View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1144_low_15 (Length: 477)

Name: NF1144_low_15
Description: NF1144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1144_low_15
NF1144_low_15
[»] chr4 (63 HSPs)
chr4 (39-451)||(39932536-39932948)
chr4 (211-362)||(52274074-52274225)
chr4 (237-366)||(488364-488493)
chr4 (237-361)||(36740886-36741010)
chr4 (256-341)||(4603331-4603415)
chr4 (256-361)||(28074347-28074451)
chr4 (237-338)||(29877644-29877745)
chr4 (256-364)||(22397304-22397412)
chr4 (256-364)||(48591423-48591531)
chr4 (303-363)||(54412093-54412153)
chr4 (256-363)||(7148752-7148859)
chr4 (256-339)||(46175978-46176060)
chr4 (256-339)||(47202830-47202912)
chr4 (261-341)||(212952-213031)
chr4 (260-339)||(896974-897053)
chr4 (237-339)||(15184551-15184652)
chr4 (237-339)||(19725297-19725399)
chr4 (256-338)||(22303101-22303182)
chr4 (237-339)||(23335646-23335748)
chr4 (237-366)||(55638061-55638190)
chr4 (265-338)||(26206362-26206435)
chr4 (261-341)||(43415293-43415373)
chr4 (237-341)||(46704250-46704353)
chr4 (256-339)||(2141645-2141728)
chr4 (237-320)||(41228926-41229009)
chr4 (257-328)||(45018548-45018619)
chr4 (256-338)||(18424277-18424358)
chr4 (255-341)||(27368150-27368236)
chr4 (237-339)||(38345802-38345903)
chr4 (276-341)||(22117356-22117420)
chr4 (224-339)||(23297442-23297554)
chr4 (258-339)||(35124391-35124472)
chr4 (256-320)||(17222852-17222916)
chr4 (307-363)||(28663408-28663464)
chr4 (303-341)||(19298180-19298218)
chr4 (261-339)||(42617234-42617311)
chr4 (237-339)||(12495624-12495728)
chr4 (270-339)||(23284789-23284857)
chr4 (313-362)||(34633503-34633552)
chr4 (260-341)||(52700547-52700628)
chr4 (187-243)||(7673420-7673476)
chr4 (257-341)||(8057088-8057172)
chr4 (256-296)||(39931543-39931583)
chr4 (256-356)||(43983381-43983481)
chr4 (256-339)||(2548046-2548129)
chr4 (256-315)||(2702714-2702773)
chr4 (280-339)||(15179822-15179880)
chr4 (186-241)||(34526246-34526301)
chr4 (259-341)||(42611870-42611952)
chr4 (313-363)||(825795-825845)
chr4 (260-338)||(2494403-2494481)
chr4 (277-339)||(3564224-3564286)
chr4 (261-339)||(7206590-7206668)
chr4 (303-341)||(9201653-9201691)
chr4 (258-332)||(35010222-35010296)
chr4 (187-240)||(3564329-3564382)
chr4 (302-339)||(19414133-19414170)
chr4 (190-243)||(30956804-30956857)
chr4 (184-241)||(36741026-36741083)
chr4 (239-341)||(43699463-43699567)
chr4 (256-339)||(948076-948160)
chr4 (256-332)||(10794909-10794984)
chr4 (237-293)||(22273830-22273886)
[»] chr5 (69 HSPs)
chr5 (256-372)||(28625451-28625567)
chr5 (256-362)||(41534604-41534710)
chr5 (256-341)||(15122547-15122631)
chr5 (237-341)||(12986994-12987098)
chr5 (238-362)||(28357333-28357457)
chr5 (256-363)||(40696981-40697093)
chr5 (237-341)||(43319005-43319109)
chr5 (256-372)||(42706767-42706885)
chr5 (237-338)||(12467269-12467371)
chr5 (237-363)||(17657222-17657348)
chr5 (256-341)||(1473358-1473443)
chr5 (237-341)||(23087759-23087861)
chr5 (256-341)||(40415971-40416056)
chr5 (237-341)||(13060582-13060686)
chr5 (256-339)||(29418751-29418834)
chr5 (237-339)||(29659066-29659166)
chr5 (260-339)||(33757092-33757170)
chr5 (237-362)||(41419485-41419607)
chr5 (256-338)||(26003002-26003084)
