View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1144_high_27 (Length: 252)

Name: NF1144_high_27
Description: NF1144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1144_high_27
NF1144_high_27
[»] chr4 (68 HSPs)
chr4 (10-163)||(42395617-42395766)
chr4 (106-212)||(3465594-3465697)
chr4 (106-208)||(20266877-20266977)
chr4 (117-212)||(24234066-24234158)
chr4 (148-210)||(30369359-30369421)
chr4 (121-212)||(32885699-32885787)
chr4 (117-212)||(47017938-47018030)
chr4 (121-212)||(53291453-53291541)
chr4 (105-208)||(534744-534845)
chr4 (117-212)||(5430356-5430449)
chr4 (106-212)||(10098136-10098239)
chr4 (117-204)||(39992855-39992938)
chr4 (106-207)||(44074869-44074967)
chr4 (148-212)||(45350287-45350352)
chr4 (148-212)||(45359766-45359831)
chr4 (148-212)||(51077878-51077943)
chr4 (104-208)||(35451100-35451201)
chr4 (117-212)||(34773675-34773767)
chr4 (121-208)||(35803089-35803173)
chr4 (178-212)||(6053991-6054025)
chr4 (178-212)||(9172421-9172455)
chr4 (110-212)||(13211337-13211436)
chr4 (178-212)||(50657891-50657925)
chr4 (178-211)||(548937-548970)
chr4 (178-211)||(6365336-6365369)
chr4 (148-212)||(26253963-26254028)
chr4 (179-212)||(35031394-35031427)
chr4 (120-212)||(44374074-44374164)
chr4 (180-212)||(4722516-4722548)
chr4 (176-208)||(9285707-9285739)
chr4 (116-212)||(31601817-31601910)
chr4 (152-211)||(35333011-35333071)
chr4 (114-210)||(43336974-43337067)
chr4 (109-212)||(52608552-52608651)
chr4 (181-212)||(3544485-3544516)
chr4 (121-212)||(12856195-12856283)
chr4 (117-212)||(21476073-21476165)
chr4 (121-212)||(38433322-38433410)
chr4 (181-212)||(40200809-40200840)
chr4 (178-209)||(48309159-48309190)
chr4 (106-212)||(3442854-3442957)
chr4 (178-212)||(5635200-5635234)
chr4 (178-212)||(9924867-9924901)
chr4 (110-212)||(10757760-10757859)
chr4 (110-212)||(10970931-10971030)
chr4 (180-210)||(12868078-12868108)
chr4 (178-212)||(33944413-33944447)
chr4 (148-202)||(41003191-41003245)
chr4 (178-212)||(43115279-43115313)
chr4 (178-212)||(43606150-43606184)
chr4 (178-212)||(46735019-46735053)
chr4 (178-208)||(52560779-52560809)
chr4 (178-212)||(53698030-53698064)
chr4 (117-212)||(54304921-54305012)
chr4 (178-212)||(55266485-55266519)
chr4 (178-208)||(56314776-56314806)
chr4 (178-208)||(56546499-56546529)
chr4 (118-203)||(37032172-37032254)
chr4 (179-212)||(46482868-46482901)
chr4 (179-212)||(50783485-50783518)
chr4 (148-203)||(8690234-8690290)
chr4 (148-199)||(23518274-23518326)
chr4 (182-210)||(31578032-31578060)
chr4 (180-212)||(35909215-35909247)
chr4 (148-215)||(36576272-36576340)
chr4 (180-212)||(42558908-42558940)
chr4 (178-210)||(49089327-49089359)
chr4 (181-209)||(52743242-52743270)
[»] chr6 (39 HSPs)
chr6 (118-212)||(22389743-22389834)
chr6 (104-212)||(35190774-35190879)
chr6 (117-212)||(12089108-12089200)
chr6 (148-210)||(21507220-21507283)
chr6 (106-212)||(12127890-12127993)
chr6 (106-212)||(30566069-30566172)
chr6 (117-212)||(8233097-8233189)
chr6 (106-212)||(34396094-34396197)
chr6 (119-212)||(5288339-5288429)
chr6 (117-210)||(6652223-6652312)
chr6 (104-212)||(7563555-7563660)
chr6 (116-212)||(18244004-18244096)
chr6 (117-212)||(15288947-15289039)
chr6 (117-212)||(18904675-18904767)
chr6 (178-212)||(9438313-9438347)
chr6 (178-212)||(22501029-22501063)
chr6 (148-212)||(16801800-16801865)
chr6 (180-212)||(10377176-10377208)
chr6 (119-212)||(11982773-11982862)
chr6 (180-212)||(19165362-19165394)
chr6 (116-212)||(15126254-15126346)
chr6 (181-212)||(19642600-19642631)
chr6 (109-212)||(20716376-20716476)
chr6 (181-212)||(24623533-24623564)
chr6 (117-212)||(25020520-25020612)
chr6 (178-212)||(6025436-6025470)
chr6 (178-212)||(9491785-9491819)
chr6 (120-210)||(16251518-16251605)
chr6 (178-208)||(23771048-23771078)
chr6 (178-212)||(26878811-26878845)
chr6 (178-212)||(31741513-31741547)
chr6 (178-212)||(34365746-34365780)
chr6 (149-201)||(11636685-11636738)
chr6 (178-211)||(12101898-12101931)
chr6 (120-209)||(19417836-19417922)
chr6 (178-210)||(10373608-10373640)
chr6 (117-201)||(10424527-10424608)
chr6 (178-210)||(26528580-26528612)
chr6 (180-212)||(32057045-32057077)
[»] chr7 (45 HSPs)
chr7 (117-212)||(38792223-38792315)
chr7 (106-212)||(2366368-2366471)
chr7 (106-212)||(21086115-21086218)
chr7 (106-212)||(47552224-47552327)
chr7 (106-212)||(14967614-14967718)
chr7 (106-212)||(15397090-15397194)
chr7 (116-212)||(7262989-7263082)
chr7 (108-209)||(22741217-22741317)
chr7 (177-212)||(4590655-4590690)
chr7 (117-212)||(27907888-27907980)
chr7 (117-212)||(30644180-30644272)
chr7 (117-212)||(34948117-34948209)
chr7 (178-212)||(22047531-22047565)
chr7 (178-212)||(27047765-27047799)
chr7 (178-212)||(38778729-38778763)
chr7 (116-210)||(45011649-45011740)
chr7 (106-212)||(45198079-45198182)
chr7 (178-212)||(46337918-46337952)
chr7 (148-212)||(22706047-22706112)
chr7 (148-197)||(23430857-23430906)
chr7 (148-212)||(32814838-32814903)
chr7 (107-212)||(42887165-42887267)
chr7 (148-212)||(49012409-49012474)
chr7 (120-208)||(2261479-2261564)
chr7 (178-210)||(17900929-17900961)
chr7 (108-208)||(22965941-22966038)
chr7 (180-212)||(34962024-34962056)
chr7 (180-212)||(46716344-46716376)
chr7 (117-212)||(29710093-29710184)
chr7 (182-212)||(4818031-4818061)
chr7 (178-208)||(5787476-5787506)
chr7 (178-212)||(8195926-8195960)
chr7 (178-212)||(23685604-23685638)
chr7 (178-212)||(24396956-24396990)
chr7 (178-212)||(25818297-25818331)
chr7 (178-212)||(31279356-31279390)
chr7 (178-212)||(36176882-36176916)
chr7 (178-212)||(36316024-36316058)
chr7 (178-212)||(44437875-44437909)
chr7 (179-212)||(8725188-8725221)
chr7 (148-212)||(31694082-31694146)
chr7 (120-208)||(4042263-4042348)
chr7 (184-212)||(30152752-30152780)
chr7 (106-202)||(38451884-38451977)
chr7 (180-212)||(43970905-43970937)
[»] chr3 (45 HSPs)
chr3 (117-212)||(36727455-36727546)
chr3 (104-212)||(35483280-35483385)
chr3 (117-212)||(23820640-23820732)
chr3 (117-209)||(13616066-13616155)
chr3 (117-208)||(14417883-14417971)
chr3 (117-212)||(20623769-20623861)
chr3 (117-212)||(33206768-33206860)
chr3 (117-212)||(49146095-49146187)
chr3 (106-212)||(13539945-13540048)
chr3 (121-210)||(45713493-45713579)
chr3 (116-212)||(2564932-2565025)
chr3 (152-212)||(47062090-47062150)
chr3 (148-212)||(53467960-53468024)
chr3 (117-212)||(34344770-34344861)
chr3 (117-212)||(43566788-43566880)
chr3 (178-212)||(20244145-20244179)
chr3 (178-212)||(32876166-32876200)
chr3 (178-212)||(35849329-35849363)
chr3 (148-212)||(21420208-21420273)
chr3 (179-212)||(29507228-29507261)
chr3 (179-212)||(34503226-34503259)
chr3 (119-212)||(42271007-42271097)
chr3 (180-212)||(41121882-41121914)
chr3 (117-212)||(17269311-17269402)
chr3 (178-209)||(17440015-17440046)
chr3 (149-212)||(19117469-19117532)
chr3 (117-212)||(32508786-32508878)
chr3 (181-212)||(40786291-40786322)
chr3 (117-212)||(48173297-48173389)
chr3 (178-212)||(16278001-16278035)
chr3 (178-212)||(24751310-24751344)
chr3 (178-212)||(33072301-33072335)
chr3 (104-202)||(35477752-35477847)
chr3 (178-212)||(49639039-49639073)
chr3 (148-212)||(4072752-4072817)
chr3 (148-212)||(8475426-8475491)
chr3 (109-146)||(14271911-14271948)
chr3 (179-212)||(19540352-19540385)
chr3 (148-212)||(32665292-32665357)
chr3 (180-209)||(47427739-47427768)
chr3 (183-212)||(50720433-50720462)
chr3 (183-212)||(50792386-50792415)
chr3 (106-146)||(8175834-8175874)
chr3 (106-202)||(36331707-36331800)
chr3 (148-208)||(48659840-48659899)
[»] chr2 (50 HSPs)
chr2 (119-212)||(33001547-33001637)
chr2 (116-212)||(9791886-9791979)
chr2 (119-202)||(9802913-9802996)
chr2 (148-211)||(35502092-35502156)
chr2 (109-212)||(16028092-16028192)
chr2 (117-212)||(22297444-22297536)
chr2 (117-212)||(30474187-30474279)
chr2 (117-212)||(32891292-32891384)
chr2 (106-212)||(9547108-9547211)
chr2 (106-212)||(10207656-10207759)
chr2 (148-208)||(44422122-44422183)
chr2 (104-212)||(17239912-17240017)
chr2 (106-202)||(29664624-29664717)
chr2 (117-212)||(580775-580867)
chr2 (117-212)||(20122467-20122559)
chr2 (117-212)||(22538550-22538642)
chr2 (117-208)||(36426848-36426936)
chr2 (120-202)||(9796918-9796997)
chr2 (178-212)||(10262750-10262784)
chr2 (178-212)||(26807134-26807168)
chr2 (178-212)||(27495549-27495583)
chr2 (178-212)||(31564106-31564140)
chr2 (106-212)||(32943350-32943453)
chr2 (148-212)||(36520799-36520864)
chr2 (117-212)||(11133086-11133179)
chr2 (117-209)||(17154663-17154752)
chr2 (178-210)||(24034103-24034135)
chr2 (181-212)||(36481080-36481111)
chr2 (151-209)||(41711658-41711717)
chr2 (117-212)||(44721696-44721788)
chr2 (178-212)||(3179335-3179369)
chr2 (178-212)||(7086264-7086298)
chr2 (178-212)||(15690084-15690118)
chr2 (118-208)||(18386805-18386892)
chr2 (178-208)||(19052661-19052691)
chr2 (106-208)||(19905636-19905735)
chr2 (178-212)||(25050290-25050324)
chr2 (116-201)||(25731956-25732041)
chr2 (178-212)||(31956877-31956911)
chr2 (178-212)||(36665441-36665475)
chr2 (178-212)||(38530245-38530279)
chr2 (106-212)||(38820586-38820688)
chr2 (178-212)||(39726484-39726518)
chr2 (183-212)||(1836599-1836628)
chr2 (117-210)||(3364738-3364828)
chr2 (183-212)||(15392266-15392295)
chr2 (108-209)||(34620532-34620630)
chr2 (179-212)||(42091325-42091358)
chr2 (178-210)||(18364425-18364457)
chr2 (148-203)||(43870973-43871029)
[»] chr5 (47 HSPs)
chr5 (108-212)||(23925554-23925655)
chr5 (117-212)||(29096300-29096392)
chr5 (106-212)||(36888074-36888177)
chr5 (104-212)||(42455373-42455478)
chr5 (117-212)||(6671778-6671870)
chr5 (117-208)||(20945883-20945971)
chr5 (117-211)||(1244719-1244810)
chr5 (147-212)||(29050811-29050877)
chr5 (117-210)||(6014792-6014882)
chr5 (152-212)||(29144153-29144214)
chr5 (152-212)||(43404393-43404454)
chr5 (148-212)||(22599955-22600019)
chr5 (124-209)||(26302493-26302574)
chr5 (121-212)||(30403761-30403849)
chr5 (106-212)||(18478014-18478117)
chr5 (178-212)||(18872532-18872566)
chr5 (178-212)||(26169062-26169096)
chr5 (106-208)||(29106019-29106118)
chr5 (106-212)||(29841359-29841462)
chr5 (178-212)||(33729789-33729823)
chr5 (178-212)||(33800904-33800938)
chr5 (119-212)||(2411288-2411378)
chr5 (180-212)||(27440350-27440382)
chr5 (180-212)||(31934927-31934959)
chr5 (121-212)||(6561909-6561997)
chr5 (181-212)||(9577313-9577344)
chr5 (117-212)||(19058996-19059088)
chr5 (181-212)||(22863780-22863811)
chr5 (180-211)||(23648341-23648372)
chr5 (180-211)||(23810200-23810231)
chr5 (117-208)||(32158406-32158494)
chr5 (180-210)||(7645154-7645184)
chr5 (178-212)||(9176836-9176870)
chr5 (178-212)||(10508591-10508625)
chr5 (178-212)||(13754017-13754051)
chr5 (178-212)||(14487572-14487606)
chr5 (182-212)||(20699479-20699509)
chr5 (108-146)||(29629928-29629966)
chr5 (178-212)||(40339149-40339183)
chr5 (117-210)||(2029120-2029210)
chr5 (183-212)||(21017661-21017690)
chr5 (148-212)||(24205447-24205511)
chr5 (181-210)||(27219616-27219645)
chr5 (178-210)||(973026-973058)
chr5 (183-215)||(7234927-7234959)
chr5 (180-212)||(30394580-30394612)
chr5 (184-212)||(34010546-34010574)
[»] chr8 (38 HSPs)
chr8 (117-212)||(8740648-8740740)
chr8 (121-212)||(39484366-39484454)
chr8 (104-212)||(34073218-34073323)
chr8 (117-212)||(26703882-26703974)
chr8 (117-212)||(43468697-43468789)
chr8 (106-207)||(10184782-10184880)
chr8 (148-212)||(13762531-13762596)
chr8 (121-212)||(15042361-15042449)
chr8 (117-212)||(17987441-17987533)
chr8 (106-212)||(4798522-4798625)
chr8 (178-212)||(9524968-9525002)
chr8 (148-201)||(10310304-10310358)
chr8 (178-212)||(23857374-23857408)
chr8 (178-212)||(24608533-24608567)
chr8 (106-212)||(25139868-25139971)
chr8 (178-212)||(28465629-28465663)
chr8 (155-212)||(40249906-40249964)
chr8 (149-210)||(41089170-41089232)
chr8 (178-212)||(43847713-43847747)
chr8 (106-200)||(14683900-14683990)
chr8 (106-193)||(36359699-36359783)
chr8 (178-212)||(1033010-1033044)
chr8 (178-208)||(2376533-2376563)
chr8 (178-212)||(5184937-5184971)
chr8 (178-208)||(7540538-7540568)
chr8 (178-212)||(10199792-10199826)
chr8 (178-212)||(10970277-10970311)
chr8 (178-212)||(17980293-17980327)
chr8 (178-212)||(24074517-24074551)
chr8 (178-208)||(25119223-25119253)
chr8 (178-212)||(27822081-27822115)
chr8 (178-212)||(29514221-29514255)
chr8 (178-212)||(36467934-36467968)
chr8 (178-212)||(42688067-42688101)
chr8 (178-212)||(42761915-42761949)
chr8 (148-212)||(9737379-9737444)
chr8 (183-212)||(29108673-29108702)
chr8 (183-212)||(41225720-41225749)
[»] scaffold1086 (1 HSPs)
scaffold1086 (106-212)||(2499-2602)
[»] chr1 (49 HSPs)
chr1 (106-212)||(4354086-4354189)
chr1 (116-212)||(18923876-18923969)
chr1 (121-212)||(6014514-6014600)
chr1 (117-212)||(15368816-15368908)
chr1 (117-212)||(15774304-15774396)
chr1 (121-212)||(49251391-49251479)
chr1 (148-212)||(9408633-9408698)
chr1 (106-202)||(9527447-9527540)
chr1 (121-212)||(19793537-19793625)
chr1 (117-212)||(24014600-24014692)
chr1 (121-212)||(37733766-37733854)
chr1 (178-212)||(4429532-4429566)
chr1 (148-213)||(15051557-15051623)
chr1 (178-212)||(20357471-20357505)
chr1 (178-212)||(20562450-20562484)
chr1 (178-212)||(23464036-23464070)
chr1 (178-212)||(23930594-23930628)
chr1 (176-210)||(29331212-29331246)
chr1 (117-208)||(32711136-32711223)
chr1 (178-212)||(37490901-37490935)
chr1 (178-212)||(38019998-38020032)
chr1 (178-212)||(43555924-43555958)
chr1 (108-208)||(21884590-21884687)
chr1 (148-202)||(13870100-13870155)
chr1 (178-209)||(17056930-17056961)
chr1 (117-208)||(24661997-24662085)
chr1 (170-212)||(43237784-43237827)
chr1 (117-212)||(48110540-48110632)
chr1 (117-208)||(49916455-49916543)
chr1 (178-212)||(538379-538413)
chr1 (178-208)||(2208688-2208718)
chr1 (178-212)||(5172652-5172686)
chr1 (178-212)||(8261725-8261759)
chr1 (178-212)||(11802070-11802104)
chr1 (178-212)||(16110070-16110104)
chr1 (178-212)||(17871129-17871163)
chr1 (178-212)||(23345105-23345139)
chr1 (106-212)||(24636735-24636838)
chr1 (106-212)||(34560319-34560421)
chr1 (178-212)||(42831958-42831992)
chr1 (148-202)||(47939218-47939272)
chr1 (117-202)||(11405477-11405559)
chr1 (183-212)||(29442022-29442051)
chr1 (106-202)||(30632365-30632458)
chr1 (183-212)||(38851646-38851675)
chr1 (121-210)||(46116170-46116256)
chr1 (148-212)||(49606717-49606782)
chr1 (180-212)||(33059544-33059576)
chr1 (148-203)||(38021272-38021328)
[»] scaffold0334 (1 HSPs)
scaffold0334 (148-208)||(5319-5379)
[»] scaffold1990 (1 HSPs)
scaffold1990 (117-208)||(909-997)
[»] scaffold0533 (1 HSPs)
scaffold0533 (117-212)||(9337-9429)
[»] scaffold0092 (1 HSPs)
scaffold0092 (117-208)||(47309-47397)
[»] scaffold0809 (1 HSPs)
scaffold0809 (148-202)||(4825-4879)
[»] scaffold0191 (1 HSPs)
scaffold0191 (178-212)||(16858-16892)
[»] scaffold0006 (1 HSPs)
scaffold0006 (178-212)||(159025-159059)
[»] scaffold0008 (1 HSPs)
scaffold0008 (179-212)||(43747-43780)
[»] scaffold0062 (1 HSPs)
scaffold0062 (178-212)||(7068-7102)
[»] scaffold0765 (1 HSPs)
scaffold0765 (120-212)||(755-844)
[»] scaffold0178 (2 HSPs)
scaffold0178 (104-212)||(4334-4439)
scaffold0178 (178-210)||(16078-16110)


