View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11444_high_9 (Length: 327)

Name: NF11444_high_9
Description: NF11444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11444_high_9
NF11444_high_9
[»] chr5 (36 HSPs)
chr5 (16-327)||(38816628-38816932)
chr5 (117-192)||(19820428-19820503)
chr5 (37-166)||(22423764-22423895)
chr5 (125-192)||(22013364-22013431)
chr5 (118-192)||(42469171-42469245)
chr5 (118-167)||(15410483-15410532)
chr5 (118-170)||(6326332-6326384)
chr5 (69-194)||(37328829-37328955)
chr5 (69-153)||(3966492-3966577)
chr5 (119-177)||(15382442-15382500)
chr5 (120-153)||(6035472-6035505)
chr5 (35-84)||(8420075-8420124)
chr5 (117-170)||(21191090-21191143)
chr5 (125-192)||(2436878-2436939)
chr5 (37-89)||(9929668-9929720)
chr5 (117-153)||(17123037-17123073)
chr5 (126-170)||(21522722-21522766)
chr5 (126-170)||(21533288-21533332)
chr5 (117-153)||(27144452-27144488)
chr5 (117-192)||(6247572-6247647)
chr5 (69-153)||(11685928-11686012)
chr5 (117-160)||(14674251-14674294)
chr5 (117-160)||(19579683-19579726)
chr5 (118-177)||(21137654-21137713)
chr5 (117-160)||(34879332-34879375)
chr5 (118-160)||(5873548-5873590)
chr5 (35-65)||(24906250-24906280)
chr5 (118-148)||(27932229-27932259)
chr5 (117-151)||(28588708-28588742)
chr5 (124-170)||(36642803-36642849)
chr5 (117-166)||(19552577-19552626)
chr5 (119-192)||(30135264-30135336)
chr5 (115-144)||(32766975-32767004)
chr5 (117-177)||(13287433-13287493)
chr5 (117-153)||(31084312-31084348)
chr5 (69-153)||(41995460-41995543)
[»] chr7 (38 HSPs)
chr7 (118-192)||(27944991-27945065)
chr7 (118-192)||(24105629-24105702)
chr7 (67-149)||(29787354-29787435)
chr7 (117-170)||(11722132-11722185)
chr7 (69-179)||(24339605-24339716)
chr7 (86-167)||(19206025-19206107)
chr7 (69-153)||(32308109-32308194)
chr7 (37-147)||(11700798-11700909)
chr7 (117-177)||(1433419-1433479)
chr7 (37-197)||(7328639-7328805)
chr7 (121-192)||(2034392-2034462)
chr7 (117-168)||(2425767-2425818)
chr7 (117-192)||(43027503-43027578)
chr7 (118-177)||(43249958-43250017)
chr7 (117-159)||(8046061-8046103)
chr7 (86-153)||(22484014-22484082)
chr7 (117-159)||(23191879-23191921)
chr7 (117-167)||(26733279-26733329)
chr7 (74-148)||(30731031-30731104)
chr7 (77-150)||(11072290-11072362)
chr7 (119-168)||(49107795-49107844)
chr7 (117-153)||(20549780-20549816)
chr7 (117-156)||(2948669-2948708)
chr7 (69-153)||(6630897-6630982)
chr7 (117-160)||(21828439-21828482)
chr7 (118-149)||(28155563-28155594)
chr7 (117-191)||(598160-598233)
chr7 (118-168)||(5235960-5236010)
chr7 (69-135)||(9933282-9933347)
chr7 (117-159)||(20545270-20545312)
chr7 (119-177)||(26329418-26329476)
chr7 (119-168)||(4017830-4017879)
chr7 (36-65)||(17852091-17852120)
chr7 (120-153)||(25791642-25791675)
chr7 (117-169)||(11061110-11061162)
chr7 (37-65)||(15680900-15680928)
chr7 (117-177)||(17851396-17851456)
chr7 (117-153)||(22868031-22868067)
[»] chr6 (45 HSPs)
chr6 (69-170)||(10294079-10294181)
chr6 (117-177)||(9027143-9027203)
chr6 (117-192)||(853893-853968)
chr6 (69-177)||(16766662-16766771)
chr6 (117-177)||(5000660-5000720)
chr6 (37-177)||(5732474-5732604)
chr6 (124-192)||(8365560-8365628)
chr6 (118-190)||(12696277-12696348)
chr6 (37-167)||(8805524-8805656)
chr6 (69-177)||(9107355-9107464)
chr6 (117-168)||(9629357-9629408)
chr6 (117-192)||(30866178-30866253)
chr6 (118-192)||(6389693-6389767)
chr6 (117-167)||(9658854-9658904)
chr6 (117-155)||(19040339-19040377)
chr6 (124-192)||(3398569-3398637)
chr6 (117-177)||(7938081-7938141)
chr6 (118-166)||(13851712-13851760)
chr6 (118-177)||(7977865-7977924)
chr6 (117-160)||(20371144-20371187)
chr6 (74-177)||(34073337-34073441)
chr6 (117-170)||(426548-426601)
chr6 (117-158)||(7265627-7265668)
chr6 (117-169)||(8777007-8777059)
chr6 (117-177)||(34595099-34595159)
chr6 (37-84)||(426478-426525)
chr6 (117-160)||(17841623-17841666)
chr6 (86-169)||(31579229-31579311)
chr6 (118-192)||(25038106-25038180)
chr6 (117-191)||(31959111-31959184)
chr6 (35-65)||(34073276-34073306)
chr6 (37-78)||(2117134-2117175)
chr6 (117-150)||(10842524-10842557)
chr6 (73-167)||(26562664-26562759)
chr6 (117-153)||(677826-677862)
chr6 (119-192)||(4877890-4877965)
chr6 (117-193)||(7930254-7930330)
chr6 (117-153)||(7996412-7996448)
chr6 (117-153)||(8022353-8022389)
chr6 (117-153)||(10339160-10339196)
chr6 (117-169)||(16833281-16833333)
chr6 (117-153)||(17341698-17341734)
chr6 (118-150)||(21395342-21395374)
chr6 (117-153)||(21424836-21424872)
chr6 (69-153)||(34290064-34290147)
[»] chr8 (22 HSPs)
chr8 (69-170)||(22651948-22652050)
chr8 (69-175)||(29510289-29510396)
chr8 (124-192)||(25192388-25192456)
chr8 (117-183)||(926822-926888)
chr8 (117-170)||(27213519-27213572)
chr8 (124-192)||(126390-126457)
chr8 (117-192)||(13436998-13437073)
chr8 (117-160)||(31109552-31109595)
chr8 (117-179)||(24362236-24362298)
chr8 (117-150)||(39954313-39954346)
chr8 (117-157)||(31236611-31236651)
chr8 (84-160)||(37283812-37283887)
chr8 (117-192)||(4298920-4298994)
chr8 (117-192)||(11944615-11944690)
chr8 (117-179)||(4673459-4673521)
chr8 (117-151)||(27101506-27101540)
chr8 (117-159)||(34897068-34897110)
chr8 (74-192)||(11927076-11927195)
chr8 (117-150)||(13844630-13844663)
chr8 (117-177)||(2572090-2572150)
chr8 (117-169)||(20873042-20873094)
chr8 (69-165)||(29776013-29776108)
[»] chr2 (34 HSPs)
chr2 (81-192)||(21782817-21782927)
chr2 (128-192)||(33519736-33519800)
chr2 (117-192)||(20539708-20539783)
chr2 (86-177)||(4332891-4332981)
chr2 (117-167)||(21616737-21616787)
chr2 (119-192)||(19536434-19536507)
chr2 (120-193)||(23717976-23718048)
chr2 (120-193)||(24105648-24105720)
chr2 (86-144)||(1327976-1328033)
chr2 (69-167)||(36409614-36409711)
chr2 (92-177)||(18276486-18276570)
chr2 (126-191)||(21624217-21624282)
chr2 (37-150)||(19573970-19574078)
chr2 (69-142)||(44860320-44860394)
chr2 (67-155)||(18420417-18420506)
chr2 (37-84)||(19536361-19536408)
chr2 (117-152)||(37411278-37411313)
chr2 (117-191)||(38117193-38117261)
chr2 (119-193)||(14996260-14996333)
chr2 (38-84)||(18255945-18255991)
chr2 (118-193)||(21374734-21374810)
chr2 (87-177)||(28412315-28412404)
chr2 (117-175)||(31018557-31018615)
chr2 (38-84)||(34691770-34691816)
chr2 (38-84)||(34714182-34714228)
chr2 (72-193)||(2331743-2331863)
chr2 (118-179)||(4142875-4142936)
chr2 (118-159)||(21091706-21091747)
chr2 (117-153)||(896200-896236)
chr2 (118-166)||(10535794-10535842)
chr2 (117-169)||(30404884-30404936)
chr2 (117-149)||(31284041-31284073)
chr2 (37-73)||(42511322-42511358)
chr2 (118-150)||(42832311-42832343)
[»] scaffold0306 (1 HSPs)
scaffold0306 (117-193)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (37-192)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (117-193)||(21902-21978)
[»] chr1 (38 HSPs)
chr1 (117-169)||(6427323-6427375)
chr1 (117-177)||(40917716-40917776)
chr1 (117-176)||(398799-398858)
chr1 (117-169)||(2896155-2896207)
chr1 (38-184)||(10572535-10572690)
chr1 (118-193)||(5376535-5376609)
chr1 (117-192)||(5927374-5927449)
chr1 (37-90)||(48547938-48547991)
chr1 (117-161)||(12443494-12443538)
chr1 (117-153)||(17831565-17831601)
chr1 (117-153)||(36878450-36878486)
chr1 (78-170)||(1486703-1486796)
chr1 (77-177)||(38503285-38503386)
chr1 (35-138)||(44482234-44482343)
chr1 (124-179)||(48040503-48040558)
chr1 (92-170)||(1262856-1262933)
chr1 (117-167)||(9709795-9709845)
chr1 (117-167)||(34298411-34298461)
chr1 (118-192)||(39130802-39130876)
chr1 (117-153)||(19562655-19562691)
chr1 (118-153)||(609493-609528)
chr1 (117-160)||(6415035-6415078)
chr1 (117-192)||(31014993-31015068)
chr1 (117-160)||(46348417-46348460)
chr1 (118-169)||(48450622-48450673)
chr1 (119-153)||(3490426-3490460)
chr1 (117-151)||(10475011-10475045)
chr1 (117-183)||(15641064-15641130)
chr1 (115-153)||(40285686-40285724)
chr1 (117-170)||(20157384-20157437)
chr1 (117-150)||(21530681-21530714)
chr1 (69-147)||(25361881-25361960)
chr1 (118-147)||(41877505-41877534)
chr1 (69-150)||(9828036-9828118)
chr1 (117-177)||(10577769-10577829)
chr1 (124-160)||(18556497-18556533)
chr1 (86-150)||(25452152-25452215)
chr1 (132-192)||(34315663-34315722)
[»] chr3 (38 HSPs)
chr3 (117-192)||(8383207-8383282)
chr3 (80-179)||(5441029-5441128)
chr3 (67-156)||(8039818-8039908)
chr3 (118-177)||(24205076-24205135)
chr3 (126-192)||(8842280-8842346)
chr3 (96-161)||(5407261-5407325)
chr3 (117-177)||(28917966-28918026)
chr3 (118-177)||(4991002-4991061)
chr3 (124-183)||(10335327-10335386)
chr3 (69-192)||(25064859-25064981)
chr3 (117-192)||(55401025-55401100)
chr3 (117-191)||(8587055-8587129)
chr3 (118-168)||(9800014-9800064)
chr3 (117-191)||(32429414-32429488)
chr3 (117-169)||(2620087-2620139)
chr3 (117-177)||(15796328-15796388)
chr3 (117-169)||(26492239-26492291)
chr3 (121-160)||(21720746-21720785)
chr3 (35-73)||(4466538-4466576)
chr3 (35-65)||(5440965-5440995)
chr3 (117-167)||(12674535-12674585)
chr3 (35-73)||(13807237-13807275)
chr3 (119-193)||(14223889-14223962)
chr3 (119-160)||(3865592-3865633)
chr3 (119-160)||(12703989-12704030)
chr3 (96-149)||(34307794-34307846)
chr3 (117-177)||(3164059-3164119)
chr3 (117-153)||(4987325-4987361)
