View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11446_low_75 (Length: 213)

Name: NF11446_low_75
Description: NF11446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11446_low_75
NF11446_low_75
[»] chr7 (51 HSPs)
chr7 (133-200)||(134826-134893)
chr7 (133-200)||(772809-772876)
chr7 (122-200)||(35362789-35362867)
chr7 (133-200)||(28015723-28015790)
chr7 (16-126)||(8611407-8611517)
chr7 (16-126)||(40476928-40477038)
chr7 (129-200)||(15123684-15123755)
chr7 (133-200)||(18754061-18754128)
chr7 (133-200)||(19895365-19895432)
chr7 (133-200)||(21328979-21329046)
chr7 (133-200)||(26017339-26017406)
chr7 (133-200)||(38649039-38649106)
chr7 (133-200)||(47750100-47750167)
chr7 (130-200)||(8319678-8319748)
chr7 (16-126)||(49167146-49167256)
chr7 (133-201)||(29804359-29804427)
chr7 (133-197)||(33530159-33530223)
chr7 (133-200)||(7986258-7986325)
chr7 (133-200)||(30992505-30992571)
chr7 (133-200)||(35141344-35141411)
chr7 (141-200)||(37399972-37400031)
chr7 (129-200)||(37890171-37890242)
chr7 (133-200)||(39090454-39090521)
chr7 (133-200)||(40657975-40658042)
chr7 (133-200)||(43806831-43806898)
chr7 (133-179)||(5024758-5024804)
chr7 (138-200)||(16273752-16273814)
chr7 (16-126)||(23732176-23732286)
chr7 (16-126)||(40775488-40775598)
chr7 (130-200)||(47156748-47156818)
chr7 (133-200)||(25854893-25854959)
chr7 (131-188)||(32083598-32083655)
chr7 (16-104)||(134950-135038)
chr7 (24-104)||(29352455-29352535)
chr7 (133-200)||(8611304-8611371)
chr7 (133-200)||(11002209-11002276)
chr7 (19-126)||(33530258-33530365)
chr7 (133-200)||(34893473-34893540)
chr7 (137-188)||(41748220-41748271)
chr7 (133-200)||(46918765-46918832)
chr7 (133-200)||(49167291-49167358)
chr7 (134-188)||(2532308-2532362)
chr7 (16-126)||(22379492-22379602)
chr7 (126-196)||(28314298-28314368)
chr7 (142-200)||(42491077-42491135)
chr7 (16-57)||(7986113-7986154)
chr7 (86-126)||(14707873-14707913)
chr7 (86-126)||(22751693-22751733)
chr7 (86-126)||(46918690-46918730)
chr7 (25-57)||(47300536-47300568)
chr7 (86-126)||(47750025-47750065)
[»] chr2 (57 HSPs)
chr2 (133-200)||(25622725-25622792)
chr2 (16-126)||(44167494-44167604)
chr2 (133-200)||(12366234-12366301)
chr2 (130-200)||(26491664-26491734)
chr2 (16-126)||(36508150-36508260)
chr2 (133-200)||(3390789-3390856)
chr2 (133-200)||(9207037-9207104)
chr2 (133-188)||(15673662-15673717)
chr2 (133-200)||(25771811-25771878)
chr2 (16-126)||(15920095-15920205)
chr2 (16-126)||(25516713-25516823)
chr2 (135-200)||(11550347-11550412)
chr2 (132-188)||(5930788-5930844)
chr2 (133-188)||(9715237-9715292)
chr2 (133-200)||(13268938-13269005)
chr2 (133-200)||(27191014-27191081)
chr2 (133-200)||(27840828-27840895)
chr2 (133-200)||(34480331-34480398)
chr2 (16-123)||(38822293-38822400)
chr2 (16-126)||(3465150-3465260)
chr2 (133-200)||(4878415-4878484)
chr2 (16-126)||(28228443-28228553)
chr2 (16-126)||(43567094-43567204)
chr2 (130-188)||(43928993-43929051)
chr2 (132-188)||(2251041-2251097)
chr2 (140-188)||(19580695-19580743)
chr2 (134-198)||(35354007-35354071)
chr2 (133-200)||(3603351-3603418)
chr2 (133-200)||(5071051-5071118)
chr2 (133-200)||(15920240-15920307)
chr2 (141-200)||(18141162-18141221)
chr2 (133-200)||(19953904-19953971)
chr2 (133-200)||(37884019-37884086)
chr2 (16-126)||(3603206-3603316)
chr2 (130-203)||(3397657-3397730)
chr2 (129-170)||(14825923-14825964)
chr2 (137-197)||(3465299-3465359)
chr2 (130-198)||(6090252-6090320)
chr2 (86-126)||(11931163-11931203)
chr2 (133-188)||(13547173-13547228)
chr2 (23-126)||(18141264-18141367)
chr2 (133-188)||(27023832-27023887)
chr2 (129-200)||(28228584-28228655)
chr2 (133-200)||(40125751-40125818)
chr2 (133-200)||(41177224-41177291)
chr2 (130-188)||(16720541-16720599)
chr2 (16-126)||(17056252-17056362)
chr2 (16-126)||(17068699-17068809)
chr2 (137-187)||(44167405-44167455)
chr2 (65-126)||(17095269-17095330)
chr2 (86-127)||(34480256-34480297)
chr2 (14-126)||(8064570-8064682)
chr2 (86-126)||(9207139-9207179)
chr2 (86-126)||(15673751-15673791)
chr2 (86-126)||(25622827-25622867)
chr2 (86-126)||(37883944-37883984)
chr2 (133-161)||(41797976-41798004)
[»] chr1 (51 HSPs)
chr1 (129-200)||(34659322-34659393)
chr1 (133-200)||(8893658-8893725)
chr1 (133-200)||(33177279-33177346)
chr1 (126-200)||(900411-900484)
chr1 (16-126)||(34659424-34659534)
chr1 (136-200)||(49652204-49652268)
chr1 (133-200)||(15276127-15276194)
chr1 (133-200)||(33703191-33703258)
chr1 (133-200)||(44513683-44513750)
chr1 (133-200)||(46589514-46589581)
chr1 (130-200)||(11121339-11121409)
chr1 (133-200)||(630465-630532)
chr1 (133-188)||(5844497-5844552)
chr1 (133-188)||(13691456-13691511)
chr1 (133-200)||(13969321-13969388)
chr1 (133-188)||(18343984-18344039)
chr1 (133-188)||(23257454-23257509)
chr1 (133-200)||(38644478-38644545)
chr1 (133-188)||(40992664-40992719)
chr1 (133-200)||(45659380-45659447)
chr1 (16-126)||(21326694-21326804)
chr1 (134-200)||(38646951-38647017)
chr1 (16-126)||(45659235-45659345)
chr1 (19-112)||(8893517-8893609)
chr1 (18-74)||(900316-900372)
chr1 (132-200)||(26771471-26771539)
chr1 (126-198)||(32538888-32538960)
chr1 (17-125)||(47392358-47392466)
chr1 (133-200)||(12147729-12147796)
chr1 (141-200)||(12967414-12967473)
chr1 (133-200)||(14716957-14717024)
chr1 (133-200)||(15698564-15698631)
chr1 (133-200)||(22344593-22344660)
chr1 (133-200)||(34567047-34567114)
chr1 (133-188)||(44562442-44562497)
chr1 (16-126)||(6212697-6212807)
chr1 (16-126)||(13969423-13969533)
chr1 (16-126)||(26771327-26771437)
chr1 (16-104)||(22344717-22344805)
chr1 (86-126)||(33177381-33177421)
chr1 (16-104)||(47551316-47551404)
chr1 (133-188)||(6212607-6212662)
chr1 (133-188)||(28213419-28213474)
chr1 (133-200)||(52839896-52839963)
chr1 (16-126)||(15698419-15698529)
chr1 (16-126)||(44513785-44513895)
chr1 (131-160)||(45750857-45750886)
chr1 (86-126)||(2350913-2350953)
chr1 (133-189)||(21326871-21326927)
chr1 (86-126)||(33703293-33703333)
chr1 (156-200)||(42491279-42491323)
[»] chr6 (24 HSPs)
chr6 (16-126)||(5417007-5417117)
chr6 (133-200)||(4663501-4663568)
chr6 (133-200)||(11426311-11426378)
chr6 (19-126)||(20496417-20496524)
chr6 (133-200)||(20496559-20496626)
chr6 (133-188)||(31748323-31748378)
chr6 (130-200)||(10744945-10745015)
chr6 (130-200)||(12576162-12576232)
chr6 (133-200)||(23843105-23843172)
chr6 (133-200)||(34020969-34021036)
chr6 (16-126)||(7049466-7049576)
chr6 (16-126)||(12576264-12576374)
chr6 (133-201)||(16913694-16913762)
chr6 (149-200)||(5545062-5545113)
chr6 (133-200)||(8632877-8632944)
chr6 (133-188)||(8644594-8644649)
chr6 (137-188)||(19760158-19760209)
chr6 (133-200)||(20845379-20845446)
chr6 (16-126)||(32804516-32804626)
chr6 (86-126)||(8644519-8644559)
chr6 (86-126)||(10744873-10744913)
chr6 (86-126)||(12651984-12652024)
chr6 (86-126)||(16913616-16913656)
chr6 (86-126)||(31748248-31748288)
[»] chr3 (46 HSPs)
chr3 (16-126)||(22286534-22286644)
chr3 (133-200)||(1165077-1165144)
chr3 (19-126)||(21586123-21586230)
chr3 (134-189)||(34767345-34767400)
chr3 (133-200)||(43030049-43030116)
chr3 (133-200)||(43839198-43839265)
chr3 (133-200)||(45664587-45664654)
chr3 (130-188)||(21803894-21803952)
chr3 (16-126)||(28995092-28995202)
chr3 (130-188)||(46926767-46926825)
chr3 (16-104)||(31628755-31628843)
chr3 (129-200)||(39340557-39340628)
chr3 (133-188)||(40797399-40797454)
chr3 (126-200)||(4019957-4020031)
chr3 (16-126)||(33076506-33076616)
chr3 (133-200)||(10977609-10977676)
chr3 (133-200)||(22844418-22844485)
chr3 (133-188)||(29182303-29182358)
chr3 (133-188)||(29776383-29776438)
chr3 (133-200)||(32237677-32237744)
chr3 (133-188)||(42106504-42106559)
chr3 (16-126)||(3088447-3088557)
chr3 (130-200)||(37051961-37052031)
chr3 (22-126)||(39340426-39340530)
chr3 (133-185)||(43243174-43243226)
chr3 (133-188)||(3088357-3088412)
chr3 (133-200)||(25939177-25939244)
chr3 (133-188)||(27831465-27831519)
chr3 (133-180)||(28995010-28995057)
chr3 (133-200)||(33076651-33076718)
chr3 (19-126)||(50460414-50460521)
chr3 (126-188)||(2598437-2598498)
chr3 (16-126)||(20200841-20200951)
chr3 (133-187)||(22286445-22286499)
chr3 (67-125)||(29776474-29776532)
chr3 (126-188)||(30293158-30293220)
chr3 (16-126)||(50520004-50520114)
chr3 (133-178)||(913019-913064)
chr3 (135-200)||(11846916-11846981)
chr3 (133-170)||(21586265-21586302)
chr3 (13-110)||(26412508-26412605)
chr3 (65-126)||(34767256-34767317)
chr3 (86-126)||(913099-913139)
chr3 (86-126)||(20203023-20203063)
chr3 (22-126)||(32237779-32237883)
chr3 (156-200)||(48401502-48401546)
[»] chr4 (60 HSPs)
chr4 (130-200)||(15729662-15729732)
chr4 (133-200)||(4634649-4634716)
chr4 (133-200)||(9662219-9662286)
chr4 (133-200)||(14346797-14346864)
chr4 (133-200)||(14542193-14542260)
chr4 (133-188)||(43157143-43157198)
chr4 (130-200)||(23067529-23067599)
chr4 (130-188)||(34668549-34668607)
chr4 (133-197)||(23926407-23926471)
chr4 (133-200)||(30416308-30416376)
chr4 (16-124)||(42972259-42972367)
chr4 (133-188)||(2945504-2945559)
chr4 (133-188)||(7242479-7242534)
chr4 (133-188)||(16992238-16992293)
chr4 (133-200)||(29474009-29474076)
chr4 (133-200)||(38434964-38435031)
chr4 (133-200)||(41486940-41487007)
chr4 (133-188)||(46728613-46728668)
chr4 (133-200)||(53903945-53904012)
chr4 (16-126)||(30469906-30470016)
chr4 (16-126)||(46716677-46716787)
chr4 (23-126)||(1657349-1657452)
chr4 (141-188)||(3169751-3169798)
chr4 (133-188)||(12519985-12520040)
chr4 (133-200)||(23002614-23002680)
chr4 (133-188)||(30469816-30469871)
chr4 (129-200)||(38545834-38545905)
chr4 (133-188)||(40861304-40861359)
chr4 (133-188)||(42972404-42972459)
chr4 (122-196)||(26625442-26625516)
chr4 (16-126)||(31601139-31601249)
chr4 (16-126)||(46728703-46728813)
chr4 (130-200)||(50981395-50981465)
chr4 (131-188)||(10680699-10680756)
chr4 (131-188)||(10894339-10894396)
chr4 (141-188)||(1645297-1645344)
chr4 (133-200)||(3673854-3673921)
chr4 (141-188)||(9474231-9474278)
chr4 (133-188)||(19885659-19885714)
chr4 (129-188)||(22066749-22066808)
chr4 (133-200)||(29576802-29576869)
chr4 (133-200)||(29589042-29589109)
chr4 (133-200)||(33020608-33020675)
chr4 (141-200)||(44374956-44375015)
chr4 (133-200)||(50002874-50002941)
chr4 (133-200)||(54420421-54420488)
chr4 (134-200)||(4959255-4959321)
chr4 (16-126)||(4959357-4959467)
chr4 (16-102)||(54420547-54420633)
chr4 (143-200)||(9549808-9549865)
chr4 (131-188)||(10715988-10716045)
chr4 (131-188)||(10929758-10929815)
chr4 (15-76)||(18995506-18995567)
chr4 (17-126)||(34115439-34115548)
chr4 (16-57)||(44021433-44021474)
chr4 (144-188)||(4622397-4622441)
chr4 (86-126)||(14346722-14346762)
chr4 (86-126)||(23002715-23002755)
chr4 (86-126)||(29576904-29576944)
chr4 (133-169)||(40913477-40913513)
[»] chr8 (44 HSPs)
chr8 (130-198)||(26538747-26538815)
chr8 (133-200)||(9993032-9993099)
chr8 (133-200)||(12248392-12248459)
chr8 (133-200)||(16937953-16938020)
chr8 (16-126)||(12243999-12244109)
chr8 (126-200)||(15665900-15665974)
chr8 (16-126)||(37129458-37129568)
chr8 (127-200)||(37659220-37659293)
chr8 (22-126)||(16809090-16809194)
chr8 (133-200)||(5457437-5457504)
chr8 (133-200)||(9270386-9270453)
chr8 (133-200)||(32413156-32413223)
chr8 (133-200)||(41996909-41996976)
chr8 (133-200)||(44295682-44295749)
chr8 (142-200)||(13977785-13977843)
chr8 (133-200)||(31712755-31712824)
chr8 (130-199)||(1215023-1215092)
chr8 (140-188)||(10043143-10043191)
chr8 (133-200)||(8054489-8054556)
chr8 (133-200)||(12243897-12243964)
chr8 (133-200)||(16937020-16937087)
chr8 (122-188)||(27989044-27989111)
chr8 (122-188)||(28046346-28046413)
chr8 (133-200)||(32104518-32104585)
chr8 (133-188)||(32256414-32256469)
chr8 (133-188)||(37720206-37720260)
chr8 (16-126)||(12248494-12248604)
chr8 (16-126)||(18196929-18197039)
chr8 (16-126)||(44295537-44295647)
chr8 (124-200)||(5328306-5328380)
chr8 (133-197)||(23970866-23970931)
chr8 (131-185)||(2629276-2629331)
chr8 (129-188)||(7269159-7269218)
chr8 (65-112)||(9799808-9799855)
chr8 (133-200)||(18190532-18190599)
chr8 (16-51)||(31147686-31147721)
chr8 (16-126)||(8054591-8054700)
chr8 (16-126)||(37720061-37720171)
chr8 (134-195)||(283697-283757)
chr8 (134-195)||(632120-632180)
chr8 (134-195)||(817932-817992)
chr8 (86-126)||(2629201-2629241)
chr8 (86-126)||(5989904-5989944)
chr8 (130-188)||(36545475-36545532)
[»] scaffold0024 (1 HSPs)
scaffold0024 (133-200)||(36890-36957)
[»] chr5 (38 HSPs)
chr5 (133-200)||(29310035-29310102)
chr5 (133-200)||(31646195-31646262)
chr5 (130-200)||(40564838-40564908)
chr5 (134-200)||(40775128-40775194)
chr5 (135-200)||(28662438-28662503)
chr5 (133-196)||(3495212-3495275)
chr5 (133-200)||(5378668-5378735)
chr5 (133-200)||(6886859-6886926)
chr5 (133-200)||(28618968-28619035)
chr5 (133-200)||(41358400-41358467)
chr5 (134-188)||(28501056-28501110)
chr5 (16-126)||(28618823-28618933)
chr5 (130-187)||(8957569-8957626)
chr5 (122-186)||(6647608-6647672)
chr5 (133-201)||(37219369-37219436)
chr5 (137-197)||(41554857-41554917)
chr5 (133-200)||(6074417-6074484)
chr5 (133-200)||(14910357-14910424)
chr5 (133-200)||(17325345-17325412)
chr5 (133-188)||(34844282-34844337)
chr5 (133-200)||(34874216-34874283)
chr5 (16-118)||(4070772-4070874)
chr5 (17-126)||(28388891-28389000)
chr5 (133-200)||(10923815-10923882)
chr5 (133-200)||(15710910-15710977)
chr5 (133-200)||(17218090-17218156)
chr5 (133-188)||(18472419-18472474)
chr5 (133-200)||(19645718-19645784)
chr5 (141-200)||(20271089-20271148)
chr5 (133-200)||(33486250-33486317)
chr5 (133-200)||(35906635-35906702)
chr5 (130-200)||(2415765-2415835)
chr5 (130-188)||(8811845-8811903)
chr5 (147-197)||(9034629-9034679)
chr5 (16-126)||(35906490-35906600)
chr5 (16-126)||(41554708-41554818)
chr5 (86-126)||(8811935-8811975)
chr5 (86-126)||(34844207-34844247)
[»] scaffold0045 (2 HSPs)
scaffold0045 (16-126)||(9441-9551)
scaffold0045 (130-200)||(1602-1672)
[»] scaffold1294 (1 HSPs)
scaffold1294 (19-126)||(999-1106)
[»] scaffold0432 (1 HSPs)
scaffold0432 (133-200)||(2115-2182)
[»] scaffold0316 (1 HSPs)
scaffold0316 (133-188)||(11896-11951)
[»] scaffold0157 (1 HSPs)
scaffold0157 (133-188)||(871-926)
[»] scaffold0536 (1 HSPs)
scaffold0536 (133-200)||(3276-3349)
[»] scaffold0009 (1 HSPs)
scaffold0009 (134-200)||(105413-105479)
[»] scaffold0722 (1 HSPs)
scaffold0722 (139-200)||(5207-5268)
[»] scaffold0012 (1 HSPs)
scaffold0012 (16-56)||(244857-244897)
[»] scaffold0011 (1 HSPs)
scaffold0011 (132-188)||(11376-11432)


Alignment Details
Target: chr7 (Bit Score: 52; Significance: 5e-21; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 134893 - 134826
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||||||    
T  134893 attcatcctttttgtttttagcaaatttacattatatcgatgtactctatcaatttgaatgaatgaat 134826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 772809 - 772876
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| || ||||||||    
T  772809 attcatcctttttgtttttagcgaatttgcattgtatcgatgtactctatcaatttaaatgaatgaat 772876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 35362867 - 35362789
Alignment:
Q  122 tttatttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| ||| |||||||||||||||||||||| ||||| |||||||||||  |||||||||||||| || ||||||||    
T  35362867 tttattcgcagattcatcctttttgtttttagcgaatttgcattgtatcgatatactctatcaatttaaatgaatgaat 35362789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 28015723 - 28015790
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||| || ||||||||    
T  28015723 attcatcctttttgtttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaat 28015790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 8611517 - 8611407
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||| |||||  |||| ||||||||| |||||  |||| |||| |||| || ||| ||  |||||||||||||||||||  |||||| ||    
T  8611517 cagatccaatcaataactttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtaggtatttgtactt 8611418  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  8611417 tgccgttttat 8611407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 40476928 - 40477038
