||| |||||    
T  54775151 atggagagtttatgaaaataagatgaaagcagcttatggacata 54775194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 38462197 - 38462342
Alignment:
Q  97 ataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttc 195  Q
    ||||||||| |||||||||||| ||||  ||||| |||||||| | ||||| |||||||||||| ||||  |||||| ||| |  |||||| ||||||||    
T  38462197 ataaacacttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaac--tgttttcatatatgctataaactgttttc 38462294  T
Q  196 ataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    ||||| |||    || | |||||| |||| ||| ||||||||||||||    
T  38462295 ataagctatccaagatagcttatggaaataagctgaaaacaacttatg 38462342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 3845627 - 3845580
Alignment:
Q  187 gctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  3845627 gctgttttcataagttatcttggagaacttatgaaaataagctgaaaa 3845580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 41633361 - 41633420
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttat 242  Q
    ||||||||||||||| || ||||||||||| ||||||||||| ||| |||||||| ||||    
T  41633361 ataagctgttttcatcagctattttggagagcttatgaaaataagctgaaaacaatttat 41633420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 50600249 - 50600194
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaaca 236  Q
    ||||||||||||||||| || ||| ||||||||||||||||||| ||| |||||||    
T  50600249 ctataagctgttttcatcagctatattggagaacttatgaaaataagctgaaaaca 50600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 1217870 - 1217792
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||||||||||||||| |||  | |||||||||||||| | ||  |||||||||||||| |||| ||| |||||||    
T  1217870 tataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgt 1217792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 24158645 - 24158531
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaa--aataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    ||||||||||||||||| |||||||||||||| ||||||  |||||| |||||| ||||    | |||||| ||   |||||||||||||||||| |||     
T  24158645 tcatataagtgcttatgtataagttatttctataacaaatgaataaagtaaagtgaaac----tgtttatataagtaataagctgttttcataagctatc 24158550  T
Q  206 ttggagaacttatgaaaat 224  Q
     |||||| |||||| ||||    
T  24158549 ctggagagcttatggaaat 24158531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 34610889 - 34610811
Alignment:
Q  169 tttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||| |||||  |||||| || ||||||||| ||| |||| |||||||||||||| ||| |||||| |||||||||||    
T  34610889 tttttgtacaagttataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaaca 34610811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 39971227 - 39971297
Alignment:
Q  89 cttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaag 158  Q
    ||||||| || |||||| |||||||||||||||||| |||||||| || || ||||||| |||||||||||    
T  39971227 cttataacatcaacacttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaag 39971297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 26320176 - 26320107
Alignment:
Q  178 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    |||||||||||| |||||||||| | | ||| |||||||| |||||| | | ||||||||||||||||||    
T  26320176 aaactataagcttttttcataagctctcttgaagaacttacgaaaataaactgaaaacaacttatgaaca 26320107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 30574051 - 30573918
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggag 211  Q
    ||||| ||||||| ||||| |||||||| || ||| |||||||||||| ||  | | ||||||||  | ||||| | |||||||||||| ||| ||||||    
T  30574051 ataagcgcttatgtataagctatttctataa-aaagataaaataaagttaagttttttttttata--atctatatgatgttttcataagctatcttggag 30573955  T
Q  212 aacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    | || ||||| || ||| ||||||| |||||||||||    
T  30573954 agctgatgaacataagctgaaaacagcttatgaacat 30573918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 37273135 - 37273200
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||| ||||||||||||| ||| |||||||||||||| |||| ||  |||||||||||||| ||||    
T  37273135 ataaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacat 37273200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 14548805 - 14548737
Alignment:
Q  168 gtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaaca 236  Q
    ||||| ||| || ||||||| ||||||||||||||||| |||||| |||||| |||| ||| |||||||    
T  14548805 gttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaaca 14548737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 20174042 - 20173982
Alignment:
Q  97 ataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataa 156  Q
    |||||||||| | ||||||||||||||| || ||||||||||| ||||||| |||||||||    
T  20174042 ataaacactagttatataagtgcttatgtattagttatttctataacaaaagataaaataa 20173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 23785191 - 23785316
Alignment:
Q  117 tgcttatgaataagttatttctacaaca-aaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaact 215  Q
    |||||||| |||||||||||||||| || || |||||||||||| ||||  ||| || ||| || |||||| ||||||||| ||| | |  |||||| ||    
T  23785191 tgcttatgcataagttatttctacagcagaagataaaataaagtcaaac--tgtattcatataagctataaactgttttcacaagctctcatggagagct 23785288  T
Q  216 tatgaaaatgagccgaaaacaacttatg 243  Q
    |||| |||  ||| ||||||||||||||    
T  23785289 tatggaaacaagctgaaaacaacttatg 23785316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 28622070 - 28622006
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||||||||||||||||  ||| || |||||||||||||||| | | ||||||| ||||||||    
T  28622070 ctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 44747479 - 44747427
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaa 233  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||| ||| ||||    
T  44747479 ctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaa 44747427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 4526439 - 4526396
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||    
T  4526439 ctataagttgtttttataagttattttgaagaacttatgaaaat 4526396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 16790232 - 16790181
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaa 157  Q
    |||||||||||||||||  |||||||||||||| ||||||| ||||||||||    
T  16790232 atcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 22203429 - 22203472
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||    
T  22203429 ctataagttgttttcataagctatcttggagaacttatgaaaat 22203472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 32582747 - 32582786
Alignment:
Q  185 aagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  32582747 aagctgttttcataagctattttggagaacttatggaaat 32582786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 46886763 - 46886720
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||    
T  46886763 ctataagctgttttcataagctatcttggagaacttttgaaaat 46886720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 24684779 - 24684741
Alignment:
Q  282 ttatgccagtagataagctcaaataagatcatccaaaca 320  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  24684779 ttatgccagtagataagctcaaataagttaatccaaaca 24684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 32064358 - 32064456
Alignment:
Q  99 aaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcat 197  Q
    ||||||| ||||||| |||||| ||| ||||||| |||||| ||||||| |||||||||||| ||| ||  |||||||| |||||||| | ||| |||||    
T  32064358 aaacacttatcatattagtgctaatgtataagttctttctaaaacaaaaaataaaataaagtcaaatta--tttttata-aaactatatgttgtgttcat 32064454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 47249532 - 47249490
Alignment:
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||| |||||||||||| |||| ||||||||||||||||||    
T  47249532 ttggaggacttatgaaaataagccaaaaacaacttatgaacat 47249490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 18405902 - 18405861
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaa 222  Q
    ||||||| |||||||||||| ||| |||||||||||||||||    
T  18405902 ctataagttgttttcataagctatcttggagaacttatgaaa 18405861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 23816053 - 23816086
Alignment:
Q  185 aagctgttttcataagttattttggagaacttat 218  Q
    |||||||||||||||| |||||||||||||||||    
T  23816053 aagctgttttcataagctattttggagaacttat 23816086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 27792798 - 27792859
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactat 167  Q
    |||||||||||||||||| ||||| |||||| | ||||||| ||||||||| || |||||||    
T  27792798 atcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactat 27792859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 27795985 - 27795944
Alignment:
Q  267 cagtttcagatgtgtttatgccagtagataagctcaaataag 308  Q
    |||||||| | ||| |||||||||||||||||||||||||||    
T  27795985 cagtttcacaagtgcttatgccagtagataagctcaaataag 27795944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 30321990 - 30321937
Alignment:
Q  267 cagtttcagatgtgtttatgccagtagataagctcaaataagatcatccaaaca 320  Q
    |||||||| | ||||||||| ||||| ||||||||||| ||| |||||||||||    
T  30321990 cagtttcataggtgtttatgtcagtaaataagctcaaagaagttcatccaaaca 30321937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 30443892 - 30443945