chr3 (117-153)||(6525714-6525750)
chr3 (124-160)||(10318075-10318111)
chr3 (119-191)||(14618732-14618804)
chr3 (117-161)||(14832080-14832124)
chr3 (117-153)||(21479107-21479143)
chr3 (118-150)||(25074781-25074813)
chr3 (117-153)||(26290360-26290396)
chr3 (117-169)||(26508083-26508135)
chr3 (37-73)||(27505334-27505370)
chr3 (117-153)||(40052321-40052357)
[»] scaffold0168 (3 HSPs)
scaffold0168 (37-183)||(21002-21149)
scaffold0168 (37-98)||(21217-21278)
scaffold0168 (37-98)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (117-177)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (118-177)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (69-177)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (118-159)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (67-152)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (117-189)||(178853-178925)
scaffold0018 (118-159)||(192284-192325)
[»] chr4 (21 HSPs)
chr4 (117-177)||(23293020-23293080)
chr4 (118-153)||(35723420-35723455)
chr4 (119-153)||(17345451-17345485)
chr4 (118-175)||(847918-847975)
chr4 (117-170)||(36635296-36635349)
chr4 (118-177)||(24343472-24343531)
chr4 (69-175)||(30982863-30982967)
chr4 (118-160)||(7012048-7012090)
chr4 (117-198)||(7670625-7670709)
chr4 (117-167)||(20521883-20521933)
chr4 (119-177)||(20633450-20633508)
chr4 (37-160)||(30298928-30299048)
chr4 (37-160)||(30327796-30327916)
chr4 (117-151)||(40613441-40613475)
chr4 (119-188)||(28084475-28084544)
chr4 (117-149)||(1747205-1747237)
chr4 (117-192)||(5775392-5775469)
chr4 (117-160)||(16184801-16184842)
chr4 (37-81)||(18844423-18844467)
chr4 (37-73)||(28470448-28470484)
chr4 (124-192)||(28720827-28720894)
[»] scaffold0652 (1 HSPs)
scaffold0652 (117-177)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (116-192)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (118-177)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (117-160)||(51793-51836)
[»] scaffold0697 (1 HSPs)
scaffold0697 (117-150)||(1636-1669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (80-162)||(28830-28913)
[»] scaffold0450 (1 HSPs)
scaffold0450 (37-65)||(8564-8592)
[»] scaffold0027 (2 HSPs)
scaffold0027 (117-169)||(46655-46707)
scaffold0027 (35-83)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 270; Significance: 1e-151; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 38816628 - 38816932
Alignment:
Q  16 tatcacgattcacgaatataactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatag 115  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38816628 tatcacgattcacgaatataactatgaatcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattatactgaaatatag 38816727  T
Q  116 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatggttaccgttcaattatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||||||||||    
T  38816728 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc-------ggagtccgtattagtgcttcatagtatatggttaccgttcaattatt 38816820  T
Q  216 ctattttctcaaattattgcttcaattcaagcaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 315  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816821 ctattttctcaaattattgcttcaattcaaacaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 38816920  T
Q  316 gactctctgttg 327  Q
    ||||||||||||    
T  38816921 gactctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 19820428 - 19820503
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  19820428 gattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatt 133  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | |||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  134 agcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    ||  ||||| | ||||||||||||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  125 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 42469245 - 42469171
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||||| | |||||||||||||| |||||||| ||||| ||| |||||| | ||||||||||||    
T  42469245 attttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 15410483 - 15410532
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  15410483 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 6326332 - 6326384
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||||||||||| ||||| ||||||||||||||| |||||| |||||||||    
T  6326332 attttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 37328829 - 37328955
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| ||||||||||||  ||||| | |||| | | | ||||||  ||||||||| || ||||||| || ||||| |||||| |||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaatttt-gtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T
Q  167 ccggagtccgtattcgtgcttcatagta 194  Q
     ||| |||||| | ||||||||||||||    
T  37328928 tcggtgtccgtgtccgtgcttcatagta 37328955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 3966577 - 3966492
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | ||||||||||||||||||||||||||||| |||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 15382500 - 15382442
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 6035505 - 6035472
Alignment:
Q  120 tttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  35 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 21191090 - 21191143
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  21191090 gattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccgg 21191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 2436939 - 2436878
Alignment:
Q  125 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||||||||||||||||      ||| ||||||||| |||||||| ||||||||||||    
T  2436939 caaattattagcggtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 89  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 17123073 - 17123037
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17123073 gattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 21522766 - 21522722
Alignment:
Q  126 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 21533332 - 21533288
Alignment:
Q  126 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 27144488 - 27144452
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||| |||||||||||||||||||||||||||||||    
T  27144488 gatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 6247647 - 6247572
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||||  |||||||||||||||| | |||  ||||||||| ||||| || |||| |||||||    
T  6247647 gattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcatag 6247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 11686012 - 11685928
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||| || |||||||||||||  |||| | | || ||| |||| |||||||||||||||||||||||||| |||||||    
T  11686012 tgtccgacaccga-acgacaccgacacatataattacactaaattat-gcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 14674294 - 14674251
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  14674294 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 19579726 - 19579683
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||    
T  19579726 gattttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 21137713 - 21137654
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||| ||||||| || ||||||||||||||| ||||||  |||||||| ||||||    
T  21137713 attttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 34879375 - 34879332
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||    
T  34879375 gattttctcaaatttttagcggtgccggcgtgtccgtatccgtg 34879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 5873548 - 5873590
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtg 5873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  35 aactatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 148
Target Start/End: Complemental strand, 27932259 - 27932229
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtg 148  Q
    |||||||||||||||||||||||||||||||    
T  27932259 attttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 28588708 - 28588742
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtca 151  Q
    |||||||||||||||||| ||||||||||||||||    
T  28588708 gattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 36642803 - 36642849
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 36642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 19552577 - 19552626
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||    
T  19552577 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 30135336 - 30135264
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||| ||||||||||||  ||||||||||||| ||||| ||| ||||||| | ||||||||  |||||||||||    
T  30135336 ttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc-gtgtccgtatatgtgcttcatag 30135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 32766975 - 32767004
Alignment:
Q  115 gcgattttctcaaattattagcggtgtcgg 144  Q
    ||||||||||||||||||||||||||||||    
T  32766975 gcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 13287433 - 13287493
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||| | |||||| ||||| ||| |||||| ||||||||| ||||||    