chr5 (243-361)||(38461268-38461386)
chr5 (247-341)||(39990578-39990672)
chr5 (238-339)||(1576635-1576735)
chr5 (238-339)||(1608080-1608180)
chr5 (256-361)||(1868828-1868933)
chr5 (270-363)||(1942990-1943083)
chr5 (258-339)||(5203435-5203515)
chr5 (307-356)||(6125274-6125323)
chr5 (274-339)||(10537236-10537301)
chr5 (237-338)||(29922169-29922270)
chr5 (191-243)||(589273-589325)
chr5 (188-240)||(2670182-2670234)
chr5 (237-336)||(7364289-7364388)
chr5 (256-339)||(15413996-15414079)
chr5 (259-338)||(16722032-16722110)
chr5 (276-338)||(780587-780648)
chr5 (265-339)||(4728850-4728923)
chr5 (256-338)||(6025984-6026065)
chr5 (256-363)||(31637093-31637196)
chr5 (237-363)||(41059769-41059895)
chr5 (237-339)||(42852026-42852127)
chr5 (267-363)||(3977457-3977551)
chr5 (237-362)||(6144719-6144844)
chr5 (305-341)||(6008327-6008363)
chr5 (256-332)||(40152875-40152951)
chr5 (183-235)||(42095332-42095384)
chr5 (258-341)||(341992-342075)
chr5 (186-241)||(3520416-3520471)
chr5 (276-339)||(20458577-20458639)
chr5 (270-341)||(22573655-22573726)
chr5 (260-339)||(33667396-33667474)
chr5 (256-361)||(35536823-35536932)
chr5 (256-363)||(40452477-40452584)
chr5 (307-357)||(10274260-10274310)
chr5 (280-341)||(2531328-2531388)
chr5 (276-341)||(15709911-15709975)
chr5 (276-341)||(17668402-17668466)
chr5 (274-339)||(24030219-24030284)
chr5 (334-367)||(33924687-33924720)
chr5 (270-339)||(43268634-43268703)
chr5 (211-243)||(589140-589172)
chr5 (239-339)||(2878659-2878758)
chr5 (237-341)||(7984107-7984211)
chr5 (237-337)||(11912082-11912182)
chr5 (199-243)||(16722006-16722050)
chr5 (210-242)||(19840149-19840181)
chr5 (187-243)||(26002964-26003020)
chr5 (256-320)||(28357164-28357228)
chr5 (313-369)||(28357254-28357310)
chr5 (188-241)||(29136735-29136790)
[»] chr7 (46 HSPs)
chr7 (256-362)||(47511024-47511130)
chr7 (256-362)||(29378626-29378732)
chr7 (256-341)||(16932929-16933013)
chr7 (256-341)||(16938312-16938396)
chr7 (237-341)||(22032764-22032868)
chr7 (237-363)||(14691279-14691405)
chr7 (237-339)||(44613453-44613555)
chr7 (256-341)||(16958818-16958902)
chr7 (256-339)||(22575590-22575673)
chr7 (256-341)||(14675959-14676043)
chr7 (256-338)||(20888578-20888661)
chr7 (258-339)||(28004588-28004668)
chr7 (256-341)||(29390550-29390634)
chr7 (256-341)||(43391723-43391808)
chr7 (259-339)||(991504-991583)
chr7 (211-339)||(21027467-21027595)
chr7 (237-341)||(23137143-23137246)
chr7 (256-339)||(35809094-35809177)
chr7 (256-341)||(35246674-35246756)
chr7 (256-341)||(41677376-41677462)
chr7 (238-339)||(19308472-19308573)
chr7 (188-241)||(38038186-38038239)
chr7 (261-341)||(14536885-14536964)
chr7 (186-337)||(23119849-23120000)
chr7 (186-241)||(29390460-29390515)
chr7 (237-316)||(47654394-47654473)
chr7 (263-341)||(19913947-19914025)
chr7 (256-338)||(22319290-22319372)
chr7 (304-362)||(46743931-46743989)
chr7 (261-338)||(48949725-48949802)
chr7 (260-341)||(30181552-30181633)
chr7 (276-341)||(34922933-34922998)
chr7 (187-243)||(44799371-44799427)
chr7 (237-319)||(43818858-43818941)
chr7 (276-339)||(14593152-14593217)
chr7 (315-361)||(29778433-29778479)
chr7 (307-357)||(33288149-33288199)
chr7 (256-341)||(2194041-2194128)
