View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11442_low_1 (Length: 538)

Name: NF11442_low_1
Description: NF11442
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11442_low_1
NF11442_low_1
[»] chr1 (49 HSPs)
chr1 (1-518)||(39219122-39219633)
chr1 (294-518)||(36421630-36421854)
chr1 (281-442)||(48125671-48125832)
chr1 (343-516)||(42728994-42729167)
chr1 (363-448)||(33293590-33293675)
chr1 (286-456)||(8880374-8880544)
chr1 (296-442)||(43513033-43513178)
chr1 (386-516)||(13692510-13692641)
chr1 (296-398)||(29871288-29871390)
chr1 (344-498)||(41477003-41477157)
chr1 (312-458)||(16903439-16903593)
chr1 (293-378)||(23058470-23058555)
chr1 (347-461)||(23719524-23719637)
chr1 (293-378)||(34673282-34673367)
chr1 (258-458)||(5283558-5283758)
chr1 (296-419)||(13798201-13798324)
chr1 (291-449)||(2581506-2581661)
chr1 (296-378)||(44615478-44615560)
chr1 (296-378)||(44793009-44793091)
chr1 (293-382)||(17134947-17135036)
chr1 (293-398)||(19572512-19572617)
chr1 (293-398)||(24236761-24236866)
chr1 (337-398)||(29936400-29936461)
chr1 (337-398)||(34085219-34085280)
chr1 (293-374)||(50426661-50426742)
chr1 (337-397)||(12494995-12495055)
chr1 (337-397)||(28297919-28297979)
chr1 (394-516)||(45460143-45460267)
chr1 (311-418)||(25154845-25154952)
chr1 (293-392)||(36187220-36187319)
chr1 (342-449)||(47644908-47645015)
chr1 (373-459)||(5293490-5293576)
chr1 (336-398)||(42439713-42439775)
chr1 (337-406)||(23490815-23490884)
chr1 (346-378)||(9982943-9982975)
chr1 (346-378)||(49741060-49741092)
chr1 (346-398)||(51421842-51421894)
chr1 (317-392)||(34611063-34611138)
chr1 (312-378)||(10450078-10450144)
chr1 (296-378)||(35069892-35069974)
chr1 (293-375)||(45866185-45866267)
chr1 (291-372)||(3627983-3628064)
chr1 (293-398)||(16408926-16409031)
chr1 (293-398)||(18354080-18354185)
chr1 (246-303)||(20774657-20774714)
chr1 (243-275)||(10450015-10450047)
chr1 (346-398)||(13390397-13390449)
chr1 (256-378)||(16433130-16433249)
chr1 (337-397)||(23966858-23966918)
[»] chr4 (73 HSPs)
chr4 (296-516)||(21956818-21957037)
chr4 (302-516)||(42907758-42907971)
chr4 (343-516)||(8843856-8844028)
chr4 (343-516)||(8856820-8856992)
chr4 (317-516)||(33516097-33516297)
chr4 (387-514)||(33616210-33616337)
chr4 (296-501)||(25941024-25941229)
chr4 (344-460)||(36919050-36919166)
chr4 (338-501)||(4741262-4741424)
chr4 (347-518)||(21714030-21714201)
chr4 (265-454)||(25298806-25298994)
chr4 (312-516)||(12075651-12075855)
chr4 (293-449)||(35304517-35304673)
chr4 (293-380)||(14605926-14606013)
chr4 (310-516)||(37926432-37926636)
chr4 (390-501)||(39086042-39086152)
chr4 (346-516)||(9280943-9281113)
chr4 (344-462)||(9929219-9929337)
chr4 (344-449)||(16575050-16575155)
chr4 (387-516)||(25265242-25265370)
chr4 (297-429)||(36306743-36306875)
chr4 (243-378)||(29527821-29527956)
chr4 (243-378)||(30266281-30266416)
chr4 (243-378)||(30285772-30285907)
chr4 (302-457)||(37384203-37384357)
chr4 (387-516)||(17113098-17113226)
chr4 (296-405)||(19883060-19883169)
chr4 (312-492)||(3505163-3505343)
chr4 (293-397)||(6382273-6382377)
chr4 (291-378)||(31782622-31782709)
chr4 (367-460)||(7334260-7334351)
chr4 (343-449)||(12505581-12505687)
chr4 (394-516)||(30034545-30034667)
chr4 (249-392)||(32585484-32585633)
chr4 (293-398)||(31752445-31752550)
chr4 (336-449)||(43351419-43351532)
chr4 (243-378)||(10574370-10574505)
chr4 (293-430)||(10302040-10302178)
chr4 (293-378)||(1724311-1724396)
chr4 (293-378)||(6482036-6482121)
chr4 (293-378)||(21544588-21544673)
chr4 (387-448)||(40420680-40420741)
chr4 (337-398)||(47550398-47550459)
chr4 (348-449)||(55783442-55783543)
chr4 (348-449)||(55847624-55847725)
chr4 (337-397)||(5902659-5902719)
chr4 (337-397)||(7608960-7609020)
chr4 (293-397)||(11122870-11122974)
chr4 (337-397)||(44317525-44317585)
chr4 (299-375)||(48459493-48459569)
chr4 (356-419)||(43553414-43553477)
chr4 (302-356)||(3516348-3516402)
chr4 (344-513)||(23927693-23927859)
chr4 (293-378)||(11028082-11028167)
chr4 (293-378)||(15987263-15987348)
chr4 (293-378)||(47103747-47103832)
chr4 (337-398)||(53906350-53906411)
chr4 (337-397)||(26564821-26564881)
chr4 (366-442)||(50376425-50376501)
chr4 (337-397)||(55826668-55826728)
chr4 (343-378)||(568426-568461)
chr4 (352-423)||(3514105-3514176)
chr4 (318-397)||(21423851-21423930)
chr4 (318-397)||(31918584-31918663)
chr4 (311-378)||(45065258-45065325)
chr4 (293-375)||(47239386-47239468)
chr4 (311-380)||(1866568-1866637)
chr4 (246-303)||(26564927-26564984)
chr4 (293-398)||(39046941-39047046)
chr4 (77-146)||(48027749-48027818)
chr4 (363-419)||(54270584-54270640)
chr4 (344-408)||(4237346-4237410)
chr4 (346-382)||(28695196-28695232)
[»] chr6 (34 HSPs)
chr6 (242-516)||(9402454-9402727)
chr6 (252-505)||(8320754-8321007)
chr6 (239-442)||(32959800-32960002)
chr6 (346-506)||(13768947-13769107)
chr6 (296-516)||(20348930-20349149)
chr6 (342-518)||(1947840-1948016)
chr6 (296-442)||(256495-256642)
chr6 (311-501)||(34346023-34346222)
chr6 (244-380)||(29199836-29199972)
chr6 (293-377)||(28079696-28079780)
chr6 (345-458)||(10925495-10925608)
chr6 (296-501)||(29341131-29341341)
chr6 (246-378)||(14410809-14410940)
chr6 (293-398)||(12309555-12309660)
chr6 (293-398)||(32853827-32853932)
chr6 (291-378)||(24602854-24602941)
chr6 (387-448)||(34179102-34179164)
chr6 (299-392)||(15498313-15498406)
chr6 (293-398)||(27738755-27738860)
chr6 (337-397)||(3483967-3484027)
chr6 (293-397)||(5863383-5863487)
chr6 (346-398)||(12141368-12141420)
chr6 (387-455)||(14321793-14321861)
chr6 (293-378)||(2367329-2367414)
chr6 (293-378)||(10142518-10142603)
chr6 (337-398)||(24225681-24225742)
chr6 (293-362)||(34178329-34178398)
chr6 (346-378)||(10188126-10188158)
chr6 (337-397)||(27534668-27534728)
chr6 (299-398)||(32532523-32532622)
chr6 (293-382)||(14254957-14255045)
chr6 (264-380)||(7393858-7393974)
chr6 (346-378)||(12678147-12678179)
chr6 (337-397)||(32053072-32053132)
[»] chr8 (45 HSPs)
chr8 (296-516)||(8545352-8545572)
chr8 (344-516)||(28345356-28345528)
chr8 (345-501)||(29918487-29918643)
chr8 (297-516)||(17084111-17084332)
chr8 (296-514)||(30903911-30904130)
chr8 (311-516)||(27777216-27777422)
chr8 (343-500)||(36274924-36275080)
chr8 (297-442)||(12468223-12468367)
chr8 (246-378)||(17469258-17469390)
chr8 (311-462)||(9476031-9476182)
chr8 (387-516)||(6388599-6388728)
chr8 (311-518)||(5700219-5700426)
chr8 (368-458)||(5793508-5793598)
chr8 (297-402)||(14687378-14687483)
chr8 (296-405)||(30481424-30481533)
chr8 (243-430)||(9642301-9642489)
chr8 (293-397)||(24927933-24928037)
chr8 (343-458)||(17108299-17108414)
chr8 (293-378)||(20399595-20399680)
chr8 (368-419)||(14155494-14155545)
chr8 (293-372)||(27932422-27932501)
chr8 (296-391)||(37960965-37961060)
chr8 (293-406)||(45236040-45236153)
chr8 (346-382)||(1012618-1012654)
chr8 (346-406)||(14186295-14186355)
chr8 (302-398)||(24870033-24870129)
chr8 (337-397)||(32303045-32303105)
chr8 (317-377)||(34777070-34777130)
chr8 (353-430)||(27056615-27056693)
chr8 (293-358)||(6388516-6388581)
chr8 (293-374)||(15068588-15068668)
chr8 (293-398)||(29108822-29108927)
chr8 (293-398)||(39445576-39445681)
chr8 (402-442)||(11880867-11880907)
chr8 (402-442)||(11898283-11898323)
chr8 (474-518)||(29416359-29416403)
chr8 (337-380)||(40789590-40789633)
chr8 (337-375)||(2075864-2075902)
chr8 (296-378)||(2183609-2183691)
chr8 (387-437)||(35747283-35747332)
chr8 (246-303)||(2075775-2075832)
chr8 (297-378)||(10297461-10297542)
chr8 (344-377)||(36897060-36897093)
chr8 (302-375)||(40248380-40248453)
chr8 (337-377)||(43113670-43113710)
[»] chr2 (42 HSPs)
chr2 (292-518)||(25210241-25210467)
chr2 (296-515)||(30696791-30697010)
chr2 (294-516)||(35248386-35248604)
chr2 (312-516)||(34214676-34214879)
chr2 (344-458)||(13531873-13531987)
chr2 (249-397)||(6027845-6027993)
chr2 (390-517)||(13954610-13954737)
chr2 (390-517)||(14095817-14095944)
chr2 (299-506)||(31600774-31600981)
chr2 (343-501)||(35965215-35965374)
chr2 (337-419)||(4961495-4961577)
chr2 (338-492)||(40359234-40359388)
chr2 (293-391)||(13705361-13705459)
chr2 (293-457)||(17845391-17845556)
chr2 (293-378)||(38342519-38342604)
chr2 (83-138)||(15886366-15886421)
chr2 (386-516)||(29656828-29656959)
chr2 (387-442)||(34544405-34544460)
chr2 (387-501)||(35409248-35409360)
chr2 (293-398)||(8915938-8916042)
chr2 (359-440)||(11958957-11959038)
chr2 (293-398)||(37999467-37999572)
chr2 (337-397)||(24414176-24414236)
chr2 (293-417)||(34458833-34458956)
chr2 (291-378)||(18485652-18485739)
chr2 (295-378)||(43371557-43371640)
chr2 (390-448)||(37309828-37309886)
chr2 (293-398)||(7314648-7314753)
chr2 (293-374)||(24051624-24051705)
chr2 (337-378)||(30846950-30846991)
chr2 (293-374)||(37106700-37106781)
chr2 (337-397)||(36128150-36128210)
chr2 (346-397)||(9632371-9632422)
chr2 (293-375)||(22900801-22900883)
chr2 (410-468)||(33174307-33174365)
chr2 (297-378)||(3547170-3547251)
chr2 (337-378)||(14331531-14331572)
chr2 (317-378)||(42798012-42798073)
chr2 (346-407)||(45256798-45256859)
chr2 (346-398)||(10920629-10920681)
chr2 (243-275)||(39256398-39256430)
chr2 (311-371)||(45115569-45115629)
[»] chr5 (38 HSPs)
chr5 (296-518)||(38972785-38973007)
chr5 (246-458)||(6810081-6810293)
chr5 (337-513)||(29664839-29665015)
chr5 (243-501)||(17153049-17153306)
chr5 (344-516)||(27900453-27900623)
chr5 (296-448)||(16311297-16311448)
chr5 (387-518)||(35583980-35584110)
chr5 (296-506)||(40187661-40187870)
chr5 (246-398)||(35193943-35194095)
chr5 (302-489)||(8020507-8020694)
chr5 (246-397)||(12447365-12447515)
chr5 (300-516)||(18451893-18452109)
chr5 (361-458)||(12457440-12457537)
chr5 (247-378)||(12712512-12712643)
chr5 (299-398)||(30996579-30996678)
chr5 (295-425)||(32574941-32575071)
chr5 (343-516)||(7350458-7350631)
chr5 (246-406)||(38006423-38006583)
chr5 (243-374)||(10822477-10822608)
chr5 (293-398)||(4920809-4920914)
chr5 (371-506)||(16366526-16366663)
chr5 (296-377)||(28569025-28569106)
chr5 (346-398)||(10127064-10127116)
chr5 (293-377)||(20973497-20973581)
chr5 (293-442)||(24207626-24207772)
chr5 (247-378)||(12773776-12773907)
chr5 (299-398)||(15890190-15890288)
chr5 (387-449)||(457467-457529)
chr5 (293-398)||(4583102-4583207)
chr5 (337-398)||(6092563-6092624)
chr5 (337-406)||(12834619-12834688)
chr5 (293-398)||(12866552-12866657)
chr5 (364-449)||(39887173-39887258)
chr5 (350-398)||(22694959-22695007)
chr5 (346-398)||(42987533-42987585)
chr5 (293-375)||(29245952-29246034)
chr5 (337-398)||(1218738-1218799)
chr5 (293-378)||(23044992-23045077)
[»] chr3 (40 HSPs)
chr3 (296-494)||(30904819-30905016)
chr3 (252-458)||(772756-772958)
chr3 (363-516)||(27252433-27252585)
chr3 (387-454)||(37032192-37032259)
chr3 (312-398)||(48305660-48305746)
chr3 (337-398)||(44639257-44639318)
chr3 (337-398)||(52198138-52198199)
chr3 (293-382)||(53631903-53631992)
chr3 (337-397)||(23546986-23547046)
chr3 (368-419)||(42243349-42243400)
chr3 (311-377)||(34119660-34119726)
chr3 (343-449)||(40890279-40890384)
chr3 (293-382)||(4016044-4016133)
chr3 (293-398)||(44172609-44172714)
chr3 (293-398)||(44179309-44179414)
chr3 (293-462)||(3414537-3414702)
chr3 (293-397)||(34154398-34154502)
chr3 (293-392)||(7469778-7469877)
chr3 (312-425)||(3385875-3385988)
chr3 (311-372)||(29842317-29842378)
chr3 (337-378)||(31271301-31271342)
chr3 (293-378)||(39655273-39655358)
chr3 (337-398)||(39728654-39728715)
chr3 (337-378)||(44252750-44252791)
chr3 (293-377)||(4557305-4557389)
chr3 (312-375)||(23580833-23580896)
chr3 (346-397)||(31126848-31126899)
chr3 (291-398)||(49025664-49025770)
chr3 (293-375)||(10043282-10043364)
chr3 (293-375)||(48390817-48390899)
chr3 (337-398)||(22535885-22535946)
chr3 (337-378)||(29284339-29284380)
chr3 (246-303)||(29284426-29284483)
chr3 (293-398)||(49580047-49580152)
chr3 (337-378)||(54317147-54317188)
chr3 (243-279)||(1772337-1772373)
chr3 (352-396)||(2487780-2487824)
chr3 (243-303)||(10043220-10043280)
chr3 (411-455)||(14216406-14216450)
chr3 (293-397)||(44953435-44953539)
[»] chr7 (53 HSPs)
chr7 (241-494)||(23533552-23533806)
chr7 (344-518)||(3773937-3774111)
chr7 (241-462)||(19439958-19440180)
chr7 (338-516)||(3156953-3157131)
chr7 (294-458)||(4101470-4101634)
chr7 (293-454)||(43550417-43550577)
chr7 (246-390)||(24425376-24425520)
chr7 (293-442)||(29292646-29292797)
chr7 (256-462)||(23475226-23475433)
chr7 (293-430)||(8906589-8906727)
chr7 (346-516)||(11472767-11472935)
chr7 (343-516)||(37217874-37218047)
chr7 (293-398)||(16866157-16866262)
chr7 (293-375)||(10072477-10072559)
chr7 (293-383)||(26622954-26623044)
chr7 (293-378)||(18825872-18825957)
chr7 (387-512)||(31345400-31345525)
chr7 (293-378)||(32546200-32546285)
chr7 (293-397)||(35074459-35074563)
chr7 (246-377)||(3920547-3920678)
chr7 (394-492)||(6557827-6557925)
chr7 (293-398)||(27850326-27850431)
chr7 (337-397)||(45380096-45380156)
chr7 (293-372)||(3226946-3227025)
chr7 (295-378)||(31426016-31426099)
chr7 (387-462)||(36251024-36251099)
chr7 (299-382)||(48327449-48327532)
chr7 (296-382)||(16079017-16079103)
chr7 (296-377)||(5377094-5377175)
chr7 (293-378)||(12980385-12980470)
chr7 (293-398)||(17885453-17885558)
chr7 (293-378)||(18683982-18684067)
chr7 (296-373)||(25782910-25782987)
chr7 (337-398)||(30650619-30650680)
chr7 (293-398)||(38152875-38152980)
chr7 (293-398)||(41103644-41103749)
chr7 (296-392)||(10995837-10995933)
chr7 (337-397)||(18125272-18125332)
chr7 (337-397)||(21702648-21702708)
chr7 (299-398)||(43507433-43507532)
chr7 (346-392)||(7780002-7780048)
chr7 (293-378)||(2630574-2630658)
chr7 (246-303)||(17851947-17852004)
chr7 (293-378)||(22973396-22973481)
chr7 (388-449)||(24903354-24903415)
chr7 (249-378)||(28309500-28309629)
chr7 (387-464)||(40335734-40335811)
chr7 (346-378)||(17851862-17851894)
chr7 (346-398)||(37196051-37196103)
chr7 (337-377)||(37579271-37579311)
chr7 (350-378)||(44794084-44794112)
chr7 (346-398)||(45885818-45885870)
chr7 (344-448)||(48708656-48708759)
[»] scaffold0005 (1 HSPs)
scaffold0005 (293-380)||(211365-211452)
[»] scaffold0036 (1 HSPs)
scaffold0036 (293-382)||(33392-33481)
[»] scaffold0244 (1 HSPs)
scaffold0244 (312-516)||(4600-4803)
[»] scaffold0157 (1 HSPs)
scaffold0157 (343-449)||(14790-14896)
[»] scaffold1322 (1 HSPs)
scaffold1322 (387-455)||(1037-1105)
[»] scaffold0264 (1 HSPs)
scaffold0264 (337-454)||(17499-17616)
[»] scaffold0184 (1 HSPs)
scaffold0184 (296-378)||(2972-3054)
[»] scaffold0022 (1 HSPs)
scaffold0022 (293-398)||(90580-90685)
[»] scaffold0013 (2 HSPs)
scaffold0013 (337-378)||(105513-105554)
scaffold0013 (343-378)||(128171-128206)
[»] scaffold0294 (1 HSPs)
scaffold0294 (346-398)||(14758-14810)
[»] scaffold0198 (1 HSPs)
scaffold0198 (343-408)||(20789-20854)
[»] scaffold0015 (1 HSPs)
scaffold0015 (337-378)||(55941-55982)
[»] scaffold0009 (1 HSPs)
scaffold0009 (345-410)||(107443-107508)
[»] scaffold0008 (2 HSPs)
scaffold0008 (293-378)||(67752-67837)
scaffold0008 (293-378)||(75595-75680)


Alignment Details
Target: chr1 (Bit Score: 379; Significance: 0; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 1 - 518
Target Start/End: Complemental strand, 39219633 - 39219122
Alignment:
Q  1 agtgaataaactcgtcaaataaataggaatagattagagtattgatttgattagaacttcaagctctttcttgagtagacttttactactccatgaatta 100  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39219633 agtgaataaactcgtgaaataagtaggaatagatcagagtattgatttgattagaacttcaagctcttttttgagtagacttttactactccatgaatta 39219534  T
Q  101 attttcttccatatcttatccttgataaagctaaaagtggttttttcgcttctctgtatcatagaaagtagtatcaaatatttataagtaccaagaacaa 200  Q
    |||||||||||||||||      ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||    
T  39219533 attttcttccatatctt------gataaagctaaaagtggttttttcgcttccctgtatcatagaaagtagtaccaaatatttatcggtaccaagaacaa 39219440  T
Q  201 catgtacattgtgtattaaatagcaacaaaacctattaatgcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttg 300  Q
    |||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  39219439 catgtacattgtgtatcaagtagcaacaaaacccattcatgcgggtacccgcccaaaccaatcccaatttgacgggtttccttcgcttttatcgggtttg 39219340  T
Q  301 ggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatca 400  Q
    ||||||| | |||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39219339 ggttttccccgattttaaaacacgggtacggaacaagtaacggggatacatgtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatta 39219240  T
Q  401 atttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagt 500  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  39219239 atttattacctcttttatataaatagaaactcaaaccctaaatcatttcgctcacacagtcacagtctcattttttcatatgacactcacttatcatagt 39219140  T
Q  501 tatctcatttctcctttc 518  Q
    |||||| |||||||||||    
T  39219139 tatctcctttctcctttc 39219122  T

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Target: chr1; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 294 - 518
Target Start/End: Complemental strand, 36421854 - 36421630
Alignment:
Q  294 gggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtag 393  Q
    |||| |||||||||||  ||| ||||| |||||||||  | ||||||  ||||||||||||| ||||||||||  ||||||||||||||    ||| |||    
T  36421854 gggtatgggttttctccaattataaaatacgggtacgggataagtaatagggatataggtactcaccccgaacttatacccaaactcgtctcgaatatag 36421755  T
Q  394 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactta 493  Q
    ||||||||||||||| |||| ||||| ||||| |||||| ||| ||||| ||||||  ||||||||||| | ||| ||| ||||| ||| || |||||||    
T  36421754 aaaatcaatttattatccctcttatataaataaaaactcgaactctaaatcatttcattcacacagtcagagtctcaatctttcagatggcaatcactta 36421655  T
Q  494 tcatagttatctcatttctcctttc 518  Q
    |||||||| |||| |||||||||||    
T  36421654 tcatagttctctcttttctcctttc 36421630  T