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| |||||||||||||||  ||||||||  |||| |  ||| ||  ||||||| ||||||||||   |||||| ||    
T  40476928 cagatccaatcaatgactttgacgtcatccacgttgtagatccggaaatatgattattccggagatttaaatatagtaatatgtgtagacatttgtactt 40477027  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  40477028 tgccgttttat 40477038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 15123755 - 15123684
Alignment:
Q  129 gcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||| |||||||||||||||||||| | |||||| ||  |||||||||||||| || ||||||||    
T  15123755 gcaaattcatcatttttgtttttagcaaatttgctttgtattgatctactctatcaatttgaatgaatgaat 15123684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 18754061 - 18754128
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||| ||||||| || ||||||||    
T  18754061 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaat 18754128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 19895432 - 19895365
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||| | ||||||||||||||| || ||||||||    
T  19895432 attcatcctttttgtttttagcgaatttgcattatatcaatgtactctatcaatttgaatgaatgaat 19895365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 21329046 - 21328979
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| |||||  |||| ||||| ||||||||||||||| || ||||||||    
T  21329046 attcatcctttttgtttttagcgaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 21328979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 26017406 - 26017339
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||  |||||| ||| |||||| ||||||||||||||| || ||||||||    
T  26017406 attcatcctttttgtttttagtgaatttatattatatcgatgtactctatcaatttgaatgaatgaat 26017339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 38649106 - 38649039
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||  ||||| || ||||||||    
T  38649106 attcatcctttttgtttttagcgaattttcattgtatcgatgtactctactaatttgaatgaatgaat 38649039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 47750100 - 47750167
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||  |||||||||| |||||||||| |||||| ||||||||||||||| || ||||||||    
T  47750100 attcatccttgatgtttttagcgaatttacattatatcgatgtactctatcaatttgaatgaatgaat 47750167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 8319678 - 8319748
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||| |||||||||||||| ||||| || | |||||| ||||||||||||||| || ||||||||    
T  8319678 caaattcatcatttttgtttttagcgaatttgcactatatcgatgtactctatcaatttaaatgaatgaat 8319748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 49167146 - 49167256
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||| |||||||||||||  |||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  49167146 cagatctaatcaatgactttagcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactt 49167245  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  49167246 tgccgttttat 49167256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 29804427 - 29804359
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaatt 201  Q
    ||||||| |||||||||||||| |||||  ||| |||||| ||||||||||||||| || |||||||||    
T  29804427 attcatcatttttgtttttagcgaatttgtattatatcgatgtactctatcaatttgaatgaatgaatt 29804359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 33530223 - 33530159
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatg 197  Q
    |||||||  ||||||||||||| ||||||||||||||| | ||||||||||||||| || |||||    
T  33530223 attcatctcttttgtttttagcgaatttacattgtatcaatgtactctatcaatttgaatgaatg 33530159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 7986258 - 7986325
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| ||||||||||||||||||||  ||| ||||||  |||||||||||||| || ||||||||    
T  7986258 attcatcttttttgtttttagcaaatttgtattatatcgatctactctatcaatttgaatgaatgaat 7986325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 30992571 - 30992505
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||| ||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  30992571 attcatcctttt-gtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 30992505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 35141411 - 35141344
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| |||| ||| ||||| ||||||||||| ||||||||||| ||| || ||||||||    
T  35141411 attcatcctttttattttaagcgaatttgcattgtatcgatgtactctatcagtttaaatgaatgaat 35141344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 37399972 - 37400031
Alignment:
Q  141 tttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||| |||||||||| ||||||  |||||||||||||| || ||||||||    
T  37399972 tttttgtttttagcgaatttacattatatcgatatactctatcaatttgaatgaatgaat 37400031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 37890242 - 37890171
Alignment:
Q  129 gcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||| | |||||||||| | ||||| ||||||||||| ||||| ||||||||| || ||||||||    
T  37890242 gcaaattcatcttatttgtttttaacgaatttgcattgtatcgatgtactatatcaatttgaatgaatgaat 37890171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 39090454 - 39090521
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| ||||| | ||||||| ||||||| ||||||||| || ||||||||    
T  39090454 attcatcatttttgtttttagcgaattttccttgtatcaacgtactttatcaatttgaatgaatgaat 39090521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 40657975 - 40658042
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| ||||||||||||| |||||| |||| |||||| |||| |||||||||| || ||||||||    
T  40657975 attcatcatttttgtttttaggaaatttgcattatatcgatgtaccctatcaatttgaatgaatgaat 40658042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 43806898 - 43806831
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| || ||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  43806898 attcatcattcttgtttttagcgaatttgcattatatcgatgtactctatcaatttaaatgaatgaat 43806831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 5024804 - 5024758
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactc 179  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  5024804 attcatcatttttgtttttagcaaattttcattgtatcgatgtactc 5024758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 16273752 - 16273814
Alignment:
Q  138 tcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||| |||||||| ||||| ||||||||||| |||||||| |||||| || ||||||||    
T  16273752 tcctttttatttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaat 16273814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 23732286 - 23732176
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||||||||||||| |||||  || | | |  ||||||| | | ||| ||||| ||||||||||| | ||||||| ||    
T  23732286 cagatccaatcaatgactttggcgtcgtccacgttgcagatctggagaaacgactatttcagatacttgaatataatcatatgtgtatgcttttgtactt 23732187  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  23732186 tgtcgttttat 23732176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 40775488 - 40775598
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| ||||| ||| | |||| |||| |  ||| ||  ||||||||||||||||||    ||||| ||    
T  40775488 cagatccaatcaatgactttggcgtcatccacgttgcagatccagagacatggttattccggagatttaaatatagtcatatgtgtagacaattgtactt 40775587  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  40775588 tgccgttttat 40775598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 47156748 - 47156818
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||| ||||||||||||||| ||||| |||| |||||| ||||||| | ||||| || ||||||||    
T  47156748 caaattcattctttttgtttttagcgaatttgcattatatcgatgtactcttttaatttgaatgaatgaat 47156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 25854959 - 25854893
Alignment:
Q  133 attcatccttttt-gtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| ||||||||| ||||||||||  ||||| ||||||||||||||| || ||||||||    
T  25854959 attcatccttttttgtttttagcgaatttacatt--atcgatgtactctatcaatttgaatgaatgaat 25854893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 32083598 - 32083655
Alignment:
Q  131 aaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||| | ||| |||||| |||||||  ||||||||||||||||||||||||||    
T  32083598 aaattcatcatgtttatttttaacaaatttgtattgtatcgacgtactctatcaattt 32083655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 135038 - 134950
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtagg 104  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  || | |||| |||||| || | ||  |||||||||||||||||||    
T  135038 cagatccaatcaatgactttggcgtcatccacgttgcagatctggagacatggttatttcgaatatttaaatatagtcatatgtgtagg 134950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 29352455 - 29352535
Alignment:
Q  24 atcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtagg 104  Q
    ||||||||||||| ||||||| |||||| |||||  || | ||| ||||| |||||| ||| |||||||||||| ||||||    
T  29352455 atcaatgacttttgcgtcgtcaacgttgcagatccggagagatgagtattccaaagacttgaatatagtcatatttgtagg 29352535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 8611371 - 8611304
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||| |||||  |||| |||| |||||| ||||||| ||||||| || ||||||||    
T  8611371 attcatcctttttgttcttagcgtatttgcattatatcgatgtactctttcaatttgaatgaatgaat 8611304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 11002209 - 11002276
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| |||||||| ||||| |||| |||||| ||||||| | ||||| || ||||||||    
T  11002209 attcatcctttttatttttagcgaatttgcattatatcgatgtactcttttaatttgaatgaatgaat 11002276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 33530365 - 33530258
Alignment:
Q  19 atccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgc 118  Q
    ||||||||||||| |||  |||| || |||||| |||||  || | ||| |||||||  ||| ||| ||||||||||| ||||||| ||||||| |||||    
T  33530365 atccaatcaatgaatttggcgtcatcaacgttgcagatcctgagacatgagtatttcggagacttgaatatagtcataagtgtaggtttttgtattttgc 33530266  T
Q  119 cgttttat 126  Q
    ||| ||||    
T  33530265 cgtgttat 33530258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 34893473 - 34893540
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||  | |||||||| ||||| ||||| ||||| ||||||||||||||| || ||||||||    
T  34893473 attcatccttaatatttttagcgaattttcattgcatcgatgtactctatcaatttgaatgaatgaat 34893540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 41748271 - 41748220
Alignment:
Q  137 atcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||| ||||||||| ||||| ||||||||||| ||||| |||||||||    
T  41748271 atccttttcgtttttagcgaattttcattgtatcgatgtactatatcaattt 41748220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 46918765 - 46918832
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||| | ||||| |||||||||||  |||||| | ||||| || ||||||||    
T  46918765 attcatcctttttgtttttatcgaatttgcattgtatcgatatactctgttaatttgaatgaatgaat 46918832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 49167291 - 49167358
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| ||| ||  |||||| ||||||| || ||||||||    
T  49167291 attcatcctttttgtttttagcgaatttgcattatattgatatactctttcaatttgaatgaatgaat 49167358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 2532308 - 2532362
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||| |||||  |||  ||||| |||||||||||||||    
T  2532308 ttcatcctttttgtttttagcgaatttgtattacatcgatgtactctatcaattt 2532362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 22379602 - 22379492
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||| ||||||||||| || || || |||||| |||||   | | ||| ||||| || ||| ||| ||||||||||||||| ||| |||| || ||    
T  22379602 cagatccagtcaatgactttgacatcttcaacgttgcagatccgaagacatgagtattccagagacttgaatatagtcatatgtgcaggtttttttactt 22379503  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  22379502 tgccgttttat 22379492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 28314368 - 28314298
Alignment:
Q  126 tttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaat 196  Q
    |||||| ||||||||||||| | ||||| |||| |  |||||| ||| ||||||||||||||| |||||||    
T  28314368 tttgcatattcatcctttttatatttagtaaatatgtattgtaacgatgtactctatcaatttgaacgaat 28314298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 42491077 - 42491135
Alignment:
Q  142 ttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| ||||| |||| | |||| ||||||||||||||| || ||||||||    
T  42491077 ttttgtttttagcgaatttgcattatgtcgatgtactctatcaatttgaatgaatgaat 42491135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 7986113 - 7986154
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatc 57  Q
    |||||||||||||||||||| ||||| ||||||||| |||||    
T  7986113 cagatccaatcaatgactttgacgtcatccacgttgcagatc 7986154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 14707873 - 14707913
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||||||| |||||| ||||||    
T  14707873 atatagtcatatgtgtaggcttttgtactttgccattttat 14707913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 22751693 - 22751733
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||||||| ||| |||||||||    
T  22751693 atatagtcatatgtgtaggcttttgtactttaccgttttat 22751733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 46918690 - 46918730
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    |||||||||||||| |||| ||||||| |||||||||||||    
T  46918690 atatagtcatatgtataggcttttgtactttgccgttttat 46918730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 47300536 - 47300568
Alignment:
Q  25 tcaatgacttttacgtcgtccacgttgtagatc 57  Q
    |||||||||||||||||||| ||||||||||||    
T  47300536 tcaatgacttttacgtcgtcaacgttgtagatc 47300568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 47750025 - 47750065
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  47750025 atatagtcatatgtgtaggcatttgtactttgccgttttat 47750065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 5e-21; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 25622792 - 25622725
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||||||    
T  25622792 attcatcctttttgtttttagcgaatttacattgtatcgatgtactctatcaatttaaatgaatgaat 25622725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 44167604 - 44167494
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| ||||||||| |||||  |||| |||| |||| || ||| ||  |||||||||||||||||||  |||||| ||    
T  44167604 cagatccaatcaatgactttgacgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtaggcatttgtactt 44167505  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  44167504 tgccgttttat 44167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 12366234 - 12366301
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| || ||||||||    
T  12366234 attcatcctttttgtttttagcgaattttcattgtatcgatgtactctatcaatttgaatgaatgaat 12366301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 26491664 - 26491734
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||| || ||||||||    
T  26491664 caaattcatcctttttgtttttagcgaattttcattgtatcgatgtattctatcaatttgaatgaatgaat 26491734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 36508150 - 36508260
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  |||| |||| |||| || ||| ||  |||||||||||||||||||  |||||| ||    
T  36508150 cagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtaggcatttgtactt 36508249  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  36508250 tgccgttttat 36508260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 3390789 - 3390856
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||| || ||||||||    
T  3390789 attcatcatttttgtttttagcaaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 3390856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 9207104 - 9207037
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||  || ||||||||    
T  9207104 attcatcctttttgtttttagcaaatttgcattatatcgatgtactctatcaattcaaatgaatgaat 9207037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 15673717 - 15673662
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  15673717 attcatcctttttgtttttagcgaattttcattgtatcgatgtactctatcaattt 15673662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 25771811 - 25771878