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    |||||||||||||| ||||  ||| ||||||||||||||||||| ||| |||||    
T  30443892 ctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaa 30443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 34254911 - 34254827
Alignment:
Q  148 ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaa 233  Q
    |||||||||||| ||||| | ||||||||  | |||||| || |||||||||| |||| ||||||||||||| |||| ||| ||||    
T  34254911 ataaaataaagtcaaactgt-tttttatattagctataaactattttcataagctattctggagaacttatgtaaataagctgaaa 34254827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 41028995 - 41028942
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagt 159  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||||    
T  41028995 atcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagt 41028942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 45541580 - 45541649
Alignment:
Q  191 ttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||||||| ||| ||||| ||||||||| ||| | | ||||||| ||||||||||| ||| |||||||    
T  45541580 ttttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgt 45541649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 2128326 - 2128262
Alignment:
Q  184 taagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||||||||||||  || ||  ||||| ||||||||| ||| ||||||| |||||||||||    
T  2128326 taagctgttttcataagccatcttttagaacgtatgaaaataagctgaaaacagcttatgaacat 2128262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 12985414 - 12985354
Alignment:
Q  183 ataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatg 243  Q
    |||| ||||||||||||| |||  |  |||||||||| |||| ||||||||||||||||||    
T  12985414 ataaactgttttcataagctatcctcaagaacttatggaaataagccgaaaacaacttatg 12985354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 20880589 - 20880633
Alignment:
Q  282 ttatgccagtagataagctcaaataagatcatccaaacatgtcca 326  Q
    |||||| ||||||||||||||||||||   |||||||||||||||    
T  20880589 ttatgcaagtagataagctcaaataagccaatccaaacatgtcca 20880633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 25185919 - 25185959
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    |||||||||||||||||||||||| ||||| || |||||||    
T  25185919 atcatataagtgcttatgaataagatatttatataacaaaa 25185959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 25776116 - 25776180
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||||||||||| | ||| |||||||||| || | ||| ||||||| ||||||||    
T  25776116 ctataagttgttttcataagttgtcttgaagaacttatggaagtaagctgaaaacagcttatgaa 25776180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 28283721 - 28283681
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    |||||||||||||||||| |||||||| ||||| |||||||    
T  28283721 atcatataagtgcttatgcataagttacttctataacaaaa 28283681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 39980728 - 39980792
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    ||||||| |||||| ||||| ||| ||||||||||||||||||| ||  ||||| | ||||||||    
T  39980728 ctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaa 39980792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 307
Target Start/End: Complemental strand, 41028832 - 41028804
Alignment:
Q  279 tgtttatgccagtagataagctcaaataa 307  Q
    |||||||||||||||||||||||||||||    
T  41028832 tgtttatgccagtagataagctcaaataa 41028804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 47319345 - 47319273
Alignment:
Q  178 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatat 250  Q
    ||||||||||||||| ||||||  ||| || |||| ||||||||||| ||  |||| |||||||| |||||||    
T  47319345 aaactataagctgttgtcataatctatcttagagagcttatgaaaataagtagaaatcaacttattaacatat 47319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 51278318 - 51278242
Alignment:
Q  90 ttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaact 165  Q
    ||||||||||| || | ||||||||| |||| ||| ||||| |||||||| ||||||| || ||||||||| |||||    
T  51278318 ttataatataagcatttatcatataattgctaatgtataagctatttctataacaaaatattaaataaagtcaaact 51278242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 54180844 - 54180772
Alignment:
Q  188 ctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    ||||||||||||| |||| |||||| |||||  |||| |||  ||||||||||||| |||| ||| |||||||    
T  54180844 ctgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgt 54180772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 27463 - 27593
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaaca-aaaataaaataaagtaaaacta 166  Q