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Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 281 - 442
Target Start/End: Original strand, 48125671 - 48125832
Alignment:
Q  281 cttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 380  Q
    ||||| ||| |||| |||||| ||||  ||||||||||||||||||||||  ||  |||||  ||||||||||| |||||||||||||||||||||||||    
T  48125671 cttcgttttgactgagtttggatttttcctgattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccatacccaaactc 48125770  T
Q  381 gttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    ||    ||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||    
T  48125771 gtcgcgaatgtagaaaatcaatttactaccgcttttatataaatagaaactcaaactctaaa 48125832  T

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Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 343 - 516
Target Start/End: Original strand, 42728994 - 42729167
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    ||||||| |||| | ||||||||| ||||||||||| |||||| |||||||||||| ||||||| | |||||||||| ||||||||||| | || |||||    
T  42728994 gggatatgggtaactaccccgaactcatacccaaacacgttctgaatgtagaaaataaatttatcatcccttttatataaatagaaacttatacactaaa 42729093  T
Q  443 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
     |||||| |||||||||||| | ||| | | ||||| || |||| |||||||||||||| |||| | |||||||    
T  42729094 tcatttcactcacacagtcagagtctcagtctttcagataacacccacttatcatagttctctcttgtctcctt 42729167  T

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Target: chr1; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 33293590 - 33293675
Alignment:
Q  363 gaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccattt 448  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||| |||||    
T  33293590 gaacccatacccaaactcgttccgaatgtagaaaatcaatttagtacccattttatatcaatagaaactcaaaccctaaatcattt 33293675  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 456
Target Start/End: Complemental strand, 8880544 - 8880374
Alignment:
Q  286 cttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttct 385  Q
    |||| ||| ||||||||||||||  ||||| |||||||| ||||   ||| ||||  |||||| ||||| |||||| | |||||||||||||| ||| |     
T  8880544 ctttgacttggtttgggttttcttcgatttaaaaacacgagtacaggacaggtaatggggataaaggtatccaccctggacccatacccaaacccgtccc 8880445  T
Q  386 aaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcaca 456  Q
    |||||   ||||| ||||||||||||||||| || ||||||||||||||||  |||| |||||| ||||||    
T  8880444 aaatgctaaaaataaatttattaccccttttttataaatagaaactcaaactttaaatcatttcactcaca 8880374  T

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Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 296 - 442
Target Start/End: Original strand, 43513033 - 43513178
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    ||||| |||||||| ||||| |||||||||||| ||||||||||||  ||||||||  ||  ||| | ||| ||||| ||||| ||||   |||||| ||    
T  43513033 gtttgagttttctccgattt-aaaacacgggtatgaaacaagtaacatggatatagacactaacctcaaactcatactcaaacccgtttcgaatgtaaaa 43513131  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    ||||||||||| || | ||||||| ||||||||||||||||||||||    
T  43513132 aatcaatttataactctttttatataaatagaaactcaaaccctaaa 43513178  T

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Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 386 - 516
Target Start/End: Complemental strand, 13692641 - 13692510
Alignment:
Q  386 aaatgtagaaaatcaattt-attaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgac 484  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||  |||||||||| |||||| | |||||| | | | ||| | | ||||| | |||    
T  13692641 aaatgtagaaaatcaattttattatcccttttatataaatagaaaccaaaaccctaaatcatttcacccacacaattagagtcttactctttcagacgac 13692542  T
Q  485 actcacttatcatagttatctcatttctcctt 516  Q
    |||||||||| |||||| |||| |||||||||    
T  13692541 actcacttattatagttctctcttttctcctt 13692510  T

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Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 29871288 - 29871390
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||||||| ||||| |||||| ||||| |  ||| |||||||| |||||||||||||||| |||| ||||||||||| ||| |  |||||||||    
T  29871288 gtttgggttttctccgatttcaaaacatgggtatgggacaggtaactggtatataggtacccaccctgaactcatacccaaacccgtcccgaatgtagaa 29871387  T
Q  396 aat 398  Q
    |||    
T  29871388 aat 29871390  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 498
Target Start/End: Original strand, 41477003 - 41477157
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    ||||||| |||||||||||||| |||||||||||| ||| |  || | ||||||||||||| |||||| ||||||| ||| |||||   ||||||||||     
T  41477003 ggatatatgtacccaccccgaatccatacccaaacccgtcccgaaagcagaaaatcaatttgttaccctttttatataaagagaaatggaaaccctaaat 41477102  T
Q  444 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcata 498  Q
     |||||  ||||||||||| | |||   | ||||| ||||||| |||||||||||    
T  41477103 tatttcattcacacagtcaaagtctccgtctttcagatgacacccacttatcata 41477157  T

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Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 458
Target Start/End: Complemental strand, 16903593 - 16903439
Alignment:
Q  312 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa--------tcaatt 403  Q
    ||||||||||||| |||||  | | ||||  |||||||||||||||||||||||| ||||||||||| ||| |  |||||| ||||        ||||||    
T  16903593 attttaaaacacgagtacgggataggtaatggggatataggtacccaccccgaactcatacccaaacccgtcccgaatgtaaaaaaaaaaaaaatcaatt 16903494  T
Q  404 tattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacaca 458  Q
    |||| ||| ||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  16903493 tattgccctttttatataaatataaactcaaaccctaaattatttcactcacaca 16903439  T

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Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 23058555 - 23058470
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||| |||||||| ||||| ||||  || |||||| ||  ||||| ||||||||||||||||||||||||||||||||||||    
T  23058555 tgggtttgagttttctccgatttcaaaatgcgagtacgagacgggtaacggggatataggtacccaccccgaacccatacccaaac 23058470  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 461
Target Start/End: Complemental strand, 23719637 - 23719524
Alignment:
Q  347 tataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccat 446  Q
    |||||||| ||| ||||||| ||||| ||||||||| |  |||||| ||| |||||||| ||||| ||||||| ||||||||||||||||  |||| |||    
T  23719637 tataggtatccatcccgaactcatactcaaactcgtcccgaatgtacaaa-tcaatttactaccctttttatataaatagaaactcaaactataaatcat 23719539  T
Q  447 ttcgctcacacagtc 461  Q
    ||| || ||||||||    
T  23719538 ttcactaacacagtc 23719524  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 34673282 - 34673367
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||  |  |||| |||||||||||| || ||  ||||| || |||||||||||||||||||||||||||||||||    
T  34673282 tgggtttgggtttttcccaatttcaaaacacgggtatgagactggtaacgggtatataggtacccaccccgaacccatacccaaac 34673367  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 458
Target Start/End: Original strand, 5283558 - 5283758
Alignment:
Q  258 ccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtaccc 357  Q
    |||| ||||| |||| ||||||  |||| ||| |||| |||||||| |||| |||| | |||||| | |||||  ||  ||||  |||||| | ||||||    
T  5283558 ccaaacccaaattgatggatttttttcggtttgactgagtttgggtattctttgatctcaaaacatgagtacgggacgggtaatggggatagaagtaccc 5283657  T
Q  358 accccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacac 457  Q
    ||| ||||| |||||| |||| |||    | |||||||||||||||||| | ||||||| || |||||| |||||||||  |||| |||||| |||||||    
T  5283658 acctcgaactcatacctaaacccgtctggattgtagaaaatcaatttatcatcccttttgtataaataggaactcaaactttaaatcatttctctcacac 5283757  T
Q  458 a 458  Q
    |    
T  5283758 a 5283758  T

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Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 419
Target Start/End: Complemental strand, 13798324 - 13798201
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||||  | ||||| |||||||||||| || |   |||||  |||||||  || ||||||| ||  |||||| |||| | | ||||||||||||    
T  13798324 gtttgggtttttcccgatttcaaaacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacctaaacccatcctaaatgtagaa 13798225  T
Q  396 aatcaatttattaccccttttata 419  Q
    ||||||||||||||||||||||||    
T  13798224 aatcaatttattaccccttttata 13798201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 291 - 449
Target Start/End: Complemental strand, 2581661 - 2581506
Alignment:
Q  291 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatg 390  Q
    |||| ||||| ||||||||||||||||||||| ||||| |  ||  ||||| ||||||||| | ||||||   |||||||||  ||||  |||  ||| |    
T  2581661 actgagtttgagttttctctgattttaaaacatgggtaagggacgggtaac-gggatatagatgcccacctacaacccatacttaaacctgtttcaaa-g 2581564  T
Q  391 tagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 449  Q
    ||||||||||||||| || || ||||||| |||||||||||||||| ||||| ||||||    
T  2581563 tagaaaatcaatttaatatcc-ttttatataaatagaaactcaaactctaaatcatttc 2581506  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 44615478 - 44615560
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||| ||||||| |||||||||||| |  ||  ||||| || ||||||||||||||||| ||| |||||||||||    
T  44615478 gtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaac 44615560  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 296 - 378
Target Start/End: Complemental strand, 44793091 - 44793009
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||| ||||||| |||||||||||| |  ||  ||||| || ||||||||||||||||| ||| |||||||||||    
T  44793091 gtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaac 44793009  T

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Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 382
Target Start/End: Complemental strand, 17135036 - 17134947
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 382  Q
    ||||| ||||||||| | ||||| |||||||||||| || ||  ||||| || |||||||||||  ||||||||||||||||| ||||||    
T  17135036 tgggtatgggttttccccgatttcaaaacacgggtatgagacgggtaacgggtatataggtaccatccccgaacccatacccatactcgt 17134947  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 19572512 - 19572617
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||  | ||||| |||||||||||| |  ||| ||||| || ||||||||||||||||||||||||||| || || ||| | |||||||    
T  19572512 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgta 19572611  T
Q  393 gaaaat 398  Q
     |||||    
T  19572612 aaaaat 19572617  T

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Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 24236761 - 24236866
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| | |||  | ||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  24236761 tgggtatgggttttccccgatctcaaaacacgggtatggaacggggaacgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgta 24236860  T
Q  393 gaaaat 398  Q
     |||||    
T  24236861 aaaaat 24236866  T

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Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 29936461 - 29936400
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  29936461 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 29936400  T

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Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 34085280 - 34085219
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| ||| |||| |||||||||||||||||||||||| |||||| ||||||||| |||||    
T  34085280 gtaacggggttatatgtacccaccccgaacccatacccatactcgtcctaaatgtaaaaaat 34085219  T

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Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 50426661 - 50426742
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 374  Q
    ||||| |||| |||| ||||||| |||||||||||| || ||   |||| || |||||||||||||||||||||||||||||    
T  50426661 tgggtatgggctttccctgatttcaaaacacgggtatgagacggataacgggtatataggtacccaccccgaacccataccc 50426742  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 12495055 - 12494995
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||| ||||||||||||||||| ||| | ||||||||||||    
T  12495055 gtaacgggtatataggtacccacctcgaacccatacccaaacccgtcccaaatgtagaaaa 12494995  T

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Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 28297979 - 28297919
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  28297979 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 28297919  T

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Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 516
Target Start/End: Original strand, 45460143 - 45460267
Alignment:
Q  394 aaaatcaatttattacccctttt-atagaaatagaaactcaaaccc-taaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcact 491  Q
    |||||||  |||||||||||||| ||| ||||||||||  |||||| |||| |||||| |||||||| || || | | ||| ||||| ||||||||||||    
T  45460143 aaaatcacgttattacccctttttatataaatagaaacataaacccctaaatcatttcactcacacaatcgcagtttcaatctttcagatgacactcact 45460242  T
Q  492 tatcatagttatctcatttctcctt 516  Q
    |||| || || |||| |||||||||    
T  45460243 tatcgtaattttctcttttctcctt 45460267  T

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Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 25154845 - 25154952
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 410  Q
    ||||| |||||||| |||||  || |||||  |||||||| ||||||||  ||||| ||| ||||||| ||| || ||| ||||||||||||| | ||||    
T  25154845 gatttcaaaacacgagtacgggacgagtaatggggatataagtacccacttcgaactcatgcccaaacccgtcctgaatttagaaaatcaattcactacc 25154944  T
Q  411 ccttttat 418  Q
    ||||||||    
T  25154945 ccttttat 25154952  T

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Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 392
Target Start/End: Original strand, 36187220 - 36187319
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || |||||||||||||||| |||||||||||||||| ||| | |||||||    
T  36187220 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccctgaacccatacccaaacccgtcccaaatgta 36187319  T

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Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 449
Target Start/End: Original strand, 47644908 - 47645015
Alignment:
Q  342 tgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaa 441  Q
    ||||||| | ||||| ||||||||| |||| ||| |||||| |  |||||| || |  ||||||||| |||||||||| ||||||||||||| | |||||    
T  47644908 tgggatagaagtacctaccccgaactcatatccatactcgtcccgaatgtaaaataataatttattatcccttttatataaatagaaactcagatcctaa 47645007  T
Q  442 accatttc 449  Q
    | ||||||    
T  47645008 atcatttc 47645015  T

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Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 459
Target Start/End: Original strand, 5293490 - 5293576
Alignment:
Q  373 ccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacag 459  Q
    |||||||||| |  ||||| |||| ||||||||||| | |||||||| |||||||||||||||| | |||| |||||  ||||||||    
T  5293490 ccaaactcgtcccgaatgttgaaagtcaatttattatcacttttatataaatagaaactcaaactcaaaactatttcaatcacacag 5293576  T

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Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 42439713 - 42439775
Alignment:
Q  336 agtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    |||||| || |||||||||||||||||||||||||| |||||||| | | ||||||| |||||    
T  42439713 agtaacgggtatataggtacccaccccgaacccatatccaaactcatcccaaatgtaaaaaat 42439775  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 406
Target Start/End: Original strand, 23490815 - 23490884
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 406  Q
    ||||| || |||||||||||||||||||||||||||| |||| ||| | ||||||| ||||  |||||||    
T  23490815 gtaacgggtatataggtacccaccccgaacccataccaaaacccgtcccaaatgtaaaaaactaatttat 23490884  T

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Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 9982943 - 9982975
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||||||||||||||||||||||||    
T  9982943 atataggtacccaccccgaacccatacccaaac 9982975  T

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Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 49741060 - 49741092
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||||||||||||||||||||||||    
T  49741060 atataggtacccaccccgaacccatacccaaac 49741092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 398
Target Start/End: Complemental strand, 51421894 - 51421842
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| ||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  51421894 atatatgtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 51421842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 34611138 - 34611063
Alignment:
Q  317 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    |||||||||||| |  ||| |||||  | |||||||||| |||||||||||||||||||||| ||| | |||||||    
T  34611138 aaaacacgggtatgggacatgtaacgtgtatataggtactcaccccgaacccatacccaaacccgtcccaaatgta 34611063  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 10450078 - 10450144
Alignment:
Q  312 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||| |||||||||   |  ||||| |||||||| ||||||||||||||| |||||||||||    
T  10450078 attttaaaatacgggtacggggcgggtaacagggatatatgtacccaccccgaactcatacccaaac 10450144  T

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Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 35069892 - 35069974
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| |||||| | ||||| | || |||||||| | ||  ||||| |||||||| ||||||||||||||||||||| |||||    
T  35069892 gtttgagttttccccgatttcataatacgggtacaagacgggtaacagggatatatgtacccaccccgaacccatactcaaac 35069974  T