Alignment Details
Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 42395766 - 42395617
Alignment:
10 aataatatgttgctactacataaattaataaaaaagtttaattacgagatacactgatcctataaatttattttacatatgtannnnnnnnnnattaggt 109  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||           | ||||    
42395766 aataatatattgctactacataaattaataaaaaagtttaattac--gatacactgatcctataaatttattttacatatgtattttttttg--tcaggt 42395671  T
110 agtctgatggctagaattcacattataagatgaataattaagtggggtgtccgg 163  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
42395670 agtctggtggctagaattcactttataaggtgaataattaagtggggtgtccgg 42395617  T

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Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 3465697 - 3465594
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    |||||||||  |||||||||||||| ||||||| |||||||    |||||||||||||  ||| ||||| | ||| ||||||||||||||||||||||||    
3465697 aggtagtctagtggctagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtccta 3465602  T
205 ccaactga 212  Q
    ||||||||    
3465601 ccaactga 3465594  T

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Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 20266977 - 20266877
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    |||||| ||| |||||||||||||| ||||||| ||||||| |    |||||||||||  ||||||||||| ||| ||||||||||||||||||||||||    
20266977 aggtagcctggtggctagaattcaccttataaggtgaataagtg---ggggtgtccggggttcaaactctggcccctgcatataataatgcattgtccta 20266881  T
205 ccaa 208  Q
    ||||    
20266880 ccaa 20266877  T

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Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 24234066 - 24234158
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| |||||||||||||||    |||||||||||||  ||||||| | | ||| ||||||||||||||||||| ||||||||||||    
24234066 tggctagaattcaccttataagatgaataa----gtggggtgtccggggttcaaaccccggcccctgcatataataatgcattgacctaccaactga 24234158  T

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Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 30369421 - 30369359
Alignment:
148 taagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||||||||| ||| || |||| |||||||||||| ||||||||||||||||||||    
30369421 taagtggggtgtccggagttcgaattctggccctgcatataacaatgcattgtcctaccaact 30369359  T

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Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 32885787 - 32885699
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| |||||||    ||||||||||||   ||| ||||| ||||| ||||||||||||||||||||||||||||||||    
32885787 tagaattcaccttataaggtgaataa----gtggggtgtccgaggttcgaactccgacccctgcatataataatgcattgtcctaccaactga 32885699  T

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Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 47017938 - 47018030
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| ||||    ||||||||||||||||  ||| || | | | |||||||||||||||||||||||||||||||||||    
47017938 tggctagaattcaccttataaggtgaa----taagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactga 47018030  T

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Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 53291541 - 53291453
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| |||||||    || |||||||||| ||||||| || ||||| |||||||||||||||||| |||||||||||||    
53291541 tagaattcaccttataaggtgaataa----gttgggtgtccgggattcaaattccgacccatgcatataataatgcattatcctaccaactga 53291453  T

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Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 534744 - 534845
Alignment:
105 taggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcct 203  Q
    ||||||| || |||| |||||||||| ||||||| ||||||| |    ||||||||||| |||||||| | ||||| |||||||||| ||||||||||||    
534744 taggtagcctaatggttagaattcaccttataaggtgaataagtg---ggggtgtccgggattcaaaccccgacccctgcatataatgatgcattgtcct 534840  T
204 accaa 208  Q
    |||||    
534841 accaa 534845  T

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Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 5430356 - 5430449
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||  ||||||| |||||||   ||||||||||||||  ||| ||| |||  |||||||||||||||| ||||||||||||||||||    
5430356 tggctagaattcatcttataaggtgaataa---agtggggtgtccggggttcgaaccctggtccctgcatataataatacattgtcctaccaactga 5430449  T

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Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 10098239 - 10098136
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaa-ctctgaccctgcatataataatgcattgtccta 204  Q
    |||||||||  |||||||||||||  |||||||||||||||    |||||||||||||  ||| || | | | |||||||||||||||||||||||||||    
10098239 aggtagtctagtggctagaattcatcttataagatgaataa----gtggggtgtccggggttcgaatcccggcccctgcatataataatgcattgtccta 10098144  T
205 ccaactga 212  Q
    ||| ||||    
10098143 ccagctga 10098136  T

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Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 39992938 - 39992855
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtccta 204  Q
    |||||||||||||| ||||||| |||||||    ||||||||||| |||||| ||| | | ||||||||||| |||||||||||||||    
39992938 tggctagaattcaccttataaggtgaataa----gtggggtgtccagaattcgaacccagcccctgcatatattaatgcattgtccta 39992855  T

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Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 44074967 - 44074869
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtccta 204  Q
    |||||| || ||||||| ||||||| ||||||| |||||||    ||||||||||||| |||| ||||   | |||||||||||||||||||||||||||    
44074967 aggtagcctaatggctaaaattcaccttataaggtgaataa----gtggggtgtccgggattcgaacttcaatccctgcatataataatgcattgtccta 44074872  T

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Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 45350352 - 45350287
Alignment:
148 taagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||  ||| ||||| |||| ||||||||||||||||| |||||||||||||||    
45350352 taagtggggtgtccggggttcgaactccgacctctgcatataataatgcactgtcctaccaactga 45350287  T

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Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 45359831 - 45359766
Alignment:
148 taagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||  ||| ||||| |||| ||||||||||||||||| |||||||||||||||    
45359831 taagtggggtgtccggggttcgaactccgacctctgcatataataatgcactgtcctaccaactga 45359766  T

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Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 51077943 - 51077878
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||| ||  |||| ||||| ||||| ||||||||||||||||||||||||||||||||    
51077943 taagtggggtgttcgagattcgaactccgacccctgcatataataatgcattgtcctaccaactga 51077878  T

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Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 35451100 - 35451201
Alignment:
104 ttaggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcc 202  Q
    |||||||||||  |||||||||||||  ||||||| |||||||    ||| |||||||| | ||| ||||| ||||| |||||||||||||||||||||     
35451100 ttaggtagtctagtggctagaattcatcttataaggtgaataa----gtgaggtgtccgtagttcgaactccgacccctgcatataataatgcattgtca 35451195  T
203 taccaa 208  Q
    ||||||    
35451196 taccaa 35451201  T

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Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 34773675 - 34773767
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||  |||||||    |||||||||||||  ||| ||| || | ||||||||||||||||||||||||||| |||||||    
34773675 tggctagaattcaccttataaagtgaataa----gtggggtgtccggggttcgaacctcagcccctgcatataataatgcattgtcctatcaactga 34773767  T

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Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 35803089 - 35803173
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaact-ctgaccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||| |||||||||||||||    ||||||||||  || ||| |||| | | |||||||||||||||||||||||||||||||    
35803089 tagaattcaccttataagatgaataa----gtggggtgtcgagagttcgaacttcggtccctgcatataataatgcattgtcctaccaa 35803173  T

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Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 6054025 - 6053991
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
6054025 ccctgcatataataatgcattgtcctaccaactga 6053991  T

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Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 9172421 - 9172455
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
9172421 ccctgcatataataatgcattgtcctaccaactga 9172455  T

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Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 13211337 - 13211436
Alignment:
110 agtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaa 208  Q
    |||||||||| ||||||| || |||| | ||||||||    |||| ||||||||  ||| ||| | ||||| ||||||||||||||||||||||||||||    
13211337 agtctgatggttagaatttaccttatcaaatgaataa----gtggagtgtccggggttcgaaccccgacccatgcatataataatgcattgtcctaccaa 13211432  T

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Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 50657925 - 50657891
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
50657925 ccctgcatataataatgcattgtcctaccaactga 50657891  T

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Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 548937 - 548970
Alignment:
178 ccctgcatataataatgcattgtcctaccaactg 211  Q
    ||||||||||||||||||||||||||||||||||    
548937 ccctgcatataataatgcattgtcctaccaactg 548970  T

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Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 6365369 - 6365336
Alignment:
178 ccctgcatataataatgcattgtcctaccaactg 211  Q
    ||||||||||||||||||||||||||||||||||    
6365369 ccctgcatataataatgcattgtcctaccaactg 6365336  T

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Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 26254028 - 26253963
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||| |||||||| |||| ||||| ||||| ||||||||||||| |||||| |||||||||||    
26254028 taagtggagtgtccgggattcgaactccgacccctgcatataataatacattgttctaccaactga 26253963  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 35031427 - 35031394
Alignment:
179 cctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||||    
35031427 cctgcatataataatgcattgtcctaccaactga 35031394  T

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Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 44374074 - 44374164
Alignment:
120 ctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgac-cctgcatataataatgca-ttgtcctaccaactga 212  Q
    ||||||||||| ||||||||| |||||    ||||||||||||  |||| || ||| || |||||||||||||||||| ||||||||||||||||    
44374074 ctagaattcaccttataagataaataa----gtggggtgtccgagattcgaattctaactcctgcatataataatgcatttgtcctaccaactga 44374164  T

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Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 4722516 - 4722548
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||    
4722516 ctgcatataataatgcattgtcctaccaactga 4722548  T

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Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 9285707 - 9285739
Alignment:
176 gaccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||||    
9285707 gaccctgcatataataatgcattgtcctaccaa 9285739  T

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Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 31601910 - 31601817
Alignment:
116 atggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaa-ctctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||  ||||||| |||||||    |||||||||||||  ||| || ||| | |||||||||||||||| |||||| |||||||||||    
31601910 atggctagaattcatcttataaggtgaataa----gtggggtgtccggggttcgaatctcggcccctgcatataataatacattgttctaccaactga 31601817  T