    |||||||||||||| |  | |||||||  |||| | || ||||| |||||||||||| |||||||||||||| |||| || |||||||||||| |||       
T  27463 gataaacaacttaaataaacgcttatagcataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaa--t 27560  T
Q  167 tgtttttatacaaactataagctgttttcataa 199  Q
    |||||| ||| |||||||||| |||||||||||    
T  27561 tgttttcatataaactataagttgttttcataa 27593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 21355 - 21313
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||    
T  21355 tataagctgttttcataagctatattggagaaattatgaaaat 21313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 2735014 - 2735132
Alignment:
Q  126 ataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||| ||| |||| ||||||| |||||||||||| ||| ||| ||| ||||  | ||||||||||||||||||||  || ||| | |||||||||||||    
T  2735014 ataagctatgtctataacaaaagataaaataaagttaaattatttttgtata--atctataagctgttttcataagcaatcttgaacaacttatgaaaat 2735111  T
Q  225 gagccgaaaacaacttatgaa 245  Q
     ||||||||||| ||||||||    
T  2735112 aagccgaaaacagcttatgaa 2735132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 112 - 251
Target Start/End: Original strand, 4006645 - 4006783
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaa-aataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgga 210  Q
    ||||||||||||| ||||| |||||||| ||||||  |||||||||||| |||   |||||||||| || ||||||| |||||||||||| |||    ||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaa--ttgtttttatataagctataagttgttttcataagctatccctga 4006742  T
Q  211 gaacttatgaaaatgagccgaaaacaacttatgaacatatc 251  Q
    ||  |||||||||| ||| ||||| |||||||| |||||||    
T  4006743 gaggttatgaaaataagctgaaaataacttatggacatatc 4006783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 258
Target Start/End: Original strand, 6647315 - 6647463
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattt 206  Q
    ||||||| |||||||||| |||||||||||||| |||||||| | |||||||| ||| ||   ||| ||| |   ||||| ||||||||||||| ||| |    
T  6647315 atcatatgagtgcttatgtataagttatttctataacaaaaa-ataataaagtcaaattac--tttaatataggttataatctgttttcataagctatct 6647411  T
Q  207 tggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagct 258  Q
    | |||| ||||||||||| ||  ||||||| ||||||||||| ||| |||||    
T  6647412 tagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataagct 6647463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 24982704 - 24982743
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatga 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24982704 ctataagctgttttcataagttattttggagaacttatga 24982743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 31624089 - 31624168
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagctgt 260  Q
    |||||||||||||||||| | ||| |||||||| |||||||||| ||  ||||||| ||||||||||| ||| |||||||    
T  31624089 ctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgt 31624168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 32513752 - 32513811
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactat 167  Q
    |||||| |||| ||||| |||||||||||||| ||||||||||||||||||| |||||||    
T  32513752 tcatattagtgtttatgcataagttatttctataacaaaaataaaataaagtcaaactat 32513811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 5328900 - 5329040
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||| ||||||||| |  ||||||||||||| ||||||| |||||||||||| |||| || ||| ||||   | |||||||||||||| ||||||||     
T  5328900 atcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatata---attataagctgttttcgtaagttatc 5328996  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacata 249  Q
     ||||||  |||||||||| ||  |||| || |||||| |||||    
T  5328997 atggagagtttatgaaaataagatgaaagcagcttatggacata 5329040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 258
Target Start/End: Original strand, 27893977 - 27894122
Alignment:
Q  111 tataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgg 209  Q
    |||||| | ||||| ||||| ||||||||||||| || |||||||||||| ||| |  ||||| ||| ||||||| || |||||||||||| ||| |||     
T  27893977 tataagggtttatgtataagctatttctacaacagaatataaaataaagtcaaatt--gttttaatataaactattag-tgttttcataagatatcttga 27894073  T
Q  210 agaacttatgaaaatgagccgaaaacaacttatgaacatatcaaaagct 258  Q
    | | ||||||||||| ||| |||||||  ||||| |||||||| |||||    
T  27894074 aaagcttatgaaaataagctgaaaacagtttatggacatatcataagct 27894122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 835320 - 835265
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaaca 236  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||| ||| |||||||    