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Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 375
Target Start/End: Original strand, 45866185 - 45866267
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    ||||| ||||||||| | ||||| |||||||||||| || ||| ||||   | ||||||||||||||||| ||| ||||||||    
T  45866185 tgggtatgggttttccccgatttcaaaacacgggtatgagacaggtaatgagtatataggtacccaccccaaactcataccca 45866267  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 372
Target Start/End: Original strand, 3627983 - 3628064
Alignment:
Q  291 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 372  Q
    ||||||| | ||||||| | ||||| |||||||||||| |  ||  ||||| || || ||||||||||||||||||||||||    
T  3627983 actgggtataggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatgtaggtacccaccccgaacccatac 3628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 16409031 - 16408926
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| |  |||| |||||||||||| |  ||  ||||| || ||||||||||| |||||||||||||| | |||| || || |||||||    
T  16409031 tgggtatgggttttccccaatttcaaaacacgggtatgggacgggtaacaggtatataggtaccgaccccgaacccatagctaaacccgctccaaatgta 16408932  T
Q  393 gaaaat 398  Q
     |||||    
T  16408931 aaaaat 16408926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 18354080 - 18354185
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||||| |||||| ||||| |  ||  ||||| || ||||| || ||||||||||||| ||||||| |||||| | |||||||    
T  18354080 tgggtatgggttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataagttcccaccccgaaccgatacccatactcgtcccaaatgta 18354179  T
Q  393 gaaaat 398  Q
     |||||    
T  18354180 aaaaat 18354185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 20774714 - 20774657
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 303  Q
    ||||||||| |||||| ||||||||||||||||| |  || ||| |||||||||||||    
T  20774714 tacccgcccgaaccaaacccaatttgacggattttccccgttttgactgggtttgggt 20774657  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 10450015 - 10450047
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacgg 275  Q
    ||||||||||||||||||| |||||||||||||    
T  10450015 gggtacccgcccaaaccaaccccaatttgacgg 10450047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 398
Target Start/End: Complemental strand, 13390449 - 13390397
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||||||||||||||| |||||||| || ||| | ||||||| |||||    
T  13390449 atataggtacccaccccgaactcatacccatacccgtcccaaatgtaaaaaat 13390397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 16433130 - 16433249
Alignment:
Q  256 aaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtac 355  Q
    |||||| | ||||||||||||||| |  |  ||| | |||||||| |||||||| ||||| |||||||||||| |  ||  ||||| |  ||||||||||    
T  16433130 aaccaaactcaatttgacggattttccccattttgattgggtttgagttttctccgatttcaaaacacgggtatgggacgggtaacggatatataggtac 16433229  T
Q  356 ccaccccgaacccatacccaaac 378  Q
       ||||||||||||||||||||    
T  16433230 ---ccccgaacccatacccaaac 16433249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 23966918 - 23966858
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||| || || ||| | ||||||| ||||    
T  23966918 gtaacgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgtaaaaaa 23966858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 8e-50; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 296 - 516
Target Start/End: Original strand, 21956818 - 21957037
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    ||||||||||| || |||||||||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||||||||||||   |||||||||    
T  21956818 gtttgggttttttccgattttaaaacacgggtacggaatgagtaacggggatataggtgcccaccccgaacccatacccaaactcgttacgaatgtagaa 21956917  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 495  Q
    ||||||||||||| |||||||||| ||||| |||| ||||||||||| ||||||  || |||||||| | | | | | ||| | |||||||||| |||||    
T  21956918 aatcaatttatta-cccttttatataaataaaaacccaaaccctaaatcatttcattcgcacagtcagagtgtcagtcttttagatgacactcatttatc 21957016  T
Q  496 atagttatctcatttctcctt 516  Q
    |||||||| || |||||||||    
T  21957017 atagttatatcttttctcctt 21957037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 302 - 516
Target Start/End: Complemental strand, 42907971 - 42907758
Alignment:
Q  302 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaa 401  Q
    |||||||| || || ||||||||| ||||  || |||||  |||||||||||||||||||||| ||||||||||||||||| |  |||||||||||||||    
T  42907971 gttttctccgaattcaaaacacggatacgggacgagtaatggggatataggtacccaccccgagcccatacccaaactcgtcccgaatgtagaaaatcaa 42907872  T
Q  402 tttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 501  Q
    |||| || | |||||||| |||||||||||||||||||||| |||||| |||| ||||| | | ||| | | ||||| ||||||| ||||||||||||||    
T  42907871 tttacta-ctcttttatataaatagaaactcaaaccctaaatcatttcactcatacagttagagtcttagtctttcagatgacacacacttatcatagtt 42907773  T
Q  502 atctcatttctcctt 516  Q
     | || |||||||||    
T  42907772 ctatcttttctcctt 42907758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 343 - 516
Target Start/End: Original strand, 8843856 - 8844028
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    ||||||||| ||||||||| |||| ||||||||||| |||  | |||||||||||| |||||||||||||||| ||| ||||||||||| ||| ||||||    
T  8843856 gggatatagatacccaccc-gaactcatacccaaacccgtcgtgaatgtagaaaattaatttattacccctttcatataaatagaaacttaaatcctaaa 8843954  T
Q  443 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
     |||||| |||||||||||||| ||| |   ||||| |||||||||||||||||||||| |||| |||||||||    
T  8843955 tcatttcactcacacagtcacagtcttagactttcagatgacactcacttatcatagttctctcttttctcctt 8844028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 343 - 516
Target Start/End: Original strand, 8856820 - 8856992
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    ||||||||| ||||||||| |||| ||||||||||| |||  | |||||||||||| |||||||||||||||| ||| ||||||||||| ||| ||||||    
T  8856820 gggatatagatacccaccc-gaactcatacccaaacccgtcgtgaatgtagaaaattaatttattacccctttcatataaatagaaacttaaatcctaaa 8856918  T
Q  443 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
     |||||| |||||||||||||| ||| |   ||||| |||||||||||||||||||||| |||| |||||||||    
T  8856919 tcatttcactcacacagtcacagtcttagactttcagatgacactcacttatcatagttctctcttttctcctt 8856992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 317 - 516
Target Start/End: Original strand, 33516097 - 33516297
Alignment:
Q  317 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacccctttt 416  Q
    ||||||||||||||| |   ||||| |||||||| |||||||||||||||| |||||||||| |||   ||||||| ||||||||| |||||||||||||    
T  33516097 aaaacacgggtacgagatgggtaacagggatataagtacccaccccgaacctatacccaaacccgtctcaaatgtaaaaaatcaatgtattacccctttt 33516196  T
Q  417 atagaaatagaaactcaaaccctaaaccatttcgctcaca-cagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcct 515  Q
    ||| ||||| |||||||||||||||| |||||| |||||| | || | | |||   | ||||| ||||||||||||||||||| || |||| ||||||||    
T  33516197 atataaataaaaactcaaaccctaaatcatttcactcacacccgttagagtcttggtctttcagatgacactcacttatcataattctctcttttctcct 33516296  T
Q  516 t 516  Q
    |    
T  33516297 t 33516297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 387 - 514
Target Start/End: Original strand, 33616210 - 33616337
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 486  Q
    ||||||||||||||||||||||||||||||||| ||||| |||   |||||||||| |||||| |||||||||||| | ||| ||| |||||||||||||    
T  33616210 aatgtagaaaatcaatttattaccccttttatataaataaaaatcaaaaccctaaatcatttcactcacacagtcagagtcttaatatttcatatgacac 33616309  T
Q  487 tcacttatcatagttatctcatttctcc 514  Q
    ||||||||||||||| |||| |||||||    
T  33616310 tcacttatcatagttctctcttttctcc 33616337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 296 - 501
Target Start/End: Complemental strand, 25941229 - 25941024
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||||  | ||||| ||||||||||||||  ||| ||||| || | |||||||||||||||||||||||||||||||  ||     ||||||||    
T  25941229 gtttgggtttttcccgatttcaaaacacgggtacgggacaggtaacgggaagataggtacccaccccgaacccatacccaaacatgtctcggatgtagaa 25941130  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 495  Q
    ||||||||||| |||||||||||| |||||||||| |||  |||||| || ||| |||||||  ||| | ||| | | ||||| |||||| |||||||||    
T  25941129 aatcaatttataaccccttttatataaatagaaacccaaggcctaaatcaattcactcacacgatcatagtcttagtctttcagatgacattcacttatc 25941030  T
Q  496 atagtt 501  Q
    ||||||    
T  25941029 atagtt 25941024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 344 - 460
Target Start/End: Complemental strand, 36919166 - 36919050
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    ||||||||||| ||| ||  |||||||||||||||||||||   ||||||||||||| ||||||||| |||||||| |||||||||||||||| |||||     
T  36919166 ggatataggtatccatccttaacccatacccaaactcgttccggatgtagaaaatcagtttattaccacttttatataaatagaaactcaaactctaaat 36919067  T
Q  444 catttcgctcacacagt 460  Q
    |||||| ||||||||||    
T  36919066 catttcactcacacagt 36919050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 4741262 - 4741424
Alignment:
Q  338 taactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaacc 437  Q
    |||| |||||||| |||||||||||||||||||||  |||| |||||  |||||| ||| ||||||||||| || ||||||| |||||||||||||||||    
T  4741262 taacagggatataagtacccaccccgaacccatacaaaaacccgttccgaatgtataaa-tcaatttattatccattttatataaatagaaactcaaacc 4741360  T
Q  438 ctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 501  Q
    ||||| | || | |||||||| ||| | ||| ||||| ||| ||||||||||||| ||| ||||    
T  4741361 ctaaatcgttcctctcacacaatcatagtctcaatttctcagatgacactcacttctcaaagtt 4741424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 347 - 518
Target Start/End: Original strand, 21714030 - 21714201
Alignment:
Q  347 tataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccat 446  Q
    |||| ||||||||||  ||| |||||| ||||||||   ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |||    
T  21714030 tatatgtacccaccctaaactcatacctaaactcgtctcaaatgtagaaaattaatttattacctcttttatataaatagaaactcaaaccctaaatcat 21714129  T
Q  447 ttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctttc 518  Q
    ||| || ||||| | | | ||| | | | ||| ||||||||||||| |||||||| |||| |||||| ||||    
T  21714130 ttcacttacacaattagagtctcagtctctcaaatgacactcacttctcatagttctctcttttctcttttc 21714201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 265 - 454
Target Start/End: Original strand, 25298806 - 25298994
Alignment:
Q  265 caatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccga 364  Q
    |||||||||||||||    | |||| ||||||||||||||||  | ||||| ||||||||||||||  |   ||||  ||||||||| |  |||||||||    
T  25298806 caatttgacggatttttcccactttgactgggtttgggtttttccggatttcaaaacacgggtacgggatgggtaatggggatatagctgtccaccccga 25298905  T
Q  365 acccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctca 454  Q
    |||||||||||||| ||| | |||||| |||||||||||||| ||||||||| || |||||| ||||||||| ||||| |||||| ||||    
T  25298906 acccatacccaaacccgtaccaaatgttgaaaatcaatttatcaccccttttttataaatag-aactcaaactctaaatcatttcactca 25298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 312 - 516
Target Start/End: Original strand, 12075651 - 12075855
Alignment:
Q  312 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 411  Q
    |||| ||||||||||||||  ||| ||||  |||| ||| ||||||||||| ||| | ||| ||||||||| |  |||||||||||||||||||||||||    
T  12075651 atttcaaaacacgggtacgtgacaggtaatagggagatatgtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattaccc 12075750  T
Q  412 cttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttc 511  Q
     ||||||| ||||||||||| |||| || || |||||| | |||||||| | | | | | ||||| | ||||||  ||||||| |||||| |||| ||||    
T  12075751 attttatataaatagaaactaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttc 12075850  T
Q  512 tcctt 516  Q
    |||||    
T  12075851 tcctt 12075855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 293 - 449
Target Start/End: Original strand, 35304517 - 35304673
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttcta-aatgt 391  Q
    |||||||||||||||||| |||||||||||   |||||  ||  ||||| |||||||||||||| ||||| ||| ||||||||||||| |   | |||||    
T  35304517 tgggtttgggttttctctaattttaaaacataagtacgggacgggtaacggggatataggtacctaccccaaactcatacccaaactcatcaaagaatgt 35304616  T
Q  392 agaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 449  Q
    || |||||||||||||| |||||||||| ||| |||||||||||| ||||| ||||||    
T  35304617 aggaaatcaatttatta-cccttttatataaaaagaaactcaaactctaaatcatttc 35304673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 293 - 380
Target Start/End: Original strand, 14605926 - 14606013
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 380  Q
    ||||||||||||||||| ||||| |||| |||||||||| ||  ||||| |||||||| |||||||||||||||||||||||||||||    
T  14605926 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactc 14606013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 310 - 516
Target Start/End: Complemental strand, 37926636 - 37926432
Alignment:
Q  310 tgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattac 409  Q
    ||||||||||||| |||||| | ||||||||| |||||||| ||||||   | |||||||||||||||||| | || ||||||| |||| |||||||||     
T  37926636 tgattttaaaacatgggtaccagacaagtaacagggatataagtacccggtctgaacccatacccaaactcatcctgaatgtagtaaattaatttattat 37926537  T
Q  410 cccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatt 509  Q
    |||||| |||  ||| |||||||||||  |||| |||||  |||||||||| | | ||| | | |||   |||||| ||||||||||||||| |||  ||    
T  37926536 ccctttcatatcaattgaaactcaaactttaaatcatttaactcacacagttaaagtctcagtcttt--gatgacagtcacttatcatagttctctattt 37926439  T
Q  510 tctcctt 516  Q
    |||||||    
T  37926438 tctcctt 37926432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 390 - 501
Target Start/End: Complemental strand, 39086152 - 39086042
Alignment:
Q  390 gtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactca 489  Q
    |||||||||||||||| ||||  ||||||| ||||||||||| |||||||||| |||||| |||||||||||| | ||| | ||||||| |||||||| |    
T  39086152 gtagaaaatcaatttactacct-ttttatataaatagaaacttaaaccctaaatcatttcactcacacagtcagactctcagtttttcagatgacactta 39086054  T
Q  490 cttatcatagtt 501  Q
    ||||||||||||    
T  39086053 cttatcatagtt 39086042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 346 - 516
Target Start/End: Original strand, 9280943 - 9281113
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacca 445  Q
    ||||||||||||||||||||| ||||| |||||| || || ||| |||||||| ||||||||| |||||||||| | ||||||| |||||||||||| ||    
T  9280943 atataggtacccaccccgaactcatactcaaacttgtcctgaatatagaaaataaatttattatcccttttatatagatagaaattcaaaccctaaatca 9281042  T
Q  446 tttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
    || |  | ||| | | | | ||| ||| ||||| || ||| ||||||||||||||  |||| |||||||||    
T  9281043 ttacattgacaaaattagagtctcaatctttcagataacattcacttatcatagtactctcttttctcctt 9281113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 462
Target Start/End: Original strand, 9929219 - 9929337
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    ||||||||||||||||||||||| | |||||||| |||| || || ||||||||||||||||||||| |||  ||| ||||| ||||| |||| |||||     
T  9929219 ggatataggtacccaccccgaactcttacccaaaatcgtcctgaaagtagaaaatcaatttattacctcttccatataaatataaactgaaactctaaat 9929318  T
Q  444 catttcgctcacacagtca 462  Q
     ||||| ||||||||||||    
T  9929319 aatttcactcacacagtca 9929337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 344 - 449
Target Start/End: Complemental strand, 16575155 - 16575050
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    ||||||| |||||||| ||||||| ||||||||||||||  |||||||| ||||| |||||||||||| ||| ||| ||||||||||||||| | ||||     
T  16575155 ggatataagtacccactccgaacctatacccaaactcgtcttaaatgtaaaaaattaatttattacccttttaatataaatagaaactcaaatcataaat 16575056  T
Q  444 catttc 449  Q
    ||||||    
T  16575055 catttc 16575050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 387 - 516
Target Start/End: Original strand, 25265242 - 25265370
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 486  Q
    |||||||||||||||||||||| || || |||| |||||||||||||||  ||||| |||||  |||||||| ||| | ||| ||||||||| ||||||     
T  25265242 aatgtagaaaatcaatttattatcc-ttctatataaatagaaactcaaattctaaatcattttactcacacaatcagagtctcaatttttcagatgacag 25265340  T
Q  487 tcacttatcatagttatctcatttctcctt 516  Q
    || |||||||||||| |||| |||||||||    
T  25265341 tcgcttatcatagttctctcttttctcctt 25265370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 36306875 - 36306743
Alignment:
Q  297 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 396  Q
    ||||| ||||||| ||||| |||||||||||| || ||   |||| |||||||||||||| | |||||| | | || ||||| ||| |  ||||||||||    
T  36306875 tttggattttctccgatttcaaaacacgggtatgagacggttaacggggatataggtacctaacccgaagctacactcaaacccgtcccgaatgtagaaa 36306776  T
Q  397 atcaatttattaccccttttatagaaatagaaa 429  Q
    ||||||||||||||||||||||| |||||||||    
T  36306775 atcaatttattaccccttttatataaatagaaa 36306743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 378
Target Start/End: Complemental strand, 29527956 - 29527821
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 342  Q
    |||||||||||||||||||   | ||||||||| ||| |  |||||| |  |||||||||||||| | ||||| |||| |||||||||  ||  |||||     
T  29527956 gggtacccgcccaaaccaacttcgatttgacgggttttccccgctttgatagggtttgggttttccccgatttcaaaatacgggtacgtgacgggtaacg 29527857  T
Q  343 gggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||| |||||||||||||||||||||||||||    
T  29527856 gggatatatgtacccaccccgaacccatacccaaac 29527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 378
Target Start/End: Original strand, 30266281 - 30266416
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 342  Q
    ||||||||||||||||||| ||| ||||||||| ||| || || ||| ||||||||||| |||| || ||||| | || ||||||||   ||  |||||     
T  30266281 gggtacccgcccaaaccaaccccgatttgacgggttttctccgatttgactgggtttggtttttttccgatttcataatacgggtacaggacgggtaacg 30266380  T
Q  343 gggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||| ||| |||||||||||||||||||||||    
T  30266381 gggatatatgtatccaccccgaacccatacccaaac 30266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 378
Target Start/End: Complemental strand, 30285907 - 30285772
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 342  Q
    ||||||||||||||||||| ||| ||||||||| ||| || || ||| ||||||||||| |||| || ||||| | || ||||||||   ||  |||||     
T  30285907 gggtacccgcccaaaccaaccccgatttgacgggttttctccgatttgactgggtttggtttttttccgatttcataatacgggtacaggacgggtaacg 30285808  T
Q  343 gggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||| ||| |||||||||||||||||||||||    
T  30285807 gggatatatgtatccaccccgaacccatacccaaac 30285772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 457
Target Start/End: Complemental strand, 37384357 - 37384203
Alignment:
Q  302 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaa 401  Q
    ||||||||  |||||||||||||||||||  ||| | |||  |||||||   | ||||||| ||||||||| ||||| ||| | |||| |||||| ||||    
T  37384357 gttttctccaattttaaaacacgggtacgtgacatgcaacgaggatatattcatccaccccaaacccatacacaaacccgtcccaaatatagaaa-tcaa 37384259  T
Q  402 tttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacac 457  Q
    ||||||| |||||||||| ||||||||  |||||||||||| |||||| |||||||    
T  37384258 tttattatcccttttatataaatagaagttcaaaccctaaatcatttcactcacac 37384203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 516
Target Start/End: Original strand, 17113098 - 17113226
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 486  Q
    ||||||||||||||||||||||| | ||| ||| ||||| |||| |||| | |||| |||||| ||| || ||||| | ||| | | ||||| |||||||    
T  17113098 aatgtagaaaatcaatttattactc-tttcatataaataaaaacccaaatcttaaatcatttcactcccaaagtcagagtctcagtctttcagatgacac 17113196  T
Q  487 tcacttatcatagttatctcatttctcctt 516  Q
    |||||||||||||||||||| ||| |||||    
T  17113197 tcacttatcatagttatctcttttttcctt 17113226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 296 - 405
Target Start/End: Original strand, 19883060 - 19883169
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||||| | ||||||||||||||| ||||  |   ||||| |||||||||||| |||||||||||| |||| ||||||||| |  |||||| ||    
T  19883060 gtttgggttttccccgattttaaaacacggatacgggaagggtaacggggatataggtatccaccccgaaccgatacacaaactcgtcccgaatgtataa 19883159  T
Q  396 aatcaattta 405  Q
    ||||||||||    
T  19883160 aatcaattta 19883169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 492
Target Start/End: Complemental strand, 3505343 - 3505163
Alignment:
Q  312 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 411  Q
    ||||||||| | |||||||||||  || || ||||||||||||| ||||| |||   |||| |||||  ||||   || ||||||||||||||||||| |    
T  3505343 attttaaaatatgggtacgaaacgggttacggggatataggtactcaccctgaatatatacacaaacctgttccgcatatagaaaatcaatttattactc 3505244  T
Q  412 cttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactt 492  Q
    |||||||  ||||||||| |||||| ||| | ||||||  |||||| || | | ||| ||| | |||||||||||||||||    
T  3505243 cttttatctaaatagaaattcaaactctagatcatttcattcacaccgttagagtctcaatctctcatatgacactcactt 3505163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 6382273 - 6382377
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||||| ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  6382273 tgggtatgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 6382372  T
Q  393 gaaaa 397  Q
     ||||    
T  6382373 aaaaa 6382377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 31782709 - 31782622
Alignment:
Q  291 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||||| | ||||| |||| |||||||||  ||| ||||| |||||||| ||||||||||| ||| |||||||||||    
T  31782709 actgggtttgggttttccccgatttcaaaatacgggtacggtacaggtaacggggatatatgtacccaccccaaactcatacccaaac 31782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 460
Target Start/End: Original strand, 7334260 - 7334351
Alignment:
Q  367 ccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagt 460  Q
    ||||| |||||||||| | |||||| |||||||||||||||| |  |||||||  ||||||||||||||| ||||| |||||| ||||||||||    
T  7334260 ccatatccaaactcgtcccaaatgttgaaaatcaatttattatcgtttttata--aatagaaactcaaactctaaatcatttcactcacacagt 7334351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 12505581 - 12505687
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||||||  |||||||||| |||| ||||||||||| ||| || || ||| || ||||||||||| ||||||||||| ||||||||||| ||||  ||||    
T  12505581 gggatattagtacccaccctgaactcatacccaaacccgtcctgaaggtaaaacatcaatttatttccccttttatataaatagaaacttaaacattaaa 12505680  T
Q  443 ccatttc 449  Q
     ||||||    
T  12505681 tcatttc 12505687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 516
Target Start/End: Complemental strand, 30034667 - 30034545
Alignment:
Q  394 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactta 493  Q
    |||||||||||| |||| | |||||| |||||||||| ||||||||||| |||||| |||| | ||| | | ||  ||| |||||  |||||||| ||||    
T  30034667 aaaatcaatttactacctcatttatataaatagaaacccaaaccctaaatcatttcactcataaagtgagagtcacaatctttcaagtgacactcgctta 30034568  T
Q  494 tcatagttatctcatttctcctt 516  Q
    |||||||| |||| |||||||||    
T  30034567 tcatagttttctcttttctcctt 30034545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 392
Target Start/End: Complemental strand, 32585633 - 32585484
Alignment:
Q  249 ccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt------tttctctgattttaaaacacgggtacgaaacaagtaact 342  Q
    ||||||||||||| ||||||||||| | ||| |  |  ||| |||||||||||||      |||||| ||||| |||||||||||| |  ||| |||||     
T  32585633 ccgcccaaaccaaacccaatttgaccggttttcccctttttgactgggtttgggtatgaattttctccgatttcaaaacacgggtatgggacaggtaacg 32585534  T
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    || |||||||||||||||| |||||||||||||||| ||| | |||||||    
T  32585533 ggtatataggtacccaccctgaacccatacccaaacccgtcccaaatgta 32585484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 31752550 - 31752445
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||||| |||||||||||| || || ||||||  | |||||||| ||||||||||||||||||||| || ||| | |||||||    
T  31752550 tgggtatgggttttccccgatttcaaaacacgggtatgagacgagtaacgagtatataggttcccaccccgaacccatacccatacccgtcccaaatgta 31752451  T
Q  393 gaaaat 398  Q
     |||||    
T  31752450 aaaaat 31752445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 449
Target Start/End: Original strand, 43351419 - 43351532
Alignment:
Q  336 agtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaa 435  Q
    |||||| | ||||||| |||| |||||||||||||| ||||| || |   ||||||  ||||||||||||||||| |||||| | ||||| |||||||||    
T  43351419 agtaacagagatatagatacctaccccgaacccatatccaaattcatctcaaatgtgaaaaatcaatttattacctcttttacataaataaaaactcaaa 43351518  T
Q  436 ccctaaaccatttc 449  Q
    |||| || ||||||    
T  43351519 ccctgaatcatttc 43351532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 378
Target Start/End: Original strand, 10574370 - 10574505
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 342  Q
    ||||||||||||||| ||||||| ||||||||| ||| |  || ||| ||||||||||  ||||| | ||||| | || || ||||||  ||  |||||     
T  10574370 gggtacccgcccaaatcaatcccgatttgacgggttttccccgatttgactgggtttgaattttccccgatttcataatacaggtacgggacgggtaacg 10574469  T
Q  343 gggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||| |||||| |||||||| |||||||||||    
T  10574470 gggatatatgtacccgccccgaactcatacccaaac 10574505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 293 - 430
Target Start/End: Complemental strand, 10302178 - 10302040
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||||| ||||||| | ||||| |||  ||||||| || ||  ||||| ||| |||| |||||||||||||||||||||||| |  ||| | |||||||    
T  10302178 tgggtttaggttttccccgatttcaaagtacgggtatgagacgggtaacggggttatatgtacccaccccgaacccatacccatatccgtcccaaatgta 10302079  T
Q  393 gaaaatcaatttattacc-ccttttatagaaatagaaac 430  Q
     ||||| | ||| ||||| ||||||||| ||||||||||    
T  10302078 aaaaattacttttttaccaccttttatataaatagaaac 10302040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 1724311 - 1724396
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||| | ||||| |||||| ||||| |  ||  ||||| |  |||||||||||||||||||||||||||||||||    
T  1724311 tgggtttgggttttccccgatttcaaaacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaac 1724396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 6482036 - 6482121
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||| |  |||| |||||||||||| |  || |||||  || ||||| |||||||||||||||||||||||||||    
T  6482036 tgggtttgggttttccccaatttaaaaacacgggtatgggacgagtaaagggtatatatgtacccaccccgaacccatacccaaac 6482121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 21544673 - 21544588
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||| ||||  | ||||| |||| |||||||||  ||| ||||  |||||||| |||||||||||||||||||||||||||    
T  21544673 tgggtttggatttttcccgatttcaaaatacgggtacgggacaggtaatggggatatatgtacccaccccgaacccatacccaaac 21544588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 40420680 - 40420741
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccattt 448  Q
    |||||||||||||| |||||||||||||||||| ||||||||||  |||||| ||| |||||    
T  40420680 aatgtagaaaatcactttattaccccttttatataaatagaaaccaaaaccccaaatcattt 40420741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 47550398 - 47550459
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  47550398 gtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 47550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 449
Target Start/End: Complemental strand, 55783543 - 55783442
Alignment:
Q  348 ataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatt 447  Q
    ||||||||  || ||||||||||||  ||||| || | |||| |||||||||| || |||||| ||||||||  |||||||||||||| |||||| ||||    
T  55783543 ataggtacgtactccgaacccatacttaaacttgtcccaaatatagaaaatcacttcattacctcttttatatgaatagaaactcaaatcctaaatcatt 55783444  T
Q  448 tc 449  Q
    ||    
T  55783443 tc 55783442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 449
Target Start/End: Complemental strand, 55847725 - 55847624
Alignment:
Q  348 ataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatt 447  Q
    ||||||||  || ||||||||||||  ||||| || | |||| |||||||||| || |||||| ||||||||  |||||||||||||| |||||| ||||    
T  55847725 ataggtacgtactccgaacccatacttaaacttgtcccaaatatagaaaatcacttcattacctcttttatatgaatagaaactcaaatcctaaatcatt 55847626  T
Q  448 tc 449  Q
    ||    
T  55847625 tc 55847624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 5902659 - 5902719
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  5902659 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 5902719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 7609020 - 7608960
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  7609020 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 7608960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 11122870 - 11122974
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||||| ||| |  ||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  11122870 tgggtatgggttttctccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgta 11122969  T
Q  393 gaaaa 397  Q
     ||||    
T  11122970 aaaaa 11122974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 44317585 - 44317525
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  44317585 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 44317525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 375
Target Start/End: Complemental strand, 48459569 - 48459493
Alignment:
Q  299 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    ||||||||| | ||||| |||||| ||||| | |||  ||||| || ||||||||||||||||||||||||||||||    