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Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 35333011 - 35333071
Alignment:
152 tggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactg 211  Q
    |||||||| |||| ||| ||||| | || ||||||||||||||||||||||||||||||||    
35333011 tggggtgttcggagttcgaactccggccactgcatataataatgcattgtcctaccaactg 35333071  T

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Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 43337067 - 43336974
Alignment:
114 tgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaact 210  Q
    |||||| |||||||||| ||||||||||||    |||||||||||| ||| |||| ||| | || |||| |||||||||||||||| ||||| |||||    
43337067 tgatggttagaattcactttataagatgaa----taagtggggtgttcgggattcgaaccccgatccctacatataataatgcattctcctatcaact 43336974  T

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Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 52608552 - 52608651
Alignment:
109 tagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctacca 207  Q
    |||||| |||||||||||||   || |||||||||||| |     ||||||||||  ||| ||||| || || |||||||||||||||||||||||||||    
52608552 tagtctaatggctagaattcgtcttgtaagatgaataagt-----gggtgtccggggttcgaactccgatccatgcatataataatgcattgtcctacca 52608646  T

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Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 3544485 - 3544516
Alignment:
181 tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||    
3544485 tgcatataataatgcattgtcctaccaactga 3544516  T

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Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 12856283 - 12856195
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| |||||||    |||||||||||||  ||| ||||| ||||| | ||||||||| |||||| |||||||||||||    
12856283 tagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaactccgaccccttcatataatagtgcattatcctaccaactga 12856195  T

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Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 21476073 - 21476165
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||||||||    |||||||| |||||||| ||| ||| ||   ||||||||||||||||||| | ||||| |||||||    
21476073 tggctagaattcactttataagatgaa----taagtgggatgtccggagttcgaacatcgacccctgcatataataatgcaatatcctatcaactga 21476165  T

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Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 38433410 - 38433322
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgac-cctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| |||||||    |||||||||| ||  ||| ||||| ||| ||| |||||||||||||||||||||| |||||||    
38433410 tagaattcaccttataaggtgaataa----gtggggtgtctggggttcgaactccgactcctacatataataatgcattgtcctatcaactga 38433322  T

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Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 40200809 - 40200840
Alignment:
181 tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||    
40200809 tgcatataataatgcattgtcctaccaactga 40200840  T

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Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 209
Target Start/End: Complemental strand, 48309190 - 48309159
Alignment:
178 ccctgcatataataatgcattgtcctaccaac 209  Q
    ||||||||||||||||||||||||||||||||    
48309190 ccctgcatataataatgcattgtcctaccaac 48309159  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 3442957 - 3442854
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctg-catataataatgcattgtccta 204  Q
    |||||||||  ||| |||||||||| ||||||| |||||||    |||||||||| ||  ||| ||| | | ||| | ||||||||||||||||||||||    
3442957 aggtagtctactggttagaattcaccttataaggtgaataa----gtggggtgtctggggttcgaaccccggccccgacatataataatgcattgtccta 3442862  T
205 ccaactga 212  Q
    ||||||||    
3442861 ccaactga 3442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 5635234 - 5635200
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||| |||||||    
5635234 ccctgcatataataatgcattgtcctagcaactga 5635200  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 9924901 - 9924867
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||| ||||||||||||||||    
9924901 ccctgcatataataatgcgttgtcctaccaactga 9924867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 10757760 - 10757859
Alignment:
110 agtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaa 208  Q
    ||||| |||||||||||| || ||||||| ||||    ||||||||||||||||  ||| ||||||| || ||  |||||||||||| |||| |||||||    
10757760 agtctaatggctagaatttaccttataaggtgaa----taagtggggtgtccggggttcgaactctggcctctcaatataataatgcgttgttctaccaa 10757855  T

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Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 10970931 - 10971030
Alignment:
110 agtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaa 208  Q
    ||||| |||||||||||| || ||||||| ||||    ||||||||||||||||  ||| ||||||| || ||  |||||||||||| |||| |||||||    
10970931 agtctaatggctagaatttaccttataaggtgaa----taagtggggtgtccggggttcgaactctggcctctcaatataataatgcgttgttctaccaa 10971026  T

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Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 12868078 - 12868108
Alignment:
180 ctgcatataataatgcattgtcctaccaact 210  Q
    |||||||||||||||||||||||||||||||    
12868078 ctgcatataataatgcattgtcctaccaact 12868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 33944413 - 33944447
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||| |||||||||||||    
33944413 ccctgcatataataatgcattatcctaccaactga 33944447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 41003191 - 41003245
Alignment:
148 taagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcc 202  Q
    ||||||||||||||||| ||| |||||   |||||||||||| ||||||||||||    
41003191 taagtggggtgtccggagttcgaactcaacccctgcatataacaatgcattgtcc 41003245  T

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Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 43115313 - 43115279
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||| ||||||||||||||||||    
43115313 ccctgcatataataatacattgtcctaccaactga 43115279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 43606150 - 43606184
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||| |||||||    
43606150 ccctgcatataataatgcattgtcctatcaactga 43606184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 46735019 - 46735053
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||| |||||||||||||||    
46735019 ccctgcatataataatgcagtgtcctaccaactga 46735053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 52560809 - 52560779
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
52560809 ccctgcatataataatgcattgtcctaccaa 52560779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 53698030 - 53698064
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||| |||||||    
53698030 ccctgcatataataatgcattgtcctaacaactga 53698064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 54304921 - 54305012
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    ||||| ||| ||| |||| ||| | | |||| ||||| |||||||||||| |||||||||||    
54304921 tggctagaattcaccttataagctgaataa----gtgggatgttcgggattcgaacccggcccctacatatgataatgcattgttctaccaactga 54305012  T

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Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 55266485 - 55266519
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||| |||||||||||    
55266485 ccctgcatataataatgcattgttctaccaactga 55266519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 56314806 - 56314776
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
56314806 ccctgcatataataatgcattgtcctaccaa 56314776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Original strand, 56546499 - 56546529
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
56546499 ccctgcatataataatgcattgtcctaccaa 56546529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 37032172 - 37032254
Alignment:
118 ggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcct 203  Q
    ||||||||||||| ||||||| ||||    ||||||||||||||||  ||| ||  | || ||||||||||||||||||||||||||    
37032172 ggctagaattcaccttataaggtgaa----taagtggggtgtccggggttcgaatcccgacccctgcatataataatgcattgtcct 37032254  T

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Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 46482868 - 46482901
Alignment:
179 cctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||| |||||||||||||||||    
46482868 cctgcatataataatgtattgtcctaccaactga 46482901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 50783485 - 50783518
Alignment:
179 cctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||| |||||||||||||||    
50783485 cctgcatataataatgcaatgtcctaccaactga 50783518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 8690290 - 8690234
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcct 203  Q
    ||||||||||||||||  ||| ||| | ||||| |||||||||||||||||||||||    
8690290 taagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcct 8690234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 23518326 - 23518274
Alignment:
148 taagtggggtgtccggaattcaaactctgac-cctgcatataataatgcattg 199  Q
    |||||| |||||||||| ||||||||| ||| ||| |||||||||||||||||    
23518326 taagtgaggtgtccggagttcaaactccgactcctacatataataatgcattg 23518274  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 31578060 - 31578032
Alignment:
182 gcatataataatgcattgtcctaccaact 210  Q
    |||||||||||||||||||||||||||||    
31578060 gcatataataatgcattgtcctaccaact 31578032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 35909215 - 35909247
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||| |||||||||||||||||    
35909215 ctgcatataataatgtattgtcctaccaactga 35909247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 36576340 - 36576272
Alignment:
148 taagtggggtgtccggaattcaaact-ctgaccctgcatataataatgcattgtcctaccaactgacac 215  Q
    ||||||||||||||||  ||| |||  | ||||||| ||||||||||||||||||| ||| ||||||||    
36576340 taagtggggtgtccggggttcgaaccgcggaccctgtatataataatgcattgtccaaccgactgacac 36576272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 42558908 - 42558940
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||| |||||||    
42558908 ctgcatataataatgcattgtcctatcaactga 42558940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 49089327 - 49089359
Alignment:
178 ccctgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||||||||| |||||||||||||||    
49089327 ccctgcatataataatgtattgtcctaccaact 49089359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 52743270 - 52743242
Alignment:
181 tgcatataataatgcattgtcctaccaac 209  Q
    |||||||||||||||||||||||||||||    
52743270 tgcatataataatgcattgtcctaccaac 52743242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 212
Target Start/End: Original strand, 22389743 - 22389834
Alignment:
118 ggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||| ||||||| |||||||    ||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||    
22389743 ggctagaattcaccttataaggtgaataa----gtggggtgtccgggattcgaaccctgacccctgcatataataatgcattgtcctaccaactga 22389834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 35190879 - 35190774
Alignment:
104 ttaggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcc 202  Q
    |||||||||||  |||||||||||||| ||||||| |||||||    ||||||||| |||  ||| ||||| ||||| |||||||||||||||||||| |    
35190879 ttaggtagtctagtggctagaattcaccttataaggtgaataa----gtggggtgttcggggttcgaactccgacccctgcatataataatgcattgttc 35190784  T
203 taccaactga 212  Q
    ||||||||||    
35190783 taccaactga 35190774  T

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Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 12089200 - 12089108
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||||||  ||| ||||| | ||| ||||||||||||||||||||||||||||||||    
12089200 tggctagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaactga 12089108  T

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Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 21507220 - 21507283
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||    
21507220 taagtggggtgtccggagttcaaactccgacccctgcatataataatacattgtcctaccaact 21507283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 12127890 - 12127993
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    |||||||||  |||||||||||||| ||||||| |||||||    |||| ||||||||  ||| || || ||||| ||||||||||||||||||||||||    
12127890 aggtagtctagtggctagaattcaccttataaggtgaataa----gtggcgtgtccggggttcgaattccgacccctgcatataataatgcattgtccta 12127985  T
205 ccaactga 212  Q
    ||||||||    
12127986 ccaactga 12127993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 30566172 - 30566069
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtccta 204  Q
    |||||||||  ||||| |||||||| ||||||| |||||||    |||||||||||||  ||||||||   ||| |||||||||||||||||||||||||    
30566172 aggtagtctagtggctggaattcaccttataaggtgaataa----gtggggtgtccggggttcaaacttcaacctctgcatataataatgcattgtccta 30566077  T
205 ccaactga 212  Q
    ||||||||    
30566076 ccaactga 30566069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 8233189 - 8233097
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||| ||||||| |||    ||||| |||| ||| ||| |||||| ||| ||||||||||| |||||||||||||||||    
8233189 tggctagaattcacattataaggtgaataagtaa----ggtgttcggagttcgaaccctgacctctgtatataataatgtattgtcctaccaactga 8233097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 34396197 - 34396094
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    |||||||||  ||| |||||||||| ||||||| ||||||| ||    ||||||||||| ||| ||||| | ||| ||||||||||||||||||||| ||    
34396197 aggtagtctattggttagaattcaccttataaggtgaataaata----gggtgtccggagttcgaactccggcccctgcatataataatgcattgtcgta 34396102  T
205 ccaactga 212  Q
    ||||||||    
34396101 ccaactga 34396094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 5288339 - 5288429
Alignment:
119 gctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||| ||||||| ||||||||| ||    ||||||||| |||  || | ||||| ||||||||||||||||||||||||||||||||    
5288339 gctagaattcaccttataaggtgaataattgag----gtgtccggagttcggaccccgacccctgcatataataatgcattgtcctaccaactga 5288429  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 6652312 - 6652223
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaact 210  Q
    |||||| ||||||| ||||||| ||||||| |    |||||||| ||| ||| ||| || |||||||||| |||||||||||||||||||||||    
6652312 tggctataattcactttataaggtgaataaat----ggggtgtctggagttcgaaccctaaccctgcataaaataatgcattgtcctaccaact 6652223  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 7563555 - 7563660
Alignment:
104 ttaggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcc 202  Q
    ||||||||| |  |||||| ||||||| ||||||| |||||||    |||||||||||||  ||  ||| ||||||| ||||| ||||||||||||||||    
7563555 ttaggtagtttagtggctaaaattcaccttataaggtgaataa----gtggggtgtccggggtttgaaccctgacccctgcatgtaataatgcattgtcc 7563650  T
203 taccaactga 212  Q
    ||||||||||    
7563651 taccaactga 7563660  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 18244004 - 18244096
Alignment:
116 atggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||| ||||||||||||||| ||    |||| |||||  ||| ||| | |||| |||||||||||||||||||||||||||||||||    
18244004 atggctagaattcaccttataagatgaataagta----gggtatccggg-ttcgaaccccgacctctgcatataataatgcattgtcctaccaactga 18244096  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 15288947 - 15289039
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactct-gaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| |||||||||||||||    |||||||||| ||| ||| ||| |  | |||| |||||||||||||| |||||||||||||||    
15288947 tggctagaattcaccttataagatgaataa----gtggggtgtctggagttcgaaccccagcccctacatataataatgcaatgtcctaccaactga 15289039  T

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Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 18904675 - 18904767
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    ||||||||||| || ||| ||| | | ||| | ||||||||||||||||||||||||||||||    
18904675 tggctagaattcaccttataaggtgaataa----gtggggtgtccagagttcgaaccccggcccatacatataataatgcattgtcctaccaactga 18904767  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 9438347 - 9438313
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
9438347 ccctgcatataataatgcattgtcctaccaactga 9438313  T

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Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 22501063 - 22501029
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
22501063 ccctgcatataataatgcattgtcctaccaactga 22501029  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 16801865 - 16801800
Alignment:
148 taagtggggtgtccggaattcaaactctgac-cctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||| ||||||||||||| ||| | ||| ||||||||||||||||  ||||||||||||||||    
16801865 taagtggtgtgtccggaattcgaaccccgactcctgcatataataatgttttgtcctaccaactga 16801800  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 10377176 - 10377208
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||    
10377176 ctgcatataataatgcattgtcctaccaactga 10377208  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 11982862 - 11982773
Alignment:
119 gctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||| ||||||||| || ||    |||||||||||||  ||||||| |   ||||||||||||||||||||| | |||||||||||    
11982862 gctagaattcaccttataagataaacaa----gtggggtgtccggggttcaaacccgacccctgcatataataatgcattattctaccaactga 11982773  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 19165394 - 19165362
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||    
19165394 ctgcatataataatgcattgtcctaccaactga 19165362  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 15126346 - 15126254
Alignment:
116 atggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| |||||||||| ||||||| ||||||| |    |||||||||||| ||| ||| |   |||| |||||||||||| |||||||||||||||||    
15126346 atggttagaattcaccttataaggtgaataaat----ggggtgtccggagttcgaacccctcccctacatataataatgtattgtcctaccaactga 15126254  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 19642600 - 19642631
Alignment:
181 tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||    
19642600 tgcatataataatgcattgtcctaccaactga 19642631  T

