View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11436_high_42 (Length: 301)
Name: NF11436_high_42
Description: NF11436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11436_high_42 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 48397505 - 48397738
Alignment:
| Q |
1 |
atgctaccatcaccaggcatgggacatcttataccaatgattgaatttgccaaaagaattattattcttaatcaaaatcttcaaatctccttcttcattc |
100 |
Q |
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| T |
48397505 |
atgctaccatcaccaggcatgggacatcttataccaatgattgaatttgccaaaagaattattattcttaatcaaaatcttcaaatcaccttcttcattc |
48397604 |
T |
|
| Q |
101 |
ccaccgaaggtccaccttcaaaagctcaaaaaacagttcttcaatctctaccaaagtccatttcacatactttccttccaccagtttccttctcagacct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
48397605 |
ccaccgaaggtccaccttcaaaagctcaaaaaacagttcttcaatctctaccaaagttcatttcacatactttccttccaccagtttccttctcagacct |
48397704 |
T |
|
| Q |
201 |
tccaccaaactccgggatagagacaatcatctcc |
234 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |
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| T |
48397705 |
tccaccaaactccgggatagagacaatcatctcc |
48397738 |
T |
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