T  48459569 tgggttttccccgatttcaaaacatgggtatggaacgggtaacaggtatataggtacccaccccgaacccataccca 48459493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 43553477 - 43553414
Alignment:
Q  356 ccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata 419  Q
    ||||||||||| |||| | |||||||| |  ||||| |||||||||||||||||||||||||||    
T  43553477 ccaccccgaactcatatcgaaactcgtcccgaatgttgaaaatcaatttattaccccttttata 43553414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 356
Target Start/End: Complemental strand, 3516402 - 3516348
Alignment:
Q  302 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacc 356  Q
    |||||||| ||||| |||||||||||||||||| |||||| | ||||||||||||    
T  3516402 gttttctccgatttcaaaacacgggtacgaaacgagtaacagtgatataggtacc 3516348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 513
Target Start/End: Original strand, 23927693 - 23927859
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    ||||||||||| ||||||||||||| |||||||||||  |||  |  |||||||| ||||||||||| ||||  || ||||  |||  |||||| ||||     
T  23927693 ggatataggtatccaccccgaacccctacccaaactc-atctcgaattagaaaattaatttattacctctttattataaat--aaatccaaaccataaat 23927789  T
Q  444 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctc 513  Q
     ||||| |||||||| | | ||||| ||||||||  |||||| ||||||| |||| || |||| ||||||    
T  23927790 aatttcactcacacacttagaatctcaatttttcggatgacaatcacttaacataattctctcttttctc 23927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 11028167 - 11028082
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||| |||||||||||    
T  11028167 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaactcatacccaaac 11028082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 15987263 - 15987348
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| || |||||| | |||||||||||||||||| |  |   ||||| || |||||| ||||||||||||||||||||||||||    
T  15987263 tgggtatgagttttcccagattttaaaacacgggtatgggatgggtaacgggtatatagatacccaccccgaacccatacccaaac 15987348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 47103832 - 47103747
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||| |  |||| |||| |||||||||   |  |||||  ||||||| |||||||||||||||||||||||||||    
T  47103832 tgggtttgggttttccccaatttcaaaatacgggtacggggcgggtaacgcggatatatgtacccaccccgaacccatacccaaac 47103747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 53906350 - 53906411
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || |||||||||||||||||||||||||| | |||||||| | ||||||| |||||    
T  53906350 gtaacaggtatataggtacccaccccgaacccatatctaaactcgtcccaaatgtaaaaaat 53906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 26564881 - 26564821
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || |||||||||||||||||||| |||||||||||| ||| | ||||| ||||||    
T  26564881 gtaacgggtatataggtacccaccccgaaaccatacccaaacccgtcccaaatgcagaaaa 26564821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 50376425 - 50376501
Alignment:
Q  366 cccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||| |||| ||| |||||  |||||||||||||||||||||  || ||||||| ||||||||||| |||| |||||    
T  50376425 cccacacccgaacccgttccgaatgtagaaaatcaatttattttccattttatataaatagaaactaaaacgctaaa 50376501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 55826668 - 55826728
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || |||||||||||||||||||||||||| |||||| ||| | ||||||| ||||    
T  55826668 gtaacgggtatataggtacccaccccgaacccatatccaaacccgtcccaaatgtaaaaaa 55826728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 378
Target Start/End: Complemental strand, 568461 - 568426
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||| |||||||||||||||||||||||||||    
T  568461 gggatatatgtacccaccccgaacccatacccaaac 568426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 3514176 - 3514105
Alignment:
Q  352 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaa 423  Q
    |||||||||| |||| ||||| ||||| ||| |  ||| ||||||||||| ||||||| |||||||||||||    
T  3514176 gtacccaccctgaacacatacacaaacccgtccagaatatagaaaatcaaattattactccttttatagaaa 3514105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 21423930 - 21423851
Alignment:
Q  318 aaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||||||||| || ||  ||||| || ||||||||||||||||| ||||||||| ||||| ||| | ||||||| ||||    
T  21423930 aaacacgggtatgagacgggtaacgggtatataggtacccaccccaaacccatacacaaacccgtcccaaatgtaaaaaa 21423851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 31918584 - 31918663
Alignment:
Q  318 aaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||||||||| |  || |||||  || |||||| |||||||||||||||||||||||||| ||| | ||||||| ||||    
T  31918584 aaacacgggtatgggacgagtaatgggtatatagttacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 31918663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 45065325 - 45065258
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| |||| |||||||||  || |||||| |||||||| ||||||| ||||||| |||||||||||    
T  45065325 gatttcaaaatacgggtacgggacgagtaacagggatatatgtacccatcccgaacgcatacccaaac 45065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 375
Target Start/End: Original strand, 47239386 - 47239468
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    ||||| ||| |||| || |||||||||||||||||| |  ||  ||||| || |||||||| ||||||| |||||||||||||    
T  47239386 tgggtatggattttttccgattttaaaacacgggtatgggacgggtaacgggtatataggttcccaccctgaacccataccca 47239468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 380
Target Start/End: Original strand, 1866568 - 1866637
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 380  Q
    ||||| |||| |||||||||| ||  ||||   ||||||| ||| |||||||||||||||||||||||||    
T  1866568 gatttcaaaatacgggtacgagacgggtaatgcggatatatgtatccaccccgaacccatacccaaactc 1866637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 26564984 - 26564927
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 303  Q
    ||||| ||| ||||||  |||||||||||||||| ||||| ||| |||||||||||||    
T  26564984 tacccacccgaaccaaatccaatttgacggattttcttcgttttgactgggtttgggt 26564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 39047046 - 39046941
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| |  ||||  ||||||||||| |  ||| ||||| || |||||||||||||| || |||||||||||| || ||| | |||||||    
T  39047046 tgggtatgggttttccccaatttccaaacacgggtatgggacatgtaacgggtatataggtacccactccaaacccatacccatacccgtcccaaatgta 39046947  T
Q  393 gaaaat 398  Q
     |||||    
T  39046946 aaaaat 39046941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 48027749 - 48027818
Alignment:
Q  77 agacttttactactccatgaattaattttcttccatatcttatccttgataaagctaaaagtggtttttt 146  Q
    |||||||||||||||||| |||| || |||||||| ||  |||| || |||||||| ||||||| |||||    
T  48027749 agacttttactactccataaatttatcttcttccaaattctatctttaataaagctgaaagtggattttt 48027818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 419
Target Start/End: Complemental strand, 54270640 - 54270584
Alignment:
Q  363 gaacccatacccaaactcgttcta-aatgtagaaaatcaatttattaccccttttata 419  Q
    |||||||||  ||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  54270640 gaacccatattcaaactc-ttctagaatgtagaaaatcaatttattacctcttttata 54270584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 4237346 - 4237410
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 408  Q
    |||||||||||||||| |  ||| ||||| ||||||| ||  ||||||||||||| |||||||||    
T  4237346 ggatataggtacccacgcgaaacacatactcaaactcatttcaaatgtagaaaattaatttatta 4237410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 28695196 - 28695232
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgt 382  Q
    |||||||||| |||||||||| |||||||||||||||    
T  28695196 atataggtactcaccccgaactcatacccaaactcgt 28695232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 242 - 516
Target Start/End: Complemental strand, 9402727 - 9402454
Alignment:
Q  242 cgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaac 341  Q
    ||||||||||||| |||||| |||||||||| |||||| |  |||||| ||||| ||||||||||| | ||||| |||||| ||||||   ||  |||||    
T  9402727 cgggtacccgcccgaaccaaacccaatttgatggattttccccgctttgactggatttgggttttccccgatttcaaaacatgggtacaggacgggtaac 9402628  T
Q  342 tgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaa 441  Q
      ||||||||||  |||||| |||||||||| |||||  ||    ||||||||||||||||||| |||||| |||||| |||||||||| ||||||||||    
T  9402627 atggatataggtgtccaccc-gaacccatactcaaacctgtctcgaatgtagaaaatcaatttagtaccccatttatataaatagaaacccaaaccctaa 9402529  T
Q  442 accatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
    | |||||| |||||||||||| | |||   | |||||||| ||||||||||||||||||| |||| |||||||||    
T  9402528 atcatttcactcacacagtcagagtctaggtctttcatatcacactcacttatcatagttctctcttttctcctt 9402454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 252 - 505
Target Start/End: Original strand, 8320754 - 8321007
Alignment:
Q  252 cccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatatag 351  Q
    ||||||||||||  |||||||||||||| |  |||||| ||| ||||||||||||| |  |||| |||||||||||||| |||| ||||| |||||||||    
T  8320754 cccaaaccaatcttaatttgacggattttccccgctttgactaggtttgggttttccccaatttcaaaacacgggtacggaacaggtaacagggatatag 8320853  T
Q  352 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgc 451  Q
     || | |||||||||||||||||| || |||||| |||| | |||||||| ||||||| || ||||   ||||||||||| |||||||||| |||||| |    
T  8320854 atatcgaccccgaacccatacccagacccgttctgaatgcaaaaaatcaacttattactccatttacgtaaatagaaacttaaaccctaaatcatttcac 8320953  T
Q  452 tcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatct 505  Q
    | ||||||||| | |||   | ||||| | |||| |||||||||||||||||||    
T  8320954 ttacacagtcagagtctcggtctttcagacgacattcacttatcatagttatct 8321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 239 - 442
Target Start/End: Complemental strand, 32960002 - 32959800
Alignment:
Q  239 atgcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagt 338  Q
    |||||||||||| ||| || ||| || |||||||||||||| | ||| ||| | ||||||||||||||| || |||| |||||||||||||| |||  ||    
T  32960002 atgcgggtacccacccgaatcaaacctaatttgacggattttcctcgttttgattgggtttgggttttccctaatttcaaaacacgggtacggaacgggt 32959903  T
Q  339 aactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccc 438  Q
    ||| |||||||||||| |||||||||||||||| |||||  |||  ||||||||||||||||||||||||||||| ||||| ||  || ||| |||||||    
T  32959902 aacggggatataggtatccaccccgaacccata-ccaaatccgtcataaatgtagaaaatcaatttattacccctattatataagcagtaacccaaaccc 32959804  T
Q  439 taaa 442  Q
    ||||    
T  32959803 taaa 32959800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 346 - 506
Target Start/End: Complemental strand, 13769107 - 13768947
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacca 445  Q
    |||||||||||||||| ||||||||| |||||| ||| || ||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||  |    
T  13769107 atataggtacccacccagaacccatatccaaacccgtcctgaatgtagaaaatcaatttattactccttttatataaattgaaactcaaaccataaatta 13769008  T
Q  446 tttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctc 506  Q
    ||||  | ||||||||| | |||  || | ||||||||||||||||| ||| |||| ||||    
T  13769007 tttcagtaacacagtcagattctccatctctcatatgacactcacttctcagagttctctc 13768947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 296 - 516
Target Start/End: Complemental strand, 20349149 - 20348930
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||| ||||| | ||||| |||||||||||| |  || |||||| |||||||||||||||||||||||| ||||||||||  ||||  ||||||| ||    
T  20349149 gtttggattttccccgatttcaaaacacgggtatgggacgagtaacggggatataggtacccaccccgaactcatacccaaatccgttgcaaatgtaaaa 20349050  T
Q  396 aatcaatttattaccccttttata-gaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttat 494  Q
    ||| |||||||||| | |||||||  ||||| |||||||||||||||| || ||| |||||||  ||| | |||     ||||| |||||||| ||||||    
T  20349049 aattaatttattacactttttatataaaatataaactcaaaccctaaatcacttcactcacac--tcagagtcttggactttcagatgacacttacttat 20348952  T
Q  495 catagttatctcatttctcctt 516  Q
    ||||||| |||| |||||||||    
T  20348951 catagttctctcttttctcctt 20348930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 342 - 518
Target Start/End: Original strand, 1947840 - 1948016
Alignment:
Q  342 tgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaa 441  Q
    ||||||||| |||| || | | ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||    
T  1947840 tgggatatatgtactcatctcaaacccatactcaaactcgttccaaatgtagaaaatcaatttattaccccttttatataaataaaaatccaaaccctaa 1947939  T
Q  442 accatttcgctcacacagtcaca--atctgaatttttcatatgacactcacttatcatagttatctcatttctcctttc 518  Q
      ||||   |||||||||||| |  ||||||   ||||| ||||||||||||||||||||||  ||| ||||| |||||    
T  1947940 gtcattatactcacacagtcagagtatctga--ctttcagatgacactcacttatcatagttccctcttttctactttc 1948016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 296 - 442
Target Start/End: Original strand, 256495 - 256642
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    ||||| |||||| | ||||| |||||| |||||||| ||  ||||  || ||||||||||||||||| ||||||||||||||| | | ||||||||||||    
T  256495 gtttgagttttccccgatttcaaaacatgggtacgagacgggtaatgggcatataggtacccaccccaaacccatacccaaacccctcctaaatgtagaa 256594  T
Q  396 aatcaatttattacccctttta-tagaaatagaaactcaaaccctaaa 442  Q
    |||||||||| ||||||||||| |  |||||||||| ||||| |||||    
T  256595 aatcaatttactaccccttttatttaaaatagaaacacaaactctaaa 256642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 501
Target Start/End: Original strand, 34346023 - 34346222
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 410  Q
    |||||||||| |||||| || | | |||||| ||||||||||||||||||||||| | |||||||||  |||||  |||||||||||| ||||||||||     
T  34346023 gattttaaaatacgggttcggagcgagtaacggggatataggtacccaccccgaatctatacccaaatccgttccgaatgtagaaaattaatttattact 34346122  T
Q  411 cctt---------ttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 501  Q
    ||||         ||||| |||||||||| ||||||||||| |||||| |||||||||||| | ||| | | ||| | |||| | |||||||||||||||    
T  34346123 ccttttatataaattatataaatagaaacccaaaccctaaatcatttcactcacacagtcagagtctcagtcttttagatgagagtcacttatcatagtt 34346222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 244 - 380
Target Start/End: Original strand, 29199836 - 29199972
Alignment:
Q  244 ggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactg 343  Q
    |||||||||||||||||| ||| ||||||||||||| |  || ||| | ||||||||| ||||| | ||||| |||| |||||||||  ||  ||||| |    
T  29199836 ggtacccgcccaaaccaaccccgatttgacggattttccccgatttgattgggtttggattttccccgatttcaaaatacgggtacgggacgggtaacag 29199935  T
Q  344 ggatataggtacccaccccgaacccatacccaaactc 380  Q
    ||||||| ||| | |||||||||||||||||||||||    
T  29199936 ggatatatgtatctaccccgaacccatacccaaactc 29199972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 28079696 - 28079780
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 377  Q
    ||||||||||||||| | ||||| |||||| |||||||  ||  ||||| |||||||||||||||||||||||||||||||||||    
T  28079696 tgggtttgggttttccccgatttcaaaacatgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 458
Target Start/End: Original strand, 10925495 - 10925608
Alignment:
Q  345 gatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacc 444  Q
    |||||| ||| |||||||||||||||||| |||||| |||  |||||| ||||  |||||||||  ||||||||| |||||||| || |||||||||| |    
T  10925495 gatataagtatccaccccgaacccatacctaaactcattccgaatgtaaaaaaataatttattattccttttatataaatagaatctgaaaccctaaatc 10925594  T
Q  445 atttcgctcacaca 458  Q
    ||||| || |||||    
T  10925595 atttcactaacaca 10925608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 296 - 501
Target Start/End: Complemental strand, 29341341 - 29341131
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||||  | |||||| ||||| ||| | || ||  ||||| | |||||||||||||| ||| ||| ||||||||||| ||| |  |||||||||    
T  29341341 gtttgggtttttcccgattttcaaacatgggcatgagacgggtaacggagatataggtacccatcccaaactcatacccaaacccgtcccgaatgtagaa 29341242  T
Q  396 aatcaatttatt---acccctttt--atagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcac 490  Q
    ||||| ||| ||   ||||||| |  ||| |||||||||| ||||||||| | |||||| || | ||||||| | ||| ||| ||||| |||||| ||||    
T  29341241 aatcattttttttttaccccttatctatataaatagaaacccaaaccctatatcatttcacttatacagtcagattctcaatctttcagatgacaatcac 29341142  T
Q  491 ttatcatagtt 501  Q
    |||||||||||    
T  29341141 ttatcatagtt 29341131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 378
Target Start/End: Original strand, 14410809 - 14410940
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 345  Q
    |||||| |||||||||  | |||||||||||||| |  || ||| ||| |||||| |||||| | ||||| |||||||||||| |  ||  ||||| ||     
T  14410809 tacccgtccaaaccaaatctaatttgacggattttcc-cgttttgactaggtttgagttttcccagatttcaaaacacgggtatgggacgggtaacgggt 14410907  T
Q  346 atataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||||||||||||||||||||||||    
T  14410908 atataggtacccaccccgaacccatacccaaac 14410940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 12309660 - 12309555
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||| ||| ||||||| |||||||||||| | |||  ||||| || ||||| |||||||||||||||| |||||||||| ||| | |||||||    
T  12309660 tgggtatgggtattccctgatttcaaaacacgggtatggaacgggtaacaggtatatatgtacccaccccgaaccgatacccaaacccgtcccaaatgta 12309561  T
Q  393 gaaaat 398  Q
     |||||    
T  12309560 aaaaat 12309555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 32853932 - 32853827
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  32853932 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 32853833  T
Q  393 gaaaat 398  Q
     |||||    
T  32853832 aaaaat 32853827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 24602854 - 24602941
Alignment:
Q  291 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||||| | ||||| |||||| ||||| |  ||  ||||| || |||||| ||||||||||||||||||||||||||    
T  24602854 actgggtttgggttttcccagatttcaaaacatgggtatgtgacgggtaacaggtatatagatacccaccccgaacccatacccaaac 24602941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 34179102 - 34179164
Alignment:
Q  387 aatgtagaaaatcaatttattacccctttt-atagaaatagaaactcaaaccctaaaccattt 448  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||    
T  34179102 aatgttgaaaatcaatttattacctctttttatataaatagaaactcaaaccctaaatcattt 34179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 15498406 - 15498313
Alignment:
Q  299 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||||||| | ||||| |||||||||||| || ||| ||||  || ||||||||||||| |||||||||| |||||||| ||| | |||||||    
T  15498406 tgggttttccccgatttcaaaacacgggtatgagacaggtaatgggtatataggtacccatcccgaacccacacccaaacccgtcccaaatgta 15498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 27738860 - 27738755
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| |  ||||| ||||||||||||||||||||||||||| ||| | |||||||    
T  27738860 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacagatatatatgtacccaccccgaacccatacccaaacccgtcccaaatgta 27738761  T
Q  393 gaaaat 398  Q
     |||||    
T  27738760 aaaaat 27738755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 3483967 - 3484027
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  3483967 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 3484027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 5863383 - 5863487
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||| |||||||| ||||||||||||||||| ||| | |||||||    
T  5863383 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacctcgaacccatacccaaacccgtcccaaatgta 5863482  T
Q  393 gaaaa 397  Q
     ||||    
T  5863483 aaaaa 5863487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 398
Target Start/End: Complemental strand, 12141420 - 12141368
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  12141420 atataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 12141368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 455
Target Start/End: Complemental strand, 14321861 - 14321793
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcac 455  Q
    |||||||||||| |||||||||||  ||||||| ||||||||||||||| | |||| |||||| |||||    
T  14321861 aatgtagaaaattaatttattacctattttatataaatagaaactcaaatcttaaatcatttcactcac 14321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 2367414 - 2367329
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||| |||||||||||||||||||||||||||    
T  2367414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaac 2367329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 10142518 - 10142603
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| ||||||||| | ||| | |||| ||||||| |  ||| ||||| || ||||||||||||||||||||| |||||||||||    
T  10142518 tgggtatgggttttccccgatctcaaaaaacgggtatgggacaggtaacgggtatataggtacccaccccgaactcatacccaaac 10142603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 24225742 - 24225681
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || ||||||||||||||||||||||||| ||||||| ||| | ||||||| |||||    
T  24225742 gtaacgggtatataggtacccaccccgaacccatgcccaaacccgtcccaaatgtaaaaaat 24225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 362
Target Start/End: Original strand, 34178329 - 34178398
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccacccc 362  Q
    ||||| ||||||| | ||||||| ||||||||||||||| ||  |||||  |||||||||||||||||||    
T  34178329 tgggtatgggtttcccctgatttcaaaacacgggtacgagacgggtaacaaggatataggtacccacccc 34178398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 10188126 - 10188158
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||||||||||||||||||||||||    
T  10188126 atataggtacccaccccgaacccatacccaaac 10188158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 27534728 - 27534668
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || |||||||||||||||||||| |||||||||||| ||| | ||||||| ||||    
T  27534728 gtaacgggtatataggtacccaccccgaatccatacccaaacccgtcccaaatgtaaaaaa 27534668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 398
Target Start/End: Complemental strand, 32532622 - 32532523
Alignment:
Q  299 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||| | ||||| |||||||||||| |  ||  ||||  || ||||||||||||||||||||||||||| || || ||| | ||||||| |||||    
T  32532622 tgggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgtaaaaaat 32532523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 382
Target Start/End: Complemental strand, 14255045 - 14254957
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 382  Q
    |||||||| |||||||||||||| ||| |||||||| |  ||  ||||| |  |||||||||||||||  ||||||||||||||| ||||    
T  14255045 tgggtttgagttttctctgatttcaaa-cacgggtatgggacgtgtaacggaaatataggtacccaccatgaacccatacccaaattcgt 14254957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 380
Target Start/End: Original strand, 7393858 - 7393974
Alignment:
Q  264 ccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccg 363  Q
    |||||||||||||||| |  |  ||| | ||||||||| ||||| | ||||| |||||||| ||| || ||   |||  || ||||||||| ||||||||    
T  7393858 ccaatttgacggattttccccattttgattgggtttggattttccccgatttcaaaacacgagtaagagacggataatgggtatataggtatccaccccg 7393957  T
Q  364 aacccatacccaaactc 380  Q
    ||||||||| |||||||    
T  7393958 aacccatactcaaactc 7393974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 12678147 - 12678179
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||||||| ||||||||||||||||    
T  12678147 atataggtacccaccctgaacccatacccaaac 12678179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 32053132 - 32053072
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||| ||||||||||| ||||||||||||||| ||| | ||||||| ||||    
T  32053132 gtaacgggtatatatgtacccaccccaaacccatacccaaacccgtccaaaatgtaaaaaa 32053072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 296 - 516
Target Start/End: Original strand, 8545352 - 8545572
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||||||| ||||| |||||||||||| | ||| |||||| ||||||||| |||||||||||||||||||| ||||||||| | ||||||||||    
T  8545352 gtttgggttttctccgatttcaaaacacgggtatggaacgagtaacggggatatagatacccaccccgaacccatactcaaactcgtcccaaatgtagaa 8545451  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 495  Q
    ||||||||||  || ||||||||| ||| |||||  ||||||||||| |||||| |||| | || || | |||   | ||||| ||||||||||||||||    
T  8545452 aatcaatttacaactccttttatataaacagaaatccaaaccctaaatcatttcactcaaatagccagagtctcggtctttcaaatgacactcacttatc 8545551  T
Q  496 atagttatctcatttctcctt 516  Q
    ||| || |||| |||||||||    
T  8545552 ataattctctcttttctcctt 8545572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 344 - 516
Target Start/End: Complemental strand, 28345528 - 28345356
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    ||||||||| |||||||||||||||||||||||||| || || |||||||||||| ||| |||||||||||||||| ||||||||||  |||  |||||     
T  28345528 ggatataggcacccaccccgaacccatacccaaacttgtcctgaatgtagaaaataaatatattaccccttttatataaatagaaaccgaaattctaaat 28345429  T
Q  444 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
    |||||| |||||||||||| | ||| | | ||||| |||||||||||||||||||||| |||| | |||||||    
T  28345428 catttcactcacacagtcatagtctcagtatttcagatgacactcacttatcatagttctctcttatctcctt 28345356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 345 - 501
Target Start/End: Complemental strand, 29918643 - 29918487
Alignment:
Q  345 gatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacc 444  Q
    |||||| |||||||||||||| |||||| ||||| ||| | ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  29918643 gatatatgtacccaccccgaaaccatacacaaacccgtcccaaatgtaaaaaatcaatttattacctcttttatataaatagaaactcaaaccctaaatc 29918544  T
Q  445 atttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 501  Q
    ||||| |||||||||| | | ||| ||| ||||| |||||||| | |||||||||||    
T  29918543 atttcactcacacagttagagtctcaatctttcagatgacacttagttatcatagtt 29918487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 297 - 516
Target Start/End: Original strand, 17084111 - 17084332
Alignment:
Q  297 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt--aga 394  Q
    ||||||||||||| ||||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||| |||| |||||| | |    |||||  | |    
T  17084111 tttgggttttctccgattttaaaacacgggtacgagacgggtaacggggatatagatacccaccccgaactcatatccaaacccatcacgaatgtaaaaa 17084210  T
Q  395 aaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttat 494  Q
    |||||||||||||  || ||||||| ||||| |||| ||| |||||||  ||| | |||||||| ||| | | | | | |||||||||||| ||||||||    
T  17084211 aaatcaatttattgtcctttttatataaatataaacccaagccctaaattattcccctcacacaatcagagtttcagtctttcatatgacaatcacttat 17084310  T
Q  495 catagttatctcatttctcctt 516  Q
    |||||||||||| |||||||||    
T  17084311 catagttatctcttttctcctt 17084332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 296 - 514
Target Start/End: Complemental strand, 30904130 - 30903911
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||| ||| ||||| ||||||||||||||| ||  ||||  | |||||| |||||||||||  |||||||||||||   || |  |||||||||    
T  30904130 gtttgggtttcctc-gatttcaaaacacgggtacgagacgggtaatggagatataagtacccaccccatacccatacccaaatcagtcccgaatgtagaa 30904032  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaa-tctgaa-tttttcatatgacactcactta 493  Q
    |||||||||||||| | ||||||| ||||||||||  ||||| |||| |||||| |||||||||||| || ||| || ||||||| |||||| ||| |||    
T  30904031 aatcaatttattacacattttatataaatagaaaccaaaaccttaaatcatttcactcacacagtcaaaagtctcaattttttcaaatgacattcattta 30903932  T
Q  494 tcatagttatctcatttctcc 514  Q
    |||||||| |||| |||||||    
T  30903931 tcatagttttctcttttctcc 30903911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 311 - 516
Target Start/End: Original strand, 27777216 - 27777422
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 410  Q
    ||||| ||||||| ||||||  ||| ||||| | |||| |||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||    
T  27777216 gatttcaaaacacaggtacgggacaggtaacagagatacaggtacccaccccgaacccatacccaaactcgctctacatatataaaatcaatttattacc 27777315  T
Q  411 cc-ttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatt 509  Q
    || |||| || |||||||||   |||| ||||| |||||  || | ||||||  | | | | | ||||| ||||||||||||||||||||||  ||| ||    
T  27777316 cctttttgtataaatagaaatctaaactctaaatcattttacttaaacagtctgagtttcagtatttcagatgacactcacttatcatagttcactcctt 27777415  T
Q  510 tctcctt 516  Q
    |||||||    
T  27777416 tctcctt 27777422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 343 - 500
Target Start/End: Complemental strand, 36275080 - 36274924
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||||||| |||| ||||||||||||||||| ||||  || |  |||||| |||||||||||| || |||||||||| |||||||||| | |||||||||    
T  36275080 gggatataagtactcaccccgaacccatacctaaacatgtcccgaatgtaaaaaatcaatttactatcccttttatataaatagaaac-ccaaccctaaa 36274982  T
Q  443 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagt 500  Q
     |||||| |||||||||||| | |||   | ||||| |||||||||||||||||||||    
T  36274981 tcatttcactcacacagtcaaagtctcggtctttcagatgacactcacttatcatagt 36274924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 297 - 442
Target Start/End: Original strand, 12468223 - 12468367
Alignment:
Q  297 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 396  Q
    |||||||||||   |||||  |||||||||||||| ||| |||| |||||| |||||||| ||||||||| ||||| |||| ||||||  ||||||||||    
T  12468223 tttgggttttcctcgatttcgaaacacgggtacgagacatgtaa-tgggatgtaggtaccaaccccgaactcatactcaaattcgttccgaatgtagaaa 12468321  T
Q  397 atcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    ||||| ||||||||| ||||||| ||| |||||| |||| ||||||    
T  12468322 atcaacttattaccctttttatataaagagaaacgcaaatcctaaa 12468367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 378
Target Start/End: Complemental strand, 17469390 - 17469258
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 345  Q