chr7 (256-320)||(9024787-9024852)
chr7 (270-339)||(24371420-24371488)
chr7 (261-338)||(44799409-44799484)
chr7 (237-338)||(48021628-48021728)
chr7 (307-363)||(1054118-1054174)
chr7 (241-341)||(23356475-23356575)
chr7 (314-362)||(35713564-35713612)
chr7 (307-351)||(41094139-41094183)
[»] chr6 (46 HSPs)
chr6 (256-363)||(2034228-2034335)
chr6 (256-339)||(29052337-29052420)
chr6 (256-339)||(32615414-32615496)
chr6 (257-363)||(21025227-21025333)
chr6 (237-341)||(32675869-32675973)
chr6 (256-339)||(10184329-10184411)
chr6 (264-341)||(6632661-6632738)
chr6 (263-339)||(1468180-1468254)
chr6 (256-340)||(2255737-2255821)
chr6 (265-341)||(29623485-29623561)
chr6 (256-339)||(7267779-7267862)
chr6 (256-363)||(32165260-32165366)
chr6 (257-339)||(4808576-4808657)
chr6 (238-339)||(10054385-10054484)
chr6 (261-338)||(16589756-16589833)
chr6 (261-338)||(16605547-16605624)
chr6 (256-321)||(34413341-34413406)
chr6 (257-337)||(24625857-24625937)
chr6 (240-339)||(6776812-6776911)
chr6 (276-339)||(9894770-9894833)
chr6 (276-339)||(17914950-17915012)
chr6 (237-363)||(2027156-2027282)
chr6 (303-341)||(9582502-9582540)
chr6 (258-316)||(10619254-10619312)
chr6 (276-362)||(10755299-10755385)
chr6 (187-241)||(21025129-21025183)
chr6 (237-339)||(34801030-34801131)
chr6 (256-341)||(34223524-34223609)
chr6 (232-339)||(1240585-1240693)
chr6 (237-341)||(6758629-6758733)
chr6 (256-339)||(10873990-10874071)
chr6 (187-243)||(21871194-21871250)
chr6 (186-241)||(12816810-12816865)
chr6 (256-339)||(21610048-21610131)
chr6 (256-339)||(21891337-21891420)
chr6 (323-362)||(24419524-24419563)
chr6 (256-338)||(4272387-4272469)
chr6 (256-366)||(7576860-7576970)
chr6 (277-339)||(30533984-30534046)
chr6 (268-338)||(10730252-10730318)
chr6 (188-241)||(10755194-10755247)
chr6 (313-362)||(10874097-10874146)
chr6 (304-341)||(17300785-17300822)
chr6 (256-316)||(15054584-15054644)
chr6 (237-341)||(23239249-23239353)
chr6 (298-338)||(28758362-28758402)
[»] chr3 (53 HSPs)
chr3 (256-361)||(43079933-43080038)
chr3 (237-341)||(53218020-53218124)
chr3 (256-363)||(48597866-48597973)
chr3 (235-362)||(52021227-52021355)
chr3 (256-363)||(45331294-45331401)
chr3 (237-341)||(1516078-1516181)
chr3 (255-339)||(2086689-2086773)
chr3 (256-341)||(4257299-4257385)
chr3 (265-337)||(30473151-30473223)
chr3 (256-339)||(29614198-29614280)
chr3 (256-363)||(52421140-52421246)
chr3 (47-113)||(30243383-30243449)
chr3 (264-341)||(10448776-10448853)
chr3 (256-332)||(37456433-37456508)
chr3 (265-361)||(37601035-37601131)
chr3 (256-339)||(3645307-3645389)
chr3 (256-339)||(40240576-40240659)
chr3 (256-339)||(51409397-51409480)
chr3 (256-338)||(585025-585107)
chr3 (237-339)||(28741194-28741296)
chr3 (256-362)||(38524069-38524175)
chr3 (289-338)||(36266249-36266298)
chr3 (276-341)||(40581096-40581161)
chr3 (257-339)||(4974315-4974397)
chr3 (256-341)||(24842106-24842191)
chr3 (280-338)||(29830793-29830851)
chr3 (276-338)||(30917513-30917575)
chr3 (232-341)||(10667400-10667509)
chr3 (115-176)||(30243592-30243653)
chr3 (256-341)||(34707712-34707797)
chr3 (237-361)||(3870206-3870330)
chr3 (256-339)||(22809192-22809276)
chr3 (322-366)||(35480447-35480491)
chr3 (256-339)||(20894507-20894589)
