View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11446_low_55 (Length: 270)
Name: NF11446_low_55
Description: NF11446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11446_low_55 |
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Alignment Details
Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 17 - 260
Target Start/End: Original strand, 21902819 - 21903062
Alignment:
| Q |
17 |
aaagtgtcgaacgaatagcaaacctcaaggtagcactgatgataaagtaagtgaccattataagtgaaaatttcaattctgtttcattttccttcacgaa |
116 |
Q |
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| T |
21902819 |
aaagtgtcgaacgaatagcaaacctcaaggtagcactgatgataaggtaagtgatcattataagtgaaaatttcaattctgtttcattttccttcacgaa |
21902918 |
T |
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| Q |
117 |
taagtcattgattatatatatgttgtgctcagaaactctcaagtaaaggagaaagaggtgtcttccgaaatatcaaagtatatcccttggtaattcattg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21902919 |
taagtcattgattatatatatgttgtgctcagaaactctcaagtaaaggagaaagaggtgtcttccgaaatatcaaagtatatcccttggtaattcattg |
21903018 |
T |
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| Q |
217 |
agagcatgtttattaattgaagtttctcatgtttgtcatctgtg |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21903019 |
agagcatgtttattaattgaagtttctcatgtttgtcatctgtg |
21903062 |
T |
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