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  25771811 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 25771878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 15920095 - 15920205
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||| ||||||||||||  ||||||| |||||| |||||  |||| ||| ||||||| |||| ||| |||||||||||| ||||||  | |||| ||    
T  15920095 cagatccgatcaatgactttggcgtcgtcaacgttgcagatccggaaacatgagtatttcgaagacttgaatatagtcatatttgtaggcatatgtactt 15920194  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  15920195 tgccgttttat 15920205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 25516713 - 25516823
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  25516713 cagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcatatgtgtaggcatttgtactt 25516812  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  25516813 tgccgttttat 25516823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 11550412 - 11550347
Alignment:
Q  135 tcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||| ||||| |||||||| || ||||||||||||||| || ||||||||    
T  11550412 tcatcctttttgtttttagcgaatttgcattgtattgatgtactctatcaatttgaatgaatgaat 11550347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 5930788 - 5930844
Alignment:
Q  132 aattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||||| |||||||||| |||| | |||||||||||||||    
T  5930788 aattcatcctttttgtttttagcgaatttacattatatcaatgtactctatcaattt 5930844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 9715292 - 9715237
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||    
T  9715292 attcatcctttttgtttttagcgaatttgcattgtatcggtgtactctatcaattt 9715237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 13268938 - 13269005
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| ||||| ||||||||| | ||||||||||||||| || ||||||||    
T  13268938 attcatcatttttgtttttagcgaatttgcattgtatcaatgtactctatcaatttgaatgaatgaat 13269005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 27191081 - 27191014
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||| ||||||| || ||||||||    
T  27191081 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaat 27191014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 27840895 - 27840828
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||| ||||||| || ||||||||    
T  27840895 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaat 27840828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 34480331 - 34480398
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||| ||||  ||||||||||||| ||  ||||||||||||||| |||||||||||    
T  34480331 attcatcctttttgttcttagtgaatttacattgtaccggtgtactctatcaatttgaacgaatgaat 34480398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 38822293 - 38822400
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| |||| |||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  38822293 cagatccaatcaatgactttgacgtcatccatgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactt 38822392  T
Q  116 tgccgttt 123  Q
    ||||||||    
T  38822393 tgccgttt 38822400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 3465150 - 3465260
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||| |||  |||| ||||||||| ||||| ||||| |||| ||||||  ||| ||  ||||||||||||||||||   |||||| ||    
T  3465150 cagatccaatcaatgattttggcgtcatccacgttgcagatccagaaacatggttatttcggagatttaaatatagtcatatgtgtagacatttgtactt 3465249  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  3465250 tgtcgttttat 3465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 4878484 - 4878415
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattg--tatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||||  |||||| ||||||||||||||| || ||||||||    
T  4878484 attcatcctttttgtttttagcgaattttcattgtatatcgatgtactctatcaatttgaatgaatgaat 4878415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 28228443 - 28228553
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  ||||| ||||||||||||||   | | ||| |||||||| ||  ||| ||||||||||||||||||| |||| || ||    
T  28228443 cagatccaatcaatgactttggcgtcgcccacgttgtagatccgaagacatgagtatttcagaggcttgaatatagtcatatgtgtaggcttttttactt 28228542  T
Q  116 tgccgttttat 126  Q
    || ||| ||||    
T  28228543 tgtcgtattat 28228553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 43567094 - 43567204
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||   ||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  43567094 cagatccaatcaatgactttggtgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactt 43567193  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  43567194 tgccgttttat 43567204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 43929051 - 43928993
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||  ||||||||    
T  43929051 caaattcatcctttttgtttttagcgaatttacattatatcgatgtacttgatcaattt 43928993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 2251097 - 2251041
Alignment:
Q  132 aattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||||| |||||| ||||  |||| |||||||||||||||    
T  2251097 aattcatcctttttgtttttagcgaatttatattgcttcgatgtactctatcaattt 2251041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 19580743 - 19580695
Alignment:
Q  140 ctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  19580743 ctttttgtttttagcaaattttcattgtatcgatgcactctatcaattt 19580695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 35354007 - 35354071
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatga 198  Q
    ||||||||||||||||||||| |||||  |||| ||||| ||||||||||||||| || ||||||    
T  35354007 ttcatcctttttgtttttagcgaatttgtattgcatcgatgtactctatcaatttgaatgaatga 35354071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 3603351 - 3603418
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||| ||| ||||| || ||||||||    
T  3603351 attcatcctttttgtttttagcgaatttgcattatatcgaagtactatataaatttgaatgaatgaat 3603418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 5071118 - 5071051
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||| ||||| |||||  |||| ||||| ||||||||||||||| || ||||||||    
T  5071118 attcatcctttttgttattagcgaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 5071051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 15920240 - 15920307
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||  |||||  |||||||||| ||||||||||||||| || ||||||||    
T  15920240 attcatcttttttgtttttagtgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaat 15920307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 18141221 - 18141162
Alignment:
Q  141 tttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||| ||||  ||||| ||||||||||||||| || ||||||||    
T  18141221 tttttgtttttagcaaatttgcattacatcgatgtactctatcaatttgaatgaatgaat 18141162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 19953904 - 19953971
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| ||||| |||||||| ||  |||||||||||||| || ||||||||    
T  19953904 attcatcatttttgtttttagcgaatttgcattgtatagatatactctatcaatttgaaagaatgaat 19953971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 37884019 - 37884086
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| ||||| |||||||| || ||||| ||||||||| || ||||||||    
T  37884019 attcatcatttttgtttttagcgaattttcattgtattgatgtactatatcaatttgaatgaatgaat 37884086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 3603206 - 3603316
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| |||| |||| |||||   | | |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  3603206 cagatccaatcaatgactttgacgtcatccatgttgcagatccgaagacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactt 3603305  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  3603306 tgccgttttat 3603316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 3397730 - 3397657
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaattga 203  Q
    |||||||||||||||||||||||   |||||  |||| ||| | ||||||||||||||| || |||||||||||    
T  3397730 caaattcatcctttttgtttttaaagaatttgtattgcatcaatgtactctatcaatttgaatgaatgaattga 3397657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 14825923 - 14825964
Alignment:
Q  129 gcaaattcatcctttttgtttttagcaaatttacattgtatc 170  Q
    ||||||||||||||||| ||||||||||||||| ||||||||    
T  14825923 gcaaattcatcctttttatttttagcaaatttatattgtatc 14825964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 3465299 - 3465359
Alignment:
Q  137 atcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatg 197  Q
    ||||||||| |||||||||||||| |||| |||||| ||||||| ||||||| || |||||    
T  3465299 atcctttttatttttagcaaatttgcattatatcgatgtactctttcaatttgaatgaatg 3465359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 6090252 - 6090320
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatga 198  Q
    ||||||||||||||||||||| ||| ||||| |||| ||| || ||||||| ||||||| || ||||||    
T  6090252 caaattcatcctttttgttttgagcgaatttgcattatattgatgtactctttcaatttgaatgaatga 6090320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 11931163 - 11931203
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  11931163 atatagtcatatgtgtaggcttttgtactttgccgttttat 11931203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 13547173 - 13547228
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||  |||||||||||||||||| | |||||||||  |||||||||||||||    
T  13547173 attcatcaattttgtttttagcaaattcatattgtatcggtgtactctatcaattt 13547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 18141367 - 18141264
Alignment:
Q  23 aatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgccgtt 122  Q
    |||||||||||||  |||| ||||||||| |||||  || | |||| |||| |  ||| ||  |||||||||||||||||||  |||||| |||||||||    
T  18141367 aatcaatgactttggcgtcctccacgttgcagatccggagacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgtt 18141268  T
Q  123 ttat 126  Q
    ||||    
T  18141267 ttat 18141264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 27023887 - 27023832
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| |||||  ||| |||||| |||||||||| ||||    
T  27023887 attcatcctttttgtttttagcgaatttgtattatatcgatgtactctatcgattt 27023832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 28228584 - 28228655
Alignment:
Q  129 gcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| ||| |||||||||||||  ||||| |||| |||||| || |||||||||||| || ||||||||    
T  28228584 gcaaattaatcttttttgtttttagtgaatttgcattatatcgatgttctctatcaatttgaatgaatgaat 28228655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 40125751 - 40125818
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| ||||||||||||| |  |||| ||||||||| | ||||||||||||||| || ||||||||    
T  40125751 attcattctttttgtttttaacggattttcattgtatctatgtactctatcaatttgaatgaatgaat 40125818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 41177224 - 41177291
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||| | ||||| |||| ||||||  |||||| ||||||| || ||||||||    
T  41177224 attcatcctttttgtttttaacgaatttgcattatatcgatttactctttcaatttgaatgaatgaat 41177291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 16720599 - 16720541
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||| |||||||||||||| |||| |||||  ||| | |||||||||    
T  16720599 caaattcatcctttttatttttagcaaatttgcattatatcgttgtattatatcaattt 16720541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 17056362 - 17056252
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||| || |||||| ||| |||||||| |||||| | |||   | | |||||||||||| |   ||| ||||||||||||||||||  ||||||| ||    
T  17056362 cagatcaaaacaatgattttgacgtcgtcgacgttgcatatccgtagacatgggtatttcagaagcttgaatatagtcatatgtgtagacttttgtactt 17056263  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  17056262 tgccgttttat 17056252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 17068809 - 17068699
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||| || |||||| ||| |||||||| |||||| | |||   | | |||||||||||| |   ||| ||||||||||||||||||  ||||||| ||    
T  17068809 cagatcaaaacaatgattttgacgtcgtcgacgttgcatatccgtagacatgggtatttcagaagcttgaatatagtcatatgtgtagacttttgtactt 17068710  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  17068709 tgccgttttat 17068699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 44167455 - 44167405
Alignment:
Q  137 atcctttttgtttttagcaaatttacattgtatcgacgtactctatcaatt 187  Q
    |||||||||||||||||| ||||| |||| |||||| ||||||| ||||||    
T  44167455 atcctttttgtttttagcgaatttgcattatatcgatgtactctttcaatt 44167405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 17095330 - 17095269
Alignment:
Q  65 atgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    |||||||||||| |   ||| ||||||||||||||||||  ||||||| |||||||||||||    
T  17095330 atgggtatttcagaagcttgaatatagtcatatgtgtagacttttgtactttgccgttttat 17095269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 34480256 - 34480297
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttatt 127  Q
    ||||||||||||||||||| ||||||| |||| |||||||||    
T  34480256 atatagtcatatgtgtaggtttttgtactttgtcgttttatt 34480297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 8064682 - 8064570
Alignment:
Q  14 cacagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaa 113  Q
    |||||||||||||||| || || ||||| || |||||| |||||  || |||||  |||||| |||| ||| |||||||||||| || | | || ||||     
T  8064682 cacagatccaatcaataacgttgacgtcttcaacgttgcagatccggagatatgattatttcgaagacttgaatatagtcatatttgcaagtttatgtac 8064583  T
Q  114 tttgccgttttat 126  Q
    |||| ||||||||    
T  8064582 tttgtcgttttat 8064570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 9207179 - 9207139
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  9207179 atatagtcatatgtgtaggaatttgtgttttgccgttttat 9207139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 15673791 - 15673751
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||| ||| |||||||||||||    
T  15673791 atatagtcatatgtgtaggctttagtattttgccgttttat 15673751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 25622867 - 25622827
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||||||| |||| ||||||||    
T  25622867 atatagtcatatgtgtaggcttttgtactttgacgttttat 25622827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 37883944 - 37883984
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||| ||| |||||||||||||    
T  37883944 atatagtcatatgtgtaggctttagtactttgccgttttat 37883984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 161
Target Start/End: Original strand, 41797976 - 41798004
Alignment:
Q  133 attcatcctttttgtttttagcaaattta 161  Q
    |||||||||||||||||||||||||||||    
T  41797976 attcatcctttttgtttttagcaaattta 41798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 5e-21; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 34659393 - 34659322
Alignment:
Q  129 gcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||    
T  34659393 gcaaattcatcctttatgtttttagcaaatttgcattgtatcgatgtactctatcaatttgaatgaatgaat 34659322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 8893658 - 8893725
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| || ||||||||    
T  8893658 attcatcctttttgtttttagcgaatttgcattgtatcgatgtactctatcaatttgaatgaatgaat 8893725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 33177346 - 33177279
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| || ||||||||    
T  33177346 attcatcctttttgtttttagcaaatttgcattgtatcgatgtactctattaatttgaatgaatgaat 33177279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 900411 - 900484
Alignment:
Q  126 tttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| || ||||||||    
T  900411 tttgcagattcatcctttt-gtttttagcgaatttacattgtatcgatgtactctatcaatttgaatgaatgaat 900484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 34659534 - 34659424
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  ||||||| || ||| |||||  || ||||||||||| |||||| ||| ||||||||||| ||||||| |||| || ||    
T  34659534 cagatccaatcaatgactttggcgtcgtcaacattgcagatccggagatatgggtattccaaagacttgaatatagtcataagtgtaggcttttttactt 34659435  T
Q  116 tgccgttttat 126  Q