T  835320 ctataagcagttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 29274373 - 29274245
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||| || |||||||| ||||| |||||||| | ||||| |||||||||||| ||| |  ||||| ||| || |||||| ||||||||||||| ||||    
T  29274373 atcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaatt--gttttcatataagctataaactgttttcataagatatt 29274276  T
Q  206 ttggagaacttatgaaaatgagccgaaaaca 236  Q
     ||| || ||||||  ||||||| |||||||    
T  29274275 gtggcgagcttatggtaatgagcagaaaaca 29274245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 9093695 - 9093572
Alignment:
Q  112 ataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgga 210  Q
    ||||| ||||||| ||||| |||||||| | ||||| |||||||||||| ||| |  |||||  || || |||||||||||||||||||| | | || ||    
T  9093695 ataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaatt--gttttcgtataagctataagctgttttcataagctgtcttaga 9093598  T
Q  211 gaacttatgaaaatgagccgaaaaca 236  Q
    ||||||| |||||| ||| |||||||    
T  9093597 gaacttaagaaaataagctgaaaaca 9093572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 9109322 - 9109256
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||||||||||||| |  || |||||||||| ||||||||| ||  ||||||||||||||||||    
T  9109322 ctataagctgttttcattaactaatttggagaacctatgaaaataaggtgaaaacaacttatgaaca 9109256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 248
Target Start/End: Original strand, 8010283 - 8010423
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattt 206  Q
    |||||||||||||||| | ||||| |||||||| ||||| ||||||||||||| || |||  |||   |  ||  ||||||||||||| |||||||||      
T  8010283 atcatataagtgcttaggtataagctatttctataacaacaataaaataaagtcaatcta-ctttcattttaagttataagctgttttaataagttatcc 8010381  T
Q  207 tggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    ||||||||||||  |||| | | ||||| | |||||||||||    
T  8010382 tggagaacttatagaaataaactgaaaatagcttatgaacat 8010423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 20861784 - 20861727
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    |||||||||| || |||||||||||||||  |||||||| || |||||||||||||||    
T  20861784 tgtttttatataagctataagctgttttcccaagttattgtgtagaacttatgaaaat 20861727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 147
Target Start/End: Original strand, 31461567 - 31461644
Alignment:
Q  70 taaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    ||||||||||||||   |||||||| ||||| |||| ||  |||||||||||||| ||||| |||||||| |||||||    
T  31461567 taaacaacttaattaagtgcttatattataagcacttattgtataagtgcttatgtataagctatttctataacaaaa 31461644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 32386243 - 32386110
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||||||||||||||| ||||| ||||||    | |||| ||||||||||||||||||  |||||||||       |||||||||||||| ||||||     
T  32386243 atcatataagtgcttatgtataagctatttcacttagaaaagataaaataaagtaaaact--gtttttata-------taagctgttttcattagttatc 32386153  T
Q  206 ttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
     |||| | ||||||||| | ||| |||||||||||||| ||||    
T  32386152 ctggaaagcttatgaaagtaagctgaaaacaacttatggacat 32386110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 836612 - 836556
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaa 237  Q
    |||| |||||| |||||||| ||| |||| |||||||||||||||||| ||||||||    
T  836612 ctattagctgtgttcataagctatcttggggaacttatgaaaatgagctgaaaacaa 836556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 4246393 - 4246476
Alignment:
Q  165 tatgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 248  Q
    |||||||| ||| || |||||||||||||||||||| |||| |||||| | ||| ||||| ||  ||||||| |||||| ||||    
T  4246393 tatgttttcatataatctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacat 4246476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 6654544 - 6654652
Alignment:
Q  110 atataagtgcttatgaataagttatttctacaacaaa-aataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttg 208  Q
    ||||||| ||||||| |||||||||||||| |||||| |||||||| |||| |||   ||||||| |  ||||| ||||||||||| ||| | ||| |||    
T  6654544 atataagggcttatgtataagttatttctataacaaataataaaattaagtcaaa--ttgtttttgtttaaactttaagctgttttaatatgctatcttg 6654641  T
Q  209 gagaacttatg 219  Q
    |||| ||||||    
T  6654642 gagagcttatg 6654652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 8201232 - 8201275
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||    
T  8201232 ctataagttgtttttataagttatgttggagaacttatgaaaat 8201275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 8420341 - 8420225