    ||||| ||| |||||| ||||||||||||||||| |  || ||| ||||||||||||||||| | ||||| |||||||||||| |  ||  ||||| ||     
T  17469390 tacccacccgaaccaaacccaatttgacggattttccccgttttgactgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggt 17469291  T
Q  346 atataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||||| |||||||||||||||    
T  17469290 atataggtacccaccccaaacccatacccaaac 17469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 311 - 462
Target Start/End: Original strand, 9476031 - 9476182
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 410  Q
    ||||| |||| |||| ||||  ||||||||| ||||||||  |||||||| ||||||||||||||||| | | |  |||||||||||| || ||||||||    
T  9476031 gatttcaaaaaacggatacgggacaagtaacggggatataaatacccacctcgaacccatacccaaacccatcccgaatgtagaaaattaaattattacc 9476130  T
Q  411 ccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtca 462  Q
    |||| |||| ||||||||| | |||| |||||  ||||| ||||||||||||    
T  9476131 ccttatatataaatagaaattgaaactctaaattatttcactcacacagtca 9476182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 387 - 516
Target Start/End: Original strand, 6388599 - 6388728
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 486  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||| ||||||||||| |||||| |||||||| | | | ||| |   ||| | |||||||    
T  6388599 aatgtagaaaatcaatttattacccattttatataaacagaaacccaaaccctaaatcatttcactcacacaattagagtctcagactttaaaatgacac 6388698  T
Q  487 tcacttatcatagttatctcatttctcctt 516  Q
    ||||||||||||||| |||  |||||||||    
T  6388699 tcacttatcatagttctcttctttctcctt 6388728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 518
Target Start/End: Complemental strand, 5700426 - 5700219
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 410  Q
    ||||| ||||||| |||| || ||  ||||| ||||||||| |||||||| ||||||||||||||||  | | |  |||||| ||||| ||||| |||||    
T  5700426 gatttcaaaacacaggtatgagactggtaacggggatatagatacccacctcgaacccatacccaaatccatcccgaatgtataaaattaattttttacc 5700327  T
Q  411 ccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcattt 510  Q
    ||||||||| |||| |||||  |||| ||||| |||||| ||| || ||||| | ||| | | ||| | |||||| |||||||||||| || |||| | |    
T  5700326 ccttttatataaattgaaaccgaaactctaaatcatttcactcccatagtcagagtcttagtcttttagatgacagtcacttatcataattctctcttat 5700227  T
Q  511 ctcctttc 518  Q
    ||||||||    
T  5700226 ctcctttc 5700219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 368 - 458
Target Start/End: Complemental strand, 5793598 - 5793508
Alignment:
Q  368 catacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacaca 458  Q
    ||||| ||||||||| ||||||||| |||||||||| |||| |  ||||||| |||||||||||||||||||||| |||||| ||||||||    
T  5793598 catactcaaactcgtcctaaatgtaaaaaatcaattaattatcatttttatataaatagaaactcaaaccctaaatcatttcactcacaca 5793508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 297 - 402
Target Start/End: Complemental strand, 14687483 - 14687378
Alignment:
Q  297 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 396  Q
    ||||||||||| | ||||| ||||||| |||| |  || || ||| |||||||| ||| ||||||||||||||||||||||||||| || ||||| ||||    
T  14687483 tttgggttttccccgatttcaaaacacaggtatgggacgagaaacagggatatatgtatccaccccgaacccatacccaaactcgtcctgaatgtggaaa 14687384  T
Q  397 atcaat 402  Q
    ||||||    
T  14687383 atcaat 14687378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 296 - 405
Target Start/End: Original strand, 30481424 - 30481533
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||||  ||||||| |||| ||| ||| || || |||||   ||||||||||||||||||||||||||||||||||||||| |  |||||| ||    
T  30481424 gtttgggtttttcctgatttcaaaatacgagtatgagacgagtaatgaggatataggtacccaccccgaacccatacccaaactcgtcccgaatgtaaaa 30481523  T
Q  396 aatcaattta 405  Q
    ||| ||||||    
T  30481524 aattaattta 30481533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 430
Target Start/End: Original strand, 9642301 - 9642489
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 342  Q
    ||||||||| ||| ||| |||||  |||||||| ||| |  |||||| ||||||||||||||||| | ||||| |||||||||||| |  ||  |||||     
T  9642301 gggtacccgtccagacccatcccggtttgacgggttttccccgctttgactgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacg 9642400  T
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacccc-ttttatagaaatagaaac 430  Q
    ||| ||||  || ||| ||||||||||||| || || ||| | ||||||| ||||| | ||| ||||||| ||||||| ||||||||||    
T  9642401 gggttatatatatccatcccgaacccatactcatacccgtcccaaatgtaaaaaattatttttttacccctttttatataaatagaaac 9642489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 24928037 - 24927933
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| ||||| |  ||||||||||| || ||  ||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  24928037 tgggtatgggttttccctgatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 24927938  T
Q  393 gaaaa 397  Q
     ||||    
T  24927937 aaaaa 24927933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 343 - 458
Target Start/End: Complemental strand, 17108414 - 17108299
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||||||| |||| |||| |||||  |||||||||||| | |  | |||| ||||||||||||||| || ||||||| ||||||||||| ||||||||||    
T  17108414 gggatataagtacacacctcgaacttatacccaaactcatcccgattgtaaaaaatcaatttattatccattttatataaatagaaacttaaaccctaaa 17108315  T
Q  443 ccatttcgctcacaca 458  Q
      ||||| ||||||||    
T  17108314 taatttcactcacaca 17108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 20399680 - 20399595
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||||| ||||| |||||||||||| |  ||  ||||| || |||||| |||||||||||||||||| |||||||    
T  20399680 tgggtttgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccaccccgaacccattcccaaac 20399595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 14155545 - 14155494
Alignment:
Q  368 catacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata 419  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  14155545 catacccaaacccatcctaaatgtagaaaatcaatttattaccccttttata 14155494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 27932501 - 27932422
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 372  Q
    ||||| ||||||||| | ||||| |||||||||||| |  || |||||| || |||||||||||||||||||||||||||    
T  27932501 tgggtatgggttttccccgatttcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatac 27932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 391
Target Start/End: Original strand, 37960965 - 37961060
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt 391  Q
    |||||||||||| | ||||| |||||||||||| |  ||| ||||| || |||||||||| |||||||||| ||||||||||| ||| | ||||||    
T  37960965 gtttgggttttccccgatttaaaaacacgggtatgggacaggtaacaggtatataggtacacaccccgaactcatacccaaacccgtcccaaatgt 37961060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 406
Target Start/End: Complemental strand, 45236153 - 45236040
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| || |||||| ||||||| |||||||||||| |  ||  ||||  || |||||||||||||||||||||||||| ||| || ||| | |||||||    
T  45236153 tgggtatgagttttccctgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatatccatacccgtcccaaatgta 45236054  T
Q  393 gaaaatcaatttat 406  Q
     ||||| |||||||    
T  45236053 aaaaattaatttat 45236040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 1012654 - 1012618
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgt 382  Q
    |||||||||||||||||||||||||||||||||||||    
T  1012654 atataggtacccaccccgaacccatacccaaactcgt 1012618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 406
Target Start/End: Complemental strand, 14186355 - 14186295
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 406  Q
    |||||||||| ||||| |||||||||||||||| ||| || |||||||||||| |||||||    
T  14186355 atataggtactcaccctgaacccatacccaaacccgtcctgaatgtagaaaattaatttat 14186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 24870033 - 24870129
Alignment:
Q  302 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    |||||| | |||||||||||||||||| |  ||  ||||| || ||||||||||||||||||| |||||||| |||| ||| | ||||||| |||||    
T  24870033 gttttccccgattttaaaacacgggtatgtgacgggtaacgggtatataggtacccaccccgagcccatacctaaacccgtcccaaatgtaaaaaat 24870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 32303105 - 32303045
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  32303105 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 32303045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 377
Target Start/End: Complemental strand, 34777130 - 34777070
Alignment:
Q  317 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 377  Q
    |||||||||||| | ||| |||||| || || |||||||||||||||||||||||||||||    
T  34777130 aaaacacgggtatggaacgagtaacaggtatttaggtacccaccccgaacccatacccaaa 34777070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 430
Target Start/End: Original strand, 27056615 - 27056693
Alignment:
Q  353 tacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta-ccccttttatagaaatagaaac 430  Q
    |||||||||||||||||||| || |||||| | ||||||| ||||| | ||| ||| ||||||||||| ||||||||||    
T  27056615 tacccaccccgaacccatacacatactcgtcccaaatgtaaaaaattacttttttacccccttttatataaatagaaac 27056693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 6388516 - 6388581
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtaccca 358  Q
    ||||||||||| ||| | ||||||||||||||||||| | ||  ||||| ||||||||||||||||    
T  6388516 tgggtttgggtcttccccgattttaaaacacgggtacaagacgggtaacggggatataggtaccca 6388581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 15068588 - 15068668
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 374  Q
    |||||| |||||||| | ||||| |||| |||||||||  ||| ||||| |||||||| ||| |||||||||||||||||||    
T  15068588 tgggttcgggttttccccgatttcaaaatacgggtacgggacaggtaac-gggatatatgtatccaccccgaacccataccc 15068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 29108822 - 29108927
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||  | |||||||||||| ||||| |  ||  ||||| || ||||| |||||||||||||||||||||||| || ||| | |||||||    
T  29108822 tgggtatgggtttttcccgattttaaaacatgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccatacccgtcccaaatgta 29108921  T
Q  393 gaaaat 398  Q
     |||||    
T  29108922 aaaaat 29108927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 39445576 - 39445681
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||  | ||||| |||||||||||| |  ||| ||||| ||  |||||||||||||||||||| |||||||| || ||| | |||||||    
T  39445576 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtttataggtacccaccccgaactcatacccatacccgtcccaaatgta 39445675  T
Q  393 gaaaat 398  Q
     |||||    
T  39445676 aaaaat 39445681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 11880867 - 11880907
Alignment:
Q  402 tttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  11880867 tttattacccctcttatataaatagaaactcaaaccctaaa 11880907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 11898283 - 11898323
Alignment:
Q  402 tttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  11898283 tttattacccctcttatataaatagaaactcaaaccctaaa 11898323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 474 - 518
Target Start/End: Original strand, 29416359 - 29416403
Alignment:
Q  474 tttcatatgacactcacttatcatagttatctcatttctcctttc 518  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  29416359 tttcagatgacactcacttatcatagttttctcttttctcctttc 29416403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 380
Target Start/End: Complemental strand, 40789633 - 40789590
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactc 380  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  40789633 gtaacagggatatatgtacccaccccgaacctatacccaaactc 40789590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 2075902 - 2075864
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccataccca 375  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  2075902 gtaacgggtatataggtacccaccccgaacccataccca 2075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 2183609 - 2183691
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||| ||||||| ||||| |||| |||||||||| | | ||||  | |||||| ||||||||||||||| ||||| |||||    
T  2183609 gtttggattttctccgatttcaaaatacgggtacgagagaggtaatggagatatatgtacccaccccgaactcatactcaaac 2183691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 35747283 - 35747332
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaacc 437  Q
    ||||| |||||||||| ||||||||| |||||| |||||||||||||||||    
T  35747283 aatgttgaaaatcaatctattacccc-tttatataaatagaaactcaaacc 35747332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 2075775 - 2075832
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 303  Q
    ||||||||  |||||| ||||||||||||||||| || || ||| |||||||||||||    
T  2075775 tacccgcctgaaccaaacccaatttgacggattttctccgttttgactgggtttgggt 2075832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 10297542 - 10297461
Alignment:
Q  297 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||| | ||||| |||| ||||| |||  ||| ||||| |||||||| ||||| |||| ||||||||||| ||||    
T  10297542 tttgggttttccccgatttcaaaatacggggacgggacaggtaacggggatatatgtacctaccctgaacccataccaaaac 10297461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 377
Target Start/End: Complemental strand, 36897093 - 36897060
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaa 377  Q
    ||||||||||| ||||||||||||||||||||||    
T  36897093 ggatataggtaaccaccccgaacccatacccaaa 36897060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 375
Target Start/End: Original strand, 40248380 - 40248453
Alignment:
Q  302 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    |||||| | ||||| |||||||||||| || ||   |||| || ||||||||||||| ||||||||||||||||    
T  40248380 gttttccccgatttcaaaacacgggtatgagacggataacgggtatataggtacccatcccgaacccataccca 40248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 43113670 - 43113710
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaa 377  Q
    ||||| || ||||||||||||||||||||| ||||||||||    
T  43113670 gtaacaggtatataggtacccaccccgaactcatacccaaa 43113710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 292 - 518
Target Start/End: Complemental strand, 25210467 - 25210241
Alignment:
Q  292 ctgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt 391  Q
    |||||||| ||||||  | || ||||||||||||||| |  ||  |||||  ||||||| ||||||||||| |||||||||| |||| | | |  |||||    
T  25210467 ctgggtttaggtttttcccgactttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccataccaaaacccctcccgaatgt 25210368  T
Q  392 agaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcact 491  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||| |||||| |||||||||||  | ||| |   ||| | ||| ||||||||    
T  25210367 agaaaatcaatttgttacccattttatataaatagaaactcaaaccctaaatcatttcactcacacagtcggagtctcagaattttagatggcactcact 25210268  T
Q  492 tatcatagttatctcatttctcctttc 518  Q
    ||||||||||||||| |||| ||||||    
T  25210267 tatcatagttatctcttttcacctttc 25210241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 296 - 515
Target Start/End: Complemental strand, 30697010 - 30696791
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||| |||||||  ||||||||||||| || ||||| ||  ||||| | |||||| ||||||||||||||| |||||||||||   | | ||||||| ||    
T  30697010 gtttaggttttcattgattttaaaacatggatacgagacgggtaacagagatatatgtacccaccccgaactcatacccaaacctatcccaaatgtaaaa 30696911  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 495  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||| ||| || |||||||||| | | |||   | |||||||||||| || |||| |    
T  30696910 aatcaatttattacccattttatataaatagaaattcaaaccctaaatcatgtcactcacacagttagagtctcggtctttcatatgacattctcttacc 30696811  T
Q  496 atagttatctcatttctcct 515  Q
    |||||| |||  ||||||||    
T  30696810 atagttctctattttctcct 30696791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 516
Target Start/End: Original strand, 35248386 - 35248604
Alignment:
Q  294 gggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtag 393  Q
    ||||||||||||||   ||||  |||||||||||| |  ||  ||||  |||||| ||||||||||||||||||||||||||||| ||| || |||||||    
T  35248386 gggtttgggttttccacgattacaaaacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccatacccaaacccgtcctgaatgtag 35248485  T
Q  394 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactta 493  Q
    ||||   || ||| |||||||||||| ||||||||| | |||||||||| |||||| ||||||||| || | ||| | | ||||| ||||||||| ||||    
T  35248486 aaaa---atatat-accccttttatataaatagaaaatgaaaccctaaatcatttcactcacacagacagagtctcagtctttcaaatgacactcgctta 35248581  T
Q  494 tcatagttatctcatttctcctt 516  Q
    | |||||| |||| | |||||||    
T  35248582 ttatagttctctcttatctcctt 35248604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 516
Target Start/End: Original strand, 34214676 - 34214879
Alignment:
Q  312 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 411  Q
    |||| ||||||||||||||  ||| ||| | |  |||| || ||||||  ||||| ||||| ||||| ||| ||| ||||||||| |||||||||| |||    
T  34214676 atttcaaaacacgggtacgggacatgtatcggttatattggcacccacttcgaactcatactcaaacccgtcctagatgtagaaagtcaatttattgccc 34214775  T
Q  412 cttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttc 511  Q
      |||||| |||||||||||| ||| ||||| |||||| || ||||||||| | ||| | | ||||| ||||||||||||||||||||||  ||| ||||    
T  34214776 tgtttatataaatagaaactc-aactctaaatcatttcactaacacagtcagagtctcagtctttcacatgacactcacttatcatagttcgctcttttc 34214874  T
Q  512 tcctt 516  Q
    |||||    
T  34214875 tcctt 34214879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 458
Target Start/End: Complemental strand, 13531987 - 13531873
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    ||||||| |||  ||||||||||||| || ||||| ||  | | ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||     
T  13531987 ggatatatgtattcaccccgaacccacactcaaacccgccccacatgtagaaaatcaatttattatccattttatataaatagaaactcaaaccctaaat 13531888  T
Q  444 catttcgctcacaca 458  Q
    |||||| ||||||||    
T  13531887 catttcactcacaca 13531873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 249 - 397
Target Start/End: Original strand, 6027845 - 6027993
Alignment:
Q  249 ccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggata 348  Q
    |||||| |||||| ||||||||||||| ||| |  || ||| | ||||||||||||||| | |||||||||||| ||||| || ||  ||||| || |||    
T  6027845 ccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggttttccccgattttaaaacatgggtatgagacgggtaacaggtata 6027944  T
Q  349 taggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    |||||||||||||||||||||||| || || ||| || |||| ||||||    
T  6027945 taggtacccaccccgaacccatactcatacccgtcctgaatgcagaaaa 6027993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 390 - 517
Target Start/End: Complemental strand, 13954737 - 13954610
Alignment:
Q  390 gtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactca 489  Q
    |||||||||||| |||||||| |||||||| |||||||||||| ||||||||| |||||| ||||| | || | | ||| |   ||||| ||||||||||    
T  13954737 gtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctcagactttcagatgacactca 13954638  T
Q  490 cttatcatagttatctcatttctccttt 517  Q
    ||||| |||||| |||| ||||||||||    
T  13954637 cttatgatagttctctcttttctccttt 13954610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 390 - 517
Target Start/End: Complemental strand, 14095944 - 14095817
Alignment:
Q  390 gtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactca 489  Q
    |||||||||||| |||||||| |||||||| |||||||||||| ||||||||| |||||| ||||| | || | | ||| |   ||||| ||||||||||    
T  14095944 gtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctcagactttcagatgacactca 14095845  T
Q  490 cttatcatagttatctcatttctccttt 517  Q
    ||||| |||||| |||| ||||||||||    
T  14095844 cttatgatagttctctcttttctccttt 14095817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 506
Target Start/End: Original strand, 31600774 - 31600981
Alignment:
Q  299 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||| | || || |||||||| ||||  ||  |||||| | |||||| |||||||||   |||| ||||  |||| ||| |||| |||| ||  |    
T  31600774 tgggttttccccgaattgaaaacacgagtacataatgagtaacagagatatatgtacccacctgaaaccgatacttaaacgcgtcctaagtgtacaagtt 31600873  T
Q  399 caatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcata 498  Q
    ||||||| ||| ||||||||| |||||||||||||||| ||||| |||||| |||| ||||| | | ||| | | ||||||||||| |||||||||||||    
T  31600874 caatttaatacgccttttatataaatagaaactcaaactctaaatcatttcactcatacagttagagtcttagtctttcatatgacgctcacttatcata 31600973  T
Q  499 gttatctc 506  Q
    ||| ||||    
T  31600974 gttctctc 31600981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 501
Target Start/End: Complemental strand, 35965374 - 35965215
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata-gaaatagaaactcaaaccctaa 441  Q
    |||||| | |||||||| |||||||||||||||||| ||| |  ||||||||||||||||||||| |||||||||||  |||||| || | || || |||    
T  35965374 gggatacatgtacccactccgaacccatacccaaacccgtcccgaatgtagaaaatcaatttattgccccttttatactaaataggaattgaatccataa 35965275  T
Q  442 accatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 501  Q
    | |||||| |||| ||||| |  |||| | ||||||| || ||| |||||||||||||||    
T  35965274 atcatttcactcatacagtgaggatctcagtttttcagataacattcacttatcatagtt 35965215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 419
Target Start/End: Original strand, 4961495 - 4961577
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata 419  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||| |  ||| |||||||| ||||||||||| ||||||||    
T  4961495 gtaacagggatataggtacacacctcgaacccatacccaaactcgtcccgaatatagaaaatgaatttattacctcttttata 4961577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 492
Target Start/End: Complemental strand, 40359388 - 40359234
Alignment:
Q  338 taactgggatataggtacccaccccgaacccatacccaaactcgttct-aaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaac 436  Q
    |||| |||||||||||||||| | |||||  |||| ||||| |  ||| ||||||| ||||||||||||||||  |||||||| |||||||||||||||     
T  40359388 taacagggatataggtacccatctcgaactaatactcaaac-ctctctcaaatgtaaaaaatcaatttattacatcttttatataaatagaaactcaaag 40359290  T
Q  437 cctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactt 492  Q
     ||||| ||||||  |||| |||| | | ||| ||| | |||||||||||||||||    
T  40359289 tctaaatcatttcagtcacgcagttagagtctcaatctctcatatgacactcactt 40359234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 391
Target Start/End: Original strand, 13705361 - 13705459
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt 391  Q
    ||||| || |||||| | ||||| |||||||||||| || ||| ||||| || |||||||||||||||||||||||||||| |||| ||| | ||||||    
T  13705361 tgggtatgagttttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggtacccaccccgaacccatacctaaacccgtcccaaatgt 13705459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 457
Target Start/End: Original strand, 17845391 - 17845556
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt- 391  Q
    |||||||| |||||||  ||||| |||||||| ||| || ||  ||||  |  ||||| ||||||||||  ||||||||||||||| |||    |||||     
T  17845391 tgggtttgagttttcttcgatttcaaaacacgagtatgagaccggtaatggacatataagtacccacccttaacccatacccaaacccgtctcgaatgta 17845490  T
Q  392 agaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacac 457  Q
    | ||||||||||||||| || ||||||| |||||||||||| || |||||| |||||| |||||||    
T  17845491 aaaaaatcaatttattatcctttttatataaatagaaactccaaacctaaatcatttcactcacac 17845556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 38342519 - 38342604
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||| |||||| | |||||||||| |||| ||||  ||  ||||| |||||||| |||||||||||||||||||||||||||    
T  38342519 tgggtttgagttttccccgattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccatacccaaac 38342604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 15886421 - 15886366
Alignment:
Q  83 ttactactccatgaattaattttcttccatatcttatccttgataaagctaaaagt 138  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| || |||||    
T  15886421 ttactactccatgaattaattttcttccaaatcttatctttgataaaactgaaagt 15886366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 516
Target Start/End: Original strand, 29656828 - 29656959
Alignment:
Q  386 aaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgaca 485  Q
    ||||||| ||||||||||||||| |||||||||| ||||| ||||   ||||||||| |||||  |||||||||||| | ||| | | ||||| ||||||    
T  29656828 aaatgtataaaatcaatttattatcccttttatataaataaaaaccataaccctaaatcatttgactcacacagtcaaagtctcagtctttcagatgaca 29656927  T
Q  486 ctcac-ttatcatagttatctcatttctcctt 516  Q
    || || |||||||| || |||| | |||||||    
T  29656928 ctgactttatcataattctctcttatctcctt 29656959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 34544405 - 34544460
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    ||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||||||    
T  34544405 aatgtagaaaatctatttattacccattttatataaataaaaactcaaaccctaaa 34544460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 501
Target Start/End: Original strand, 35409248 - 35409360
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 486  Q
    |||||| ||||||||||| |||||| || ||||  |||| |||| ||||| |||||| ||||| || ||||||||| | ||| | | || ||||||||||    
T  35409248 aatgtataaaatcaattttttacccgttatata--aataaaaacccaaactctaaactatttcacttacacagtcagagtctcagtcttacatatgacac 35409345  T
Q  487 tcacttatcatagtt 501  Q
    |||||||||||||||    
T  35409346 tcacttatcatagtt 35409360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 8915938 - 8916042
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||||| ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  8915938 tgggtatgggttttctc-gatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgta 8916036  T
Q  393 gaaaat 398  Q
     |||||    
T  8916037 aaaaat 8916042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 11959038 - 11958957
Alignment:
Q  359 ccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaacccta 440  Q
    |||||||| ||||||||||||| |  | |||||| ||||||||||||||||| |||||||| ||  ||||||||||| ||||    
T  11959038 ccccgaactcatacccaaactcatcatgaatgtataaaatcaatttattacctcttttatataagcagaaactcaaaaccta 11958957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 37999572 - 37999467
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| || ||  ||||| || ||||| ||||||||||||||| ||||||||||| ||| | |||||||    
T  37999572 tgggtatgggttttccccgatctcaaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaactcatacccaaacccgtcccaaatgta 37999473  T
Q  393 gaaaat 398  Q
     |||||    
T  37999472 aaaaat 37999467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 24414176 - 24414236
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  24414176 gtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 24414236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 417
Target Start/End: Original strand, 34458833 - 34458956
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    |||||||||||||||||  |||| |||||||||||||| ||| |||||    |||||| ||| ||  ||||||| | || ||||||||||||  ||||||    
T  34458833 tgggtttgggttttctccaatttcaaaacacgggtacggaacgagtaatgaagatatatgtatccgtcccgaactcctatccaaactcgttc-gaatgta 34458931  T
Q  393 gaaaatcaatttattacccctttta 417  Q
     ||||| ||||||||| ||||||||    
T  34458932 aaaaataaatttattatccctttta 34458956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 18485739 - 18485652
Alignment:
Q  291 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||||| ||   |||||||||| ||||||||   ||  ||||| |||||||| |||||||||| ||||||||||||||||    
T  18485739 actgggtttgggttatcctcgattttaaaatacgggtacagtacgggtaacggggatatatgtacccaccctgaacccatacccaaac 18485652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 43371640 - 43371557
Alignment:
Q  295 ggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||| |||||| | |||||||||| |||||||||  ||  ||||| |||||||| ||||||||||| ||| |||||||||||    
T  43371640 ggtttgagttttccccgattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcatacccaaac 43371557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 448
Target Start/End: Original strand, 37309828 - 37309886
Alignment:
Q  390 gtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccattt 448  Q
    ||||||||||||||||| | |||||||| | ||||||||| |||||||||||| |||||    
T  37309828 gtagaaaatcaatttatcatcccttttacataaatagaaattcaaaccctaaagcattt 37309886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 7314648 - 7314753
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | |||||||||| ||| ||| |  ||  ||||| || |||||||| ||||||||||||||||||||| || ||| | |||||||    
T  7314648 tgggtatgggttttccccgattttaaaatacgagtatgggacgggtaacgggtatataggttcccaccccgaacccatacccacacccgtcccaaatgta 7314747  T
Q  393 gaaaat 398  Q
     |||||    
T  7314748 aaaaat 7314753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 24051624 - 24051705
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 374  Q
    |||||||||| |||||| |||||||||| ||| ||| |  ||  ||||| |||||||| ||||| |||||||||||||||||    
T  24051624 tgggtttgggatttctccgattttaaaatacgagtatgggacgggtaacagggatatatgtacctaccccgaacccataccc 24051705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 30846991 - 30846950
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  30846991 gtaacgggtatataggtacccaccccgaacccatacccaaac 30846950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 37106781 - 37106700
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 374  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||||||||||| ||||||||||||||    
T  37106781 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccactccgaacccataccc 37106700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 36128150 - 36128210
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || |||||||||| |||||||||||||||||||||| ||| | ||||||| ||||    
T  36128150 gtaacgggtatataggtactcaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 36128210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 9632422 - 9632371
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||||||| ||||||||||||||||||||||| ||| | ||||||| ||||    
T  9632422 atataggtatccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 9632371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 375
Target Start/End: Complemental strand, 22900883 - 22900801
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    ||||||||||||||  | ||||| |||||||||||| |  || |||||| ||| ||||  |||||||||||||| ||||||||    
T  22900883 tgggtttgggtttttcccgatttcaaaacacgggtatgggacgagtaacggggttatatatacccaccccgaactcataccca 22900801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 468
Target Start/End: Complemental strand, 33174365 - 33174307
Alignment:
Q  410 cccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatct 468  Q
    |||||||||| |||||||||| |||||||||||| | ||| |||||| ||||| |||||    
T  33174365 cccttttatataaatagaaacccaaaccctaaacaacttcactcacatagtcagaatct 33174307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 3547251 - 3547170
Alignment:
Q  297 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||  | ||||| |||| |||||||||  ||  ||||| | |||||| |||||||||||||||||||| ||||||    
T  3547251 tttgggtttttaccgatttcaaaatacgggtacgggacgggtaacggagatatatgtacccaccccgaacccatatccaaac 3547170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 14331572 - 14331531
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| |||||||| |||||||| ||||||||||||||||||    
T  14331572 gtaacggggatatatgtacccactccgaacccatacccaaac 14331531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 378
Target Start/End: Original strand, 42798012 - 42798073
Alignment:
Q  317 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||| || ||  ||||| || ||||| ||||||||||||||||||||| |||||    
T  42798012 aaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaacccatacacaaac 42798073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 45256859 - 45256798
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatt 407  Q
    ||||| |||||||||||||||||||||| |||| ||| | ||||||| ||||| | ||||||    
T  45256859 atataagtacccaccccgaacccatacctaaacccgtcccaaatgtaaaaaattactttatt 45256798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 398
Target Start/End: Complemental strand, 10920681 - 10920629
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||| ||||||||||||||||||||||  ||| | ||||||| |||||    
T  10920681 atataggtatccaccccgaacccatacccaaatccgtcccaaatgtaaaaaat 10920629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 39256398 - 39256430
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacgg 275  Q
    ||||||||||||||||||| |||||||||||||    
T  39256398 gggtacccgcccaaaccaaccccaatttgacgg 39256430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 45115629 - 45115569
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccata 371  Q
    ||||| |||||||||||| || ||  ||||| || ||||||||||||| ||||||||||||    
T  45115629 gatttcaaaacacgggtatgagacgggtaacaggtatataggtacccatcccgaacccata 45115569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 296 - 518
Target Start/End: Complemental strand, 38973007 - 38972785
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||||  | ||||| |||||| ||||| |  | | ||||| || ||||||||||||||||||||||||||| ||||| | |   ||||| | ||    
T  38973007 gtttgggtttttcccgatttcaaaacatgggtatgggataggtaacgggaatataggtacccaccccgaacccatactcaaacccatctcaaatgcataa 38972908  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 495  Q
    ||||||||||||| |||||||||| |||| |||||| |||||||||| |||||   |||||| || | | ||| ||| ||||||||||||||||||||||    
T  38972907 aatcaatttattaacccttttatataaatcgaaactgaaaccctaaatcatttgattcacactgttagagtctaaatctttcatatgacactcacttatc 38972808  T
Q  496 atagttatctcatttctcctttc 518  Q
    |||||| |||| | |||||||||    
T  38972807 atagttctctcttatctcctttc 38972785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 246 - 458
Target Start/End: Complemental strand, 6810293 - 6810081
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 345  Q
    |||||| || |||||| | |||||||||||||||  | |||||| | || |||||||||||| | ||||||| |||||||||||| |||  |||||  ||    
T  6810293 tacccgtccgaaccaaactcaatttgacggattttttccgctttgaatgagtttgggttttccccgattttagaacacgggtacggaacgggtaacgagg 6810194  T
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacca 445  Q
    ||||| |||| |||||||||||||||||||||| | | |  ||||  ||||||||||||||| |||||||||||  ||||||||| |||||| ||||  |    
T  6810193 atataagtactcaccccgaacccatacccaaacccatcccgaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatga 6810094  T
Q  446 tttcgctcacaca 458  Q
    |||| ||||||||    
T  6810093 tttcactcacaca 6810081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 337 - 513
Target Start/End: Complemental strand, 29665015 - 29664839
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaac 436  Q
    ||||| |||||||||||||||||  ||||| ||||||||||| ||| |  |||||| |||||||||||| ||||||||||||  ||||||||||||||||    
T  29665015 gtaacggggatataggtacccacttcgaactcatacccaaacccgtcccgaatgtacaaaatcaatttactaccccttttatttaaatagaaactcaaac 29664916  T
Q  437 cctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctc 513  Q
     ||||| ||||||  | |||  |||| | ||| | | ||||| ||||||||||||||||||| || |||| ||||||    
T  29664915 tctaaatcatttcatttacattgtcagagtctcagtatttcagatgacactcacttatcataattctctcttttctc 29664839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 243 - 501
Target Start/End: Complemental strand, 17153306 - 17153049
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 342  Q
    |||||| ||||| |||||| |||| |||||||| ||||  | | ||| |||| ||||| ||||| || |||||||||||| |||||||  ||   |||||    
T  17153306 gggtactcgcccgaaccaaacccactttgacggttttctct-gttttaactgagtttgagttttttccgattttaaaacatgggtacgggacggataact 17153208  T
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
      |||||| |||| || ||| ||||||||||||||| ||| |  |||||||||||||||||||||||||||| || | |||||||||  |||| ||||||    
T  17153207 atgatatatgtactcatcccaaacccatacccaaacccgtcccgaatgtagaaaatcaatttattaccccttctagataaatagaaatccaaaacctaaa 17153108  T
Q  443 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 501  Q
      ||||| |||||||||||| |  || | | ||||| |||| | |||||||||||||||    
T  17153107 taatttcactcacacagtcagatactcagtctttcaaatgagattcacttatcatagtt 17153049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 344 - 516
Target Start/End: Original strand, 27900453 - 27900623
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    ||||||||||||||| | ||||||||||||||||  ||  |  |||||| |||||||||||||| || |||||||| ||||||||||| ||||||||||     
T  27900453 ggatataggtacccatctcgaacccatacccaaatccgccccgaatgtataaaatcaatttatttcctcttttatataaatagaaactgaaaccctaaat 27900552  T
Q  444 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
    ||||||  ||||||| ||| ||||  | | ||||| ||||||||||||||  |||||| |||| | |||||||    
T  27900553 catttcagtcacacattcagaatc--agtctttcagatgacactcacttaatatagttctctcttatctcctt 27900623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 296 - 448
Target Start/End: Original strand, 16311297 - 16311448
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    ||||| ||||| || ||||| |||||||| |||||| ||   |||| |||||||||||||||||||||||||||||  |||||  ||    ||||| |||    
T  16311297 gtttgagttttttccgatttcaaaacacgagtacgagacggataacagggatataggtacccaccccgaacccatattcaaacctgtctcgaatgttgaa 16311396  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccattt 448  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||| |||||    
T  16311397 aatcaatttattatcccttttatataaatagaaac-caaaccctaaatcattt 16311448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 387 - 518
Target Start/End: Complemental strand, 35584110 - 35583980
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 486  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||| | ||| | | ||||| ||| |||    
T  35584110 aatgtacaaaatcaatttattaccc-ttttatataaatagaaactcaaaccctaaatcattttgctcacacagtcagagtctcagtctttcagatgtcac 35584012  T
Q  487 tcacttatcatagttatctcatttctcctttc 518  Q
    ||| ||||||  ||| |||  |||||||||||    
T  35584011 tcatttatcactgttctctgttttctcctttc 35583980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 506
Target Start/End: Original strand, 40187661 - 40187870
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||||||||| |  |||| ||||||||||| ||| ||  ||||| | ||||||||||  |||||  ||| ||||||||||||||| |  ||| |||||    
T  40187661 gtttgggttttccccaatttcaaaacacgggtgcgagacgggtaacggagatataggtattcaccca-aactcatacccaaactcgtcccgaatatagaa 40187759  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 495  Q
    ||| ||||||||||| |||||||| |||||| ||   ||| |||||| |||||  |||||| ||||| | | | ||| ||||| ||||||||||||||||    
T  40187760 aattaatttattacctcttttatataaatagtaatgaaaatcctaaatcattttactcacatagtcagagtttcaatctttcagatgacactcacttatc 40187859  T
Q  496 atagttatctc 506  Q
    |||||| ||||    
T  40187860 atagttctctc 40187870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 246 - 398
Target Start/End: Original strand, 35193943 - 35194095
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 345  Q
    |||||||||||| ||| |||||||||||||||||  | || |||  |||| ||||||| ||||||| |||||||||||||||| |  ||  ||||| ||     
T  35193943 tacccgcccaaatcaaacccaatttgacggattttttccgttttggctggatttgggtattctctgtttttaaaacacgggtatgggacgggtaacgggt 35194042  T
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||||||||||| ||| ||||| ||||| ||| |  ||||||||||||    
T  35194043 atataggtacccaccccaaactcatactcaaacccgtcccgaatgtagaaaat 35194095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 8020694 - 8020507
Alignment:
Q  302 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaa 401  Q
    |||||| | ||||| |||||||||||||  ||   ||||| ||||||||||||| || | ||||| ||||| ||||| |||||| |||||||||||||||    
T  8020694 gttttccccgatttcaaaacacgggtactgaatgggtaacagggatataggtactcatctcgaactcatacgcaaacccgttctgaatgtagaaaatcaa 8020595  T
Q  402 tttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactca 489  Q
    |||| ||||||||||||| |||   ||||  ||||||||||  ||| | |||| ||||||| | ||| | | ||||| ||||||||||    
T  8020594 tttactaccccttttatataaaggaaaacctaaaccctaaattattccactcaaacagtcagagtctcagtctttcaaatgacactca 8020507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 397
Target Start/End: Complemental strand, 12447515 - 12447365
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 345  Q
    ||||| ||| |||||| |||||||||||||||||||  |  ||| |||||||||||||||||  ||||| |||||||| |||| |  ||| ||||  ||     
T  12447515 tacccacccgaaccaaacccaatttgacggatttccc-cattttgactgggtttgggttttccttgattgtaaaacacaggtatgggacaggtaatgggt 12447417  T
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    |||||||||||||||||||||| |||||||||| ||| | |||| |||||||    
T  12447416 atataggtacccaccccgaacctatacccaaacccgtcccaaatatagaaaa 12447365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 300 - 516
Target Start/End: Original strand, 18451893 - 18452109
Alignment:
Q  300 gggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatc 399  Q
    |||||||| | ||||| |||| || ||||||| ||| |||||   |||||| ||||||||||||||| ||||  ||||||||| |  | |||||||||||    
T  18451893 gggttttccccgatttgaaaatacaggtacgagacatgtaacacagatataagtacccaccccgaactcataatcaaactcgtcccgattgtagaaaatc 18451992  T
Q  400 aatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatag 499  Q
    ||||||||| ||||||||||  ||||||||  | || | || | |||||| |||||||||| | | |||   | ||||| |||| | ||||||||||| |    
T  18451993 aatttattatcccttttatattaatagaaatacgaatcttagatcatttcactcacacagttaaagtctcggtctttcagatgatagtcacttatcatgg 18452092  T
Q  500 ttatctcatttctcctt 516  Q
    || |||| |||||||||    
T  18452093 ttctctcttttctcctt 18452109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 458
Target Start/End: Complemental strand, 12457537 - 12457440
Alignment:
Q  361 ccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacaca 458  Q
    |||||| ||||||||||| ||| |  ||||||||||||||||||||||||||||| ||| ||||||||||  |||  ||||| |||||| ||||||||    
T  12457537 ccgaactcatacccaaacccgtcccgaatgtagaaaatcaatttattacccctttaatataaatagaaacctaaagtctaaatcatttcactcacaca 12457440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 247 - 378
Target Start/End: Original strand, 12712512 - 12712643
Alignment:
Q  247 acccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggga 346  Q
    ||||||||||||||| ||| ||||||| | ||| |  || ||| |||| |||||||||||||| ||||| |||| |||||||||  ||   |||| | ||    
T  12712512 acccgcccaaaccaaccccgatttgacaggttttccccgatttgactgagtttgggttttctccgatttcaaaatacgggtacgggacggataacggaga 12712611  T
Q  347 tataggtacccaccccgaacccatacccaaac 378  Q
    |||| ||||||||| |||||||||||||||||    
T  12712612 tatatgtacccacctcgaacccatacccaaac 12712643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 299 - 398
Target Start/End: Complemental strand, 30996678 - 30996579
Alignment:
Q  299 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||||| |||||||||||||| ||| |  ||| ||||| || ||||||||||||||||||||| || |||||||| ||| | ||||||| |||||    
T  30996678 tgggttttctccgattttaaaacacgagtatgggacaggtaacgggtatataggtacccaccccgaacacacacccaaacccgtcccaaatgtaaaaaat 30996579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 425
Target Start/End: Original strand, 32574941 - 32575071
Alignment:
Q  295 ggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtaga 394  Q
    ||||||||||||| | ||||| ||||||| | ||||  |   |||||  ||||||| ||||||| |||||||||| |||||||| ||  |  ||||||||    
T  32574941 ggtttgggttttccccgatttcaaaacacagatacgggatgggtaacatggatatatgtacccatcccgaacccaaacccaaacccgccccgaatgtaga 32575040  T
Q  395 aaatcaatttattaccccttttatagaaata 425  Q
    | ||||||||||||||||||||||| |||||    
T  32575041 atatcaatttattaccccttttatataaata 32575071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 516
Target Start/End: Original strand, 7350458 - 7350631
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||||||||| | |||||||||||||||||  |||| |||   ||||||||||||| ||||||||| | |||||||| |||||| ||   ||||||||||    
T  7350458 gggatataggcatccaccccgaacccatacttaaacccgtctcaaatgtagaaaattaatttattatcgcttttatataaatagtaatcgaaaccctaaa 7350557  T
Q  443 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
     |||||  |||||| ||| | | ||  ||| ||| | | ||| |||||||||||||||| |||| | |||||||    
T  7350558 tcattttactcacatagttagagtcgcaatctttgagacgacgctcacttatcatagttctctcttatctcctt 7350631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 406
Target Start/End: Original strand, 38006423 - 38006583
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 345  Q
    ||||||||| ||||||  || ||||||||| ||| || |  ||| ||||||||||||||||| |  |||| |||| ||||||| |  ||  ||||| |      
T  38006423 tacccgccctaaccaaatccgatttgacgggttttctccattttgactgggtttgggttttccccaatttcaaaatacgggtatgggacgcgtaacagat 38006522  T
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 406  Q
    ||||||||||||||||||||||||||||||||  ||| |  ||||| |||||| |||||||    
T  38006523 atataggtacccaccccgaacccatacccaaatccgtcccgaatgttgaaaattaatttat 38006583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 374
Target Start/End: Original strand, 10822477 - 10822608
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 342  Q
    ||||||||||||||||| | | | ||||||||| ||| |  |  ||| ||||| ||||||||||||| ||||| ||||||||||||    ||  |||||     
T  10822477 gggtacccgcccaaacccacctcgatttgacgggttttccccattttgactggatttgggttttctccgatttcaaaacacgggtataggacgggtaacg 10822576  T
Q  343 gggatataggtacccaccccgaacccataccc 374  Q
    ||| |||| |||||||||||||||||||||||    
T  10822577 gggttatatgtacccaccccgaacccataccc 10822608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 4920914 - 4920809
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||| ||||||||||||||||||||||| ||| | |||||||    
T  4920914 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaacccatacccaaacccgtcccaaatgta 4920815  T
Q  393 gaaaat 398  Q
     |||||    
T  4920814 aaaaat 4920809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 506
Target Start/End: Original strand, 16366526 - 16366663
Alignment:
Q  371 acccaaactcgttctaaatgtagaaaatcaatttattac-cccttttatagaaatagaaactc-aaaccctaaaccatttcgctcacacagtcacaatct 468  Q
    |||||||||||| |  |||||||||||| | |||||||| |||||||||| ||| |||||||| ||||| |||| ||||||  ||||||| ||| |||||    
T  16366526 acccaaactcgtcccgaatgtagaaaattattttattactcccttttatataaaaagaaactcaaaaccataaatcatttccgtcacacaatcagaatct 16366625  T
Q  469 gaatttttcatatgacactcacttatcatagttatctc 506  Q
     |   | ||| ||||||||||||||||| |||| ||||    
T  16366626 cagcctatcagatgacactcacttatcagagttctctc 16366663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 377
Target Start/End: Original strand, 28569025 - 28569106
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 377  Q
    |||||| ||||| | ||||| ||||  ||||||||  ||  ||||| |||||||||||||||||||||||||||||||||||    
T  28569025 gtttggattttccccgatttcaaaatgcgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 398
Target Start/End: Complemental strand, 10127116 - 10127064
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  10127116 atataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 10127064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 20973497 - 20973581
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 377  Q
    ||||| ||||||||| | |||||| ||||||||||| |  |   ||||| || ||||||||||||||||||||||||||||||||    
T  20973497 tgggtatgggttttccccgattttcaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccatacccaaa 20973581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 442
Target Start/End: Complemental strand, 24207772 - 24207626
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggta--cccaccccgaacccatacccaaactcgttctaaatg 390  Q
    |||||||| |||||| | ||||| ||||||| ||||   ||| | |||| |||||||| |||  ||||||| ||| |||||||||||| ||     ||||    
T  24207772 tgggtttgagttttccccgatttcaaaacacaggtatcgaacgaataacagggatataagtatacccaccctgaagccatacccaaacccg-----aatg 24207678  T
Q  391 tagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||||||| |||||||||  ||||||||| ||||| ||||| ||||||||||    
T  24207677 tagaaaattaatttattaatccttttatataaataaaaactaaaaccctaaa 24207626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 378
Target Start/End: Original strand, 12773776 - 12773907
Alignment:
Q  247 acccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggga 346  Q
    ||||||||||||||| ||| ||||||| | ||| |  || ||| | || |||||||||||||| ||||| |||| |||||||||  ||   |||| | ||    
T  12773776 acccgcccaaaccaaccccgatttgacaggttttccccgatttgattgagtttgggttttctccgatttcaaaatacgggtacgggacggataacggaga 12773875  T
Q  347 tataggtacccaccccgaacccatacccaaac 378  Q
    |||| ||||||||| ||||||||||| |||||    
T  12773876 tatatgtacccacctcgaacccatactcaaac 12773907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 299 - 398
Target Start/End: Complemental strand, 15890288 - 15890190
Alignment:
Q  299 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||||| ||||| |||||||||||| |  ||  ||||| || ||||||||||||| |||||||||||||||| || ||| | ||||||| |||||    
T  15890288 tgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatataggtaccca-cccgaacccatacccatacccgtcccaaatgtaaaaaat 15890190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 457467 - 457529
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 449  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||  ||| |||||| ||||||    
T  457467 aatgtataaaatcaatttattacaccttttatataaatagaaaccaaaatcctaaatcatttc 457529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 4583207 - 4583102
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||||| |||||||| |||||||||||| || ||| | |||||||    
T  4583207 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggttcccaccccaaacccatacccatacccgtcccaaatgta 4583108  T
Q  393 gaaaat 398  Q
     |||||    
T  4583107 aaaaat 4583102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 6092563 - 6092624
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || ||||||||||||||||||||||||||||||||  ||| | ||||||| |||||    
T  6092563 gtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaat 6092624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 406
Target Start/End: Original strand, 12834619 - 12834688
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 406  Q
    ||||| || ||||||||||| |||||||||||||||||| || ||| | ||||||| ||||| |||||||    
T  12834619 gtaacaggtatataggtacctaccccgaacccatacccatacccgtcccaaatgtaaaaaattaatttat 12834688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 12866552 - 12866657
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| || |||||||| ||||| |||||| ||||| |  ||  ||||| || ||||||||||||||| |||||||||||||| || ||| | |||||||    
T  12866552 tgggtatgagttttctccgatttcaaaacatgggtatgggacgggtaacaggtatataggtacccaccgcgaacccatacccatacccgtcccaaatgta 12866651  T
Q  393 gaaaat 398  Q
     |||||    
T  12866652 aaaaat 12866657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 449
Target Start/End: Original strand, 39887173 - 39887258
Alignment:
Q  364 aacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 449  Q
    |||||| || ||||| ||| ||||| ||||||||||||||||||  | |||||||| |||||||||||| ||  ||||| ||||||    
T  39887173 aacccacactcaaacccgtcctaaacgtagaaaatcaatttattctctcttttatataaatagaaactcgaaatctaaatcatttc 39887258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 398
Target Start/End: Original strand, 22694959 - 22695007
Alignment:
Q  350 aggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  22694959 aggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 22695007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 398
Target Start/End: Original strand, 42987533 - 42987585
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||||||| ||||||||||||||||||| ||| | ||||||| |||||    
T  42987533 atataggtacccatcccgaacccatacccaaacccgtcccaaatgtaaaaaat 42987585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 375
Target Start/End: Original strand, 29245952 - 29246034
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    ||||| || |||||||| ||||| |||||||||||| |  || | ||||  | ||||||||||||||||| ||||||||||||    
T  29245952 tgggtatgagttttctccgatttcaaaacacgggtatgggacgaataacatgtatataggtacccaccccaaacccataccca 29246034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 1218799 - 1218738
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || |||||||||||||| ||||||||||||||| || ||| | ||||||| |||||    
T  1218799 gtaacgggtatataggtacccactccgaacccatacccatacccgtcccaaatgtaaaaaat 1218738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 23044992 - 23045077
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||| ||||||| | ||||| |||| |||||||||  |   ||||| | |||||| |||||||||||||||||||||| ||||    
T  23044992 tgggtttaggttttccccgatttcaaaatacgggtacgggatgggtaacggagatatatgtacccaccccgaacccataccaaaac 23045077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 6e-32; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 296 - 494
Target Start/End: Original strand, 30904819 - 30905016
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 395  Q
    |||||| |||| |||||||| ||||||||||||||  ||  ||| | |||||||||||||||||||||||||||||||||||  |||    ||||||| |    
T  30904819 gtttggcttttttctgatttcaaaacacgggtacgggacgggta-cggggatataggtacccaccccgaacccatacccaaatccgtctcgaatgtagga 30904917  T
Q  396 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttat 494  Q
    |||||||||| ||||||||||||| |||||||||| |||||||| || |||||| |||| | ||||| | |   | | |||||||||||||||||||||    
T  30904918 aatcaatttactaccccttttatataaatagaaacccaaacccttaatcatttcactcatatagtcagagttgtagtctttcatatgacactcacttat 30905016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 252 - 458
Target Start/End: Original strand, 772756 - 772958
Alignment:
Q  252 cccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatatag 351  Q
    |||||||||| |||||||||||| |||| | ||  ||| ||||||||| |||||||   |||| ||||||||   || |  ||| ||||| ||||||||     
T  772756 cccaaaccaaacccaatttgacgaattttcctcattttgactgggtttaggttttc---gattgtaaaacacaaatatgggacaggtaacagggatatat 772852  T
Q  352 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgc 451  Q
     |||||||||||||| ||| ||||||   || | |||| ||||||||||||||||||||| |||| || ||||||||||||||||| | || |||||| |    
T  772853 ctacccaccccgaactcatgcccaaatatgtcccaaatatagaaaatcaatttattaccc-ttttgtataaatagaaactcaaaccttgaatcatttcac 772951  T
Q  452 tcacaca 458  Q
    |||||||    
T  772952 tcacaca 772958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 363 - 516
Target Start/End: Complemental strand, 27252585 - 27252433
Alignment:
Q  363 gaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtca 462  Q
    ||||||||||||||||||   || |||||||||  |||||||||||||| ||||||| ||||||||||  ||| | |||| |||||| |||||||||| |    
T  27252585 gaacccatacccaaactcaccctgaatgtagaatttcaatttattacccattttatataaatagaaaccaaaatcataaatcatttcactcacacagtta 27252486  T
Q  463 caatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
     | | | | | ||||| |||||||||||||||| ||||| |||| |||||||||    
T  27252485 gagtatcagtctttcagatgacactcacttatcttagttctctc-tttctcctt 27252433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 454
Target Start/End: Original strand, 37032192 - 37032259
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctca 454  Q
    |||||||||||| |||||||||||| ||||||| ||||| |||||||||||||||| |||||| ||||    
T  37032192 aatgtagaaaattaatttattacccattttatataaataaaaactcaaaccctaaatcatttcactca 37032259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 398
Target Start/End: Original strand, 48305660 - 48305746
Alignment:
Q  312 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    |||| |||||||||||| | ||| |||| | || |||||||||||||||||||||| |||||||||| ||||| ||||||| |||||    
T  48305660 atttcaaaacacgggtatggaacgagtatcgggtatataggtacccaccccgaacctatacccaaacccgttccaaatgtaaaaaat 48305746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 44639318 - 44639257
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  44639318 gtaacgggtatataggtacccaccccgaacccatacccaaacccgttccaaatgtaaaaaat 44639257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 52198199 - 52198138
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  52198199 gtaacgggtatataggtacccaccccgaacccatacccaaacccgttccaaatgtaaaaaat 52198138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 382
Target Start/End: Complemental strand, 53631992 - 53631903
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 382  Q
    |||||||| |||||| |  ||||||||||||| ||| || ||  ||||| || ||||||||||||||||||||||||||| |||||||||    
T  53631992 tgggtttgagttttcccaaattttaaaacacgtgtatgagacgggtaacgggtatataggtacccaccccgaacccatactcaaactcgt 53631903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 23546986 - 23547046
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  23546986 gtaacgggtatataggtacccaccccgaacccatacccaaactcgtcccaaatgtaaaaaa 23547046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 42243400 - 42243349
Alignment:
Q  368 catacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata 419  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  42243400 catacccaaacccatcctaaatgtagaaaatcaatttattaccccttttata 42243349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 34119726 - 34119660
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 377  Q
    |||||||||||||||||| || ||   |||| || ||||||||||||||||||||||||||||||||    
T  34119726 gattttaaaacacgggtatgagacggataacaggtatataggtacccaccccgaacccatacccaaa 34119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 40890384 - 40890279
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||||||| ||| | || |||||||||||||||| ||| |   |||||||||||||||||||||||  |||| |||| |||||||||||||||| ||| |    
T  40890384 gggatataagtatctacgccgaacccatacccaagctcatctcaaatgtagaaaatcaatttatta-tccttctatataaatagaaactcaaactctaga 40890286  T
Q  443 ccatttc 449  Q
     ||||||    
T  40890285 tcatttc 40890279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 382
Target Start/End: Original strand, 4016044 - 4016133
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 382  Q
    ||||||||||||||| | ||||| |||||| ||||| |  ||   |||| || |||||||||||||| ||||||||||||||||||||||    
T  4016044 tgggtttgggttttccccgatttcaaaacatgggtatgggacggataacgggtatataggtacccactccgaacccatacccaaactcgt 4016133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 44172714 - 44172609
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||| ||||||||||||||||||||||||||| ||| | |||||||    
T  44172714 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgta 44172615  T
Q  393 gaaaat 398  Q
     |||||    
T  44172614 aaaaat 44172609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 44179414 - 44179309
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||| ||||||||||||||||||||||||||| ||| | |||||||    
T  44179414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgta 44179315  T
Q  393 gaaaat 398  Q
     |||||    
T  44179314 aaaaat 44179309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 462
Target Start/End: Original strand, 3414537 - 3414702
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    |||||||| |||||  | |||||| ||||||| |||||  ||| ||||| |||||    |||| || |||||| |||||| ||||| ||| |  ||||||    
T  3414537 tgggtttgagtttttcccgattttcaaacacgagtacgggacaggtaacggggat----gtactcatcccgaatccatactcaaacccgtacctaatgta 3414632  T
Q  393 gaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtca 462  Q
    |||||||| |||| |||||||||| || ||||| |||   |||||||||| |||||| |||||| |||||    
T  3414633 gaaaatcattttaataccccttttctataaataaaaatcgaaaccctaaatcatttcactcacatagtca 3414702  T