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Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 20716376 - 20716476
Alignment:
109 tagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctacca 207  Q
    |||||| |||| |||||||||  |||||||||||||||    ||||||| || ||| ||| ||  | ||||| | |||||||||||||||||||||||||    
20716376 tagtctaatggttagaattcatcttataagatgaataa----gtggggtatctggagttcgaatcccgacccctacatataataatgcattgtcctacca 20716471  T
208 actga 212  Q
    |||||    
20716472 actga 20716476  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 24623564 - 24623533
Alignment:
181 tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||    
24623564 tgcatataataatgcattgtcctaccaactga 24623533  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 25020520 - 25020612
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactc-tgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| ||||    ||||||||||||||||  ||| ||| |  | |||||||||||||||||||| ||||||||| ||||    
25020520 tggctagaattcaccttataaggtgaa----taagtggggtgtccggggttcgaacccaggcccctgcatataataatgcatcgtcctaccagctga 25020612  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 6025436 - 6025470
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||| |||||||||||||    
6025436 ccctgcatataataatgcattatcctaccaactga 6025470  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 9491785 - 9491819
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
9491785 ccctacatataataatgcattgtcctaccaactga 9491819  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 16251518 - 16251605
Alignment:
120 ctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||| ||||||| |||||||    |||||||||||||| ||| |||   ||||| ||||||||||  ||||||||||||||||||    
16251518 ctagaattcaccttataaggtgaataa----gtggggtgtccggagttcgaacaacgacccctgcatataattgtgcattgtcctaccaact 16251605  T

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Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 23771078 - 23771048
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
23771078 ccctgcatataataatgcattgtcctaccaa 23771048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 26878845 - 26878811
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||| ||||||||||    
26878845 ccctgcatataataatgcattgtcttaccaactga 26878811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 31741513 - 31741547
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
31741513 ccctacatataataatgcattgtcctaccaactga 31741547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 34365780 - 34365746
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||| |||||||||||||||||||||||||||    
34365780 ccctgcacataataatgcattgtcctaccaactga 34365746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 11636738 - 11636685
Alignment:
149 aagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtc 201  Q
    |||||||||||||||  ||| ||||| ||||| |||||||||||||||||||||    
11636738 aagtggggtgtccggggttcgaactccgacccctgcatataataatgcattgtc 11636685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 12101931 - 12101898
Alignment:
178 ccctgcatataataatgcattgtcctaccaactg 211  Q
    ||||||||||||||||| ||||||||||||||||    
12101931 ccctgcatataataatgtattgtcctaccaactg 12101898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 19417922 - 19417836
Alignment:
120 ctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaac 209  Q
    ||||||||||| |||||||||||||||    |||||||||| || |||| ||  | || |||||||||||||||| |||| ||||||||||    
19417922 ctagaattcaccttataagatgaataa----gtggggtgtctgggattcgaatcccgatccctgcatataataatacattatcctaccaac 19417836  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 10373640 - 10373608
Alignment:
178 ccctgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||||||||||||||| |||||||||    
10373640 ccctgcatataataatgcattgttctaccaact 10373608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 10424527 - 10424608
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtc 201  Q
    ||||||||||| || ||||||| |||||||    ||||||||||||| ||||||||   || |||| |||||||||||||||||||    
10424527 tggctagaatttactttataaggtgaataa----gtggggtgtccgggattcaaaccacgacccctacatataataatgcattgtc 10424608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 26528612 - 26528580
Alignment:
178 ccctgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||||||||||||||| |||||||||    
26528612 ccctgcatataataatgcattgttctaccaact 26528580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 32057077 - 32057045
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||| |||||||    
32057077 ctgcatataataatgcattgtcctatcaactga 32057045  T

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Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 38792315 - 38792223
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| ||||||| ||    ||||||||||  ||||||||||||||| ||||||||||||||||||||| ||||||||||    
38792315 tggctagaattcaccttataaggtgaataagta----gggtgtccggggttcaaactctgacccctgcatataataatgcattgtcttaccaactga 38792223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 2366471 - 2366368
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    |||||| || ||||||||||||||| ||||||| |||||||    ||||||||||  || ||| ||| | ||||| ||||||||||||||||||||||||    
2366471 aggtagcctaatggctagaattcaccttataaggtgaataa----gtggggtgtctagagttcgaaccccgacccctgcatataataatgcattgtccta 2366376  T
205 ccaactga 212  Q
     |||||||    
2366375 tcaactga 2366368  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 21086218 - 21086115
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtccta 204  Q
    ||||| ||| ||||||| ||||||  ||||||| |||||||    || ||||||||||| ||| ||||  || |||||||||||||||||||||||||||    
21086218 aggtaatctaatggctaaaattcatcttataaggtgaataa----gttgggtgtccggagttcgaacttcgatccctgcatataataatgcattgtccta 21086123  T
205 ccaactga 212  Q
    ||||||||    
21086122 ccaactga 21086115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 47552327 - 47552224
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccct-gcatataataatgcattgtccta 204  Q
    |||||| ||| |||||||||||||| ||||||| ||||||| ||    ||||||||||  ||| ||| | | |||| |||||||||||||||||||||||    
47552327 aggtagcctggtggctagaattcaccttataaggtgaataagta----gggtgtccggggttcgaaccccggcccttgcatataataatgcattgtccta 47552232  T
205 ccaactga 212  Q
    ||||||||    
47552231 ccaactga 47552224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 14967614 - 14967718
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    |||||||||  |||||||||||||| ||||||| |||||||   |||| |||||| |   ||||||| | ||||| | ||||||||||||||||||||||    
14967614 aggtagtctagtggctagaattcaccttataagttgaataa---agtgaggtgtctgaggttcaaaccccgacccctacatataataatgcattgtccta 14967710  T
205 ccaactga 212  Q
    ||||||||    
14967711 ccaactga 14967718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 15397090 - 15397194
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    |||||||||  |||||||||||||| ||||||| |||||||   |||| |||||| |   ||||||| | ||||| | ||||||||||||||||||||||    
15397090 aggtagtctagtggctagaattcaccttataagttgaataa---agtgaggtgtctgaggttcaaaccccgacccctacatataataatgcattgtccta 15397186  T
205 ccaactga 212  Q
    ||||||||    
15397187 ccaactga 15397194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 7262989 - 7263082
Alignment:
116 atggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||| ||||||||||||||| ||    |||||| |||  ||| |||||  ||| || ||||||||||||||||||||||||||||||    
7262989 atggctagaattcaccttataagatgaataaata----gggtgttcggggttcgaactccaacctctacatataataatgcattgtcctaccaactga 7263082  T

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Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 22741317 - 22741217
Alignment:
108 gtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactc--tgacc-ctgcatataataatgcattgtccta 204  Q
    |||||||  |||||||||||||| |||||||||||||||    ||||||||||||  |||| ||| |  ||||  |||||||||||||||||||||||||    
22741317 gtagtctagtggctagaattcaccttataagatgaataa----gtggggtgtccgagattcgaaccccctgactactgcatataataatgcattgtccta 22741222  T
205 ccaac 209  Q
    |||||    
22741221 ccaac 22741217  T

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Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 4590655 - 4590690
Alignment:
177 accctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||||||    
4590655 accctgcatataataatgcattgtcctaccaactga 4590690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 27907888 - 27907980
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||| ||||||| |||||||||||||||    ||||||||||||  ||||  || | | ||| ||||||||||||||||||||||||||||||||    
27907888 tggctaaaattcaccttataagatgaataa----gtggggtgtccgagattcttaccccggcccctgcatataataatgcattgtcctaccaactga 27907980  T

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Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 30644272 - 30644180
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||| ||  ||| ||| | | ||| ||||||||||||||||||||||||||||||||    
30644272 tggctagaattcaccttataaggtgaataa----gtggggtgtctggggttcgaacaccggcccctgcatataataatgcattgtcctaccaactga 30644180  T

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Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 34948209 - 34948117
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||||||  ||| ||| || | | |||||||| ||||||||||||||||||||||||    
34948209 tggctagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaacctcggccactgcatatgataatgcattgtcctaccaactga 34948117  T

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Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 22047565 - 22047531
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
22047565 ccctgcatataataatgcattgtcctaccaactga 22047531  T

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Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 27047765 - 27047799
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
27047765 ccctgcatataataatgcattgtcctaccaactga 27047799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 38778729 - 38778763
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
38778729 ccctgcatataataatgcattgtcctaccaactga 38778763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 45011649 - 45011740
Alignment:
116 atggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||||||| ||||||| |||||||    ||||||| ||||   ||| ||| ||| || |||||||||||||||||||||||||||||||    
45011649 atggctagaattcaccttataaggtgaataa----gtggggtctccgaggttcgaaccctggcctctgcatataataatgcattgtcctaccaact 45011740  T

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Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 45198079 - 45198182
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtccta 204  Q
    ||||||||| ||||||||||||||| ||||||| ||||    ||| ||||||||||||  ||| || |||   | ||||||||||||||||||| |||||    
45198079 aggtagtctaatggctagaattcaccttataaggtgaa----taaatggggtgtccggggttcgaatctcaatcactgcatataataatgcattatccta 45198174  T
205 ccaactga 212  Q
    ||||||||    
45198175 ccaactga 45198182  T

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Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 46337918 - 46337952
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
46337918 ccctgcatataataatgcattgtcctaccaactga 46337952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 22706047 - 22706112
Alignment:
148 taagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||| ||  ||| || | |||||||||||||||| ||||||||||||||||||    
22706047 taagtggggtgtccggagtttgaacctcagcccctgcatataataatacattgtcctaccaactga 22706112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 23430857 - 23430906
Alignment:
148 taagtggggtgtccggaattcaaactctgaccctgcatataataatgcat 197  Q
    |||||| |||||||| | ||||||||| ||||||||||||||||||||||    
23430857 taagtgaggtgtccgaagttcaaactccgaccctgcatataataatgcat 23430906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 32814903 - 32814838
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||| |||| ||||| ||||| |||||||||||||||||   ||||||||||||    
32814903 taagtggggtgtccgggattcgaactccgacccctgcatataataatgcatgtccctaccaactga 32814838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 42887267 - 42887165
Alignment:
107 ggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtcctac 205  Q
    ||||||||  |||||||||||||| |||||||     ||| ||||||||||||||||  ||| || ||| | ||||||||||||||||| |||||| |||    
42887267 ggtagtctagtggctagaattcaccttataag----gtaaataagtggggtgtccggggttcgaacctcagcccctgcatataataatgaattgtcgtac 42887172  T
206 caactga 212  Q
    |||||||    
42887171 caactga 42887165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 49012474 - 49012409
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    ||||| ||||||| ||||||  ||| ||||||| | ||||||||||||||||||||||||||||||    
49012474 taagtagggtgtctggaatttgaaccctgaccccttcatataataatgcattgtcctaccaactga 49012409  T

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Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 2261479 - 2261564
Alignment:
120 ctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaa 208  Q
    ||||||||||| ||||||| |||||||    || |||||||||| |||| ||| | | ||| ||||||||||||||||||||||||||||    
2261479 ctagaattcaccttataaggtgaataa----gttgggtgtccgggattcgaaccccggcccctgcatataataatgcattgtcctaccaa 2261564  T

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Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 17900929 - 17900961
Alignment:
178 ccctgcatataataatgcattgtcctaccaact 210  Q
    |||||||||||||||||||||||||||||||||    
17900929 ccctgcatataataatgcattgtcctaccaact 17900961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 22965941 - 22966038
Alignment:
108 gtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctacc 206  Q
    |||||||  ||| |||||||||| ||||||| |||||||    |||||||||| ||  ||| ||| || | |||||||||||||||||||||||||||||    
22965941 gtagtctagtggttagaattcaccttataaggtgaataa----gtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctacc 22966036  T

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Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 34962024 - 34962056
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||    
34962024 ctgcatataataatgcattgtcctaccaactga 34962056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 46716376 - 46716344
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||    
46716376 ctgcatataataatgcattgtcctaccaactga 46716344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 29710093 - 29710184
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| |||||||||||||||    |||| |||||  || ||| ||| || | |||| ||||||||||||||||||||||||||||||    
29710093 tggctagaattcaccttataagatgaataa----gtggagtgtctagagttcgaac-ctcagccctacatataataatgcattgtcctaccaactga 29710184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Complemental strand, 4818061 - 4818031
Alignment:
182 gcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||    
4818061 gcatataataatgcattgtcctaccaactga 4818031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 5787506 - 5787476
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
5787506 ccctgcatataataatgcattgtcctaccaa 5787476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 8195960 - 8195926
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||| |||||||||||||||||||||||||||||    
8195960 ccctggatataataatgcattgtcctaccaactga 8195926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 23685604 - 23685638
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||| |||||||    
23685604 ccctgcatataataatgcattgtcctatcaactga 23685638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 24396990 - 24396956
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||| ||||||||    
24396990 ccctgcatataataatgcattgtcctgccaactga 24396956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 25818331 - 25818297
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||| |||||||||||||    
25818331 ccctgcatataataatgcattatcctaccaactga 25818297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 31279356 - 31279390
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
31279356 ccctacatataataatgcattgtcctaccaactga 31279390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 36176916 - 36176882
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
36176916 ccctacatataataatgcattgtcctaccaactga 36176882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 36316024 - 36316058
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||| |||||||||||||    
36316024 ccctgcatataataatgcattatcctaccaactga 36316058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 44437875 - 44437909
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||| ||||||    
44437875 ccctgcatataataatgcattgtcctactaactga 44437909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 8725188 - 8725221
Alignment:
179 cctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||| ||||||||||||||    
8725188 cctgcatataataatgcatcgtcctaccaactga 8725221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 31694146 - 31694082
Alignment:
148 taagtggggtgtccggaattcaaa-ctctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||| ||| || |||   ||||||||||||||||||||||||| |||||||||    
31694146 taagtggggtgtccggagttcgaatctcgtcccctgcatataataatgcattgtcc-accaactga 31694082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 4042263 - 4042348
Alignment:
120 ctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaa 208  Q
    ||||||||||| |||||| ||||||||    || ||||||||| | ||| ||||| ||||| |||||||||||||||||| ||| |||||    
4042263 ctagaattcaccttataaaatgaataa----gttgggtgtccgaagttcgaactccgacccctgcatataataatgcattatcccaccaa 4042348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Complemental strand, 30152780 - 30152752
Alignment:
184 atataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||    
30152780 atataataatgcattgtcctaccaactga 30152752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 38451977 - 38451884
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcc 202  Q
    |||||||||  |||||||||||||| ||||||  |||||||    ||||||||||||| |||| ||| | | ||| ||||||||| ||||||||||||    
38451977 aggtagtctagtggctagaattcaccttataatgtgaataa----gtggggtgtccgggattcgaaccccggcccctgcatataacaatgcattgtcc 38451884  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 43970905 - 43970937
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||| |||||||||||    
43970905 ctgcatataataatgcattgttctaccaactga 43970937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 36727455 - 36727546
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| |||||||||||||||    ||||||||||||   ||| ||| | |||| ||||||||||||||||||||||||||||||||    
36727455 tggctagaattcaccttataagatgaataa----gtggggtgtccgaggttcgaaccccgaccttgcatataataatgcattgtcctaccaactga 36727546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 35483385 - 35483280
Alignment:
104 ttaggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcc 202  Q
    |||||||||||  ||||||||||| || ||||||| |||||||    ||||||||||||| |||| ||| | ||||| ||||||||||||||||||||||    
35483385 ttaggtagtctagtggctagaatttaccttataaggtgaataa----gtggggtgtccgggattcgaaccccgacccctgcatataataatgcattgtcc 35483290  T
203 taccaactga 212  Q
    ||| ||||||    
35483289 tactaactga 35483280  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 23820732 - 23820640
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| |||||||||||||||    |||||||||| ||  ||| ||||| | ||| ||||||||||||||||||||||||||||||||    
23820732 tggctagaattcaccttataagatgaataa----gtggggtgtctggggttcgaactccggcccctgcatataataatgcattgtcctaccaactga 23820640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 13616066 - 13616155
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaac 209  Q
    |||||||||||||| |||||||||||||||    ||||||||||||   ||| ||||| ||||| | |||||||||||||||||||||||||||    
13616066 tggctagaattcaccttataagatgaataa----gtggggtgtccgaggttcgaactccgacccctacatataataatgcattgtcctaccaac 13616155  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 14417971 - 14417883
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactct-gaccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||| ||||||| |||||||    |||||||||||||  ||| |||||  | |||||||||||||||||||||||||||||||    
14417971 tggctagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaactccagcccctgcatataataatgcattgtcctaccaa 14417883  T