T  13287433 gattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgt 13287493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 31084348 - 31084312
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  31084348 gattttttcaaattattagctgtgtcggcgtgtcagt 31084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 41995543 - 41995460
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||| ||  ||||||||| |||||| | |||| ||| | |||||| || |||||||||  ||||||||||||||||    
T  41995543 tgtccgacaccgatacggcaccgacacttaattacattgaattat-gtgattttttcgaattattagttgtgtcggcgtgtcagt 41995460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 27945065 - 27944991
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27945065 attttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 29787354 - 29787435
Alignment:
Q  67 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 149  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | |||||||||||||||||||||||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 11722132 - 11722185
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  11722132 gattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||| | ||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  167 ccggagtccgtat 179  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  86 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||||||||||  ||||||||||| ||| | |||||||||||||||||||||||||||||||||  || |||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 32308194 - 32308109
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||||||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatta 134  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | |||||| |||||||||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  135 gcggtgtcggcgt 147  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 1433479 - 1433419
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||||||||||||||| |||||||||||||||| | |||||| ||||| ||| ||||||    
T  1433479 gattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 197
Target Start/End: Original strand, 7328639 - 7328805
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attataatgaaatatagcgattttctcaaat 129  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||| | | || ||| |  ||||||||||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattat-gttattttctcaaat 7328737  T
Q  130 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 197  Q
    ||||||| || ||| ||||| | | || ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328738 tattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

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Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  121 ttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 2425767 - 2425818
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  2425767 gattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 43027503 - 43027578
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||||| | |||| ||||||||| |||||| ||||||| | ||||| || ||||||||||||    
T  43027503 gattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 43250017 - 43249958
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||||||||| | |||||||||||||||| |||||| | ||||||| ||||||    
T  43250017 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 8046061 - 8046103
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 159  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  8046061 gattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 22484082 - 22484014
Alignment:
Q  86 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||  |||||| |||| ||| || ||||||| ||||||||||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 23191921 - 23191879
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 159  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  23191921 gattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 26733329 - 26733279
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||| |||||||||||||||||||| ||||||||| |||||| ||||||    
T  26733329 gattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  74 gacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtg 148  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | ||||||||||||||||| ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 11072362 - 11072290
Alignment:
Q  77 accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 150  Q
    |||||||| ||||||||||||||||||| |||| ||||    |||| ||||||||||| |||||||||||||||    
T  11072362 accgacacgacaccgacacataattatattgaattata-tatttttttcaaattattatcggtgtcggcgtgtc 11072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    |||||||||||||||||||||||||| |||||||  |||||| |||||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 20549816 - 20549780
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20549816 gattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 2948708 - 2948669
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatc 156  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  2948708 gattttctaaaattatcagcggtgtcggcgtgtcagtatc 2948669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 6630897 - 6630982
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||| |||| ||| |||||||||  |||| | |||| || || || |||||||||||||||| |||||||||||||||||    
T  6630897 tgtccgacaccaacacgacatcgacacatataattacactgaatta-agtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 21828439 - 21828482
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  21828439 gattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 149
Target Start/End: Complemental strand, 28155594 - 28155563
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgt 149  Q
    ||||||||||||||||||||||||||||||||    
T  28155594 attttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 598233 - 598160
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    |||||||| ||||||||||||||||||  |||||||| |||||| | |||| || ||||||  ||||||||||||    
T  598233 gattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgt-gtcgtgcttcata 598160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 5236010 - 5235960
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    ||||||| |||||||||||||||||| ||||||||| || ||| |||||||    
T  5236010 attttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 9933347 - 9933282
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattag 135  Q
    |||||||||||||||| |||| ||||||||| | || |||||||| | |||||| ||||||||||||    
T  9933347 tgtccgacaccgacacgacactgacacataagtttactgaaatat-gtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 20545270 - 20545312
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 159  Q
    |||||| |||||||||||||||||| |||||||| ||||||||    
T  20545270 gattttttcaaattattagcggtgttggcgtgtccgtatccgt 20545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 26329418 - 26329476
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||||||||||||| || ||||||||||||||| || ||| ||||||| | ||||||    
T  26329418 ttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgt 26329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 4017830 - 4017879
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    |||||||||||||||| | ||||||||||||| || |||||| |||||||    
T  4017830 ttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtcc 4017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 65
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  36 actatgaagcacggacactcctcgaattag 65  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 25791675 - 25791642
Alignment:
Q  120 tttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||| |||||||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagt 25791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 11061110 - 11061162
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| ||| ||||    
T  11061110 gattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccg 11061162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 15680928 - 15680900
Alignment:
Q  37 ctatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattag 15680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 17851456 - 17851396
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||||| |||||||||||||| |||  ||||| |||||| || ||||||||| ||||||    
T  17851456 gattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgt 17851396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 22868067 - 22868031
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||| |||||||| |||||||||||||||||    
T  22868067 gattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  167 ccgg 170  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 9027203 - 9027143
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9027203 gattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 853893 - 853968
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||    
T  853893 gattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||||| ||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  167 ccggagtccgt 177  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 5000660 - 5000720