    |||| ||||||    
T  34659434 tgccattttat 34659424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 49652204 - 49652268
Alignment:
Q  136 catcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||||| |||| |||||| ||||||||||||||| || ||||||||    
T  49652204 catcctttttgtttttagcaaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 49652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 15276194 - 15276127
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  15276194 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 15276127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 33703258 - 33703191
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||| |||||||||||    
T  33703258 attcatcctttttgtttttagaaattttttattgtatcgatgtactctatcaatttaaacgaatgaat 33703191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 44513750 - 44513683
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||| || ||||||||    
T  44513750 attcatcctttttgtttttagcgaattttcattgtatcgatgtactctaccaatttaaatgaatgaat 44513683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 46589514 - 46589581
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||||| || ||||||||    
T  46589514 attcatcccttttgtttttagcgaattttcattgtatcgatgtactctatcaatttgaatgaatgaat 46589581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 11121339 - 11121409
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||||| || || ||||||||||| ||| ||||||||||| || ||||||||    
T  11121339 caaattcatcctttttgtttttagcgaactttcattgtatcgatgtattctatcaatttgaatgaatgaat 11121409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 630532 - 630465
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  630532 attcatcatttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 630465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 5844497 - 5844552
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||||||||||||||    
T  5844497 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaattt 5844552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 13691511 - 13691456
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||||||||||  |||| ||||| |||||||||||||||    
T  13691511 attcatcctttttgtttttagcaaatttgtattgcatcgatgtactctatcaattt 13691456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 13969388 - 13969321
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||||| || ||||||||    
T  13969388 attcatcctttttgttttttgcgaatttgcattgtatcgatgtattctatcaatttgaatgaatgaat 13969321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 18343984 - 18344039
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  18343984 attcatcctttttgtttttagcaaatttgtattgtatcgatatactctatcaattt 18344039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 23257454 - 23257509
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||||||||||||||    
T  23257454 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaattt 23257509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 38644545 - 38644478
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||| ||||||||||||||| |||| ||| || ||||||||||||||| || ||||||||    
T  38644545 attcatccttttagtttttagcaaatttgcattatattgatgtactctatcaatttaaatgaatgaat 38644478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 40992664 - 40992719
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| |||||||||| |||| | |||||||||||||||    
T  40992664 attcatcctttttgtttttagcgaatttacattatatcaatgtactctatcaattt 40992719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 45659380 - 45659447
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||| ||||||||||||||||||| |||| |||||| |||||||||| |||| || ||||||||    
T  45659380 attcatcccttttgtttttagcaaatttgcattatatcgatgtactctatcgatttaaatgaatgaat 45659447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 21326694 - 21326804
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  || | |||| |||| | |||| ||  |||||||||||||||||||  ||||||  |    
T  21326694 cagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccgaagatttaaatatagtcatatgtgtaggcatttgtacct 21326793  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  21326794 tgccgttttat 21326804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 38646951 - 38647017
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||| ||||| |||| ||| || ||||||||||||||| || ||||||||    
T  38646951 ttcatcctttttgtttttagcgaatttgcattatattgatgtactctatcaatttgaatgaatgaat 38647017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 45659235 - 45659345
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| || ||||||||||||   ||| |||| |||| |||||| ||   ||||||||||||||||||  |||||| ||    
T  45659235 cagatccaatcaatgactttgacgtcatctacgttgtagatccgaaaacatggttattccaaagatttaagtatagtcatatgtgtaggcatttgtactt 45659334  T
Q  116 tgccgttttat 126  Q
    ||  |||||||    
T  45659335 tggtgttttat 45659345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 8893517 - 8893609
Alignment:
Q  19 atccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgta 112  Q
    ||||||||||||||||| |||||||| ||||||||||||  || | || |||||| |  ||| ||| ||||||||||||||||||| |||||||    
T  8893517 atccaatcaatgactttgacgtcgtcaacgttgtagatccggagacataggtattccggaga-ttgaatatagtcatatgtgtaggcttttgta 8893609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 900316 - 900372
Alignment:
Q  18 gatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtattt 74  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||    
T  900316 gatccaatcaatgactttgacgtcatccacgttgtagatccagagacatgggtattt 900372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 26771471 - 26771539
Alignment:
Q  132 aattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||| |||||||||||||  |||||  |||||||||| ||||||||||||||| || ||||||||    
T  26771471 aattcatcttttttgtttttagtgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaat 26771539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 32538960 - 32538888
Alignment:
Q  126 tttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatga 198  Q
    |||||| ||||||| | ||||| |||||  ||||||||||||||||| ||||||||||||||| || ||||||    
T  32538960 tttgcagattcatcatctttgtatttagtgaatttacattgtatcgatgtactctatcaatttaaatgaatga 32538888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 47392358 - 47392466
Alignment:
Q  17 agatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaattt 116  Q
    ||||||||| |||||||||  ||||||||||||||||||||   | | || |||  |||| ||| ||| ||||||||||||||||| | ||||||| |||    
T  47392358 agatccaataaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcagagacttgaatatagtcatatgtgtatgcttttgtacttt 47392457  T
Q  117 gccgtttta 125  Q
    | |||||||    
T  47392458 gtcgtttta 47392466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 12147796 - 12147729
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||| |||| |||||||| ||||| |||||||||||  |||||||||||||| || ||||||||    
T  12147796 attcatcccttttatttttagcgaattttcattgtatcgatatactctatcaatttgaatgaatgaat 12147729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 12967473 - 12967414
Alignment:
Q  141 tttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||| || | |||||| ||||||||||||||| || ||||||||    
T  12967473 tttttgtttttagcaaatttgcactatatcgatgtactctatcaatttgaatgaatgaat 12967414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 14717024 - 14716957
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||| | ||||| ||||||||| || ||||||||    
T  14717024 attcatcctttttgtttttagcgaatttgcattatatctatgtactttatcaatttgaatgaatgaat 14716957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 15698564 - 15698631
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||| ||||||||||| ||||| |||| |||||| ||||||| ||||||| || ||||||||    
T  15698564 attcatccttcttgtttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaat 15698631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 22344660 - 22344593
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||| | ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  22344660 attcatcatttttgtttttaacgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 22344593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 34567047 - 34567114
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| |||||||| |||||  |||| ||||| ||||||||||||||| || ||||||||    
T  34567047 attcatcctttttatttttagcgaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 34567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 44562497 - 44562442
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||| | ||||| |||| |||||| |||||||||||||||    
T  44562497 attcatcctttttgtttttatcgaatttgcattatatcgatgtactctatcaattt 44562442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 6212807 - 6212697
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| |||||||||||||||  || | |||| |||| |  ||| ||  ||||||||||||| |||||   ||||| ||    
T  6212807 cagatccaatcaatgactttggcgtcatccacgttgtagatccggagacatggttattccggagatttaaatatagtcatatgggtaggcaattgtactt 6212708  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  6212707 tgccgttttat 6212697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 13969533 - 13969423
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| |||||||| |||||| |||||  || | ||| |||||    | | ||| ||||||| |||||| |||| ||||||| ||    
T  13969533 cagatccaatcaatgactttgacgtcgtcaacgttgcagatccggagacatgagtattctggaaacttgaatatagtaatatgtataggcttttgtactt 13969434  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  13969433 tgccgttttat 13969423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 26771327 - 26771437
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||| ||||| | |||||| |||||| |||||   | | |||  ||||||  ||| ||| ||||||||||||||||||| ||||||| ||    
T  26771327 cagatccaatcaataactttgatgtcgtcaacgttgcagatccgaagacatgaatatttcggagacttgaatatagtcatatgtgtaggcttttgtactt 26771426  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  26771427 tgtcgttttat 26771437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 22344805 - 22344717
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtagg 104  Q
    |||||||||||||||||||| ||||| ||||||||| |||||  || | |||| |||| |  ||| ||  |||||||||||||||||||    
T  22344805 cagatccaatcaatgactttgacgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtagg 22344717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 33177421 - 33177381
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  33177421 atatagtcatatgtgtaggcttttgtactttgccgttttat 33177381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 47551316 - 47551404
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||| |||||  |||| ||| |||||    ||| ||| |||||||||||| ||||||    
T  47551316 cagatccaatcaatgactttgacgtcgtcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtagg 47551404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 6212662 - 6212607
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||| |||||||||||| | |||||||||| ||||||  ||||||||||||||    
T  6212662 attcatcatttttgtttttaacgaatttacattatatcgatatactctatcaattt 6212607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 28213419 - 28213474
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| |||| |||| | ||||| |||||||||    
T  28213419 attcatcctttttgtttttagcgaatttgcattatatcaatgtactttatcaattt 28213474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 52839896 - 52839963
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||  ||||||  ||||| ||||||||||| ||||||||| ||||| || ||||||||    
T  52839896 attcatcctttttacttttagtgaattttcattgtatcgatgtactctattaatttgaatgaatgaat 52839963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 15698419 - 15698529
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||| ||||||||||||||  |||| ||||||||| ||||| | ||| |||| |||| | |||| ||  | |||||||||||||||||   |||||  |    
T  15698419 cagattcaatcaatgactttggcgtcatccacgttgcagatccaaaaacatggttattccgaagatttaaaaatagtcatatgtgtaggcaattgtatgt 15698518  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  15698519 tgccgttttat 15698529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 44513895 - 44513785
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||| |||||||||||||   |||||| |||||| |||||  || | ||||||||| |  ||| ||  ||||||||||||||||||| ||| ||| ||    
T  44513895 cagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactt 44513796  T
Q  116 tgccgttttat 126  Q
    ||| |||||||    
T  44513795 tgctgttttat 44513785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 160
Target Start/End: Original strand, 45750857 - 45750886
Alignment:
Q  131 aaattcatcctttttgtttttagcaaattt 160  Q
    ||||||||||||||||||||||||||||||    
T  45750857 aaattcatcctttttgtttttagcaaattt 45750886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 2350913 - 2350953
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    |||||||||||| |||||| ||||||| |||||||||||||    
T  2350913 atatagtcatatttgtaggcttttgtactttgccgttttat 2350953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 21326871 - 21326927
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaatttt 189  Q
    ||||||||||||||||||||||  |||| |||| |||  | ||||||||||||||||    
T  21326871 attcatcctttttgtttttagcgtatttgcattatatttatgtactctatcaatttt 21326927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 33703333 - 33703293
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||| ||| |||||||||||||    
T  33703333 atatagtcatatgtgtaggctttagtactttgccgttttat 33703293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 42491279 - 42491323
Alignment:
Q  156 aatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| |||||||||| ||||||||||||||| || ||||||||    
T  42491279 aatttatattgtatcgatgtactctatcaatttgaatgaatgaat 42491323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 5417117 - 5417007
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||| ||||||   ||||||||||||| ||||| ||| | |||||||||||  ||| ||| ||||||||||||||||| | ||||||| ||    
T  5417117 cagatccaatcaaagactttggtgtcgtccacgttgcagatccagatacatgggtatttcggagacttgaatatagtcatatgtgtatgcttttgtactt 5417018  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  5417017 tgccgttttat 5417007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 4663568 - 4663501
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| |||||||| ||||| ||||||||||| |||||||| |||||| || ||||||||    
T  4663568 attcatcctttttatttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaat 4663501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 11426311 - 11426378
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||| ||||||| || ||||||||    
T  11426311 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctttcaatttaaatgaatgaat 11426378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 20496417 - 20496524
Alignment:
Q  19 atccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgc 118  Q
    |||||||||||||||||   |||||| |||||| | |||  || | ||||||||| |  ||| ||| ||||||||||||||||||| ||||||| |||||    
T  20496417 atccaatcaatgactttggtgtcgtcaacgttgcatatcttgagagatgggtattccggagacttgaatatagtcatatgtgtaggcttttgtactttgc 20496516  T
Q  119 cgttttat 126  Q
    ||||||||    
T  20496517 cgttttat 20496524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 20496559 - 20496626
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| ||||||||| | |||| |||||||||| || ||||||||    
T  20496559 attcatcctttttgtttttagcgaatttgcattgtatcaatgtacgctatcaatttgaatgaatgaat 20496626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 31748323 - 31748378
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||||||||||||||    
T  31748323 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaattt 31748378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 10744945 - 10745015
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||| | |||||  |||||||||| |||||||| |||||| || ||||||||    
T  10744945 caaattcatcctttttgtttttaacgaatttcaattgtatcgatgtactctaccaatttgaatgaatgaat 10745015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 12576232 - 12576162