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Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 20623769 - 20623861
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    ||||||||||| || ||| ||| |||| |||| ||||||||||||||||||||||| ||||||    
20623769 tggctagaattcaccttataaggtgaataa----gtggggtgtcctgagttcgaaccctgatccctacatataataatgcattgtcctacaaactga 20623861  T

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Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 33206860 - 33206768
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactct-gaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||||||  ||| ||| |  | |||||||||||||||||||||||||||||||||||    
33206860 tggctagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaaccccagcccctgcatataataatgcattgtcctaccaactga 33206768  T

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Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 49146187 - 49146095
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||  |||||||    |||||||||||||  ||| ||| | ||||| ||||||||||||||||||||||||||||||||    
49146187 tggctagaattcaccttataaagtgaataa----gtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactga 49146095  T

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Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 13539945 - 13540048
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    ||||||||| ||||||||||||||| ||||||| | |||||    |||||||||||||  ||| ||| |  |||| | ||||||||||||||||||||||    
13539945 aggtagtctaatggctagaattcaccttataaggtaaataa----gtggggtgtccggggttcgaaccccaacccctacatataataatgcattgtccta 13540040  T
205 ccaactga 212  Q
    ||||||||    
13540041 ccaactga 13540048  T

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Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 45713579 - 45713493
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaact 210  Q
    |||||||||| ||||||| |||||||    |||||||||||||| ||| ||||| | ||| | ||||||||||||||||||||||||||||    
45713579 tagaattcaccttataaggtgaataa----gtggggtgtccggagttcgaactccggcccctacatataataatgcattgtcctaccaact 45713493  T

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Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 2565025 - 2564932
Alignment:
116 atggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaact-ctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||| ||||||    | ||| |||||||||||||| ||||||||||  | | ||||||||||||||||||| ||| |||||||||||    
2565025 atggctagaattcactttataa----agtaaataagtggggtgtccagaattcaaaccacggcccctgcatataataatgcactgttctaccaactga 2564932  T

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Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 47062090 - 47062150
Alignment:
152 tggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||  ||| ||||| |||||  ||||||||||||||||||||||||||||||    
47062090 tggggtgtccggggttcgaactccgacccatcatataataatgcattgtcctaccaactga 47062150  T

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Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 53468024 - 53467960
Alignment:
148 taagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||   ||| ||| | | |||||||||||||||||||||||||||||||||||    
53468024 taagtggggtgtccgaggttcgaaccccgcccctgcatataataatgcattgtcctaccaactga 53467960  T

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Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 34344770 - 34344861
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgac-cctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||||||  || |||||| | | |||||||||||||||||||||||||| |||||||    
34344770 tggctagaattcaccttataaggtgaataa----gtggggtgtccggggtt-aaactccggcacctgcatataataatgcattgtcctatcaactga 34344861  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 43566788 - 43566880
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||| |   ||| ||| | ||||| ||||||||||||||||||||||||||||||||    
43566788 tggctagaattcaccttataaggtgaataa----gtggggtgtctgaggttcgaaccccgacccctgcatataataatgcattgtcctaccaactga 43566880  T

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Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 20244179 - 20244145
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
20244179 ccctgcatataataatgcattgtcctaccaactga 20244145  T

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Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 32876166 - 32876200
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
32876166 ccctgcatataataatgcattgtcctaccaactga 32876200  T

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Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 35849329 - 35849363
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
35849329 ccctgcatataataatgcattgtcctaccaactga 35849363  T

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Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 21420208 - 21420273
Alignment:
148 taagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| | |||| |||   |||| |||||||||||||||||||||||||||||||||    
21420208 taagtggggtgtccaggattcgaacctcgaccgctgcatataataatgcattgtcctaccaactga 21420273  T

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Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 29507261 - 29507228
Alignment:
179 cctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||||    
29507261 cctgcatataataatgcattgtcctaccaactga 29507228  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 34503259 - 34503226
Alignment:
179 cctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||||    
34503259 cctgcatataataatgcattgtcctaccaactga 34503226  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 42271007 - 42271097
Alignment:
119 gctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||| ||||||| ||||||| ||    ||||||||||| ||| ||| | | ||| ||||||||| ||||||||||||||||||||||    
42271007 gctagaattcaccttataaggtgaataagta----gggtgtccggagttcgaaccccggcccctgcatataacaatgcattgtcctaccaactga 42271097  T

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Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 41121914 - 41121882
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||    
41121914 ctgcatataataatgcattgtcctaccaactga 41121882  T

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Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 17269311 - 17269402
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||| ||| |||||||    ||| |||||| ||||||| ||| |||| |||| |||||||||||||| |||||||||||||||    
17269311 tggctagaattcaccttagaaggtgaataa----gtgaggtgtc-ggaattcgaaccctgatccctacatataataatgcaatgtcctaccaactga 17269402  T

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Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 17440015 - 17440046
Alignment:
178 ccctgcatataataatgcattgtcctaccaac 209  Q
    ||||||||||||||||||||||||||||||||    
17440015 ccctgcatataataatgcattgtcctaccaac 17440046  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 19117532 - 19117469
Alignment:
149 aagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||    |||| ||| | ||||||||||||||||| |||||||||||||||||    
19117532 aagtggggtgtccgcggatcaacctcagtccctgcatataataatgtattgtcctaccaactga 19117469  T

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Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 32508786 - 32508878
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    ||||||||| |||  ||| ||| | ||||| |||||||||||||||||| ||||| |||||||    
32508786 tggctagaattcaccttataaggtgaataa----gtggggtgttcggggttcgaaccccgacccctgcatataataatgcattatcctatcaactga 32508878  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 40786322 - 40786291
Alignment:
181 tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||    
40786322 tgcatataataatgcattgtcctaccaactga 40786291  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 48173389 - 48173297
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    ||| |||||||||  ||| |||||  |||| | ||||||||||||||||||| ||||||||||    
48173389 tggctagaattcaccttataaggtgaataa----gtgaggtgtccggggttcgaactccaacccatacatataataatgcattgtcttaccaactga 48173297  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 16278001 - 16278035
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||| ||||||||||||||    
16278001 ccctgcatataataatgcatggtcctaccaactga 16278035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 24751310 - 24751344
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||| ||||||    
24751310 ccctgcatataataatgcattgtcctactaactga 24751344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 33072335 - 33072301
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||| |||||||    
33072335 ccctgcatataataatgcattgtcctatcaactga 33072301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 35477847 - 35477752
Alignment:
104 ttaggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgac-cctgcatataataatgcattgtcc 202  Q
    |||||||| || ||| ||||||||||| ||||||| ||||    ||||||||||||||||| ||| ||||| ||| |||  ||||||||||||| |||||    
35477847 ttaggtagcctaatgactagaattcaccttataaggtgaa----taagtggggtgtccggagttcgaactccgacacctaaatataataatgcaatgtcc 35477752  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 49639073 - 49639039
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
49639073 ccctacatataataatgcattgtcctaccaactga 49639039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 4072752 - 4072817
Alignment:
148 taagtggggtgtccggaattcaaactctgac-cctgcatataataatgcattgtcctaccaactga 212  Q
    |||| |||||||||| | ||| ||||| ||| ||||||||||||||| ||||||||| ||||||||    
4072752 taagaggggtgtccgaagttcgaactccgactcctgcatataataatacattgtcctcccaactga 4072817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 8475491 - 8475426
Alignment:
148 taagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||| || |||| || |||||||| | |||| |||||||| ||||||||||||||||||||||||    
8475491 taagttggatgtctgggattcaaaccccgacctctgcatatcataatgcattgtcctaccaactga 8475426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 14271911 - 14271948
Alignment:
109 tagtctgatggctagaattcacattataagatgaataa 146  Q
    |||||| ||||||||||||||| |||||||||||||||    
14271911 tagtctaatggctagaattcaccttataagatgaataa 14271948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 19540385 - 19540352
Alignment:
179 cctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||| |||||||||||||||||    
19540385 cctgcatataataatgtattgtcctaccaactga 19540352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 32665357 - 32665292
Alignment:
148 taagtggggtgtccggaattcaaactctgaccct-gcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||| ||  ||| | |||||| ||||||||||||||||| |||||| ||||||    
32665357 taagtggggtgtccggagtttgaaccccgacccttgcatataataatgcattatcctactaactga 32665292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 209
Target Start/End: Complemental strand, 47427768 - 47427739
Alignment:
180 ctgcatataataatgcattgtcctaccaac 209  Q
    ||||||||||||||||||||||||||||||    
47427768 ctgcatataataatgcattgtcctaccaac 47427739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Complemental strand, 50720462 - 50720433
Alignment:
183 catataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||    
50720462 catataataatgcattgtcctaccaactga 50720433  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 50792386 - 50792415
Alignment:
183 catataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||    
50792386 catataataatgcattgtcctaccaactga 50792415  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 8175874 - 8175834
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataa 146  Q
    |||||||||| |||||||||||||| ||||||| |||||||    
8175874 aggtagtctggtggctagaattcaccttataaggtgaataa 8175834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 36331707 - 36331800
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcc 202  Q
    |||||||||  |||||||||||||| || |||  ||||    ||||||||||||||||  ||| ||| | || |||||||||||||||||||||||||    
36331707 aggtagtctagtggctagaattcactttttaaagtgaa----taagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcc 36331800  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 48659840 - 48659899
Alignment:
148 taagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaa 208  Q
    ||||||||||||||||||||| ||| ||| | || |||||||||||||||  |||||||||    
48659840 taagtggggtgtccggaattcgaac-ctgtctctacatataataatgcatgttcctaccaa 48659899  T

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Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 33001547 - 33001637
Alignment:
119 gctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccct-gcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||| |||||||||||||||    ||||||||||||| |||||||| | | |||| ||||||||||| |||||||||||||||||||    
33001547 gctagaattcaccttataagatgaataa----gtggggtgtccgggattcaaaccccggcccttgcatataataacgcattgtcctaccaactga 33001637  T

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Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 9791886 - 9791979
Alignment:
116 atggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgac-cctgcatataataatgcattgtcctaccaactga 212  Q
    |||| |||||||||  |||||||||||||||    ||||||||||| |||||| ||| | ||| ||| ||||||||||||||||||||||||||||||    
9791886 atggttagaattcatcttataagatgaataa----gtggggtgtccagaattcgaaccccgacacctacatataataatgcattgtcctaccaactga 9791979  T

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Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 9802996 - 9802913
Alignment:
119 gctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccct-gcatataataatgcattgtcc 202  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||  ||| ||| | |||||| |||||||||||||||||||||    
9802996 gctaaaattcaccttataagatgaataat-aagtggggtgtccggggttcgaaccccgacccttgcatataataatgcattgtcc 9802913  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 35502092 - 35502156
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactg 211  Q
    ||||||||||||||||| ||||||||| ||||| |  ||||||||||||||||||||||||||||    
35502092 taagtggggtgtccggagttcaaactccgacccctatatataataatgcattgtcctaccaactg 35502156  T

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Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 16028092 - 16028192
Alignment:
109 tagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctacca 207  Q
    ||||||| |||||||||||||| ||||||  |||||||    ||||| |||| ||| ||| ||| | |||| ||||||||||||||||||||||||||||    
16028092 tagtctggtggctagaattcaccttataaagtgaataa----gtgggatgtctggagttcgaaccccgaccactgcatataataatgcattgtcctacca 16028187  T
208 actga 212  Q
    |||||    
16028188 actga 16028192  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 22297444 - 22297536
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactc-tgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||| |||||||||| ||||||| |    |||||||||||  ||| ||| | || |||||||||||||||||||||||||||||||||||    
22297444 tggctagaattaacattataaggtgaataaat----ggggtgtccggggttcgaacccctgcccctgcatataataatgcattgtcctaccaactga 22297536  T

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Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 30474187 - 30474279
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||| ||  ||| ||| || | |||||||||||||||||||||||||||||||||||    
30474187 tggctagaattcaccttataaggtgaataa----gtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctaccaactga 30474279  T

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Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 32891384 - 32891292
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||  ||||||||||||    ||||||||||||||||  ||| ||  | || |||||||||||||||||||||||||||||||||||    
32891384 tggctagaattcatcttataagatgaa----taagtggggtgtccggggttcgaaaaccgacccctgcatataataatgcattgtcctaccaactga 32891292  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 9547108 - 9547211
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtccta 204  Q
    |||||||||  |||||||||||||| ||||||||||||    |||||||||||| ||| |||| || | | | |||||||||||||||| ||||||||||    
9547108 aggtagtctattggctagaattcaccttataagatgaa----taagtggggtgttcgggattcgaaccccggcccctgcatataataatacattgtccta 9547203  T
205 ccaactga 212  Q
     |||||||    
9547204 tcaactga 9547211  T

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Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 10207759 - 10207656
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtccta 204  Q
    ||||||| | || |||||||||||  ||||||| |||||||    |||  ||||||||| ||||||||| |||| ||||||||||||||||||| |||||    
10207759 aggtagtttaatagctagaattcatcttataaggtgaataa----gtgaagtgtccggagttcaaactccgaccactgcatataataatgcattatccta 10207664  T
205 ccaactga 212  Q
    ||||||||    
10207663 ccaactga 10207656  T

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Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 44422183 - 44422122
Alignment:
148 taagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaa 208  Q
    ||||||||||||||||  ||| ||||| || |||||||||||||||||||||||||||||||    
44422183 taagtggggtgtccggggttcgaactccgatccctgcatataataatgcattgtcctaccaa 44422122  T

