View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11447_high_29 (Length: 206)
Name: NF11447_high_29
Description: NF11447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11447_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 20119971 - 20119782
Alignment:
| Q |
1 |
tcattttctcaaattattatcggcatcacatgtcaggtgtccgtgtctggtttcgtacttcatagataaaattcaaaacaccaaaatttccaaaaacatt |
100 |
Q |
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| T |
20119971 |
tcattttctcaaattattatcggcatcacatgtcaggtgtccgtgtctggtttcgtacttcatagataaaattcaaaacaccaaaatttccaaaaacatt |
20119872 |
T |
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| Q |
101 |
tcgaattatacctaaaccaggaaaatctcttagctcatatttcatatgagcatgcctagacgcaaatccttcatcatcaacaaccaaacc |
190 |
Q |
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| T |
20119871 |
tcgaattatacctaaaccaggaaaatctcttagctcatatttcatatgagcatgcctagacgcaaatccttcatcatcaacaaccaaacc |
20119782 |
T |
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