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||||| ||||| |||| |||| | ||||||| ||||||| || ||||||||    
T  12576232 caaattcatcctttttgtttttagcgaatttgcattatatctatgtactctttcaatttgaatgaatgaat 12576162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 23843172 - 23843105
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| ||||| |||| ||| || ||||||||||||||| || ||||||||    
T  23843172 attcatcatttttgtttttagcgaatttgcattatatggatgtactctatcaatttgaatgaatgaat 23843105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 34020969 - 34021036
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| |||||  |||| ||||| ||||||||||||| | || ||||||||    
T  34020969 attcatcctttttgtttttagcgaatttgtattgcatcgatgtactctatcaatatgaatgaatgaat 34021036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 7049466 - 7049576
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||| |||||||||||||| || || ||||||||| |||||  || |||||  |||| | |||| ||  |||||||||||||||||||  |||||| ||    
T  7049466 cagatgcaatcaatgactttgacatcatccacgttgcagatccggagatatgattattccgaagatttaaatatagtcatatgtgtaggcatttgtactt 7049565  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  7049566 tgtcgttttat 7049576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 12576374 - 12576264
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  ||||||  |    
T  12576374 cagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtacct 12576275  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  12576274 tgtcgttttat 12576264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 16913694 - 16913762
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaatt 201  Q
    |||||| ||||||||||||||| ||||| |||| |||||| ||||| | ||||||| || |||||||||    
T  16913694 attcattctttttgtttttagcgaatttgcattatatcgatgtactatttcaatttgaatgaatgaatt 16913762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 5545062 - 5545113
Alignment:
Q  149 tttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| ||||||||||||||| | ||||||||||||||| || ||||||||    
T  5545062 tttagcgaatttacattgtatcaatgtactctatcaatttgaatgaatgaat 5545113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 8632944 - 8632877
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| ||||| |||| |||||| ||||| | ||||||| || ||||||||    
T  8632944 attcatcttttttgtttttagcgaatttgcattatatcgatgtactatttcaatttgaatgaatgaat 8632877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 8644594 - 8644649
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||| || ||||||||||  ||||| ||||||||||| |||||||||||||||    
T  8644594 attcatctttcttgtttttagtgaatttgcattgtatcgatgtactctatcaattt 8644649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 19760158 - 19760209
Alignment:
Q  137 atcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||| | ||||| |||| |||||| |||||||||||||||    
T  19760158 atcctttttgtttttatcgaatttgcattatatcgatgtactctatcaattt 19760209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 20845379 - 20845446
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| ||||||||||||||| |||||  ||| |||||| ||||| ||||||||| || ||||||||    
T  20845379 attcattctttttgtttttagcgaatttgtattatatcgatgtactatatcaatttgaatgaatgaat 20845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 32804516 - 32804626
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||   |||||||| |||||||||   || | |||  |||| || ||| ||| ||||||| ||||||||||| ||||||| ||    
T  32804516 cagatccaatcaatgactttggtgtcgtccatgttgtagattcggagacatgaatattccagagacttgaatatagttatatgtgtaggcttttgtactt 32804615  T
Q  116 tgccgttttat 126  Q
    ||  |||||||    
T  32804616 tgttgttttat 32804626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 8644519 - 8644559
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||||||| |||| ||||||||    
T  8644519 atatagtcatatgtgtaggcttttgtactttgtcgttttat 8644559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 10744873 - 10744913
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||| ||| |||||||||||||    
T  10744873 atatagtcatatgtgtaggctttagtactttgccgttttat 10744913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 12652024 - 12651984
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| |||||||||||| | ||||||    
T  12652024 atatagtcatatgtgtaggtttttgtaatttgtcattttat 12651984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 16913616 - 16913656
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  16913616 atatagtcatatgtgtaggcatttgtactttgccgttttat 16913656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 31748248 - 31748288
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  31748248 atatagtcatatgtgtaggcatttgtactttgccgttttat 31748288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 22286644 - 22286534
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| ||||||||| |||||  |||| |||| |||| || ||| ||  |||||||||||||||||||  |||||| ||    
T  22286644 cagatccaatcaatgactttgacgtcatccacgttgcagatctggaaacatggttattccagagatttaaatatagtcatatgtgtaggcatttgtactt 22286545  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  22286544 tgccgttttat 22286534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 1165144 - 1165077
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  1165144 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 1165077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 21586123 - 21586230
Alignment:
Q  19 atccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgc 118  Q
    ||||||||||||||||| ||||||||||||||| |||||  || | ||| ||||| |  ||||||| ||||||| ||||||||||  ||||||| |||||    
T  21586123 atccaatcaatgactttgacgtcgtccacgttggagatccggagacatgtgtattccggagagttgaatatagtgatatgtgtagccttttgtactttgc 21586222  T
Q  119 cgttttat 126  Q
     |||||||    
T  21586223 tgttttat 21586230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 34767345 - 34767400
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaatttt 189  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  34767345 ttcatcctttttgtttttagcaaatttacgttgtattgatgtactctatcaatttt 34767400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 43030049 - 43030116
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  43030049 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 43030116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 43839265 - 43839198
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| |||||| ||||||||||||||||||| |||||| ||||||||||||||| || ||||||||    
T  43839265 attcattctttttatttttagcaaatttacattatatcgatgtactctatcaatttgaatgaatgaat 43839198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 45664587 - 45664654
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| |||||||| |||||||||| |||||| ||||||||||||||| || ||||||||    
T  45664587 attcatcctttttatttttagcgaatttacattatatcgatgtactctatcaatttaaatgaatgaat 45664654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 21803894 - 21803952
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||||||| ||||| |||| |||||| |||||||||||||||    
T  21803894 caaattcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaattt 21803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 28995202 - 28995092
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  28995202 cagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactt 28995103  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  28995102 tgccgttttat 28995092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 46926767 - 46926825
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||||||| ||||| |||| |||||| |||||||||||||||    
T  46926767 caaattcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaattt 46926825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 31628843 - 31628755
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtagg 104  Q
    |||||||||||||||  ||||  |||||| |||||||||||| ||||| ||| |||||||||| | ||| |||||||||||| ||||||    
T  31628843 cagatccaatcaatggtttttgtgtcgtcaacgttgtagatccagaaacatgagtatttcaaatacttgaatatagtcatatttgtagg 31628755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 39340557 - 39340628
Alignment:
Q  129 gcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||||||  ||||| |||||||||||  ||| |||||||||| || ||||||||    
T  39340557 gcaaattcatcctttttgtttttagggaatttgcattgtatcgatataccctatcaatttgaaagaatgaat 39340628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 40797399 - 40797454
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||||    
T  40797399 attcatccttttcgtttttagcgaattttcattgtatcgatgtactctatcaattt 40797454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 4019957 - 4020031
Alignment:
Q  126 tttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| ||||||| ||||||||||| || ||||| ||||||||||| | ||||||||||||| || ||||||||    
T  4019957 tttgcagattcatcatttttgttttttgcgaatttgcattgtatcgatgcactctatcaatttgaatgaatgaat 4020031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 33076506 - 33076616
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| ||||||||| |||||  ||   |||| |||| |  ||| ||| |||||||||||||||| ||  |||||| ||    
T  33076506 cagatccaatcaatgactttgacgtcatccacgttgcagatccggaggcatggttattccggagatttgaatatagtcatatgtgttggcatttgtactt 33076605  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  33076606 tgccgttttat 33076616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 10977609 - 10977676
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||  |||||| ||||| ||||||||| || ||||||||    
T  10977609 attcatcctttttgtttttagcgaatttgcatgatatcgatgtactatatcaatttgaatgaatgaat 10977676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 22844418 - 22844485
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||| ||||||||||||| ||| ||||| ||||||||||| ||||||||||||||  || ||||||||    
T  22844418 attcgtcctttttgttttaagcgaattttcattgtatcgatgtactctatcaattcgaatgaatgaat 22844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 29182358 - 29182303
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||| ||||| |||||||||||||| |||| |||||| |||||||||||||||    
T  29182358 attcatcatttttatttttagcaaatttgcattatatcgatgtactctatcaattt 29182303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 29776438 - 29776383
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||| | ||||| ||||||||| | |||||||||||||||    
T  29776438 attcatcctttttgtttttatcgaatttgcattgtatcaatgtactctatcaattt 29776383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 32237744 - 32237677
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||| |||||| ||||| ||||| ||||||||||| ||||||||| ||||| || ||||||||    
T  32237744 attcatcctctttgttgttagcgaatttgcattgtatcgatgtactctattaatttgaatgaatgaat 32237677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 42106504 - 42106559
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||| ||||||| | ||||| ||||||||||| |||||||||||||||    
T  42106504 attcatccttttcgtttttaacgaattttcattgtatcgatgtactctatcaattt 42106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 3088557 - 3088447
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  3088557 cagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactt 3088458  T
Q  116 tgccgttttat 126  Q
    ||  |||||||    
T  3088457 tgttgttttat 3088447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 37051961 - 37052031
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||||  |||||  |||| ||||| ||||||| ||||||| || ||||||||    
T  37051961 caaattcatcctttttgtttttagtgaatttgtattgcatcgatgtactctgtcaatttgaatgaatgaat 37052031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 39340426 - 39340530
Alignment:
Q  22 caatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgccgt 121  Q
    ||||||||||||||  ||||||| |||||| |||||  || | ||| ||||| |  ||| ||| ||||||||||||||||||| |||| || ||| ||||    
T  39340426 caatcaatgactttgtcgtcgtcaacgttgcagatccggagacatgtgtattccggagacttgaatatagtcatatgtgtaggcttttatacttttccgt 39340525  T
Q  122 tttat 126  Q
    |||||    
T  39340526 tttat 39340530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 43243174 - 43243226
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaa 185  Q
    ||||||| |||||||||||||||||||| |||||||| || ||||| ||||||    
T  43243174 attcatcatttttgtttttagcaaatttgcattgtattgatgtactttatcaa 43243226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 3088412 - 3088357
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||| |||||||||||||| ||||| |||| |||||| ||||||| |||||||    
T  3088412 attcatcatttttgtttttagcgaatttgcattatatcgatgtactctttcaattt 3088357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 25939244 - 25939177
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| ||||||   ||||| ||||||||||| ||||| ||||||||| || ||||||||    
T  25939244 attcatcctttttatttttaatgaatttgcattgtatcgatgtactttatcaatttgaatgaatgaat 25939177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 27831465 - 27831519
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||| ||||||||||||||| |||| | |||||||||| |||||||||||||||    
T  27831465 attcattctttttgtttttagcgaattaa-attgtatcgatgtactctatcaattt 27831519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 28995057 - 28995010
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactct 180  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||||||    
T  28995057 attcatcctttttgtttttagcgaatttgcattatatcgatgtactct 28995010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 33076651 - 33076718
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||| | ||||| ||   |||||| ||||||||||||||| || ||||||||    
T  33076651 attcatcctttttgtttttaacgaatttgcaccatatcgatgtactctatcaatttgaatgaatgaat 33076718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 50460414 - 50460521
Alignment:
Q  19 atccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgc 118  Q
    ||||||||||| ||||| |||| ||| |||||| | |||   | | ||| ||||| |||||| ||| ||||||||||||||||||| ||||||| ||||     
T  50460414 atccaatcaataactttgacgttgtcaacgttgcaaatccgaagacatgagtattccaaagacttgaatatagtcatatgtgtaggcttttgtactttgt 50460513  T
Q  119 cgttttat 126  Q
     |||||||    
T  50460514 tgttttat 50460521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 2598437 - 2598498
Alignment:
Q  126 tttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||||||||||   ||||  |||||||||| ||||| |||||||||    
T  2598437 tttgcaaattcatcctttttgtttttag-ggatttgtattgtatcgatgtactatatcaattt 2598498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 20200951 - 20200841
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||   |||| ||||||||| | |||  || | |||  ||||||  ||| ||  |||||||||||||||||||  |||||| ||    
T  20200951 cagatccaatcaatgacttcggcgtcttccacgttgcaaatccggagacatgattatttcggagatttaaatatagtcatatgtgtaggcatttgtactt 20200852  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  20200851 tgccgttttat 20200841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 22286499 - 22286445
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaatt 187  Q
    ||||||| |||||||||||||| ||||| |||| |||||| ||||||| ||||||    
T  22286499 attcatcatttttgtttttagcgaatttgcattatatcgatgtactctctcaatt 22286445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 29776532 - 29776474
Alignment:
Q  67 gggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgccgtttta 125  Q
    |||||||||| ||| ||| ||||||||||||||| ||| ||||||| |||| |||||||    
T  29776532 gggtatttcagagacttgaatatagtcatatgtgcaggcttttgtactttgtcgtttta 29776474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 30293158 - 30293220
Alignment:
Q  126 tttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||| |||||||||||||| |||||  |||||||| |  || |||||||||||    
T  30293158 tttgcaaattcatcatttttgtttttagcgaatttgtattgtatcaatatattctatcaattt 30293220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 50520004 - 50520114
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||| |||||||||| |||  |||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  50520004 cagattcaatcaatgattttggcgtcatccacgttgcagatctggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactt 50520103  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  50520104 tgtcgttttat 50520114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 913064 - 913019