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Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 17240017 - 17239912
Alignment:
104 ttaggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcc 202  Q
    ||||| |||||| ||| |||||||||| |||||||||||||||    ||||||||||||   ||| ||  | ||||| |||||||||||||||||||| |    
17240017 ttagggagtctggtggttagaattcaccttataagatgaataa----gtggggtgtccgaggttcgaatcccgacccctgcatataataatgcattgttc 17239922  T
203 taccaactga 212  Q
    ||||||||||    
17239921 taccaactga 17239912  T

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Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 29664717 - 29664624
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcc 202  Q
    |||||||||  |||||||||||||| ||||||||||||    |||||||||||||||| |||  ||| | || |||||||||||| ||||||||||||    
29664717 aggtagtctagtggctagaattcaccttataagatgaa----taagtggggtgtccgggatttgaaccccgacccctgcatataacaatgcattgtcc 29664624  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 580775 - 580867
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||  ||||||| ||||    ||||||||||||||||  ||| || | | | |||||||||||||||||||||||||||||||||||    
580775 tggctagaattcatcttataaggtgaa----taagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactga 580867  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 20122467 - 20122559
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| |||||||||||||||    |||| ||||||||  ||| ||| | | ||| | ||||||||||||||||||||||||||||||    
20122467 tggctagaattcaccttataagatgaataa----gtggcgtgtccggggttcgaaccccggcccctacatataataatgcattgtcctaccaactga 20122559  T

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Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 22538642 - 22538550
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    ||| ||||| ||| |||| ||| |  |||| ||||||||||||||||||||||||||||||||    
22538642 tggctagaattcaccttataaggtgaataa----gtgaggtgttcgggattcgaaccccaacccctgcatataataatgcattgtcctaccaactga 22538550  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 36426848 - 36426936
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||| |||||||||||||||    ||||||||| |||| ||| ||| |  |||| | ||||||||||||||||||||||||||    
36426848 tggctagaattcaccttataagatgaataa----gtggggtgttcggagttcgaaccccaacccctacatataataatgcattgtcctaccaa 36426936  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 9796997 - 9796918
Alignment:
120 ctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcc 202  Q
    ||||||||||| |||||||||||||||    |||||||||||||  ||| ||| | ||||| ||||||||||||||||||||||    
9796997 ctagaattcaccttataagatgaataa----gtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcc 9796918  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 10262784 - 10262750
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
10262784 ccctgcatataataatgcattgtcctaccaactga 10262750  T

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Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 26807134 - 26807168
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
26807134 ccctgcatataataatgcattgtcctaccaactga 26807168  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 27495583 - 27495549
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
27495583 ccctgcatataataatgcattgtcctaccaactga 27495549  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 31564140 - 31564106
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
31564140 ccctgcatataataatgcattgtcctaccaactga 31564106  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 32943453 - 32943350
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtccta 204  Q
    |||||||||  |||||| |||| || ||||||| |||||||    |||||||||||| ||||| ||| |   || |||||||||||||||||||||||||    
32943453 aggtagtctagtggctaaaatttactttataaggtgaataa----gtggggtgtccgaaattcgaaccccagcctctgcatataataatgcattgtccta 32943358  T
205 ccaactga 212  Q
    ||||||||    
32943357 ccaactga 32943350  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 36520799 - 36520864
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||  ||| ||| | ||||| | ||||||||||||||||||||||||||||||    
36520799 taagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcctaccaactga 36520864  T

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Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 11133179 - 11133086
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgt-cctaccaactga 212  Q
    |||||||||||||| ||||||| ||||    ||||||||||||||||  ||| ||| | || |||||||||||| |||||||||| ||||||||||||    
11133179 tggctagaattcaccttataaggtgaa----taagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtccctaccaactga 11133086  T

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Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 17154752 - 17154663
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtcctaccaac 209  Q
    ||||||||| |||| ||||||| |||||||    |||||||||||||  ||| || | | | ||||||||||||||||||||||||||||||||    
17154752 tggctagaactcaccttataaggtgaataa----gtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaac 17154663  T

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Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 24034103 - 24034135
Alignment:
178 ccctgcatataataatgcattgtcctaccaact 210  Q
    |||||||||||||||||||||||||||||||||    
24034103 ccctgcatataataatgcattgtcctaccaact 24034135  T

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Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 36481111 - 36481080
Alignment:
181 tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||    
36481111 tgcatataataatgcattgtcctaccaactga 36481080  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 41711658 - 41711717
Alignment:
151 gtggggtgtccggaattcaaactctgac-cctgcatataataatgcattgtcctaccaac 209  Q
    |||||||||||||  ||||||| | ||| ||| |||||||||||||||||||||||||||    
41711658 gtggggtgtccggggttcaaacaccgactcctacatataataatgcattgtcctaccaac 41711717  T

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Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 44721696 - 44721788
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| ||||||| |    ||||||||||   ||| ||| | ||||| |||||||||||||||||||| |||||||||||    
44721696 tggctagaattcaccttataaggtgaataaat----ggggtgtccgaggttcgaaccccgacccctgcatataataatgcattgttctaccaactga 44721788  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 3179369 - 3179335
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||| |||||||||||    
3179369 ccctgcatataataatgcattgttctaccaactga 3179335  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 7086298 - 7086264
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||| ||||||||||||    
7086298 ccctgcatataataatgcattgccctaccaactga 7086264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 15690084 - 15690118
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||| ||||||||||||||||||||||    
15690084 ccctgcatataacaatgcattgtcctaccaactga 15690118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 18386805 - 18386892
Alignment:
118 ggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactct-gaccctgcatataataatgcattgtcctaccaa 208  Q
    ||||||||||||  ||||||| |||||||    |||||||||||||| ||| ||| |  | |||| ||||||||||||||||||||||||||    
18386805 ggctagaattcatcttataaggtgaataa----gtggggtgtccggagttcgaaccccagcccctacatataataatgcattgtcctaccaa 18386892  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Original strand, 19052661 - 19052691
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
19052661 ccctgcatataataatgcattgtcctaccaa 19052691  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 19905636 - 19905735
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtccta 204  Q
    |||||| || ||||||||||||||| ||||||| ||||    ||||| ||||||||||  ||| ||| | || ||||| ||||||||||||||||||| |    
19905636 aggtagcctaatggctagaattcaccttataaggtgaa----taagtcgggtgtccggggttcgaaccccgacccctgtatataataatgcattgtccaa 19905731  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 25050290 - 25050324
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||| |||||||||||||    
25050290 ccctgcatataataatgcattatcctaccaactga 25050324  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 25732041 - 25731956
Alignment:
116 atggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtc 201  Q
    |||| |||||||||| |||||||| ||  ||| ||||||||||||||   ||| ||||| ||||| |||||||||||||||||||||    
25732041 atggttagaattcaccttataagaagatgaat-aagtggggtgtccgaggttcgaactccgacccctgcatataataatgcattgtc 25731956  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 31956911 - 31956877
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
31956911 ccctacatataataatgcattgtcctaccaactga 31956877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 36665475 - 36665441
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||| ||||||    
36665475 ccctgcatataataatgcattgtcctacaaactga 36665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 38530245 - 38530279
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||| |||||||||||||||||||||||||||||    
38530245 ccctgtatataataatgcattgtcctaccaactga 38530279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 38820688 - 38820586
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaa-ctctgaccctgcatataataatgcattgtccta 204  Q
    ||||||| | ||||||||||||||| ||||||||||||    ||| ||||||||| ||  |||||| | | | |||| ||||||||||||||||||||||    
38820688 aggtagtttaatggctagaattcaccttataagatgaa----taaatggggtgtctgg-gttcaaaccccagcccctacatataataatgcattgtccta 38820594  T
205 ccaactga 212  Q
     |||||||    
38820593 acaactga 38820586  T

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Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 39726484 - 39726518
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
39726484 ccctacatataataatgcattgtcctaccaactga 39726518  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Complemental strand, 1836628 - 1836599
Alignment:
183 catataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||    
1836628 catataataatgcattgtcctaccaactga 1836599  T

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Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 3364828 - 3364738
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctaccaact 210  Q
    |||||||||||||| ||| |||||||||||    ||||||||||   | ||| ||| || | ||||||||||||||||| |||||||||||||||    
3364828 tggctagaattcaccttaaaagatgaataa----gtggggtgtctaaagttcgaacctcggcccctgcatataataatgtattgtcctaccaact 3364738  T

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Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 15392266 - 15392295
Alignment:
183 catataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||    
15392266 catataataatgcattgtcctaccaactga 15392295  T

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Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 34620630 - 34620532
Alignment:
108 gtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccct-gcatataataatgcattgtcctacc 206  Q
    |||||||  |||||||||||||| ||||||| ||||||| ||    | ||||| ||  ||||||| |  ||||| |||||||||||||||||||||||||    
34620630 gtagtctagtggctagaattcaccttataaggtgaataaata----gagtgtctggggttcaaaccccaacccttgcatataataatgcattgtcctacc 34620535  T

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Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 42091325 - 42091358
Alignment:
179 cctgcatataataatgcattgtcctaccaactga 212  Q
    |||| |||||||||||||||||||||||||||||    
42091325 cctgaatataataatgcattgtcctaccaactga 42091358  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 18364425 - 18364457
Alignment:
178 ccctgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||||||||||||||| |||||||||    
18364425 ccctgcatataataatgcattgttctaccaact 18364457  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 43871029 - 43870973
Alignment:
148 taagtggggtgtccggaattcaaactctgac-cctgcatataataatgcattgtcct 203  Q
    |||||||||||||||| |||| ||| | | | |||||||||||||||||||||||||    
43871029 taagtggggtgtccgggattcgaaccccggctcctgcatataataatgcattgtcct 43870973  T

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Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 23925655 - 23925554
Alignment:
108 gtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctacc 206  Q
    |||||||  |||||||||||||| |||||||||||||||    ||||||| ||||| |||| ||| | ||||| |||||||||||||||||||||||| |    
23925655 gtagtctagtggctagaattcaccttataagatgaataa----gtggggtatccgggattcgaacccagacccctgcatataataatgcattgtcctatc 23925560  T
207 aactga 212  Q
    ||||||    
23925559 aactga 23925554  T

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Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 29096300 - 29096392
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccct-gcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||||||  ||| ||||| | |||| |||||||||||||||||||||||||||||||    
29096300 tggctagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaactccggcccttgcatataataatgcattgtcctaccaactga 29096392  T

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Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 36888074 - 36888177
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    |||||||||| ||||| |||||||| |||||||||||||||    ||||||| ||| | |||| ||| | | ||| ||||||||||||||||||||||||    
36888074 aggtagtctggtggcttgaattcaccttataagatgaataa----gtggggtctccaggattccaaccccggcccctgcatataataatgcattgtccta 36888169  T
205 ccaactga 212  Q
    ||||||||    
36888170 ccaactga 36888177  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 42455373 - 42455478
Alignment:
104 ttaggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcc 202  Q
    |||||||| ||  |||||||||||||| ||||||| |||||||    |||| ||||||||  ||| ||||| | ||| ||||||||||||||||||||||    
42455373 ttaggtagcctagtggctagaattcaccttataaggtgaataa----gtggagtgtccggggttcgaactccggcccctgcatataataatgcattgtcc 42455468  T
203 taccaactga 212  Q
    ||||||||||    
42455469 taccaactga 42455478  T

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Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 6671778 - 6671870
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| |||||||||||||||    ||| | |||||||||||| ||| ||||   ||| |||||||||||||||||||||||||||||    
6671778 tggctagaattcaccttataagatgaataa----gtgagatgtccggaattcgaaccctgatttctgtatataataatgcattgtcctaccaactga 6671870  T

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Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 20945883 - 20945971
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||| ||||||| |||||||    |||||||||||||| ||| ||| | | ||| ||||||||||||||||||||||||||||    
20945883 tggctagaattcaccttataaggtgaataa----gtggggtgtccggatttcgaaccccggcccctgcatataataatgcattgtcctaccaa 20945971  T

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Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 1244719 - 1244810
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactg 211  Q
    |||||||||||||| ||||||| |||||||    |||||||||| ||  ||| ||| ||||||| ||||||||||||||| |||||||||||||||    
1244719 tggctagaattcaccttataaggtgaataa----gtggggtgtctggggttcgaaccctgacccctgcatataataatgctttgtcctaccaactg 1244810  T

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Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 29050877 - 29050811
Alignment:
147 ttaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||| ||||||| | | ||| ||||||||||||||||||||||||||||||||    
29050877 ttaaatggggtgtccggagttcaaaccccggcccctgcatataataatgcattgtcctaccaactga 29050811  T

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Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 6014882 - 6014792
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaact 210  Q
    |||||||||||||| ||||||||||||    |||||| |||||||||| ||||||| | || |||| |||||||||||||||| |||||| ||||    
6014882 tggctagaattcaccttataagatgaa----taagtgaggtgtccggagttcaaaccccgatccctacatataataatgcattatcctacaaact 6014792  T

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Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 29144214 - 29144153
Alignment:
152 tggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||| ||| ||||||| | ||||| ||||||||||||||||||||||||||||||||    
29144214 tggggtgtctggagttcaaaccccgacccctgcatataataatgcattgtcctaccaactga 29144153  T

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Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 43404454 - 43404393
Alignment:
152 tggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| || ||||||||||| ||| |||||| |||||||||||||||||||||||||    
43404454 tggggtgtccagagttcaaactctggcccctgcatacaataatgcattgtcctaccaactga 43404393  T

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Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 22599955 - 22600019
Alignment:
148 taagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||| ||  ||||||  |  ||||||||||||||||||||||||||||||||||||    
22599955 taagtggggtgtctggggttcaaatcccaaccctgcatataataatgcattgtcctaccaactga 22600019  T