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  5000660 gattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 136  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | |||||||||||||||||| |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  137 ggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||||||||| ||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||  |||||||||||||||| |||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 12696348 - 12696277
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcat 190  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| ||||||| | |||||||| ||||||||||    
T  12696348 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 8805524 - 8805656
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgac---accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatt 133  Q
    ||||||||||||||||||||||| ||||| ||||||| ||    | ||||| ||||||||||||||||| | | || ||| | |||||||||||||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattat-gtgattttctcaaattatt 8805622  T
Q  134 agcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    ||| ||| || |||||| || || ||| ||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | |||||| ||||||||||||| |||||||||||| ||| |||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  167 ccggagtccgt 177  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 9629408 - 9629357
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  9629408 gattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 30866178 - 30866253
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||||||||||||| || ||||| || || ||| | ||||||| |||||||||||| ||||||||    
T  30866178 gattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 6389767 - 6389693
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||||| | |||||||||||| ||| |||||| ||||||||| ||| || | ||||||||||||    
T  6389767 attttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 9658904 - 9658854
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  9658904 gattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 19040377 - 19040339
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtat 155  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040377 gattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||| |||||||||||||||| |||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 7938141 - 7938081
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || ||||||||| ||||||    
T  7938141 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 7977865 - 7977924
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||| | ||||||    
T  7977865 attttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 20371144 - 20371187
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  20371144 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  74 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 171  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | ||||||||||||||||||||| ||| ||| ||||||| |||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  172 gtccgt 177  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 426548 - 426601
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  426548 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 7265627 - 7265668
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccg 158  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  7265627 gattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 8777007 - 8777059
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||    
T  8777007 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 34595159 - 34595099
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||    
T  34595159 gattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 17841623 - 17841666
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  17841623 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 31579229 - 31579311
Alignment:
Q  86 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||| |||||| || ||| |||| ||| || ||||||||    
T  31579229 acaccgacacataattacactgaattat-gtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 25038106 - 25038180
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||||| |||||||  |||||||||||| ||| ||| | |   |||||||| ||||||||||||    
T  25038106 attttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgtgcttcatag 25038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 31959184 - 31959111
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    |||||| ||||||||||||| ||| |||||||||||| | |||| | ||||| | |||||||| |||||||||||    
T  31959184 gattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtcc-gtgtccgtatccgtgcttcata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  35 aactatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacac 78  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 10842557 - 10842524
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtc 150  Q
    |||||| |||||||||||||||||||||||||||    
T  10842557 gattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 26562759 - 26562664
Alignment:
Q  73 cgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||||||||| ||| |||||||||  |||| | |||| ||| | |||||||||||||| ||||| ||||||||||||| || | ||||| |||||    
T  26562759 cgacaccgacacgacatcgacacatataattacactgaattat-gtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtgcggtgtc 26562664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 677862 - 677826
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||| | ||||||||||||||||    
T  677862 gattttctcaaattattaacagtgtcggcgtgtcagt 677826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 4877965 - 4877890
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg--gagtccgtattcgtgcttcatag 192  Q
    |||| ||||||||||||| ||||||| |||||| |||||||| ||||| ||  | ||||||||  |||||||||||    
T  4877965 ttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgttcggcgtgtccgtatctgtgcttcatag 4877890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 7930330 - 7930254
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    |||||| |||||||||||   |||||||| ||||||| ||||| | |||||||| ||| |||| | |||||||||||    
T  7930330 gattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtctgtatccatgcttcatagt 7930254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 7996412 - 7996448
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||||| |||||||| |||||||    
T  7996412 gattttctcaaattattagcagtgtcggcatgtcagt 7996448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 8022389 - 8022353
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||||| |||||||| |||||||    
T  8022389 gattttctcaaattattagcagtgtcggcatgtcagt 8022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 10339160 - 10339196
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||| | |||||||||||||||||||    
T  10339160 gattttctcaaattaatcgcggtgtcggcgtgtcagt 10339196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 16833333 - 16833281
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| ||||||||||||  |||||||||||||||| || ||| ||||||||    
T  16833333 gattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 17341698 - 17341734
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  17341698 gattttatcaaattattaacggtgtcggcgtgtcagt 17341734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 21395342 - 21395374
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtc 150  Q
    |||||||||||||||||||||||| ||||||||    
T  21395342 attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 21424836 - 21424872
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||| |||||||||||||||||| |||||||||||    
T  21424836 gattttttcaaattattagcggtgttggcgtgtcagt 21424872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 34290064 - 34290147
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||| ||||| ||||| ||||||||||||||||| | |||| ||| | |||| || |||||||||||  |||||||| |||||||    
T  34290064 tgtcggacactgacacgacaccgacacataattacactgaattat-gtgattctcgcaaattattagttgtgtcggcatgtcagt 34290147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  167 ccgg 170  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  167 ccggagtcc 175  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 25192388 - 25192456
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 926822 - 926888
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 183  Q
    |||||||||||||||||||  |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 27213572 - 27213519
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  27213572 gattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||||||| |||||||||||||||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 13436998 - 13437073
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || | ||||||| |||| | | ||||||||||||    
T  13436998 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 31109552 - 31109595
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  31109552 gattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 24362236 - 24362298
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 179  Q
    |||| ||||||||||||||||||||||||||||| || || ||| ||| ||||| ||||||||    