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtact 178  Q
    |||||||||||| ||||||||| ||||| ||||||||||| |||||    
T  913064 attcatccttttcgtttttagcgaattttcattgtatcgatgtact 913019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 11846916 - 11846981
Alignment:
Q  135 tcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||| |||||||| ||||| |||| ||| || ||||||| ||||||| || ||||||||    
T  11846916 tcatcctttttatttttagcgaatttgcattttattgatgtactctgtcaatttgaatgaatgaat 11846981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 21586265 - 21586302
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatc 170  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  21586265 attcatcctttttgtttttagcgaatttgcattgtatc 21586302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 26412508 - 26412605
Alignment:
Q  13 gcacagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttg 110  Q
    ||||| ||||||||||||| |||  ||||||| |||||| | |||  || | |||  ||||||||||| ||  ||||||||||||||||||| |||||    
T  26412508 gcacatatccaatcaatgagtttggcgtcgtcaacgttgcaaatccggagacatgaatatttcaaagacttaaatatagtcatatgtgtaggtttttg 26412605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 34767256 - 34767317
Alignment:
Q  65 atgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||| |  ||| ||| |||||||| |||||||||| ||||||| |||||||||||||    
T  34767256 atgggtattccggagacttgaatatagtcttatgtgtaggcttttgtactttgccgttttat 34767317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 913139 - 913099
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||| ||| |||||||||||||    
T  913139 atatagtcatatgtgtaggctttagtactttgccgttttat 913099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 20203063 - 20203023
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  20203063 atatagtcatatgtgtaggcatttgtactttgccgttttat 20203023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 32237883 - 32237779
Alignment:
Q  22 caatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgccgt 121  Q
    |||||||||||||| | || |||||||||| |||||   | | |||| ||||||  ||| ||| || |||||||||||||||| ||||||  ||||| ||    
T  32237883 caatcaatgactttgatgttgtccacgttgcagatccgaagacatggatatttcggagatttgaatttagtcatatgtgtaggcttttgtgctttgcagt 32237784  T
Q  122 tttat 126  Q
    |||||    
T  32237783 tttat 32237779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 48401502 - 48401546
Alignment:
Q  156 aatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| |||||||||| ||||||||||||||| || ||||||||    
T  48401502 aatttatattgtatcgatgtactctatcaatttgaatgaatgaat 48401546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 5e-18; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 15729732 - 15729662
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||||| || ||||||||    
T  15729732 caaattcatcctttttgttgttagcaaattttcattgtatcgatgtactctaccaatttgaatgaatgaat 15729662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 4634649 - 4634716
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  4634649 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 4634716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 9662219 - 9662286
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  9662219 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 9662286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 14346797 - 14346864
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||||| || ||||||||    
T  14346797 attcatcctctttgtttttagcgaattttcattgtatcgatgtactctatcaatttgaatgaatgaat 14346864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 14542260 - 14542193
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||| || ||||||||    
T  14542260 attcatcctttttgtttttagcgaatttacattatatcgatgtattctatcaatttgaatgaatgaat 14542193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 43157143 - 43157198
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  43157143 attcatcctttttgtttttagcgaattttcattgtatcgatgtactctatcaattt 43157198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 23067599 - 23067529
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||||| ||||| |||| |||||| ||||||| ||||||| || ||||||||    
T  23067599 caaattcatcctttttgtttttagcgaatttgcattatatcgatgtactctgtcaatttgaatgaatgaat 23067529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 34668549 - 34668607
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||||    
T  34668549 caaattcatcctttttgtttttagcaaatttgcattatatcgatgtactttatcaattt 34668607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 23926407 - 23926471
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatg 197  Q
    |||||||||||||||||||||| |||||  |||||||| | ||||||||||||||| ||||||||    
T  23926407 attcatcctttttgtttttagcgaatttgtattgtatcaatgtactctatcaatttgaacgaatg 23926471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 30416376 - 30416308
Alignment:
Q  133 attcatccttttt-gtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||| || ||||||||    
T  30416376 attcatcctttttcgtttttagcgaattttcattgtatcgatgtactctatcaatttaaatgaatgaat 30416308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 42972259 - 42972367
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| ||||||||| |||||  || | |||  |||| |||||| ||  |||||||||||||||||||  ||||||  |    
T  42972259 cagatccaatcaatgactttgacgtcatccacgttgcagatccggagacatgactattccaaagatttaaatatagtcatatgtgtaggcatttgtacct 42972358  T
Q  116 tgccgtttt 124  Q
    |||||||||    
T  42972359 tgccgtttt 42972367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 2945504 - 2945559
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||    
T  2945504 attcatcctttttgtttttagcgaatttgcatcgtatcgatgtactctatcaattt 2945559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 7242534 - 7242479
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  7242534 attcatcttttttgtttttagcgaatttgcattgtatcgatgtactctatcaattt 7242479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 16992238 - 16992293
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| | ||| ||||||||||| |||||||||||||||    
T  16992238 attcatcctttttgtttttagcgagttttcattgtatcgatgtactctatcaattt 16992293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 29474076 - 29474009
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||||||| || |||||||| |||||| || ||||||||    
T  29474076 attcatcctttttgtttttagcgaattttcattgtattgatgtactctaccaatttgaatgaatgaat 29474009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 38434964 - 38435031
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| ||||| |||||||| |||| |||||| ||||||||||||||| || ||||||||    
T  38434964 attcatcctttttatttttggcaaattttcattatatcgatgtactctatcaatttgaatgaatgaat 38435031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 41486940 - 41487007
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| | |||| ||||||||||||||| || ||||||||    
T  41486940 attcatcctttttgtttttagcgaatttgcattatttcgatgtactctatcaatttgaatgaatgaat 41487007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 46728668 - 46728613
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||    
T  46728668 attcatcctttttgtttttagcgaattttcattgtatcgatgtactctaccaattt 46728613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 53903945 - 53904012
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||| ||||||| || ||||||||    
T  53903945 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaat 53904012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 30470016 - 30469906
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  30470016 cagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactt 30469917  T
Q  116 tgccgttttat 126  Q
    | |||||||||    
T  30469916 ttccgttttat 30469906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 46716787 - 46716677
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  || |||||| |||| |  ||| ||  |||||||||||||||||||  ||||||  |    
T  46716787 cagatccaatcaatgactttggcgtcatccacgttgcagatccggagatatggctattccggagatttaaatatagtcatatgtgtaggcatttgtacct 46716688  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  46716687 tgccgttttat 46716677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 1657452 - 1657349
Alignment:
Q  23 aatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgccgtt 122  Q
    |||||||||||||   |||||| |||||| |||||  || | ||||||||| || ||| ||  ||||||||||||||||||||||  ||| |||||||||    
T  1657452 aatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccagagacttaaatatagtcatatgtgtaggattcagtattttgccgtt 1657353  T
Q  123 ttat 126  Q
    ||||    
T  1657352 ttat 1657349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 3169751 - 3169798
Alignment:
Q  141 tttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  3169751 tttttgtttttagcgaatttgcattgtatcgatgtactctatcaattt 3169798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 12519985 - 12520040
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| |||||    
T  12519985 attcatcctttttatttttagcgaatttgcattgtatcgatgtactctataaattt 12520040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 23002680 - 23002614
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||| ||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  23002680 attcatcctttttgtttt-agcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 23002614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 30469871 - 30469816
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||| |||||||    
T  30469871 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctttcaattt 30469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 38545905 - 38545834
Alignment:
Q  129 gcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||||| | |||||| | |||||| | ||||| ||||||||| || ||||||||    
T  38545905 gcaaattcatcctttttgtttttaacgaatttatactgtatcaatgtactatatcaatttgaatgaatgaat 38545834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 40861304 - 40861359
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||| ||||||| | ||||| ||||||||||| |||||||||||||||    
T  40861304 attcatccttttcgtttttaacgaattttcattgtatcgatgtactctatcaattt 40861359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 42972404 - 42972459
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||| | ||||| |||| |||||| |||||||||||||||    
T  42972404 attcatcctttttgtttttaacgaatttgcattatatcgatgtactctatcaattt 42972459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 26625442 - 26625516
Alignment:
Q  122 tttatttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaat 196  Q
    |||||| ||| ||||||| |||||||||||||| |||||||||||||| || || || |||||| || |||||||    
T  26625442 tttattcgcatattcatcatttttgtttttagcgaatttacattgtattgatgtcctttatcaaattgaacgaat 26625516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 31601249 - 31601139
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| ||||||||| ||| | ||| | |||| ||||||  ||| ||  ||||||| |||||||||||  ||||||  |    
T  31601249 cagatccaatcaatgactttgacgtcatccacgttgcagacccagagacatggttatttcggagatttaaatatagttatatgtgtaggcatttgtacct 31601150  T
Q  116 tgccgttttat 126  Q
    ||||| |||||    
T  31601149 tgccgctttat 31601139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 46728813 - 46728703
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||| ||||||||||||| | |||||| |||||| | ||   || | ||||||||| || ||| ||  ||||||||||||||||||| ||| ||| ||    
T  46728813 cagatcaaatcaatgactttgaagtcgtcaacgttgcaaattcggagacatgggtattccagagacttaaatatagtcatatgtgtaggctttagtactt 46728714  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  46728713 tgccgttttat 46728703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 50981465 - 50981395
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||| ||||||||||||||| |||||  |||| ||||| ||||| ||||||||| || ||||||||    
T  50981465 caaattcatactttttgtttttagcgaatttgtattgcatcgatgtactatatcaatttgaatgaatgaat 50981395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 10680756 - 10680699
Alignment:
Q  131 aaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||| |||||||||||||| |||||  ||||||||| ||||||||| ||||||    
T  10680756 aaattcatcatttttgtttttagcgaatttgtattgtatcggcgtactctaacaattt 10680699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 10894396 - 10894339
Alignment:
Q  131 aaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||| |||||||||||||| |||||  ||||||||| ||||||||| ||||||    
T  10894396 aaattcatcatttttgtttttagcgaatttgtattgtatcggcgtactctaacaattt 10894339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 1645344 - 1645297
Alignment:
Q  141 tttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  1645344 tttttgtttttagtgaatttgcattgtatcgatgtactctatcaattt 1645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 3673854 - 3673921
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||| |||||||| |||||| |||||||| |||  ||||| ||||||||||||||| || ||||||||    
T  3673854 attcgtcctttttatttttaacaaatttatattacatcgatgtactctatcaatttgaatgaatgaat 3673921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 9474278 - 9474231
Alignment:
Q  141 tttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||| ||||| |||| |||||| |||||||||||||||    
T  9474278 tttttgtttttagcgaatttgcattatatcgatgtactctatcaattt 9474231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 19885714 - 19885659
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||| |||||||||||||||||||||| ||||||| ||  |||| |||||||||    
T  19885714 attcattctttttgtttttagcaaatttaaattgtattgatatactgtatcaattt 19885659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 22066808 - 22066749
Alignment:
Q  129 gcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||| ||| |||||||||||||  |||||  ||||||||||||||||||| ||||||    
T  22066808 gcaaatttatcatttttgtttttagtgaatttgtattgtatcgacgtactctaacaattt 22066749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 29576869 - 29576802
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||| ||||||||||| |||||||| ||  |||| ||||||||| || ||||||||    
T  29576869 attcatcatttttgttattagcaaatttgcattgtattgatatactttatcaatttgaatgaatgaat 29576802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 29589109 - 29589042
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||| | ||||| ||||| ||| | |||||| |||||||| || ||||||||    
T  29589109 attcatcctttttgtttttaacgaattttcattgcatcaatgtactccatcaatttgaatgaatgaat 29589042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 33020675 - 33020608
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||  |||||| |||   |||| ||||||||||||||| || ||||||||    
T  33020675 attcatcctttttgtttttagggaatttatattacttcgatgtactctatcaatttgaatgaatgaat 33020608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 44375015 - 44374956
Alignment:
Q  141 tttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||| | ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  44375015 tttttgtttttaacgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 44374956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 50002941 - 50002874
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||  |||| |||||| ||||| |||| |||| || ||||||||    
T  50002941 attcatcctttttgtttttagcgaattcgcattatatcgatgtactatatctatttgaatgaatgaat 50002874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 54420488 - 54420421
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||  ||||| |||| |||||| ||||| | ||||||| || ||||||||    
T  54420488 attcatcctttttgtttttagtgaatttgcattatatcgatgtactatttcaatttgaatgaatgaat 54420421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 4959321 - 4959255
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||| ||||||||||||| ||||||| ||||||| ||| ||||| ||||||| | || ||||||||    
T  4959321 ttcattctttttgtttttaacaaatttgcattgtaacgatgtactttatcaatatgaatgaatgaat 4959255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 4959467 - 4959357
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||||||  ||||| |||||  || | ||||||||| |  ||| ||| ||||||||||  ||||||  ||||||| ||    