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Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 26302493 - 26302574
Alignment:
124 aattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaac 209  Q
    ||||||| |||||||||||||||    ||||||||||||   ||| ||||| | ||||| ||||||||||||||||||||||||||    
26302493 aattcaccttataagatgaataa----gtggggtgtccgaggttcgaactccggccctgtatataataatgcattgtcctaccaac 26302574  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 30403849 - 30403761
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| |||||||    |||||||||||||  ||||||||| | ||| || ||||||||||| |||||||||||||||||    
30403849 tagaattcaccttataaggtgaataa----gtggggtgtccggggttcaaactccggcccctgtatataataatgtattgtcctaccaactga 30403761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 18478117 - 18478014
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccct-gcatataataatgcattgtccta 204  Q
    |||||| || ||||||||||||||| ||||||| |||||||    ||||||||||| |  ||| ||| | | |||  |||||||||||||||||||||||    
18478117 aggtagcctaatggctagaattcaccttataaggtgaataa----gtggggtgtccagggttcgaaccccggccccagcatataataatgcattgtccta 18478022  T
205 ccaactga 212  Q
    ||||||||    
18478021 ccaactga 18478014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 18872566 - 18872532
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
18872566 ccctgcatataataatgcattgtcctaccaactga 18872532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 26169062 - 26169096
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
26169062 ccctgcatataataatgcattgtcctaccaactga 26169096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 29106019 - 29106118
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaact-ctgaccctgcatataataatgcattgtccta 204  Q
    |||||||||| ||||||||||| || ||||||| |||||||    ||||||||||  |  ||| |||| | | |||||||||||||||||||||||||||    
29106019 aggtagtctggtggctagaattaaccttataaggtgaataa----gtggggtgtctagggttcgaacttcggcccctgcatataataatgcattgtccta 29106114  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 29841462 - 29841359
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtccta 204  Q
    |||||| || |||||||||||| || |||||||  |||    ||||||||||||||||  ||| || ||| | || ||||||||||||||||||||||||    
29841462 aggtagcctaatggctagaatttaccttataaggggaa----taagtggggtgtccggggttcgaatctcggcccttgcatataataatgcattgtccta 29841367  T
205 ccaactga 212  Q
    ||||||||    
29841366 ccaactga 29841359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 33729823 - 33729789
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
33729823 ccctgcatataataatgcattgtcctaccaactga 33729789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 33800938 - 33800904
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
33800938 ccctgcatataataatgcattgtcctaccaactga 33800904  T

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Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 2411288 - 2411378
Alignment:
119 gctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||  ||||||||||||||    |||||||||| ||  ||| ||||| | ||| ||||||||||||| ||||||||||||||||||    
2411288 gctagaattcaccatataagatgaataa----gtggggtgtctggggttcgaactccggcccctgcatataataatacattgtcctaccaactga 2411378  T

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Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 27440350 - 27440382
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||    
27440350 ctgcatataataatgcattgtcctaccaactga 27440382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 31934927 - 31934959
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||    
31934927 ctgcatataataatgcattgtcctaccaactga 31934959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 6561997 - 6561909
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| ||||||     ||||||||| |||| ||| ||||| || ||||||||| ||||||||||| |||||||||||||    
6561997 tagaattcaccttataaggtgaatat----gtggggtgttcggagttcgaactccgatccctgcataaaataatgcattatcctaccaactga 6561909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 9577344 - 9577313
Alignment:
181 tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||    
9577344 tgcatataataatgcattgtcctaccaactga 9577313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 19058996 - 19059088
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    ||||||||||| |  ||| ||| | | ||| ||||||| ||||||||||||||||||||||||    
19058996 tggctagaattcaccttataaggtgaataa----gtggggtgtccagggttcgaaccccggcccctgcatatgataatgcattgtcctaccaactga 19059088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 22863811 - 22863780
Alignment:
181 tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||    
22863811 tgcatataataatgcattgtcctaccaactga 22863780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 211
Target Start/End: Complemental strand, 23648372 - 23648341
Alignment:
180 ctgcatataataatgcattgtcctaccaactg 211  Q
    ||||||||||||||||||||||||||||||||    
23648372 ctgcatataataatgcattgtcctaccaactg 23648341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 23810200 - 23810231
Alignment:
180 ctgcatataataatgcattgtcctaccaactg 211  Q
    ||||||||||||||||||||||||||||||||    
23810200 ctgcatataataatgcattgtcctaccaactg 23810231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 32158406 - 32158494
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||| ||||||| |||||||    ||||||||| |||  ||| ||| | | ||| ||||||||||||||||||||||||||||    
32158406 tggctagaattcaccttataaggtgaataa----gtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcctaccaa 32158494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 7645154 - 7645184
Alignment:
180 ctgcatataataatgcattgtcctaccaact 210  Q
    |||||||||||||||||||||||||||||||    
7645154 ctgcatataataatgcattgtcctaccaact 7645184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 9176836 - 9176870
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||| ||||||||    
9176836 ccctgcatataataatgcattgtccttccaactga 9176870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 10508625 - 10508591
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||| ||||||||||||||||||    
10508625 ccctgcatataataatacattgtcctaccaactga 10508591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 13754051 - 13754017
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||| |||||||||||||||||    
13754051 ccctgcatataataatgtattgtcctaccaactga 13754017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 14487606 - 14487572
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
14487606 ccctacatataataatgcattgtcctaccaactga 14487572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 20699479 - 20699509
Alignment:
182 gcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||    
20699479 gcatataataatgcattgtcctaccaactga 20699509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 29629928 - 29629966
Alignment:
108 gtagtctgatggctagaattcacattataagatgaataa 146  Q
    |||||||| |||||||||||||| |||||||||||||||    
29629928 gtagtctggtggctagaattcaccttataagatgaataa 29629966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 40339149 - 40339183
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||| ||||||    
40339149 ccctgcatataataatgcattgtcctactaactga 40339183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 2029120 - 2029210
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaact 210  Q
    |||||||||||||| ||||||| |||||||    ||||||||| |||  ||| ||  | ||||| ||||||||||||| ||||||||||||||||    
2029120 tggctagaattcaccttataaggtgaataa----gtggggtgttcggggttcgaatcccgacccctgcatataataatacattgtcctaccaact 2029210  T

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Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 21017661 - 21017690
Alignment:
183 catataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||    
21017661 catataataatgcattgtcctaccaactga 21017690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 24205511 - 24205447
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||  ||| ||| ||||||| | ||||||| ||||||||||||||||||||||    
24205511 taagtggggtgtccggggttcgaac-ctgacccctacatataacaatgcattgtcctaccaactga 24205447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 27219616 - 27219645
Alignment:
181 tgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||||||||||||||||||||||    
27219616 tgcatataataatgcattgtcctaccaact 27219645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 973026 - 973058
Alignment:
178 ccctgcatataataatgcattgtcctaccaact 210  Q
    ||||| |||||||||||||||||||||||||||    
973026 ccctgtatataataatgcattgtcctaccaact 973058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 7234927 - 7234959
Alignment:
183 catataataatgcattgtcctaccaactgacac 215  Q
    |||||||||||||||||||||||| ||||||||    
7234927 catataataatgcattgtcctaccgactgacac 7234959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 30394612 - 30394580
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||| |||||||||||||||||||||||||||    
30394612 ctgcaaataataatgcattgtcctaccaactga 30394580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Complemental strand, 34010574 - 34010546
Alignment:
184 atataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||    
34010574 atataataatgcattgtcctaccaactga 34010546  T

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Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 8740648 - 8740740
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||||||||||| ||    ||||||||||| ||| ||| || | |||||||||||||| ||||||||||||||||||||    
8740648 tggctagaattcaccttataagatgaataagta----gggtgtccggagttcgaacctcagcccctgcatataatactgcattgtcctaccaactga 8740740  T

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Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 39484366 - 39484454
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| |||||||||||||||    ||||||||||||| |||| ||| | | ||| ||||||||||||||||||||||||||||||||    
39484366 tagaattcaccttataagatgaataa----gtggggtgtccggcattcgaaccccggcccctgcatataataatgcattgtcctaccaactga 39484454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 34073218 - 34073323
Alignment:
104 ttaggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcc 202  Q
    |||||||||||  |||||||||||||| ||||||| ||||    ||||||||||||||||  ||| |||  ||| |||| |||||||||||||||| |||    
34073218 ttaggtagtctcgtggctagaattcaccttataaggtgaa----taagtggggtgtccggggttcgaaccttgacccctacatataataatgcattatcc 34073313  T
203 taccaactga 212  Q
    ||||||||||    
34073314 taccaactga 34073323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 26703882 - 26703974
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccct-gcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    ||| ||||| ||| |||| ||| | |||||| |||||||||||||||||||||||||||||||    
26703882 tggctagaattcaccttataaggtgaataa----gtgaggtgttcgggattcgaaccccgacccttgcatataataatgcattgtcctaccaactga 26703974  T

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Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 43468697 - 43468789
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||||||| ||| ||| | ||||| | ||||||| ||||||||||||||||||||||    
43468697 tggctagaattcaccttataaggtgaataa----gtggggtgtccggagttcgaaccccgacccctacatataacaatgcattgtcctaccaactga 43468789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 10184782 - 10184880
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtccta 204  Q
    ||||||||| ||||||||||||||| ||||||| ||||||| |    || ||||||||| ||| ||| || | |||| ||||||||||||||||||||||    
10184782 aggtagtctaatggctagaattcaccttataaggtgaataaat----ggagtgtccggagttcgaacctcagtccctacatataataatgcattgtccta 10184877  T

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Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 13762531 - 13762596
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||   ||| ||| ||||||| ||||||||||||||||||||||||||||||||    
13762531 taagtggggtgtccgtggttcgaacactgacccctgcatataataatgcattgtcctaccaactga 13762596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 15042361 - 15042449
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| |||||||    |||||||||||||  ||| || | | | |||||||||||||||||||||||||||||||||||    
15042361 tagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactga 15042449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 17987441 - 17987533
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||| ||||||| ||||||| |||||||||    |||||||||||  ||| ||||| | ||| |||||||||||||||||| |||||||||||||    
17987441 tggctataattcaccttataaggtgaataatt----ggggtgtccggggttcgaactccggcccctgcatataataatgcattatcctaccaactga 17987533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 4798522 - 4798625
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtccta 204  Q
    |||||||||  |||||||||||||| ||| ||| ||||    ||||||||||||||||  ||| || | | | ||||||||||||||||||||| |||||    
4798522 aggtagtctagtggctagaattcaccttacaaggtgaa----taagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattatccta 4798617  T
205 ccaactga 212  Q
    ||||||||    
4798618 ccaactga 4798625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 9525002 - 9524968
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
9525002 ccctgcatataataatgcattgtcctaccaactga 9524968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 10310358 - 10310304
Alignment:
148 taagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtc 201  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||    
10310358 taagtggggtgtccgggattcaaactccgacctctgtatataataatgcattgtc 10310304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 23857374 - 23857408
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
23857374 ccctgcatataataatgcattgtcctaccaactga 23857408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 24608533 - 24608567
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
24608533 ccctgcatataataatgcattgtcctaccaactga 24608567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 25139868 - 25139971
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtccta 204  Q
    ||||||| || ||| |||||||||||||||||||||||    |||||||| ||| |||  ||| ||| | || ||||||||||||||||||||||| |||    
25139868 aggtagtttggtggttagaattcacattataagatgaa----taagtgggatgttcggggttcgaaccccgacccctgcatataataatgcattgttcta 25139963  T
205 ccaactga 212  Q
     |||||||    
25139964 acaactga 25139971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 28465663 - 28465629
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
28465663 ccctgcatataataatgcattgtcctaccaactga 28465629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 40249906 - 40249964
Alignment:
155 ggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||| ||||| || | |||||||||||||||||||||||||||||||||    
40249906 ggtgtccggagttcgaactccgatcactgcatataataatgcattgtcctaccaactga 40249964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 41089170 - 41089232
Alignment:
149 aagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaact 210  Q
    ||||| |||||||||  ||||||| | ||||| ||||||||||||||||||||||||||||||    
41089170 aagtgaggtgtccggtgttcaaaccccgacccctgcatataataatgcattgtcctaccaact 41089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 43847747 - 43847713
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
43847747 ccctgcatataataatgcattgtcctaccaactga 43847713  T

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Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 14683990 - 14683900
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgt 200  Q
    |||||||||  || ||||||||||| ||||||| |||||||    ||||| |||||||  ||| ||| | |||||||||||||||||||||||||    
14683990 aggtagtctagtgactagaattcaccttataaggtgaataa----gtgggatgtccggggttcgaaccccgaccctgcatataataatgcattgt 14683900  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 36359699 - 36359783
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaact-ctgaccctgcatataataat 193  Q
    |||||||||  |||||||||||||| ||||||| ||||    |||||||||||||||| |||| |||| | | ||||||||||||||||    
36359699 aggtagtctagtggctagaattcaccttataaggtgaa----taagtggggtgtccgggattcgaactccggcccctgcatataataat 36359783  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 1033010 - 1033044
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||| |||||||||    
1033010 ccctgcatataataatgcattgtcccaccaactga 1033044  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 2376563 - 2376533
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
2376563 ccctgcatataataatgcattgtcctaccaa 2376533  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 5184937 - 5184971
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||| ||||||||||||||||||    
5184937 ccctgcatataataatccattgtcctaccaactga 5184971  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Original strand, 7540538 - 7540568
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
7540538 ccctgcatataataatgcattgtcctaccaa 7540568  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 10199792 - 10199826
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||| ||||||    
10199792 ccctgcatataataatgcattgtcctactaactga 10199826  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 10970311 - 10970277
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||| |||||||||||||    
10970311 ccctgcatataataatgcattatcctaccaactga 10970277  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 17980327 - 17980293
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||| ||||||||||||||||    
17980327 ccctgcatataataatgctttgtcctaccaactga 17980293  T

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Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 24074551 - 24074517
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
24074551 ccctacatataataatgcattgtcctaccaactga 24074517  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 25119253 - 25119223
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
25119253 ccctgcatataataatgcattgtcctaccaa 25119223  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 27822115 - 27822081
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||| |||||||||||||    
27822115 ccctgcatataataatgcattatcctaccaactga 27822081  T

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Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 29514255 - 29514221
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||| |||||||||||||||||||    
29514255 ccctgcatataataaagcattgtcctaccaactga 29514221  T

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Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 36467934 - 36467968
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||| ||||||||||    
36467934 ccctgcatataataatgcattgtcataccaactga 36467968  T

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Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 42688101 - 42688067
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
42688101 ccctacatataataatgcattgtcctaccaactga 42688067  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 42761915 - 42761949
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||| ||||||||||    
42761915 ccctgcatataataatgcattgtcataccaactga 42761949  T

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Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 9737379 - 9737444
Alignment:
148 taagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||| ||| ||| || | ||||  ||||||||||| |||||||||||||||||    
9737379 taagtggggtgtccggagttcgaacctcggcccctatatataataatgtattgtcctaccaactga 9737444  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Complemental strand, 29108702 - 29108673
Alignment:
183 catataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||    
29108702 catataataatgcattgtcctaccaactga 29108673  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 41225720 - 41225749
Alignment:
183 catataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||    
41225720 catataataatgcattgtcctaccaactga 41225749  T

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Target: scaffold1086 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 2602 - 2499
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtccta 204  Q
    |||||||||  ||||| |||||||| ||||||| |||||||    |||||||||||||  ||||||||   ||| |||||||||||||||||||||||||    
2602 aggtagtctagtggctggaattcaccttataaggtgaataa----gtggggtgtccggggttcaaacttcaacctctgcatataataatgcattgtccta 2507  T
205 ccaactga 212  Q
    ||||||||    
2506 ccaactga 2499  T