T  24362236 gattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 39954313 - 39954346
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtc 150  Q
    ||||||||||||||||||||||||||||||||||    
T  39954313 gattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 31236611 - 31236651
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatcc 157  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  31236611 gattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  84 ccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||||||||| | |||| ||| | |||||||||| ||||||||||||| | || ||||||| ||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 4298920 - 4298994
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||| | |||||||||||| |||||| ||| ||||||| | |||| ||| ||||||||||||    
T  4298920 gattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc-gtgtccatatccgtgcttcatag 4298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 11944690 - 11944615
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||| | |||||||||||| || ||||||| |||||  || ||||||||  |||||||||||    
T  11944690 gattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtatctgtgcttcatag 11944615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 4673459 - 4673521
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 179  Q
    |||||| ||||||||||| | |||||||||||||||| || ||| ||||||||  ||||||||    
T  4673459 gattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtat 4673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 27101540 - 27101506
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtca 151  Q
    |||||| ||||||||||||||||||||||||||||    
T  27101540 gattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 34897110 - 34897068
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 159  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  34897110 gattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 11927076 - 11927195
Alignment:
Q  74 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 171  Q
    |||||| |||| |||||||||||||  |||| | |||| ||| | |||||| ||||||||||| | |||||||||| | || ||||||| |||||  ||     
T  11927076 gacaccaacacgacaccgacacatataattacactgaattat-gtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggt 11927174  T
Q  172 gtccgtattcgtgcttcatag 192  Q
    ||||||||  |||||||||||    
T  11927175 gtccgtatctgtgcttcatag 11927195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 13844630 - 13844663
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtc 150  Q
    |||||||||||||||||||| |||||||||||||    
T  13844630 gattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 2572090 - 2572150
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||||  |||||| |||||| ||||||||| ||||||| | ||||||    
T  2572090 gattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgt 2572150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 20873094 - 20873042
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| ||||||||||| |  ||||||||||||||| |||||| ||||||||    
T  20873094 gattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 29776108 - 29776013
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtg 165  Q
    |||||||||| |||   ||||||||| ||||||||| |||| ||  | |||||||||||||||||||| |||||| | ||||| | |||||| ||||    
T  29776108 tgtccgacactgacttaacaccgacatataattatactgaattac-gtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  81 acaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtatt 180  Q
    |||| |||||| |||||||||| | |||| ||| | |||||||||||||||||||| |||||||||||||||| |  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  181 cgtgcttcatag 192  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  128 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 20539708 - 20539783
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||||| |||||| ||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  20539708 gattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  86 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||||||||| | |||| ||| | ||||||| |||||||||| | |||||||| ||| |||||| ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 21616787 - 21616737
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  21616787 gattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 19536434 - 19536507
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  19536434 ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 23718048 - 23717976
Alignment:
Q  120 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 24105720 - 24105648
Alignment:
Q  120 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  86 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcgg 144  Q
    ||||||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | |||||| ||||||||| |||||||||||| ||| |||||||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 18276570 - 18276486
Alignment:
Q  92 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||| | |||| || || ||||||||||||||||||||||||||||| | ||||| || ||  ||||||||| ||||||    
T  18276570 acacataattacactgaatta-agtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  126 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    ||||||||||| |||||||||||||||| || ||| ||||| ||| |||||||| || ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 150
Target Start/End: Complemental strand, 19574078 - 19573970
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 136  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||  ||||     ||||||| | |||| ||| |  ||||||| ||||||||| |    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacacgccacc----tataattacactgaattat-gttattttcttaaattattatc 19573984  T
Q  137 ggtgtcggcgtgtc 150  Q
    ||||||||||||||    
T  19573983 ggtgtcggcgtgtc 19573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtc 142  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| ||||||||||||||||||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 18420417 - 18420506
Alignment:
Q  67 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtat 155  Q
    |||||||||||  ||||| ||||||||||  ||||||  | |||| ||| | |||||||||||||||||||| |||| |||||||||||||    
T  18420417 catgtccgacatggacacaacaccgacacttataattgcattgaattat-gtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 152
Target Start/End: Original strand, 37411278 - 37411313
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcag 152  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37411278 gattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 38117193 - 38117261
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    |||||| ||||||||||||| ||||||||||||||      ||| ||||||||| |||||||| |||||||||||    
T  38117193 gattttttcaaattattagctgtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatccgtgcttcata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 14996260 - 14996333
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    |||| ||||||||||||| |||||||| ||||||| |||||| | ||| | | |||||||| |||||||||||||    
T  14996260 ttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgtatccgtgcttcatagt 14996333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  38 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 21374734 - 21374810
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg--ccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||  | |||||| | |||||||| |||||||||||||    
T  21374734 attttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgcttcatagt 21374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 28412404 - 28412315
Alignment:
Q  87 caccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||||||||||||| | |||| ||| | |||||| ||||||||||| |||||| | ||||| ||| |||||| |||||| || ||||||    
T  28412404 caccgacacataattacactgaattat-gtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgt 28412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 31018615 - 31018557
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 175  Q
    |||||||| |||||||||||||||| ||||||||||| ||| || ||| ||||| ||||    
T  31018615 gattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  38 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  38 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 2331863 - 2331743
Alignment:
Q  72 ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 171  Q
    ||||||| ||||| |||||||||||||| || | |||| ||| | ||||||||||||||||||  |||||  |||||||| | |||||| || || ||      
T  2331863 ccgacactgacacgacaccgacacataaatacactgaattat-gtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcgcgttcgat 2331765  T
Q  172 gtccgtattcgtgcttcatagt 193  Q
    ||| || | |||||||||||||    
T  2331764 gtctgtgtccgtgcttcatagt 2331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 4142875 - 4142936
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 179  Q
    ||||||| ||||| |||| ||||||||||||||||| |||| | ||||| ||| ||||||||    
T  4142875 attttcttaaattgttagtggtgtcggcgtgtcagtgtccgggtcgtgttcggtgtccgtat 4142936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 21091747 - 21091706
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 159  Q