T  4959467 cagatccaatcaatgactttggcgtcgtcagcgttgcagatccggagacatgggtattccgtagacttgaatatagtcatgggtgtagacttttgtactt 4959368  T
Q  116 tgccgttttat 126  Q
    ||| |||||||    
T  4959367 tgcagttttat 4959357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 54420633 - 54420547
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgta 102  Q
    ||||| |||||||||||||| ||||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||    
T  54420633 cagattcaatcaatgactttgacgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcatatgtgta 54420547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 9549808 - 9549865
Alignment:
Q  143 tttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||| |||| |||||| ||||| ||| ||||| || ||||||||    
T  9549808 tttgtttttagcaaatttgcattatatcgatgtactatattaatttgaatgaatgaat 9549865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 10716045 - 10715988
Alignment:
Q  131 aaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||| |||||||||||| | |||||  ||||||||| ||||||||| ||||||    
T  10716045 aaattcatcatttttgtttttaacgaatttgtattgtatcggcgtactctaacaattt 10715988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 10929815 - 10929758
Alignment:
Q  131 aaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||| |||||||||||| | |||||  ||||||||| ||||||||| ||||||    
T  10929815 aaattcatcatttttgtttttaacgaatttgtattgtatcggcgtactctaacaattt 10929758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 18995506 - 18995567
Alignment:
Q  15 acagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttca 76  Q
    |||||| ||||||||||||||| ||||||| |||||| ||||| ||||| |||  |||||||    
T  18995506 acagattcaatcaatgacttttgcgtcgtcaacgttgcagatccagaaacatgaatatttca 18995567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 34115548 - 34115439
Alignment:
Q  17 agatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaattt 116  Q
    ||||||||||||||| |||  |||| || |||||| |||||  || | |||| |||| |  ||| ||  |||||||||||||||||||  |||||| |||    
T  34115548 agatccaatcaatgattttggcgtcatcaacgttgcagatccggagacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtacttt 34115449  T
Q  117 gccgttttat 126  Q
    ||||||||||    
T  34115448 gccgttttat 34115439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 44021474 - 44021433
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatc 57  Q
    |||||||||| ||||||||| ||||||||||||||| |||||    
T  44021474 cagatccaattaatgactttgacgtcgtccacgttgcagatc 44021433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 4622441 - 4622397
Alignment:
Q  144 ttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||| ||||||||  | |||||||||||||||    
T  4622441 ttgtttttagcaaatttgcattgtattaatgtactctatcaattt 4622397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 14346722 - 14346762
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||| ||| |||||||||||||    
T  14346722 atatagtcatatgtgtaggctttagtactttgccgttttat 14346762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 23002755 - 23002715
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  23002755 atatagtcatatgtgtaggcatttgtactttgccgttttat 23002715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 29576944 - 29576904
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| |||||||  ||||||||||||    
T  29576944 atatagtcatatgtgtaggcttttgtaccttgccgttttat 29576904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 40913513 - 40913477
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtat 169  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  40913513 attcatcatttttgtttttagcaaatttatattgtat 40913477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 8e-17; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 26538747 - 26538815
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatga 198  Q
    ||||||||||| ||||||||||||||||||| ||||||||||| |||||| |||||||| || ||||||    
T  26538747 caaattcatccattttgtttttagcaaatttgcattgtatcgatgtactcaatcaatttgaatgaatga 26538815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 9993032 - 9993099
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  9993032 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 9993099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 12248459 - 12248392
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||| || ||||||||    
T  12248459 attcatcctttttgtttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaat 12248392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 16938020 - 16937953
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| || ||||||||    
T  16938020 attcatgctttttgtttttagcgaatttgcattgtatcgatgtactctatcaatttaaatgaatgaat 16937953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 12244109 - 12243999
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| | |||||| | |||| || ||  || ||||||||||| || ||| ||| ||||||| ||||||||||| ||||||| ||    
T  12244109 cagatccaatcaatgactttgatgtcgtcaatgttgcagttccggagatatgggtattccagagacttgaatatagttatatgtgtaggcttttgtactt 12244010  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  12244009 tgtcgttttat 12243999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 15665900 - 15665974
Alignment:
Q  126 tttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| |||| |||||||||||||| || ||||| ||||||||||| ||||||||||||||| || ||||||||    
T  15665900 tttgcagattcgtcctttttgtttttggcgaatttgcattgtatcgatgtactctatcaatttgaatgaatgaat 15665974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 37129568 - 37129458
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  |||| |||| |||| | |||| ||  |||||||||||||||||||  |||||| ||    
T  37129568 cagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccgaagatttaaatatagtcatatgtgtaggcatttgtactt 37129469  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  37129468 tgacgttttat 37129458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 37659220 - 37659293
Alignment:
Q  127 ttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||| ||||||| |||||||||||||| ||||| ||||||||||| |||||||| |||||| || ||||||||    
T  37659220 ttgcagattcatcatttttgtttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaat 37659293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 16809090 - 16809194
Alignment:
Q  22 caatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgccgt 121  Q
    |||||||||||||| |||| |||||||||| ||||| ||||| ||| ||||| |  ||| ||| ||||||||||||||||||| || |||| ||||  ||    
T  16809090 caatcaatgactttgacgttgtccacgttgcagatccagaaacatgagtattccggagacttgaatatagtcatatgtgtaggcttctgtactttgttgt 16809189  T
Q  122 tttat 126  Q
    |||||    
T  16809190 tttat 16809194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 5457437 - 5457504
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| |||||| ||| |||||| ||||||||||||||| || ||||||||    
T  5457437 attcatcatttttgtttttagcgaatttatattatatcgatgtactctatcaatttgaatgaatgaat 5457504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 9270386 - 9270453
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||  |||||||||| |||||||||| |||||| ||||||||||||||| || ||||||||    
T  9270386 attcatccttgatgtttttagcgaatttacattatatcgatgtactctatcaatttgaatgaatgaat 9270453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 32413156 - 32413223
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||| | ||||||||||||||| || ||||||||    
T  32413156 attcatcctttttgtttttagcgaatttgcattatatcaatgtactctatcaatttgaatgaatgaat 32413223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 41996909 - 41996976
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||||| |||||||| || ||||||||    
T  41996909 attcatcctttttgtttttagcgaatttgcattatatcgatgtactcgatcaatttaaatgaatgaat 41996976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 44295682 - 44295749
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  44295682 attcatcatttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 44295749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 13977785 - 13977843
Alignment:
Q  142 ttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||||||    
T  13977785 ttttgtttttagtgaatttgcattgtatcgatgtactctatcaatttgaacgaatgaat 13977843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 31712824 - 31712755
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattg--tatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||||  |||||| ||||||||||||||| || ||||||||    
T  31712824 attcatcctttttgtttttagcgaattttcattgtatatcgatgtactctatcaatttgaatgaatgaat 31712755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 1215092 - 1215023
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaa 199  Q
    |||||||||| |||||||||||||| |||||  |||| ||||| ||||||||||||||| || |||||||    
T  1215092 caaattcatcatttttgtttttagcgaatttgtattgcatcgatgtactctatcaatttaaatgaatgaa 1215023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 10043143 - 10043191
Alignment:
Q  140 ctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  10043143 ctttttgtttttagcgaattttcattgtatcgatgtactctatcaattt 10043191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 8054556 - 8054489
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| |||||  ||| |||||| ||| ||||||||||| || ||||||||    
T  8054556 attcatcctttttgtttttagcgaatttgtattatatcgatgtattctatcaatttgaatgaatgaat 8054489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 12243964 - 12243897
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| |||||||  ||||| |||| |||||| ||||||||||| ||| |||||||||||    
T  12243964 attcatcctttttatttttagtgaatttgcattatatcgatgtactctatcagtttgaacgaatgaat 12243897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 16937087 - 16937020
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| |||| ||| ||||| ||||||||||| |||||||| |||||| || ||||||||    
T  16937087 attcatcctttttattttaagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaat 16937020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 27989044 - 27989111
Alignment:
Q  122 tttatttgcaaattcatcctttttg-tttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||| |||||||||||||  |||||||  |||||| |||||||||| |||||||||||||||    
T  27989044 tttatttgcatattcatccttttttatttttagttaatttatattgtatcgatgtactctatcaattt 27989111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 28046346 - 28046413
Alignment:
Q  122 tttatttgcaaattcatcctttttg-tttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||| |||||||||||||  |||||||  |||||| |||||||||| |||||||||||||||    
T  28046346 tttatttgcatattcatccttttttatttttagttaatttatattgtatcgatgtactctatcaattt 28046413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 32104585 - 32104518
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||| | ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  32104585 attcatcatttttgtttttaacgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 32104518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 32256469 - 32256414
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||| ||||||||| ||||| ||||||||||| ||||||| |||||||    
T  32256469 attcatccttttcgtttttagcgaattttcattgtatcgatgtactctgtcaattt 32256414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 37720206 - 37720260
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||    
T  37720206 attcatcctttttatttttagcgaatttacattg-atcgatgtactctatcaattt 37720260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 12248604 - 12248494
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||| |||||||||||||   |||||| || ||| ||||  ||| | ||||||||| || ||| ||  ||||||||||||||||||| ||| ||| ||    
T  12248604 cagatcaaatcaatgactttggagtcgtcaactttgcagattcagagacatgggtattccagagacttaaatatagtcatatgtgtaggctttagtattt 12248505  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  12248504 tgccgttttat 12248494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 18197039 - 18196929
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||| |||||||||| |||||||| |||||| |||||  || | || | |||| |||||| ||  |||||||||||| |||||  || |||| ||    
T  18197039 cagatccaaccaatgactttgacgtcgtcaacgttgcagatccggagacatcgctattccaaagactttaatatagtcatatttgtagtcttctgtactt 18196940  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  18196939 tgccgttttat 18196929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 44295537 - 44295647
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||||||||||||||||| ||||| ||||||||| |||||  || | |||| |||| |  ||| ||  |||||||||||| ||||||   ||||| ||    
T  44295537 cagatccaatcaatgactttgacgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatatgtaggcaattgtactt 44295636  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  44295637 tgccgttttat 44295647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 5328306 - 5328380
Alignment:
Q  124 tatttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||| || |||||||||||||  ||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  5328306 tatttacagattcatccttttt--ttttagcgaatttgcattatatcgatgtactctatcaatttaaaagaatgaat 5328380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 23970931 - 23970866
Alignment:
Q  133 attcatcctttttgtttttagcaaatttac-attgtatcgacgtactctatcaattttaacgaatg 197  Q
    ||||||||||||||||||||||  ||||   |||||||||| ||||||||||||||| ||||||||    
T  23970931 attcatcctttttgtttttagcggatttggtattgtatcgatgtactctatcaatttgaacgaatg 23970866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 2629276 - 2629331
Alignment:
Q  131 aaattcatcctttttgtttttagcaaatttacattgtatc-gacgtactctatcaa 185  Q
    |||||||||||||||||||| ||| ||||| ||||||||| || ||||||||||||    
T  2629276 aaattcatcctttttgttttcagctaattttcattgtatcggatgtactctatcaa 2629331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 7269218 - 7269159
Alignment:
Q  129 gcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||||||| |||||| | |||||  |||||||||| | |||||||||||||    
T  7269218 gcaaattcatcctttttatttttatcgaatttgtattgtatcgatgaactctatcaattt 7269159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 9799855 - 9799808
Alignment:
Q  65 atgggtatttcaaagagttgtatatagtcatatgtgtaggattttgta 112  Q
    ||||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  9799855 atgggtattccaaagatttgaatatagtcatatgtgtaggcttttgta 9799808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 18190599 - 18190532
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| ||||||||||||||| |||||  |||| ||||| ||||||||| ||||| || ||||||||    
T  18190599 attcattctttttgtttttagcgaatttgtattgcatcgatgtactctattaatttgaatgaatgaat 18190532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 31147721 - 31147686
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttg 51  Q
    |||||||||||||||||||| |||||||||||||||    
T  31147721 cagatccaatcaatgactttgacgtcgtccacgttg 31147686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 8054700 - 8054591
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||| ||| |||||  || | |||| |||| | |||| ||  |||||||||||||||||||  ||||||  |    
T  8054700 cagatccaatcaatgactttggcgtcatccac-ttgcagatccggagacatggctattccgaagatttaaatatagtcatatgtgtaggcatttgtacct 8054602  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  8054601 tgccgttttat 8054591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 37720061 - 37720171
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||| |||||| ||||||  | || || |||||| ||||| ||| | || |||||| |  ||| ||| ||||||||||||||||||| ||||||| ||    
T  37720061 cagatctaatcaaagactttggcttcatcaacgttgcagatccagagacataggtattccgtagacttgaatatagtcatatgtgtaggcttttgtactt 37720160  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  37720161 tgtcgttttat 37720171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 283757 - 283697
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaa 195  Q
    |||||| |||||||||||||| ||||| ||||||||| | ||||||||||| ||| ||||||    
T  283757 ttcatcttttttgtttttagcgaatttgcattgtatc-atgtactctatcattttgaacgaa 283697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 632120 - 632180
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaa 195  Q
    |||||| |||||||||||||| ||||| ||||||||| | ||||||||||| ||| ||||||    