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Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 34154502 - 34154398
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| || |||||| | ||||| |||||| ||||| |||||  |||||  | |||||||||||||||||||||||||||||| || ||| | |||||||    
T  34154502 tgggtatgtgttttccccgatttcaaaacatgggtatgaaacgggtaacaagaatataggtacccaccccgaacccatacccatacccgtcccaaatgta 34154403  T
Q  393 gaaaa 397  Q
     ||||    
T  34154402 aaaaa 34154398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 392
Target Start/End: Original strand, 7469778 - 7469877
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| ||||| |  ||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  7469778 tgggtatgggttttccctgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacacaaacccgtcccaaatgta 7469877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 3385875 - 3385988
Alignment:
Q  312 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 411  Q
    |||| ||||||||||||||  ||| |||||  ||||||||||| ||||| |||| ||||||| |||| ||| |  |||||| ||||||| |||| || ||    
T  3385875 atttcaaaacacgggtacgggacaggtaacgaggatataggtagccaccacgaatccataccaaaacccgtacctaatgtaaaaaatcattttagtaacc 3385974  T
Q  412 cttttatagaaata 425  Q
    ||||| || |||||    
T  3385975 cttttctataaata 3385988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 311 - 372
Target Start/End: Complemental strand, 29842378 - 29842317
Alignment:
Q  311 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 372  Q
    |||||||||||||||||| |  ||  ||||| || |||||||||||||||||||||||||||    
T  29842378 gattttaaaacacgggtatgggactggtaacgggaatataggtacccaccccgaacccatac 29842317  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 31271301 - 31271342
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  31271301 gtaactgggatataggtacccaccccgaactcatactcaaac 31271342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 39655273 - 39655358
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||| |||||||||||||||    
T  39655273 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaacccatacccaaac 39655358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 39728715 - 39728654
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || ||||| ||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  39728715 gtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 39728654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 44252791 - 44252750
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  44252791 gtaacaggtatataggtacccaccccgaacccatacccaaac 44252750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 4557305 - 4557389
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 377  Q
    ||||||||||||||| | | ||| |||||| ||||| |  ||  |||||  | ||||||||||||||||||||||||||||||||    
T  4557305 tgggtttgggttttccccgttttcaaaacatgggtatgggacgggtaacgagtatataggtacccaccccgaacccatacccaaa 4557389  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 23580896 - 23580833
Alignment:
Q  312 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    |||| |||||||| ||| |||||  ||||| || |||||||||||||| |||||||||||||||    
T  23580896 atttcaaaacacgagtatgaaacgggtaacgggtatataggtacccactccgaacccataccca 23580833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 31126848 - 31126899
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||    
T  31126848 atataggtatccaccccgaactcatacccaaactcgtcccaaatgcagaaaa 31126899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 49025770 - 49025664
Alignment:
Q  291 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatg 390  Q
    ||||||||||||||||| | ||| | |||||||||||| |  ||  ||||| || |||||||||| || || |||||||||||||||| ||| | |||||    
T  49025770 actgggtttgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacacatcc-gaacccatacccaaacccgtcccaaatg 49025672  T
Q  391 tagaaaat 398  Q
    || |||||    
T  49025671 taaaaaat 49025664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 375
Target Start/End: Original strand, 10043282 - 10043364
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    ||||||||||||||| ||| ||| |||||| ||||| |  ||  ||||| ||| |||| | ||||||||||||||||||||||    
T  10043282 tgggtttgggttttccctggtttcaaaacatgggtatgggacgggtaacggggttatatgcacccaccccgaacccataccca 10043364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 375
Target Start/End: Original strand, 48390817 - 48390899
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || ||||||||||||| || |||||||||||||    
T  48390817 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggaatataggtacccatcctgaacccataccca 48390899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 22535885 - 22535946
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || ||| ||| ||||||||||||||||||| || |||||| ||||||||| |||||    
T  22535885 gtaacgggtatacaggcacccaccccgaacccatacacatactcgtcctaaatgtaaaaaat 22535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 29284380 - 29284339
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| || ||||||||||||| |||||||||||||||||||    
T  29284380 gtaacgggtatataggtacccagcccgaacccatacccaaac 29284339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 29284483 - 29284426
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 303  Q
    ||||||||| |||||| ||||||||||||| ||| || || ||| |||||||||||||    
T  29284483 tacccgcccgaaccaaacccaatttgacgggttttctccgttttgactgggtttgggt 29284426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 49580152 - 49580047
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  |||||  | ||||||||||||||| ||||||||||| ||||| ||| | |||||||    
T  49580152 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgagtatataggtacccacctcgaacccatactcaaacccgtcccaaatgta 49580053  T
Q  393 gaaaat 398  Q
     |||||    
T  49580052 aaaaat 49580047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 54317188 - 54317147
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| || ||||||||||||||||||||||||| |||||||    
T  54317188 gtaacgggtatataggtacccaccccgaacccattcccaaac 54317147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 1772337 - 1772373
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacggattt 279  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  1772337 gggtacctgcccaaaccaatcccgatttgacggattt 1772373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 2487824 - 2487780
Alignment:
Q  352 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 396  Q
    ||||||||||||||||||||||||||| |   |||||||||||||    
T  2487824 gtacccaccccgaacccatacccaaaccctacctaaatgtagaaa 2487780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 10043220 - 10043280
Alignment:
Q  243 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 303  Q
    ||||||||| ||| ||||| ||||||||||||| ||| || | |||| |||||||||||||    
T  10043220 gggtacccgaccataccaaccccaatttgacgggttttctccactttgactgggtttgggt 10043280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 411 - 455
Target Start/End: Complemental strand, 14216450 - 14216406
Alignment:
Q  411 ccttttatagaaatagaaactcaaaccctaaaccatttcgctcac 455  Q
    ||||||||| ||| ||||||||||||||||||| ||||| |||||    
T  14216450 ccttttatataaaaagaaactcaaaccctaaacaatttcactcac 14216406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 44953435 - 44953539
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || |||||||||| |||||||||| ||||| ||||| ||| | |||||||    
T  44953435 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtactcaccccgaactcatactcaaacccgtcccaaatgta 44953534  T
Q  393 gaaaa 397  Q
     ||||    
T  44953535 aaaaa 44953539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 494
Target Start/End: Original strand, 23533552 - 23533806
Alignment:
Q  241 gcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaa 340  Q
    |||||||||| ||| |||||| ||||||||||||| |||    || ||| ||||||||||||||||| | ||||| |||| ||||||| |  |   ||||    
T  23533552 gcgggtaccctcccgaaccaaacccaatttgacgggtttttcccgatttgactgggtttgggttttccccgatttgaaaatacgggtatgcgatgggtaa 23533651  T
Q  341 ctgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt-agaaaatcaattta-ttaccccttttatagaaatagaaactcaaaccc 438  Q
     ||||||||| ||||||||  ||||||||||||||||||||| |  ||||| | |||||||||||| | ||||||||| || || ||||||| ||||| |    
T  23533652 -tgggatatatgtacccacttcgaacccatacccaaactcgtcccgaatgtaaaaaaatcaatttactaaccccttttgtataattagaaacccaaactc 23533750  T
Q  439 taaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttat 494  Q
    |||| |||||| |||||| ||||| | ||| | | ||||| |||||||||| ||||    
T  23533751 taaatcatttcactcacatagtcagagtctcagtgtttcagatgacactcatttat 23533806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 344 - 518
Target Start/End: Complemental strand, 3774111 - 3773937
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    |||||||||||||||||| |||||||||| ||||  ||| |  ||| ||||||||||||||||||||||||||||| || ||| ||| ||||| | |||     
T  3774111 ggatataggtacccaccctgaacccatactcaaatccgtcccgaatttagaaaatcaatttattaccccttttatataattaggaacccaaacgcaaaat 3774012  T
Q  444 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctttc 518  Q
    |||||  |||||||||||| | | | |   ||||||||||||| || ||||||||||| | || |||||||||||    
T  3774011 cattttactcacacagtcagagtttcagactttcatatgacacccatttatcatagttctatcttttctcctttc 3773937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 241 - 462
Target Start/End: Original strand, 19439958 - 19440180
Alignment:
Q  241 gcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaa 340  Q
    |||||||||| | | |||||| ||||||||||||| ||| |  |||||| |||||||||| |||||| ||||||| |||||||||||  |  |   ||||    
T  19439958 gcgggtaccctctcgaaccaaacccaatttgacgggttttccccgctttgactgggtttgagttttccctgatttgaaaacacgggtttgggatgggtaa 19440057  T
Q  341 ctgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa-tcaatttattaccccttttatagaaatagaaactcaaaccct 439  Q
      |||||||| ||||||||  ||||||||||||||||| ||| |  |||||| |||| ||||||||  ||||||||  || |||||||||| ||||| ||    
T  19440058 tggggatatatgtacccacttcgaacccatacccaaacccgtcccgaatgtaaaaaaatcaatttaccacccctttggtataaatagaaacccaaactct 19440157  T
Q  440 aaaccatttcgctcacacagtca 462  Q
    ||| |||||| |||||| |||||    
T  19440158 aaatcatttcactcacatagtca 19440180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 338 - 516
Target Start/End: Complemental strand, 3157131 - 3156953
Alignment:
Q  338 taactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaacc 437  Q
    |||| ||||||||||||||||| ||||||| |||||||||| ||| | |||  |||||||||||||||||||||||  |||| |||||||||| |||| |    
T  3157131 taacggggatataggtacccacaccgaacctatacccaaacccgtcccaaacatagaaaatcaatttattacccctactatataaatagaaacccaaatc 3157032  T
Q  438 ctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
    ||||| | |||| ||| |  ||||| | |||   | ||| | ||||||||||||||| |||||| |||| ||| |||||    
T  3157031 ctaaatcctttcactcgcgtagtcagagtcttggtcttttagatgacactcacttattatagttctctcttttttcctt 3156953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 294 - 458
Target Start/End: Complemental strand, 4101634 - 4101470
Alignment:
Q  294 gggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtag 393  Q
    ||||||||||||||  |||||| ||||||| |||||   |   || || |||||||| ||||||| || |||||||||||| ||| ||| || ||||| |    
T  4101634 gggtttgggttttccatgatttcaaaacacaggtacaggatgggttacagggatatatgtacccatcctgaacccataccctaacccgtcctgaatgttg 4101535  T
Q  394 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacaca 458  Q
    |||||||||||||||||  ||||||  ||||| ||||||||||||| || |||||| ||||||||    
T  4101534 aaaatcaatttattaccaattttatttaaataaaaactcaaacccttaatcatttcactcacaca 4101470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 454
Target Start/End: Original strand, 43550417 - 43550577
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    |||||||| |||||| | | ||||||||||| | ||||| ||  ||||  |||||||| |||| ||||| |||| ||||| ||||| ||| || |||||     
T  43550417 tgggtttgagttttccccgtttttaaaacacagatacgagactggtaatagggatatatgtactcaccc-gaactcatacacaaacccgtcctgaatgtg 43550515  T
Q  393 gaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctca 454  Q
    |||| || |||||||||||||| |||| |||||||||| ||||||||||| |||||| ||||    
T  43550516 gaaagtctatttattaccccttctatataaatagaaacccaaaccctaaatcatttcactca 43550577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 246 - 390
Target Start/End: Complemental strand, 24425520 - 24425376
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 345  Q
    |||| |||| |||||| ||||||||||||||||| || || ||| | ||||||||  ||||||||||||| |||||||||||| |  ||  ||||| ||     
T  24425520 taccagcccgaaccaaacccaatttgacggattttctccgttttgattgggtttgaattttctctgatttcaaaacacgggtatgggacgggtaacgggt 24425421  T
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatg 390  Q
    |||||||||||||||| || |||||  |||||| ||||| |||||    
T  24425420 atataggtacccaccctgaccccatttccaaacccgttccaaatg 24425376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 293 - 442
Target Start/End: Complemental strand, 29292797 - 29292646
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtac--ccaccccgaacccatacccaaactcgttctaaatg 390  Q
    ||||| ||| ||||| | ||||| ||||||||||||||| |   |||||  ||||||||||||  ||||||  |||||||||| ||||||||    ||||    
T  29292797 tgggtatggattttccccgatttcaaaacacgggtacgagatgggtaacatggatataggtacgcccaccctaaacccatacctaaactcgtctcgaatg 29292698  T
Q  391 tagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    ||||||||||||||| ||||||||||||| ||| |||||  |||||||||||    
T  29292697 tagaaaatcaatttactaccccttttatataaagagaaatccaaaccctaaa 29292646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 462
Target Start/End: Original strand, 23475226 - 23475433
Alignment:
Q  256 aaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtac 355  Q
    |||||| | ||||||||||| ||| |  |||||| ||||||||||||||||  | ||||| |||||||||||  |  |   ||||  |||||||| ||||    
T  23475226 aaccaaactcaatttgacgggttttccccgctttgactgggtttgggtttttcccgatttcaaaacacgggtttgggatgggtaatggggatatatgtac 23475325  T
Q  356 ccaccccgaacccatacccaaactcgttctaaatgtagaaaa-tcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctca 454  Q
    ||||  ||||||||||||||||| ||| |  |||||| |||| |||||||| ||||| |||| || ||||| |||| ||||| ||||| |||||| ||||    
T  23475326 ccacttcgaacccatacccaaacccgtcccgaatgtaaaaaaatcaatttactacccgttttgtataaataaaaacccaaactctaaatcatttcactca 23475425  T
Q  455 cacagtca 462  Q
    || |||||    
T  23475426 catagtca 23475433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 430
Target Start/End: Original strand, 8906589 - 8906727
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    |||||||| |||||||| ||||| |||||||| ||| || || | |||| ||| |||| |||||||||||||||||||| ||| ||  |||| |||||||    
T  8906589 tgggtttgagttttctccgatttcaaaacacgagtatgagacgaataacggggttatatgtacccaccccgaacccatatccatacctgttccaaatgta 8906688  T
Q  393 gaaaatcaatttattacccc-ttttatagaaatagaaac 430  Q
     ||||| | ||| ||||||| ||||||| ||||||||||    
T  8906689 aaaaattattttgttacccctttttatataaatagaaac 8906727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 516
Target Start/End: Original strand, 11472767 - 11472935
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacca 445  Q
    |||||||||| ||||  |||| ||||||||||  ||| | ||||| |||||||||||||||||  ||||||||| ||||||||||  |||||||||| ||    
T  11472767 atataggtactcacct-gaactcatacccaaatccgtcccaaatg-agaaaatcaatttattataccttttatataaatagaaaccaaaaccctaaatca 11472864  T
Q  446 tttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
    |||| |||||  ||| | | ||| | | ||| | |||||||||||||||||||||| |||| | |||||||    
T  11472865 tttcactcacgtagttagagtctcagtcttttagatgacactcacttatcatagttctctcttatctcctt 11472935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 516
Target Start/End: Complemental strand, 37218047 - 37217874
Alignment:
Q  343 gggatataggtacccaccccgaacccataccc-aaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaa 441  Q
    |||||||| ||||| | ||||||| ||||||| |||| ||| || ||| ||||||||||||| |||| | ||||| || ||||||||||||||  |||||    
T  37218047 gggatataagtaccaagcccgaactcataccccaaacccgtcctgaatatagaaaatcaatt-attatctcttttgtataaatagaaactcaatgcctaa 37217949  T
Q  442 accatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 516  Q
    | |||||  || ||||| ||| | |||   ||||||||||||||||||| |||||||||| |||| | |||||||    
T  37217948 atcattttactaacacaatcagagtctcggtttttcatatgacactcacatatcatagttctctcttctctcctt 37217874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 16866262 - 16866157
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| | |||||||||||| |  || |||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  16866262 tgggtatgggttttccccgatctcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 16866163  T
Q  393 gaaaat 398  Q
     |||||    
T  16866162 aaaaat 16866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 375
Target Start/End: Complemental strand, 10072559 - 10072477
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 375  Q
    ||||| ||||||||| | ||||| |||||||||||| | |||  ||||| || ||||||||||||||||||||||||||||||    
T  10072559 tgggtatgggttttccccgatttcaaaacacgggtatggaacgggtaacgggtatataggtacccaccccgaacccataccca 10072477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 383
Target Start/End: Complemental strand, 26623044 - 26622954
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgtt 383  Q
    ||||||||||||||| ||||||| |||||||||||| |  |   ||||  || ||||| ||||||||||||||||||||||||||||||||    
T  26623044 tgggtttgggttttccctgatttcaaaacacgggtatgggatgggtaatgggtatataagtacccaccccgaacccatacccaaactcgtt 26622954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 18825872 - 18825957
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||| | ||||| |||||||||||| |  ||  ||||| || ||||||||||||||||||||||| |||||||||    
T  18825872 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtacccaaac 18825957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 512
Target Start/End: Complemental strand, 31345525 - 31345400
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 486  Q
    |||||| |||||||||||| ||||  ||||||| |||||||||||||||| ||| | |||||| |||||||| ||| | ||| | |  || | |||||||    
T  31345525 aatgtaaaaaatcaatttactaccatttttatataaatagaaactcaaactctatatcatttcactcacacaatcaaagtctcagtcatttagatgacac 31345426  T
Q  487 tcacttatcatagttatctcatttct 512  Q
    |||||||||||| || |||| |||||    
T  31345425 tcacttatcataattctctcttttct 31345400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 32546285 - 32546200
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||| ||||  | ||||| |||| ||||||||| |||  ||||| |||||||| |||||||||||||||||||||||||||    
T  32546285 tgggtttggatttttcccgatttcaaaatacgggtacggaacgggtaacggggatatatgtacccaccccgaacccatacccaaac 32546200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 35074563 - 35074459
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||| |||||||||||||| |  ||  ||||| || ||||||||||||| ||||||||||||||||||| ||| | |||||||    
T  35074563 tgggtatgggttttccccgatcttaaaacacgggtatgggacgggtaacgggtatataggtacccaacccgaacccatacccaaacccgtcccaaatgta 35074464  T
Q  393 gaaaa 397  Q
     ||||    
T  35074463 aaaaa 35074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 377
Target Start/End: Complemental strand, 3920678 - 3920547
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 345  Q
    ||||| ||| |||||| |||||||||| || |||    || ||| ||||||||||||||||| | ||||| ||||||| |||| |  ||   |||| ||     
T  3920678 tacccacccgaaccaaacccaatttgatgggtttttcccgttttgactgggtttgggttttccccgatttcaaaacactggtatgggacggataacaggt 3920579  T
Q  346 atataggtacccaccccgaacccatacccaaa 377  Q
    ||||||||||||||||||||||||||||||||    
T  3920578 atataggtacccaccccgaacccatacccaaa 3920547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 492
Target Start/End: Original strand, 6557827 - 6557925
Alignment:
Q  394 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactt 492  Q
    ||||||| ||||||| || ||| |||||||||||| ||||||| ||||| |||||| |||||||| ||| | ||| | | ||||| |||||||||||||    
T  6557827 aaaatcagtttattatccttttcatagaaatagaatctcaaactctaaatcatttcactcacacaatcaaagtctcagtctttcagatgacactcactt 6557925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 27850326 - 27850431
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| ||  |||||||||||| ||||||||||||||||||| ||| |  ||||||    
T  27850326 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtgtataggtacccatcccgaacccatacccaaacccgtcccgaatgta 27850425  T
Q  393 gaaaat 398  Q
    ||||||    
T  27850426 gaaaat 27850431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 45380156 - 45380096
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || |||||||||||||||||||||||||||| |||||||| | ||||||| ||||    
T  45380156 gtaacgggtatataggtacccaccccgaacccatacctaaactcgtcccaaatgtaaaaaa 45380096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 3226946 - 3227025
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 372  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||||||||||||||||||||||||    
T  3226946 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccatac 3227025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 31426099 - 31426016
Alignment:
Q  295 ggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||| | ||||| |||| ||||||| || ||  ||||| |||||||| ||| ||||||||||| |||||||||||    
T  31426099 ggtttgggttttccccgatttaaaaatacgggtatgagacgggtaacggggatatatgtatccaccccgaacgcatacccaaac 31426016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 36251024 - 36251099
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtca 462  Q
    |||||||||||||||||||||||   ||||||| ||||| ||||| |||| |||||||||||| || | |||||||    
T  36251024 aatgtagaaaatcaatttattacatattttatataaataaaaactaaaactctaaaccatttcacttatacagtca 36251099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 48327532 - 48327449
Alignment:
Q  299 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 382  Q
    ||||||||||| ||||| |||| |||||||||  |  ||||| ||||||||||||| ||||| ||||| ||||| |||||||||    
T  48327532 tgggttttctccgatttcaaaatacgggtacggtatgagtaattgggatataggtatccacctcgaacacatactcaaactcgt 48327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 16079103 - 16079017
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 382  Q
    |||||||||||||| ||| | |||||||||||| |  ||  ||||| || |||||||| |||||||| |||| ||||||||||||||    
T  16079103 gtttgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtgcccaccccaaacctatacccaaactcgt 16079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 377
Target Start/End: Complemental strand, 5377175 - 5377094
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 377  Q
    |||||||||||| | ||||| ||||||| |||| |  ||  ||||  || ||||||||||||||||||||||||||||||||    
T  5377175 gtttgggttttccccgatttcaaaacacaggtatgggacgggtaaagggtatataggtacccaccccgaacccatacccaaa 5377094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 12980470 - 12980385
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||| ||||||| | ||||| |||||||||||| |  ||  ||||  || ||||| |||||||||||||||||||||||||||    
T  12980470 tgggttttggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataagtacccaccccgaacccatacccaaac 12980385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 17885558 - 17885453
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | |||||||||||| ||||| |  ||  ||||| || |||||||| || |||||||||||||||||| || ||| | |||||||    
T  17885558 tgggtatgggttttccccgattttaaaacatgggtatgggacgggtaacgggtatataggttccaaccccgaacccatacccatacccgtcccaaatgta 17885459  T
Q  393 gaaaat 398  Q
     |||||    
T  17885458 aaaaat 17885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 18684067 - 18683982
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||| |||||||| | ||||| |||| |||||||||  ||  ||||| |||||||| ||| ||||| |||||||||||||||||    
T  18684067 tgggttcgggttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatccacctcgaacccatacccaaac 18683982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 25782910 - 25782987
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacc 373  Q
    |||||||||||||| |||| ||||||||||||| || ||   |||  || ||||||||||||||||||||| ||||||    
T  25782910 gtttgggttttctccgattataaaacacgggtatgagacggataatgggtatataggtacccaccccgaactcatacc 25782987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 30650680 - 30650619
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||| || ||||||||||||||||||||||||||||||||  ||| | ||||||| |||||    
T  30650680 gtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaat 30650619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 38152980 - 38152875
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||||| |||||| ||||| | |||   |||| |  |||||||||||||||||||||||||||| |||| ||| | |||||||    
T  38152980 tgggtatgggttttccccgatttcaaaacatgggtatggaacggataacggctatataggtacccaccccgaacccatacctaaacccgtcccaaatgta 38152881  T
Q  393 gaaaat 398  Q
     |||||    
T  38152880 aaaaat 38152875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 41103749 - 41103644
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||   |||| || ||||| |||||||||||||||||||||  |||| ||| |||||||||    
T  41103749 tgggtatgggttttccccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaacccatacataaacccgtcctaaatgta 41103650  T
Q  393 gaaaat 398  Q
     |||||    
T  41103649 aaaaat 41103644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 392
Target Start/End: Original strand, 10995837 - 10995933
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    |||||||||||| | ||||| || ||||||||| |  ||  ||||| ||| ||||  ||||||||||||||||||||||| || ||||| |||||||    
T  10995837 gtttgggttttccccgatttcaagacacgggtatgggacgggtaacagggttatatatacccaccccgaacccatacccatacccgttccaaatgta 10995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 18125272 - 18125332
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||| | ||||||| ||||    
T  18125272 gtaacgggtatataggtacccaccccgaacgcatacccaaacccgtcccaaatgtaaaaaa 18125332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 21702708 - 21702648
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 397  Q
    ||||| || ||||||||||||||||||||||||||||| ||| ||| | ||||||| ||||    
T  21702708 gtaacgggtatataggtacccaccccgaacccataccccaacccgtcccaaatgtaaaaaa 21702648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 398
Target Start/End: Complemental strand, 43507532 - 43507433
Alignment:
Q  299 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    ||||||||| | ||||| |||||| ||||| || ||  ||||| || ||||||| |||||||| ||||||||||| | |||||| | ||||||| |||||    
T  43507532 tgggttttccccgatttcaaaacatgggtatgagacgggtaacgggtatataggcacccaccctgaacccatacctatactcgtcccaaatgtaaaaaat 43507433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 7780048 - 7780002
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    |||||||||||||||||||||| |||||||||| ||| | |||||||    
T  7780048 atataggtacccaccccgaacctatacccaaacccgtcccaaatgta 7780002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 2630574 - 2630658
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||||| | ||||| |||||| ||||| |  ||  || || || |||||| ||||||||||||||||||||||||||    
T  2630574 tgggtttgggttttccccgattt-aaaacatgggtatgggacgggtgacgggtatatagatacccaccccgaacccatacccaaac 2630658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 17852004 - 17851947
Alignment:
Q  246 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 303  Q
    ||||||||| |||||| |||||||||| |||||| || || ||| |||||||||||||    
T  17852004 tacccgcccgaaccaaacccaatttgatggattttctccgttttgactgggtttgggt 17851947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 22973481 - 22973396
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||||||   ||||| |||| |||||||||  ||  ||||  |||||||  ||||||||| |||||||||||||||||    
T  22973481 tgggtttgggttttccacgatttcaaaatacgggtacgggacgggtaatggggatatctgtacccacctcgaacccatacccaaac 22973396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 24903415 - 24903354
Alignment:
Q  388 atgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 449  Q
    ||||||||||  | ||| |||||||||||||| ||||| ||||| |||| ||||||||||||    
T  24903415 atgtagaaaactattttgttaccccttttatataaatataaactaaaacgctaaaccatttc 24903354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 378
Target Start/End: Complemental strand, 28309629 - 28309500
Alignment:
Q  249 ccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggata 348  Q
    ||||||||||||| ||| |||||| |  ||| | ||| |||  || |||||||||| || ||||||| |||| |||||||||  ||  ||||| || |||    
T  28309629 ccgcccaaaccaaccccgatttgatgagttttcctcgatttgtctaggtttgggttctccctgatttcaaaatacgggtacgggacgggtaacgggaata 28309530  T
Q  349 taggtacccaccccgaacccatacccaaac 378  Q
    || ||| | ||||||||| |||||||||||    
T  28309529 tatgtatctaccccgaactcatacccaaac 28309500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 40335734 - 40335811
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcaca 464  Q
    ||||||||||||||| ||||||||| ||||||| | ||||||| | ||| | | || |||||| |||| |||||||||    
T  40335734 aatgtagaaaatcaacttattaccctttttatatacatagaaaattaaagcatgaatcatttcactcatacagtcaca 40335811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 17851894 - 17851862
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||||||| |||||||||||||||||||    
T  17851894 atataggtacccatcccgaacccatacccaaac 17851862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 398
Target Start/End: Original strand, 37196051 - 37196103
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    |||||| ||||||||||||| |||||||||||| |||  |||||||| |||||    
T  37196051 atatagctacccaccccgaatccatacccaaacccgtcataaatgtaaaaaat 37196103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 37579311 - 37579271
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaa 377  Q
    ||||| || |||||||||||||||||||||| |||||||||    
T  37579311 gtaacgggtatataggtacccaccccgaacctatacccaaa 37579271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 350 - 378
Target Start/End: Original strand, 44794084 - 44794112
Alignment:
Q  350 aggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||||||||||||||||||||    
T  44794084 aggtacccaccccgaacccatacccaaac 44794112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 398
Target Start/End: Original strand, 45885818 - 45885870
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    |||||||||||||||||||||||||||| |||  ||| | ||||||| |||||    
T  45885818 atataggtacccaccccgaacccataccaaaatccgtcccaaatgtaaaaaat 45885870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 448
Target Start/End: Original strand, 48708656 - 48708759
Alignment:
Q  344 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 443  Q
    ||||||||||| ||||||  || |||||| |||||||||||  |||||  ||||| | |||| || |||||||||| |  |||||| ||||||||||||     
T  48708656 ggatataggtatccacccgaaatccatactcaaactcgttc-gaatgtgtaaaattactttagtaacccttttatatacttagaaattcaaaccctaaat 48708754  T
Q  444 cattt 448  Q
    |||||    
T  48708755 cattt 48708759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 211452 - 211365
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 380  Q
    ||||||||||||||||| ||||| |||| |||||||||| ||  ||||| |||||||| |||||||||||||||||||||||||||||    
T  211452 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactc 211365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 382
Target Start/End: Complemental strand, 33481 - 33392
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 382  Q
    ||||||||||||||| | ||||| |||||||||||| |  ||  ||||| || ||||| |||||||||||||||||||||||||||||||    
T  33481 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccaaactcgt 33392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 516
Target Start/End: Original strand, 4600 - 4803
Alignment:
Q  312 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 411  Q
    |||| |||| ||||||| |  ||| ||||| ||||||||| |||||||| |||||||||||| || |    | | ||||||||||||||| |||| ||||    
T  4600 atttcaaaatacgggtatgggacaggtaacagggatatagctacccaccacgaacccatacctaagccacct-tgaatgtagaaaatcaaattataaccc 4698  T
Q  412 cttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttc 511  Q
    |||||||| |||||||||   |||| ||||| |||||| |||||||||||| | ||    | ||| | || ||||||||||||||||||| |||| |||     
T  4699 cttttatataaatagaaatcaaaactctaaatcatttcactcacacagtcagagtcacggtcttttagataacactcacttatcatagttctctcttttt 4798  T
Q  512 tcctt 516  Q
    |||||    
T  4799 tcctt 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 14896 - 14790
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 442  Q
    |||||||  |||||||||| |||| ||||||||||| ||| || || ||| || ||||||||||| ||||||||||| ||||||||||| ||||  ||||    
T  14896 gggatattagtacccaccctgaactcatacccaaacccgtcctgaaggtaaaacatcaatttatttccccttttatataaatagaaacttaaacattaaa 14797  T
Q  443 ccatttc 449  Q
     ||||||    
T  14796 tcatttc 14790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 455
Target Start/End: Complemental strand, 1105 - 1037
Alignment:
Q  387 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcac 455  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||| | |||| |||||| |||||    
T  1105 aatgtagaaaattaatttattacccattttatataaatagaaactcaaatcttaaatcatttcactcac 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 454
Target Start/End: Original strand, 17499 - 17616
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaac 436  Q
    ||||| |||||||||||| ||| ||| ||||| || ||||||  || |  |||||| |||| | ||||||||||| ||||||| |||||||||| |||||    
T  17499 gtaacggggatataggtatccatcccaaacccttatccaaacatgtaccgaatgtataaaacccatttattacccattttatataaatagaaacgcaaac 17598  T
Q  437 cctaaaccatttcgctca 454  Q
    | |||| |||||| ||||    
T  17599 cataaatcatttcactca 17616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 378
Target Start/End: Complemental strand, 3054 - 2972
Alignment:
Q  296 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||||||| | ||||| |||| ||||||||   ||   ||||||||||||| ||||||||||||||||||||| |||||    
T  3054 gtttgggttttccccgatttcaaaatacgggtacaggacggataactgggatatatgtacccaccccgaacccatactcaaac 2972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 90685 - 90580
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 392  Q
    ||||| ||||||||| | ||||| |||||||||||| || ||   |||| || |||| ||||||| |||||||||||||| |||| |||| || |||| |    
T  90685 tgggtatgggttttccccgatttcaaaacacgggtatgagacggttaacgggtatattggtaccctccccgaacccatacacaaattcgtcctgaatgca 90586  T
Q  393 gaaaat 398  Q
    ||||||    
T  90585 gaaaat 90580  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 105513 - 105554
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  105513 gtaacagggatatatgtacccaccccgaacccatacccaaac 105554  T