    ||||||| ||||||||||||||||||| |||||||| |||||    
T  21091747 attttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 896236 - 896200
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  896236 gattttctcaaactattagcagtgtcggcgtgtcagt 896200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 10535794 - 10535842
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    ||||||||||||||||| |||||||||||| | |||||| ||| |||||    
T  10535794 attttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgt 10535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 30404884 - 30404936
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| | ||||||    
T  30404884 gattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 31284073 - 31284041
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgt 149  Q
    |||||||||||||||||||| ||||||||||||    
T  31284073 gattttctcaaattattagcagtgtcggcgtgt 31284041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 42511322 - 42511358
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtcc 73  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 42832311 - 42832343
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtc 150  Q
    ||||||||||||||||||||||||||| |||||    
T  42832311 attttctcaaattattagcggtgtcggtgtgtc 42832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 13425 - 13349
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 20279 - 20122
Alignment:
Q  37 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaatta 131  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||||||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaatta 20183  T
Q  132 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||| |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  20182 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 21902 - 21978
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 6427375 - 6427323
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  6427375 gattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 40917776 - 40917716
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  40917776 gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 398799 - 398858
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccg 176  Q
    |||||| |||||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  398799 gattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 2896155 - 2896207
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  2896155 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 184
Target Start/End: Original strand, 10572535 - 10572690
Alignment:
Q  38 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaa 127  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  ||||| |  ||| ||| | |||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattat-gtgattttctcaa 10572633  T
Q  128 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtg 184  Q
    |||||||| ||||||||||||||||| | | || ||||||||| |||||||| ||||    
T  10572634 attattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 5376535 - 5376609
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    ||||||| |||||||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||| |||||||    
T  5376535 attttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 5927374 - 5927449
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||||| ||||  |||||||||| |||||| ||||||||| |||||||| ||||||| ||||    
T  5927374 gattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatag 5927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 90  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 12443494 - 12443538
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 161  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12443494 gattttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 17831565 - 17831601
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831565 gattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 36878486 - 36878450
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878486 gattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  78 ccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | |||||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  77 accgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtc 174  Q
    |||||||  |||||||||||||  |||| | |||||||||  |||||||||||||||||||||||||||| |||| ||| |||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  175 cgt 177  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 44482343 - 44482234
Alignment:
Q  35 aactatgaagcacggacactcctcgaattagc-----catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaa 127  Q
    ||||||| ||||||||||||||||| ||||||     | |||||||||||||||| ||||||||||  ||||||| | |||| ||| | |||||||||||    
T  44482343 aactatggagcacggacactcctcggattagctgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattat-gtgattttctcaa 44482245  T
Q  128 attattagcgg 138  Q
    ||||| |||||    
T  44482244 attataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 48040503 - 48040558
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 179  Q
    ||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 1262933 - 1262856
Alignment:
Q  92 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||| |||||||| |||| ||| | |||||||||||||||||||| ||||||||||||| || | |||| |||||||||    
T  1262933 acacttaattatattgaattat-gtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 9709845 - 9709795
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  9709845 gattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 34298461 - 34298411
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| ||||||    
T  34298461 gattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 39130802 - 39130876
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||| |||||||||   ||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  39130802 attttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 19562655 - 19562691
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 609493 - 609528
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||| |||||||||||||||||    
T  609493 attttctcaaattattagtggtgtcggcgtgtcagt 609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 6415035 - 6415078
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  6415035 gattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 31015068 - 31014993
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||||||||| |||| |||| ||||||  ||||| |||| |||| ||| || | ||||||||||||    
T  31015068 gattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgcttcatag 31014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 46348417 - 46348460
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  46348417 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 48450622 - 48450673
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||| ||||||||    
T  48450622 attttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 3490426 - 3490460
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||| ||||||||||||||||    
T  3490426 ttttctcaaattattagcagtgtcggcgtgtcagt 3490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 10475011 - 10475045
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtca 151  Q
    ||||||||||| |||||||||||||||||||||||    
T  10475011 gattttctcaagttattagcggtgtcggcgtgtca 10475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 15641064 - 15641130
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 183  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||| | ||||||  |||||| |||||    
T  15641064 gattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgttcgt 15641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 40285686 - 40285724
Alignment:
Q  115 gcgattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  40285686 gcgattttctcaaattattagcggtgttggtgtgtcagt 40285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 20157384 - 20157437
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||||||| ||||||||||||||||  ||||||||  ||||| |||||||||    
T  20157384 gattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccgg 20157437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 21530714 - 21530681
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtc 150  Q
    |||||||||||||||||| |||||||||||||||    
T  21530714 gattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 25361960 - 25361881
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgt 147  Q
    |||||||||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||| || |||||||||||    
T  25361960 tgtccgacaccgacacgacactgacacatataattacactgaattat-gtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 147
Target Start/End: Original strand, 41877505 - 41877534
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgt 147  Q
    ||||||||||||||||||||||||||||||    
T  41877505 attttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 9828118 - 9828036
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacataa--ttataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 150  Q
    |||| ||||| ||||| ||||||||||||||  ||| | |||| ||| | |||||| |||||||||||| ||||||||||||||    