T  632120 ttcatcttttttgtttttagcgaatttgcattgtatc-atgtactctatcattttgaacgaa 632180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 817932 - 817992
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaa 195  Q
    |||||| |||||||||||||| ||||| ||||||||| | ||||||||||| ||| ||||||    
T  817932 ttcatcttttttgtttttagcgaatttgcattgtatc-atgtactctatcattttgaacgaa 817992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 2629201 - 2629241
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||||||| ||| |||| ||||||||    
T  2629201 atatagtcatatgtgtaggatttagtactttgtcgttttat 2629241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 5989904 - 5989944
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||||||| |||| ||||||||    
T  5989904 atatagtcatatgtgtaggcttttgtactttgtcgttttat 5989944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 36545532 - 36545475
Alignment:
Q  130 caaattcatccttttt-gtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||| ||||||||| ||||| ||||  ||||| |||||||||||||||    
T  36545532 caaattcatccttttttgtttttagcgaatttgcatt--atcgatgtactctatcaattt 36545475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 36890 - 36957
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||| |||||||||||| |||| | ||||||||||||||| || ||||||||    
T  36890 attcatcctttttgtttttaacaaatttacattatatcaatgtactctatcaatttgaatgaatgaat 36957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 29310102 - 29310035
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  29310102 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 29310035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 31646195 - 31646262
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  31646195 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 31646262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 40564908 - 40564838
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||| ||||||||||||||||||||  |||| ||||| ||||||||||||||| || ||||||||    
T  40564908 caaattcatcttttttgtttttagcaaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 40564838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 40775128 - 40775194
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||  |||||||||||||| ||||||||||| ||||||||||||||| || ||||||||    
T  40775128 ttcatccttttaatttttagcaaattttcattgtatcgatgtactctatcaatttgaatgaatgaat 40775194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 28662438 - 28662503
Alignment:
Q  135 tcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||| || ||||||||    
T  28662438 tcatcatttttgtttttagcgaattttcattgtatcgacgtactctttcaatttgaatgaatgaat 28662503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 3495212 - 3495275
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaat 196  Q
    ||||||| |||||||||||||| ||||| |||| |||||| ||||||||||||||| |||||||    
T  3495212 attcatcatttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaacgaat 3495275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 5378668 - 5378735
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||| ||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  5378668 attcatcctttttgattttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 5378735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 6886926 - 6886859
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| ||||| |||| |||||| ||||||||||||||| || ||||||||    
T  6886926 attcatcatttttgtttttagcgaatttgcattatatcgatgtactctatcaatttaaatgaatgaat 6886859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 28618968 - 28619035
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||||| ||||||| || ||||||||    
T  28618968 attcatcctttttgtttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaat 28619035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 41358400 - 41358467
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||| ||||||||||| | |||||||||| |||||| ||||||||||||||| || ||||||||    
T  41358400 attcatccgttttgtttttaacgaatttacattatatcgatgtactctatcaatttgaatgaatgaat 41358467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 28501056 - 28501110
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||    
T  28501056 ttcatcctttttattttcagcgaatttacattgtatcgatgtactctatcaattt 28501110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 28618823 - 28618933
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  |||| |||| ||||||  | | ||  |||||||||||||||||||  |||||| ||    
T  28618823 cagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttatttcggaaatttaaatatagtcatatgtgtaggcatttgtactt 28618922  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  28618923 tgtcgttttat 28618933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 8957569 - 8957626
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaatt 187  Q
    ||||||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||    
T  8957569 caaattcatcctttttgtttttagctaacttatattgcatcgatgtactctatcaatt 8957626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 6647672 - 6647608
Alignment:
Q  122 tttatttgcaaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaat 186  Q
    |||||| ||| ||||||| |||||||||||||| ||||| ||||||||||| ||| |||||||||    
T  6647672 tttattcgcagattcatcatttttgtttttagcgaatttgcattgtatcgatgtattctatcaat 6647608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 37219369 - 37219436
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaatt 201  Q
    |||||||||||||||||| ||| ||||| ||||||||| | ||||||||||||||| || |||||||||    
T  37219369 attcatcctttttgtttt-agcgaattttcattgtatcaatgtactctatcaatttgaatgaatgaatt 37219436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 41554857 - 41554917
Alignment:
Q  137 atcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatg 197  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||| |||||| || |||||    
T  41554857 atcctttttgtttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatg 41554917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 6074484 - 6074417
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| |||||  |||| ||||| ||||||||||||| | || ||||||||    
T  6074484 attcatcctttttgtttttagcgaatttgtattgcatcgatgtactctatcaatgtgaatgaatgaat 6074417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 14910424 - 14910357
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| |||||  |||||||||  |||||||| |||||| || ||||||||    
T  14910424 attcatcctttttgtttttagcgaatttttattgtatcgttgtactctaacaatttgaatgaatgaat 14910357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 17325412 - 17325345
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| ||||||||||||||||||||  |||| ||||| ||| ||||||||||| || ||||||||    
T  17325412 attcatcttttttgtttttagcaaatttgtattgcatcgatgtaatctatcaatttgaatgaatgaat 17325345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 34844282 - 34844337
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||| |||||||||||||| ||||| |||||||| || |||||||||||||||    
T  34844282 attcatcatttttgtttttagcgaattttcattgtatagatgtactctatcaattt 34844337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 34874216 - 34874283
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||||||| || | ||||||| ||||| || ||||||||    
T  34874216 attcatcctttttgtttttagcgaatttgcattgtattgatgcactctattaatttaaatgaatgaat 34874283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 4070772 - 4070874
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||||||| |||||  |||| |||| |||| |  ||| ||  |||||||||||||||||||  |||||| ||    
T  4070772 cagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggtatttgtactt 4070871  T
Q  116 tgc 118  Q
    |||    
T  4070872 tgc 4070874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 28389000 - 28388891
Alignment:
Q  17 agatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaattt 116  Q
    ||||| |||||||||||||   |||||||| |||| ||||| ||| ||||||||||| |  ||| ||| ||||| ||||||||||||  ||||||| |||    
T  28389000 agatcaaatcaatgactttggtgtcgtccatgttgcagatccagagatatgggtattccggagacttgaatataatcatatgtgtagacttttgtatttt 28388901  T
Q  117 gccgttttat 126  Q
    |  |||||||    
T  28388900 gttgttttat 28388891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 10923882 - 10923815
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| |||||| ||| ||| |||| ||| || ||||||||||||||| || ||||||||    
T  10923882 attcatcctttttatttttaacaattttgcattatattgatgtactctatcaatttgaatgaatgaat 10923815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 15710910 - 15710977
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||| ||||||  ||||| |||||||| || ||| ||||||||||| || ||||||||    
T  15710910 attcatcctttttggttttagtgaatttgcattgtattgatgtattctatcaatttgaatgaatgaat 15710977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 17218090 - 17218156
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||  ||||||||| |||||  |||||||||| ||||||||||||||| || ||||||||    
T  17218090 attcatcctttc-gtttttagcgaatttttattgtatcgatgtactctatcaatttgaatgaatgaat 17218156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 18472474 - 18472419
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||| |||||||||||||| || || ||||||||||| |||||||| ||||||    
T  18472474 attcatcatttttgtttttagcgaactttcattgtatcgatgtactctaccaattt 18472419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 19645784 - 19645718
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||||| |||| |||| || ||||||||    
T  19645784 attcatcctttttgtttttagcgaatttgcattatatcgatgtact-tatcgatttgaatgaatgaat 19645718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 20271089 - 20271148
Alignment:
Q  141 tttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||| ||||| ||||||||||| ||||||||  ||||| || ||||||||    
T  20271089 tttttgtttttagcgaattttcattgtatcgatgtactctactaatttgaatgaatgaat 20271148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 33486317 - 33486250
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||| |||||||||||||| |||||  ||| |||||| ||| ||||||||||| || ||||||||    
T  33486317 attcatcatttttgtttttagcgaatttttattttatcgatgtattctatcaatttgaatgaatgaat 33486250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 35906635 - 35906702
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||| ||||| ||||||||| ||||| |||| ||| || ||||||||||||||| || ||||||||    
T  35906635 attcatacttttagtttttagcgaatttgcattatattgatgtactctatcaatttgaatgaatgaat 35906702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 2415765 - 2415835
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||||||||| |||||||  ||||| ||||  |||||  |||||||||||||| || ||||||||    
T  2415765 caaattcatcctttttatttttagtgaatttgcattacatcgatatactctatcaatttgaatgaatgaat 2415835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 8811903 - 8811845
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||| |||| ||||||||| || || ||||||||| | |||||||||||||||    
T  8811903 caaattcatcattttcgtttttagcgaactttcattgtatcaatgtactctatcaattt 8811845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 9034679 - 9034629
Alignment:
Q  147 tttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatg 197  Q
    |||||||| ||||| ||||||||||| ||||||||||||||| || |||||    
T  9034679 tttttagcgaatttgcattgtatcgatgtactctatcaatttgaatgaatg 9034629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 35906490 - 35906600
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||||||||||||||||||  |||| ||||| ||| |||||  || | |||| ||||||  ||| ||  |||||||||||||||||||   ||||| ||    
T  35906490 cagatccaatcaatgactttggcgtcatccacattgcagatccggatacatggttatttcggagatttaaatatagtcatatgtgtaggcaattgtattt 35906589  T
Q  116 tgccgttttat 126  Q
    || ||||||||    
T  35906590 tgtcgttttat 35906600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 41554708 - 41554818
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    |||||| |||||||||||||    ||||| |||||| |||||  || | ||||||||| |  ||| ||  ||||||||||||||||||| ||| ||| ||    
T  41554708 cagatcaaatcaatgactttggaatcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactt 41554807  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  41554808 tgccgttttat 41554818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 8811975 - 8811935
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||| ||| |||||||||||||    
T  8811975 atatagtcatatgtgtaggctttagtactttgccgttttat 8811935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 34844207 - 34844247
Alignment:
Q  86 atatagtcatatgtgtaggattttgtaatttgccgttttat 126  Q
    ||||||||||||||||||| ||| ||| |||||||||||||    
T  34844207 atatagtcatatgtgtaggctttagtactttgccgttttat 34844247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 9551 - 9441
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatt 115  Q
    ||||| ||||||||||||||  |||| ||||||||| |||||  |||| |||| |||| | |||| ||  |||||||||||||||||||  |||||| ||    
T  9551 cagattcaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccgaagatttaaatatagtcatatgtgtaggcatttgtactt 9452  T
Q  116 tgccgttttat 126  Q
    |||||||||||    
T  9451 tgccgttttat 9441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 1672 - 1602
Alignment:
Q  130 caaattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    |||||||||| |||||||||||| | ||||| |||| |||| | ||||||| ||||||| || ||||||||    
T  1672 caaattcatcttttttgtttttaacgaatttgcattatatcaatgtactctttcaatttgaatgaatgaat 1602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 999 - 1106
Alignment:
Q  19 atccaatcaatgacttttacgtcgtccacgttgtagatcaagaaatatgggtatttcaaagagttgtatatagtcatatgtgtaggattttgtaatttgc 118  Q
    ||||||||||||||||| |||||||| | |||| | |||   | | ||||||||| | | || ||| ||||||||||||||||||| ||||||| ||||     
T  999 atccaatcaatgactttgacgtcgtcaatgttgcatatccgcatacatgggtattccgatgacttgaatatagtcatatgtgtaggcttttgtactttgt 1098  T
Q  119 cgttttat 126  Q
    ||||||||    
T  1099 cgttttat 1106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 2182 - 2115
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||| |||||||| |||||  |||||||||| ||||| ||||||||| || ||||||||    
T  2182 attcatcctttttatttttagcgaatttgtattgtatcgatgtactttatcaatttgaatgaatgaat 2115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 11951 - 11896
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||||||||||| ||||| ||||  ||||| |||||||||||||||    
T  11951 attcatcctttttgtttttagcgaatttgcattacatcgatgtactctatcaattt 11896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 926 - 871
Alignment:
Q  133 attcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| |||||    
T  926 attcatcctttttatttttagcgaatttgcattgtatcgatgtactctataaattt 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 3276 - 3349
Alignment:
Q  133 attcatcctttttgtttttagc------aaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||      ||||||| |||||||||| ||||||||||||||| || ||||||||    
T  3276 attcatcctttttgtttttagcgaatttaaatttatattgtatcgatgtactctatcaatttgaatgaatgaat 3349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 105413 - 105479
Alignment:
Q  134 ttcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||| |||||  |||| ||||| ||||| ||||||||| || ||||||||    
T  105413 ttcatcctttttgtttttagcgaatttgtattgcatcgatgtactatatcaatttgaatgaatgaat 105479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 5268 - 5207
Alignment:
Q  139 cctttttgtttttagcaaatttacattgtatcgacgtactctatcaattttaacgaatgaat 200  Q
    ||||||||||||||||||||||  ||| |||||| ||||||||| ||||| || ||||||||    
T  5268 cctttttgtttttagcaaatttgtattatatcgatgtactctataaatttgaatgaatgaat 5207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 244857 - 244897
Alignment:
Q  16 cagatccaatcaatgacttttacgtcgtccacgttgtagat 56  Q
    ||||||||||||||||||||  |||| ||||||||||||||    
T  244857 cagatccaatcaatgactttggcgtcatccacgttgtagat 244897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 11376 - 11432
Alignment:
Q  132 aattcatcctttttgtttttagcaaatttacattgtatcgacgtactctatcaattt 188  Q
    |||||||||||||| |||||||  ||||| |||| ||| || |||||||||||||||    
T  11376 aattcatcctttttatttttagtgaatttgcattatatagatgtactctatcaattt 11432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University