View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11438_low_25 (Length: 249)
Name: NF11438_low_25
Description: NF11438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11438_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 18577585 - 18577362
Alignment:
| Q |
19 |
gtatatgctaggattttatgatatattgtaacattacgtttccatgctccaagagaaagcactgggtttcatgaaaagatgattcctcatgttcttctgc |
118 |
Q |
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| T |
18577585 |
gtatatactaggattttatgatatattataacattacgtttccatgctccaagagaaagcactgggttccatgaaaagatgattcctcatgttcttctgc |
18577486 |
T |
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| Q |
119 |
agacactatctcaacacattcatctttgtgccaaaatctccaatgcatgatatggcatgcttttgagctgatgaaaacaaccacattaaaatcaaaatct |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18577485 |
agacactatctcaacacattcatctttgtgccaaaatctccaatgcatgatatggcatgcttttgagctgatgaaaacaaccacattaaaatcaaaatct |
18577386 |
T |
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| Q |
219 |
tttatgagaaaaatattcatctct |
242 |
Q |
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|||||||||||||||||||||||| |
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| T |
18577385 |
tttatgagaaaaatattcatctct |
18577362 |
T |
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