View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11447_high_26 (Length: 237)
Name: NF11447_high_26
Description: NF11447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11447_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 33976442 - 33976667
Alignment:
| Q |
1 |
cggtcaatttttaaccattacaaataatattgttgtcaagatttatttcagaacgttccacttcaagtctccaaccacatttctgtttggtttaaaagag |
100 |
Q |
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| T |
33976442 |
cggtcaatttttaaccattacaaataatattgttgtcaagatttatttcataacgttccacttcaagtctccaaccacatttctgtttggtttaaaagag |
33976541 |
T |
|
| Q |
101 |
tgaaaaacatatgcttggtccaacaatagttttaacttatgtacaatgaatatt----attcatgccataatcattgtatgtttggtttggttgtgccta |
196 |
Q |
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|||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
33976542 |
tgaaaaacatatgcttggtccaacaatagttttagct--tgtacaatgaatattattaattcatgccataatcattgtatgtttggtttggttgtgccta |
33976639 |
T |
|
| Q |
197 |
ataccaatataactaattactagtttat |
224 |
Q |
| |
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|||||||||||||||||||||||||||| |
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|
| T |
33976640 |
ataccaatataactaattactagtttat |
33976667 |
T |
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