T  9828118 tgtctgacacggacacgacaccgacacataaaattacactgaattat-gtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 10577769 - 10577829
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||||| |||  |||||| ||||||||||||| || |||||| ||||||||| ||||||    
T  10577769 gattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgt 10577829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 18556497 - 18556533
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  18556497 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 18556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 25452152 - 25452215
Alignment:
Q  86 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 150  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||||| |||| ||| ||||    
T  25452152 acaccgacacataattacactgaattat-gagattttctcaaattattagcagtgttggcatgtc 25452215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 34315722 - 34315663
Alignment:
Q  132 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||| |||||||| |||||||||||||| |||||||  | ||||||| ||||||||||||    
T  34315722 ttagctgtgtcggcatgtcagtatccgtgtcgtgtccata-tccgtatccgtgcttcatag 34315663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 8383282 - 8383207
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||| | |||||| | |||||| |||||    
T  8383282 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  80 gacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga-gtccgta 178  Q
    ||||| ||||||||||||||||  | |||| ||| | |||||||||||||| ||||||||| |||||||||||| || ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 8039818 - 8039908
Alignment:
Q  67 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatc 156  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   |||||||||||||||||||||||| ||||||||| ||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 24205076 - 24205135
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  24205076 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 8842346 - 8842280
Alignment:
Q  126 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842346 aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 5407261 - 5407325
Alignment:
Q  96 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 161  Q
    ||||||| |||||| ||| | |||||||||||||| ||||||||||||||||||| ||||||||||    
T  5407261 ataattacaatgaattat-gtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 28918026 - 28917966
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918026 gattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 4991002 - 4991061
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991002 attttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 10335327 - 10335386
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 183  Q
    ||||||||||||  |||||||||||||||| |||||| ||||||||| |||||| |||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | |||||| |||||| ||||||||||||||||||||| | || ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  169 ggagtccgtattcgtgcttcatag 192  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 55401100 - 55401025
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||||  |||||||||| ||||| |||||| ||| ||||| ||||||||  |||||||||||    
T  55401100 gattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 8587055 - 8587129
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    |||||| |||||||| |||  |||||||||||||||| |||||| | ||||||| ||||||||  ||||||||||    
T  8587055 gattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 9800064 - 9800014
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    |||||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  9800064 attttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 32429414 - 32429488
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    |||||||| |||||||||||| |||||| |||||| | | ||||  |||||||| |||||||| |||||||||||    
T  32429414 gattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 2620087 - 2620139
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| | ||||||||    
T  2620087 gattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 15796328 - 15796388
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||| ||||||    
T  15796328 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 26492239 - 26492291
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||    
T  26492239 gattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 21720785 - 21720746
Alignment:
Q  121 ttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  35 aactatgaagcacggacactcctcgaattagccatgtcc 73  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  35 aactatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 12674535 - 12674585
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||||||||||||||||| ||||||| |||||| | |||||| ||||||    
T  12674535 gattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtc 12674585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  35 aactatgaagcacggacactcctcgaattagccatgtcc 73  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 14223889 - 14223962
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    |||||||||||||||| | ||||||||||||| || || ||| ||||||| | ||| || |||||||||||||||    
T  14223889 ttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtcc-gtgtctgtgttcgtgcttcatagt 14223962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 3865592 - 3865633
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||| ||||||||||||| |||||||||||||||| ||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 3865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 12704030 - 12703989
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||||||| ||||||||||||||  ||||||||    
T  12704030 ttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 34307794 - 34307846
Alignment:
Q  96 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 149  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||| ||||||    
T  34307794 ataattacactgaaatat-gtgattttctcaaattattagcggtgtcagcgtgt 34307846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 3164059 - 3164119
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||||| |||||| |||| || | |||||| ||||||||| ||||||    
T  3164059 gattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgt 3164119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 4987325 - 4987361
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  4987325 gattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 6525714 - 6525750
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||||||||||||||| | |||||||    
T  6525714 gattttctcaaattattagcggtgtcgacatgtcagt 6525750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 10318075 - 10318111
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  10318075 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 10318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 14618804 - 14618732
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    |||||| |||||||||| |||||| |||| |||||  ||||| |||||| || |||||||  |||||||||||    
T  14618804 ttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtctggtgtccgtacccgtgcttcata 14618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 14832124 - 14832080
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 161  Q
    |||||| ||||||||||||| || |||||||||| ||||||||||    
T  14832124 gattttttcaaattattagctgtatcggcgtgtccgtatccgtgc 14832080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 21479143 - 21479107
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  21479143 gattttttcaaattattagctgtgtcggcgtgtcagt 21479107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 25074813 - 25074781
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtc 150  Q
    ||||||||||||||||| |||||||||||||||    
T  25074813 attttctcaaattattatcggtgtcggcgtgtc 25074781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 26290396 - 26290360
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||||||  |||||||||||||||||    
T  26290396 gattttctcaaattattaatggtgtcggcgtgtcagt 26290360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 26508135 - 26508083
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| ||||||||||||| ||||| ||||||||||||| ||  ||||||||    
T  26508135 gattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccg 26508083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 27505370 - 27505334
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtcc 73  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcc 27505334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 40052357 - 40052321
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  40052357 gattttttcaaattattagctgtgtcggcgtgtcagt 40052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatta 134  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | |||||||||||  ||||||  ||  ||| | ||||||||||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  135 gcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 183  Q