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaa-aataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttatt 205  Q
    |||||||||||||||||| | |||||||||||  || |||  |||||||||||| ||||  ||| |||||| ||| ||||||||||| || |||| |||     
T  8420341 atcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaac--tgtgtttatataaaatataagctgttctcgtaagctata 8420244  T
Q  206 ttggagaacttatgaaaat 224  Q
     |||||| |||||| ||||    
T  8420243 atggagagcttatggaaat 8420225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 9604821 - 9604877
Alignment:
Q  152 aataaagtaaaactatgtttttatacaaactataagctgttttcataagttattttgga 210  Q
    |||||||||||| ||| ||| ||||  | ||||||||||||||||||||||||||||||    
T  9604821 aataaagtaaaattatttttgtata--agctataagctgttttcataagttattttgga 9604877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 10016472 - 10016576
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactatgtttttatacaaactataagctgttttcataagttattt 206  Q
    |||||||||| |||||| ||||| |||||||| | ||||| |||||||||| | |||||  ||| | ||| || | |||||||||||||||||| ||| |    
T  10016472 tcatataagtccttatgtataagctatttctaaaccaaaagataaaataaatttaaact--gttctcatataagccataagctgttttcataagctatgt 10016569  T
Q  207 tggagaa 213  Q
    |||||||    
T  10016570 tggagaa 10016576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 14340986 - 14340931
Alignment:
Q  68 gataaacaacttaattttatgcttataatataaacactaatcatataagtgcttat 123  Q
    ||||||||||||||||   ||||||||| ||||||||| |||||||||||| ||||    
T  14340986 gataaacaacttaattaagtgcttataacataaacacttatcatataagtgtttat 14340931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 14492287 - 14492365
Alignment:
Q  167 tgtttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaa 245  Q
    |||||| |||||| ||||||||||||||||||||||||  | ||||  || || |||| ||| |||||||| |||||||    
T  14492287 tgttttgatacaagctataagctgttttcataagttatcctagagagtttgtggaaatcagctgaaaacaatttatgaa 14492365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 32975905 - 32975963
Alignment:
Q  108 tcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaact 165  Q
    ||||||||||| ||||| |||||||||||||  ||||||| |||||||||||| |||||    
T  32975905 tcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaact 32975963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 33787815 - 33787773
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaat 224  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||    
T  33787815 tataagctgttttcataagttatcttggagagcttatggaaat 33787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 34430531 - 34430469
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatga 244  Q
    |||||| |||||||||||| ||| |||||||| |||||||||| ||| ||||| | |||||||    
T  34430531 tataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatga 34430469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 34910480 - 34910414
Alignment:
Q  181 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||| |||| ||||||  | ||||||||||||||||||| | ||| |||||||||| |||||||    
T  34910480 ctataagttgttctcataatctgttttggagaacttatgaaagtaagcggaaaacaactcatgaaca 34910414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 2455259 - 2455324
Alignment:
Q  182 tataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaaca 247  Q
    ||||||||||||||||| |  || |||||||| || ||||||| ||| ||||||||||||| ||||    
T  2455259 tataagctgttttcatatgcaatcttggagaagttgtgaaaataagctgaaaacaacttataaaca 2455324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 26564949 - 26564892
Alignment:
Q  102 cactaatcatataagtgcttatgaataagttatttctacaacaaaaataaaataaagt 159  Q
    |||| |||||||||||||||||  |||||  ||||||| |||||||| ||||||||||    
T  26564949 cacttatcatataagtgcttatccataagccatttctataacaaaaacaaaataaagt 26564892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 2034575 - 2034523
Alignment:
Q  114 aagtgcttatgaataagttatttctacaacaaaaataaaataaagtaaaacta 166  Q
    ||||||||||| ||||| | ||| ||||||||| |||||||||||| ||||||    
T  2034575 aagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaacta 2034523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 2514628 - 2514688
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaacta 166  Q
    ||||| |||||||||||| ||||| |||||||| || |||| |||||||||||| ||||||    
T  2514628 atcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaacta 2514688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 4163266 - 4163306
Alignment:
Q  282 ttatgccagtagataagctcaaataagatcatccaaacatg 322  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  4163266 ttatgccagtagataagctcaaataagccaatccaaacatg 4163306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 4224887 - 4224927