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Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 4354086 - 4354189
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtccta 204  Q
    |||||| ||| |||||||||||||| ||||||| ||||    ||||||||||||||| | ||| || | | | |||||||||||||||||||||||||||    
4354086 aggtagcctggtggctagaattcactttataaggtgaa----taagtggggtgtccgaagttcgaaccccggcccctgcatataataatgcattgtccta 4354181  T
205 ccaactga 212  Q
    ||||||||    
4354182 ccaactga 4354189  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 18923876 - 18923969
Alignment:
116 atggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||| ||||||| ||||||     ||||||||||||   ||| ||| |||| |||||||||||||||||||||||||||||||||||    
18923876 atggctagaattcaccttataaggtgaatac----gtggggtgtccgaggttcgaaccctgaaccctgcatataataatgcattgtcctaccaactga 18923969  T

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Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 6014514 - 6014600
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| |||||||    |||||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||||||    
6014514 tagaattcaccttataaggtgaataa----gtggggtgtccggaattcgaact-tgatccctgcatataat-atgcattgtcctaccaactga 6014600  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 15368908 - 15368816
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattc-aaactctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| |||||| |||||    ||||||||||||||||  ||| || | | | |||||||||||||||||||||||||||||||||||    
15368908 tggctagaattcaccttataaaatgaa----taagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactga 15368816  T

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Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 15774304 - 15774396
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||||||||||||  ||| ||| | ||||| | ||||||||||||||||||||||||||||||    
15774304 tggctagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcctaccaactga 15774396  T

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Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 49251391 - 49251479
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||| |||||||    |||||||||| ||  ||| ||| | ||||| ||||||||||||||||||||||||||||||||    
49251391 tagaattcacattataaggtgaataa----gtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactga 49251479  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 9408633 - 9408698
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||| ||||||| |||| ||||| ||||| ||||| ||||||||||||||||||||||||||    
9408633 taagtgggttgtccgggattcgaactccgacccctgcatttaataatgcattgtcctaccaactga 9408698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 9527540 - 9527447
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcc 202  Q
    |||||||||  |||||||||||||| ||||||||||||    |||||||||||||| |  ||||||| | || |||||||||||| ||||||||||||    
9527540 aggtagtctagtggctagaattcaccttataagatgaa----taagtggggtgtccagggttcaaaccccgacccctgcatataacaatgcattgtcc 9527447  T

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Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 19793625 - 19793537
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaact-ctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| |||||||    |||||||||||||  ||| || | | | |||||||||||||||||||||||||||||||||||    
19793625 tagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaattccggcccctgcatataataatgcattgtcctaccaactga 19793537  T

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Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 24014600 - 24014692
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||| | ||||||| |||||||||    ||||||||| || ||| ||||| | ||| ||||||||||||||||||||| ||||||||||    
24014600 tggctagaattccctttataagttgaataatt----ggggtgtccagagttcgaactccggcccctgcatataataatgcattgtcttaccaactga 24014692  T

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Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 37733854 - 37733766
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgacc-ctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||| ||||||| |||||||    |||||||||||||  ||| ||| | | || |||||||||||||||||||||||||||||||||    
37733854 tagaattcaccttataaggtgaataa----gtggggtgtccggggttcgaaccccgtccactgcatataataatgcattgtcctaccaactga 37733766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 4429532 - 4429566
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
4429532 ccctgcatataataatgcattgtcctaccaactga 4429566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 15051623 - 15051557
Alignment:
148 taagtggggtgtccggaattcaaactctgaccct-gcatataataatgcattgtcctaccaactgac 213  Q
    |||||||||||||| || || |||| | |||||| ||||||||||||||||||| ||||||||||||    
15051623 taagtggggtgtccagagtttaaaccccgacccttgcatataataatgcattgttctaccaactgac 15051557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 20357505 - 20357471
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
20357505 ccctgcatataataatgcattgtcctaccaactga 20357471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 20562450 - 20562484
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
20562450 ccctgcatataataatgcattgtcctaccaactga 20562484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 23464036 - 23464070
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
23464036 ccctgcatataataatgcattgtcctaccaactga 23464070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 23930594 - 23930628
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
23930594 ccctgcatataataatgcattgtcctaccaactga 23930628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 29331212 - 29331246
Alignment:
176 gaccctgcatataataatgcattgtcctaccaact 210  Q
    |||||||||||||||||||||||||||||||||||    
29331212 gaccctgcatataataatgcattgtcctaccaact 29331246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 32711136 - 32711223
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||| ||||||| |||||||    |||||||||| ||  ||| ||| | | ||||||||||||||||||||||| |||||||    
32711136 tggctagaattcaccttataaggtgaataa----gtggggtgtctggggttcgaaccccggccctgcatataataatgcattgttctaccaa 32711223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 37490935 - 37490901
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
37490935 ccctgcatataataatgcattgtcctaccaactga 37490901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 38019998 - 38020032
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
38019998 ccctgcatataataatgcattgtcctaccaactga 38020032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 43555924 - 43555958
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
43555924 ccctgcatataataatgcattgtcctaccaactga 43555958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 21884687 - 21884590
Alignment:
108 gtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctacc 206  Q
    |||||||  ||| |||||||||| ||||||| |||||||    |||||||||| ||  ||| ||| || | |||||||||||||||||||||||||||||    
21884687 gtagtctagtggttagaattcaccttataaggtgaataa----gtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctacc 21884592  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 13870100 - 13870155
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcc 202  Q
    |||||||||||||||| |||||||| | | ||| ||||||||||||||||||||||    
13870100 taagtggggtgtccgggattcaaaccccggcccctgcatataataatgcattgtcc 13870155  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 17056930 - 17056961
Alignment:
178 ccctgcatataataatgcattgtcctaccaac 209  Q
    ||||||||||||||||||||||||||||||||    
17056930 ccctgcatataataatgcattgtcctaccaac 17056961  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 24662085 - 24661997
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||| ||||||| ||||||| |    |||||||| ||  ||| ||  ||||||| ||||||||||||||||||||||||||||    
24662085 tggctagaattcaccttataagttgaataaat----ggggtgtctggggttcgaatcctgacccctgcatataataatgcattgtcctaccaa 24661997  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 43237827 - 43237784
Alignment:
170 aactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||    
43237827 aactctgacccctgcatataataatgcattgtcctaccagctga 43237784  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 48110632 - 48110540
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||| ||||| |||||||||||||||    ||| ||||||||   ||| |||||  |||| |||||||||||||||||||| |||||||||||    
48110632 tggctagatttcaccttataagatgaataa----gtgaggtgtccgaggttcgaactccaacccctgcatataataatgcattgttctaccaactga 48110540  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 49916543 - 49916455
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||| |||||| |||||||| |    ||| ||||||| |||| ||| | ||||| | ||||||||||||||||||||||||||    
49916543 tggctagaattcaccttataatatgaataaat----gggatgtccgggattcgaaccccgacccctacatataataatgcattgtcctaccaa 49916455  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 538379 - 538413
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||| |||||||||||    
538379 ccctgcatataataatgcattgttctaccaactga 538413  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Original strand, 2208688 - 2208718
Alignment:
178 ccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||||||||||||||||||||    
2208688 ccctgcatataataatgcattgtcctaccaa 2208718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 5172652 - 5172686
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||| |||||||    
5172652 ccctgcatataataatgcattgtcctatcaactga 5172686  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 8261725 - 8261759
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||| |||||||||||||    
8261725 ccctgcatataataatgcattatcctaccaactga 8261759  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 11802070 - 11802104
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||| ||||||||||||||||||||||||||||||    
11802070 ccctacatataataatgcattgtcctaccaactga 11802104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 16110070 - 16110104
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||| |||||||    
16110070 ccctgcatataataatgcattgtcctatcaactga 16110104  T

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Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 17871129 - 17871163
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||| |||||||    
17871129 ccctgcatataataatgcattgtcctatcaactga 17871163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 23345105 - 23345139
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||| ||||||||||||||||||||||    
23345105 ccctgcatataacaatgcattgtcctaccaactga 23345139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 24636838 - 24636735
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgac-cctgcatataataatgcattgtccta 204  Q
    ||||||||| |||||||||||| || |||| || |||||||    ||| |||||||||| ||| ||||| | | ||| |||||||||||| |||||| ||    
24636838 aggtagtctaatggctagaatttaccttatcaggtgaataa----gtgaggtgtccggagttcgaactccggctcctacatataataatgtattgtcata 24636743  T
205 ccaactga 212  Q
    ||||||||    
24636742 ccaactga 24636735  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 34560319 - 34560421
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtccta 204  Q
    |||||||||  || ||||||||||| ||||||| |||||||    ||||||||||||   ||| ||| ||||||| | |||||||||||||||| |||||    
34560319 aggtagtctagtgactagaattcaccttataaggtgaataa----gtggggtgtccgaggttcgaac-ctgacccatacatataataatgcattatccta 34560413  T
205 ccaactga 212  Q
    ||||||||    
34560414 ccaactga 34560421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 42831992 - 42831958
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||| |||||||||||||||    
42831992 ccctgcatataataatgcaatgtcctaccaactga 42831958  T

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Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 47939218 - 47939272
Alignment:
148 taagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcc 202  Q
    ||||||||||||||||| ||| ||| |  ||||||||||||| ||||||||||||    
47939218 taagtggggtgtccggagttcgaaccccaaccctgcatataacaatgcattgtcc 47939272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 11405559 - 11405477
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcc 202  Q
    |||||||||||||| ||||||| ||||    ||||||||||||||||  ||| ||| | || |||||||||||| ||||||||||||    
11405559 tggctagaattcaccttataaggtgaa----taagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtcc 11405477  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 29442022 - 29442051
Alignment:
183 catataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||    
29442022 catataataatgcattgtcctaccaactga 29442051  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 30632365 - 30632458
Alignment:
106 aggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcc 202  Q
    |||||||||| ||| |||||||||| ||||||||||||||| |  |||| || || ||| || || ||| | |||||||||||| ||||||||||||    
30632365 aggtagtctggtggttagaattcaccttataagatgaataagt--gtggtgt-tcgggatttgaacctcggcccctgcatataacaatgcattgtcc 30632458  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Complemental strand, 38851675 - 38851646
Alignment:
183 catataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||    
38851675 catataataatgcattgtcctaccaactga 38851646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 46116170 - 46116256
Alignment:
121 tagaattcacattataagatgaataattaagtggggtgtccggaattcaaactct-gaccctgcatataataatgcattgtcctaccaact 210  Q
    |||||||||| ||||||| |||||||||    |||||||||||  ||| ||| |  | |||||||||| ||||||||||||||||||||||    
46116170 tagaattcaccttataaggtgaataatt----ggggtgtccggggttcgaaccccagcccctgcatatgataatgcattgtcctaccaact 46116256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 49606717 - 49606782
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||| | ||| ||||| | ||| | |||||||||||||||||||||| |||||||    
49606717 taagtggggtgtccgaagttcgaactccggcccctacatataataatgcattgtcctaacaactga 49606782  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 33059544 - 33059576
Alignment:
180 ctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||| |||||||||||||    
33059544 ctgcatataataatgcattatcctaccaactga 33059576  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 38021328 - 38021272
Alignment:
148 taagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcct 203  Q
    ||||||||||||||||  ||| ||||| | ||| |||||||||||||||||||||||    
38021328 taagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcct 38021272  T

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Target: scaffold0334 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 5379 - 5319
Alignment:
148 taagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcctaccaa 208  Q
    ||||||||||||||||  ||| ||| | | |||||||||||||||||||||||||||||||    
5379 taagtggggtgtccggggttcgaacacggcccctgcatataataatgcattgtcctaccaa 5319  T

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Target: scaffold1990 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 997 - 909
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactct-gaccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||| ||||||| |||||||    |||||||||| || |||| ||| |  | |||||||||||||||||||||||||||||||    
997 tggctagaattcaccttataaggtgaataa----gtggggtgtctgggattcgaaccccagcccctgcatataataatgcattgtcctaccaa 909  T

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Target: scaffold0533 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 9429 - 9337
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctgaccc-tgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||| ||||||| |||||||    |||| |||| |||||||| ||| | ||||| ||||| ||||||||||||||||||| ||||||    
9429 tggctagaattcaccttataaggtgaataa----gtggagtgttcggaattcgaaccccgacccctgcatgtaataatgcattgtcctactaactga 9337  T

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Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 47309 - 47397
Alignment:
117 tggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactct-gaccctgcatataataatgcattgtcctaccaa 208  Q
    |||||||||||||| ||||||| |||||||    |||||||||| || |||| ||| |  | |||||||||||||||||||||||||||||||    
47309 tggctagaattcaccttataaggtgaataa----gtggggtgtctgggattcgaaccccagcccctgcatataataatgcattgtcctaccaa 47397  T

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Target: scaffold0809 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 4825 - 4879
Alignment:
148 taagtggggtgtccggaattcaaactctgaccctgcatataataatgcattgtcc 202  Q
    |||||||||||||||| |||| ||| | | |||||||||||||||||||||||||    
4825 taagtggggtgtccgggattcgaaccccgcccctgcatataataatgcattgtcc 4879  T

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Target: scaffold0191 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 16892 - 16858
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
16892 ccctgcatataataatgcattgtcctaccaactga 16858  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 159059 - 159025
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||||||||    
159059 ccctgcatataataatgcattgtcctaccaactga 159025  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 43747 - 43780
Alignment:
179 cctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||||||||||||||||||||||||||    
43747 cctgcatataataatgcattgtcctaccaactga 43780  T

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Target: scaffold0062 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 7068 - 7102
Alignment:
178 ccctgcatataataatgcattgtcctaccaactga 212  Q
    |||||||||||||||||||||||||||||| ||||    
7068 ccctgcatataataatgcattgtcctaccagctga 7102  T

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Target: scaffold0765 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 844 - 755
Alignment:
120 ctagaattcacattataagatgaataattaagtggggtgtccggaattcaaac-tctgaccctgcatataataatgcattgtcctaccaactga 212  Q
    ||||||||||| ||||||| |||||||    ||||||||||| || ||| ||| || | | | ||||||||||||||||||||||| |||||||    
844 ctagaattcactttataaggtgaataa----gtggggtgtccagagttcgaacctcagcctccgcatataataatgcattgtcctatcaactga 755  T

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Target: scaffold0178 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 4439 - 4334
Alignment:
104 ttaggtagtctgatggctagaattcacattataagatgaataattaagtggggtgtccggaattcaaactctga-ccctgcatataataatgcattgtcc 202  Q
    |||||||||||  || ||||||||||| ||||||  ||||    ||||||| ||||||||  ||| ||| | || ||||||||||||||||| |||||||    
4439 ttaggtagtctagtgtctagaattcaccttataaagtgaa----taagtggagtgtccggggttcgaaccccgacccctgcatataataatgtattgtcc 4344  T
203 taccaactga 212  Q
    || |||||||    
4343 tatcaactga 4334  T

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Target: scaffold0178; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 16110 - 16078
Alignment:
178 ccctgcatataataatgcattgtcctaccaact 210  Q
    ||||||||||||||||||||||||||| |||||    
16110 ccctgcatataataatgcattgtcctatcaact 16078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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