     | ||||| || ||||||| |||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 98  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 98  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 8823 - 8763
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  8823 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 225303 - 225362
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  225303 attttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 241668 - 241559
Alignment:
Q  69 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | ||||||  |||||||||||| |||||||||||||||| |||||| |||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattat-gtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 241570  T
Q  167 ccggagtccgt 177  Q
    |||| ||||||    
T  241569 ccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 92831 - 92790
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 159  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  92831 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  67 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcag 152  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | ||||||||||||||||| ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 178853 - 178925
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 189  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||| |||  ||| |||||||||    
T  178853 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 192284 - 192325
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 159  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 23293020 - 23293080
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  23293020 gattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 35723420 - 35723455
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 17345451 - 17345485
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||||||||||||||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagt 17345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 847975 - 847918
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 175  Q
    |||||||||||||||||||||  ||||||||||||| || ||| ||||||||| ||||    
T  847975 attttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 36635349 - 36635296
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| | |||||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 24343531 - 24343472
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||||||||| | ||||||||||||| |  |||||| ||||||||| ||||||    
T  24343531 attttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 30982863 - 30982967
Alignment:
Q  69 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||| ||||||||||| ||||||||||  ||||||| | |||||||| | ||||||||||||| |||||||||   |||||||| || |||||| ||| |    
T  30982863 tgtctgacaccgacacgacaccgacacttataattacactgaaatat-gtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtat 30982958  T
Q  167 ccggagtcc 175  Q
    |||| ||||    
T  30982959 ccggtgtcc 30982967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 7012090 - 7012048
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||||||| ||||||||||||||| || ||||||    
T  7012090 attttctcaaattattatcggtgtcggcgtgtcggtgtccgtg 7012048  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 7670709 - 7670625
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcg---tgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatg 198  Q
    |||||||||||| |||||||  ||||||||   ||||||| |||| | |||||||||  ||| ||||||||||||||| ||||||    
T  7670709 gattttctcaaactattagcaatgtcggcgacgtgtcagtttccgcgtcgtgtccggtatccatattcgtgcttcatactatatg 7670625  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 20521883 - 20521933
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||| ||||||||||| |||| ||||||||||||| |||||| ||||||    
T  20521883 gattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 20633508 - 20633450
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||| |||||||||||||||||||| ||||||||| |||||  |||||| || ||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgt 20633450  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 30299048 - 30298928
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 134  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30298954  T
Q  135 gcggtgtcggcgtgtcagtatccgtg 160  Q
    || |||||||||||||||| ||||||    
T  30298953 gctgtgtcggcgtgtcagtgtccgtg 30298928  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 30327916 - 30327796
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 134  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30327822  T
Q  135 gcggtgtcggcgtgtcagtatccgtg 160  Q
    || |||||||||||||||| ||||||    
T  30327821 gctgtgtcggcgtgtcagtgtccgtg 30327796  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 40613475 - 40613441
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtca 151  Q
    |||||||||||| ||||||||||||||||||||||    
T  40613475 gattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 28084544 - 28084475
Alignment:
Q  119 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttc 188  Q
    |||| ||||||| ||||| |||||||||||||||  || ||| ||||||||| ||||||||  |||||||    
T  28084544 ttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatctgtgcttc 28084475  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 1747237 - 1747205
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgt 149  Q
    ||||||||||| |||||||||||||||||||||    
T  1747237 gattttctcaatttattagcggtgtcggcgtgt 1747205  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 5775392 - 5775469
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagta---tccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||||||  |||||||  |||||||||   |||||| ||||||| | |||| ||||||||||||||||    
T  5775392 gattttctcaaattattaatggtgtcgt-gtgtcagtagtgtccgtgtcgtgtcctgtgtccatattcgtgcttcatag 5775469  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 16184842 - 16184801
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||||||||||||||||||  |||||||||||||| ||||||    
T  16184842 gattttctcaaattattagcg--gtcggcgtgtcagtgtccgtg 16184801  T

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Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 18844423 - 18844467
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccga 81  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtccgacaccga 18844467  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtcc 73  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 28720894 - 28720827
Alignment:
Q  124 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||| |||||||| ||||||| | |||| ||||||| | ||| |||| ||||||||||||    
T  28720894 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtcc-gtgtctgtatacgtgcttcatag 28720827  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 496 - 556
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| ||||||||||||| |||||||||| ||||| |||||| ||||| ||| ||||||    
T  496 gattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 17903 - 17979
Alignment:
Q  116 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||||||||||||||| |||||||  || |  ||  ||||||| | |||||||| ||||||||||||    
T  17903 cgattttctcaaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgtgcttcatag 17979  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 3340 - 3281
Alignment:
Q  118 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||| ||||| |||||  ||||| |||||||||||||||| ||||||||| ||||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgt 3281  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 51836 - 51793
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  51836 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

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Target: scaffold0697 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 1669 - 1636
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtc 150  Q
    |||||||||||||||||| |||||||||||||||    
T  1669 gattttctcaaattattaacggtgtcggcgtgtc 1636  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 28913 - 28830
Alignment:
Q  80 gacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgcc 162  Q
    ||||| |||||||||||||  |||| | |||| ||| |||||||||| ||||||||| |||||||||||||| ||| | ||||||    
T  28913 gacacaacaccgacacatataattacattgaattat-gcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtgcc 28830  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 65
Target Start/End: Original strand, 8564 - 8592
Alignment:
Q  37 ctatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||    
T  8564 ctatgaagcacggacactcctcgaattag 8592  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 46707 - 46655
Alignment:
Q  117 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||    
T  46707 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 46655  T

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Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 46778 - 46731
Alignment:
Q  35 aactatgaagcacggacactcctcgaattagccatgtccgacaccgaca 83  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt-cgacaccgaca 46731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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