View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11441_high_9 (Length: 219)
Name: NF11441_high_9
Description: NF11441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11441_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 7559182 - 7559385
Alignment:
| Q |
1 |
caatagcaggtgggttaatctcaactcctgttataggttggtctctctacacactcaaaacaactggttgtggtcttccaccaggaccaggtggatcaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7559182 |
caatagcaggtgggttaatctcaactcctgttataggttggtctctctacacactcaaaacaactggttgtggtcttccaccaggaccaggtggatcaat |
7559281 |
T |
|
| Q |
101 |
tggtgcattagaaggtgtaagttatcttgttgttgtgggcattgttgcttggtctatatatactaaaacaaaaactggttctggtcttcctaatggtcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7559282 |
tggtgcattagaaggtgtaagttatcttgttgttgtgggcattgttgcttggtctatatatactaaaacaaaaactggttctggtcttcctaatggtcct |
7559381 |
T |
|
| Q |
201 |
tttg |
204 |
Q |
| |
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|||| |
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|
| T |
7559382 |
tttg |
7559385 |
T |
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