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Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 128171 - 128206
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaac 378  Q
    |||||||| |||||||||||||||||||||||||||    
T  128171 gggatatatgtacccaccccgaacccatacccaaac 128206  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 398
Target Start/End: Complemental strand, 14810 - 14758
Alignment:
Q  346 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 398  Q
    |||||||||||||||  |||| ||||||||||||||| | |||||||||||||    
T  14810 atataggtacccaccttgaacacatacccaaactcgtcccaaatgtagaaaat 14758  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 20789 - 20854
Alignment:
Q  343 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 408  Q
    ||||||||  || ||||| ||||||||||| ||||| |||||  |||||| |||||||||||||||    
T  20789 gggatataaatatccacctcgaacccatactcaaacccgttccgaatgtaaaaaatcaatttatta 20854  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 55941 - 55982
Alignment:
Q  337 gtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||| |||||||| |||||||||||||| ||||||||||||    
T  55941 gtaacagggatatatgtacccaccccgaatccatacccaaac 55982  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 107443 - 107508
Alignment:
Q  345 gatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 410  Q
    |||||| ||||||||||||||| ||||  |||||||||||  ||||| |||||| | |||||||||    
T  107443 gatataagtacccaccccgaactcatattcaaactcgttccgaatgttgaaaattactttattacc 107508  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 67837 - 67752
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||| ||||| | |||||||||| |||| ||||  ||   |||| |||||||| ||||||||||||| || ||||||||||    
T  67837 tgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgtacccaccccgagcctatacccaaac 67752  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 75680 - 75595
Alignment:
Q  293 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 378  Q
    ||||||||| ||||| | |||||||||| |||| ||||  ||   |||| |||||||| ||||||||||||| || ||||||||||    
T  75680 tgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgtacccaccccgagcctatacccaaac 75595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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