Alignment:
Q  282 ttatgccagtagataagctcaaataagatcatccaaacatg 322  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  4224887 ttatgccagtagataagctcaaataagccaatccaaacatg 4224927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 10616624 - 10616552
Alignment:
Q  169 tttttatacaaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaactta 241  Q
    |||| ||| ||| ||||||| ||||| ||||| ||||||||||| ||||| ||||| ||| ||| ||||||||    
T  10616624 ttttcatataaaatataagccgttttaataagctattttggagagcttataaaaataagctgaacacaactta 10616552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 13907739 - 13907811
Alignment:
Q  64 tttagataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttattt 136  Q
    |||||||||||| ||||||||   ||||||| | ||| | ||||||||| || |||||||||||| |||||||    
T  13907739 tttagataaacagcttaatttgcagcttatagtttaagctctaatcataaaaatgcttatgaataggttattt 13907811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 20861655 - 20861615
Alignment:
Q  282 ttatgccagtagataagctcaaataagatcatccaaacatg 322  Q
    |||||||||||| |||||||||||||||  |||||||||||    
T  20861655 ttatgccagtaggtaagctcaaataagacaatccaaacatg 20861615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 27727237 - 27727189
Alignment:
Q  88 gcttataatataaacactaatcatataagtgcttatgaataagttattt 136  Q
    ||||||| |||||||||| |||||||||||||||||  | |||||||||    
T  27727237 gcttatagtataaacacttatcatataagtgcttatatacaagttattt 27727189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 31668829 - 31668789
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa 147  Q
    |||||||||||||||||| ||||| |||||||| |||||||    
T  31668829 atcatataagtgcttatgtataagctatttctataacaaaa 31668789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 1218 - 1157
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactat 167  Q
    |||||||||||||||||| ||||| |||||||| ||||||| |||||||||||| |||||||    
T  1218 atcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactat 1157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 2757 - 2818
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaaactat 167  Q
    |||||||||||||||||| ||||| |||||||| ||||||| |||||||||||| |||||||    
T  2757 atcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactat 2818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 42501 - 42599
Alignment:
Q  65 ttagataaacaacttaattttatgcttataatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaa-ataaaataaagtaaa 162  Q
    |||||||||||||||||||  |  ||||||  | | ||| | |||||||||||||||||| |||||| ||||||| ||||||| |||||||| ||||||    
T  42501 ttagataaacaacttaattaaacacttatagcagacacatttatcatataagtgcttatgtataagtcatttctataacaaaagataaaatagagtaaa 42599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 6795 - 6740
Alignment:
Q  93 taatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaa 148  Q
    |||||||| |||| |||||||||||||||||| ||||  |||||||| ||||||||    
T  6795 taatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaa 6740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 116714 - 116659
Alignment:
Q  93 taatataaacactaatcatataagtgcttatgaataagttatttctacaacaaaaa 148  Q
    |||||||| |||| |||||||||||||||||| ||||  |||||||| ||||||||    
T  116714 taatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaa 116659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 22229 - 22283
Alignment:
Q  180 actataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaa 234  Q
    ||||||||||||| ||||||| ||| ||||| ||||||||||||| ||| |||||    
T  22229 actataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaa 22283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 9919 - 9878
Alignment:
Q  107 atcatataagtgcttatgaataagttatttctacaacaaaaa 148  Q
    |||||||| ||||||||| |||||||||||||| ||||||||    
T  9919 atcatataggtgcttatgtataagttatttctataacaaaaa 9878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 17263 - 17312
Alignment:
Q  169 tttttatacaaactataagctgttttcataagttattttggagaacttat 218  Q
    |||| |||||| ||||||| |||||||||||| ||| |||||||||||||    
T  17263 ttttaatacaatctataagttgttttcataagctatcttggagaacttat 17312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 5816 - 5768
Alignment:
Q  88 gcttataatataaacactaatcatataagtgcttatgaataagttattt 136  Q
    ||||||| |||||||||| |||||||||||||||||  | |||||||||    
T  5816 gcttatagtataaacacttatcatataagtgcttatatacaagttattt 5768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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