chr3 (186-241)||(29002836-29002891)
chr3 (303-338)||(30499971-30500006)
chr3 (237-316)||(37243493-37243572)
chr3 (237-320)||(37778157-37778239)
chr3 (237-332)||(43971827-43971922)
chr3 (268-363)||(45049385-45049480)
chr3 (261-335)||(10521162-10521236)
chr3 (303-341)||(28623280-28623318)
chr3 (256-341)||(11528893-11528978)
chr3 (289-338)||(17383510-17383559)
chr3 (210-243)||(20894622-20894655)
chr3 (313-362)||(29270463-29270512)
chr3 (270-339)||(51662808-51662877)
chr3 (261-341)||(7292682-7292762)
chr3 (256-316)||(20174939-20174999)
chr3 (239-291)||(20685837-20685889)
chr3 (256-316)||(30383795-30383855)
chr3 (237-341)||(32901128-32901232)
chr3 (270-338)||(41601344-41601412)
[»] chr8 (49 HSPs)
chr8 (239-339)||(42363299-42363398)
chr8 (257-339)||(38895663-38895745)
chr8 (262-363)||(28879038-28879139)
chr8 (237-337)||(12607086-12607185)
chr8 (256-339)||(19925561-19925644)
chr8 (259-361)||(2669630-2669732)
chr8 (237-339)||(32975691-32975793)
chr8 (256-362)||(34286563-34286668)
chr8 (237-338)||(2563363-2563464)
chr8 (237-341)||(19327869-19327972)
chr8 (256-339)||(42102111-42102193)
chr8 (256-338)||(218253-218333)
chr8 (256-338)||(694813-694893)
chr8 (256-338)||(699022-699102)
chr8 (256-338)||(731876-731956)
chr8 (256-338)||(855772-855852)
chr8 (237-363)||(10298906-10299032)
chr8 (256-338)||(11988202-11988283)
chr8 (256-341)||(35168440-35168526)
chr8 (265-361)||(35453392-35453488)
chr8 (278-357)||(32213043-32213122)
chr8 (264-362)||(28280690-28280788)
chr8 (237-339)||(32131444-32131546)
chr8 (256-338)||(37410912-37410993)
chr8 (237-362)||(8752787-8752912)
chr8 (256-341)||(14942426-14942511)
chr8 (256-317)||(24866950-24867011)
chr8 (256-341)||(38195489-38195573)
chr8 (256-339)||(14262330-14262413)
chr8 (237-363)||(41145376-41145504)
chr8 (256-338)||(19925388-19925469)
chr8 (261-339)||(38338855-38338932)
chr8 (268-338)||(43577226-43577296)
chr8 (301-362)||(9781196-9781257)
chr8 (256-364)||(1184762-1184870)
chr8 (276-332)||(3641231-3641287)
chr8 (256-316)||(9782210-9782270)
chr8 (267-351)||(14724975-14725058)
chr8 (256-335)||(16972355-16972435)
chr8 (303-338)||(3664141-3664176)
chr8 (276-339)||(29243083-29243145)
chr8 (256-339)||(32924211-32924294)
chr8 (313-363)||(9130940-9130990)
chr8 (187-241)||(13131565-13131619)
chr8 (187-241)||(28879177-28879231)
chr8 (312-361)||(10213707-10213756)
chr8 (210-243)||(41145329-41145362)
chr8 (187-243)||(13265611-13265666)
chr8 (256-316)||(30974016-30974076)
[»] chr2 (49 HSPs)
chr2 (238-362)||(12223833-12223957)
chr2 (237-362)||(4004800-4004925)
chr2 (237-339)||(4026930-4027031)
chr2 (237-339)||(11776988-11777090)
chr2 (237-341)||(29774747-29774851)
chr2 (256-339)||(21788461-21788544)
chr2 (237-339)||(25836692-25836794)
chr2 (243-341)||(33321298-33321396)
chr2 (256-338)||(43787802-43787884)
chr2 (256-363)||(12238485-12238589)
chr2 (260-341)||(32366152-32366232)
chr2 (237-341)||(15155815-15155919)
chr2 (256-339)||(32522045-32522127)
chr2 (268-339)||(34913401-34913472)
chr2 (265-339)||(27881005-27881079)
chr2 (270-364)||(43796909-43797003)
chr2 (256-313)||(16108121-16108178)
chr2 (276-341)||(22898376-22898440)
chr2 (256-332)||(24007804-24007880)
chr2 (237-316)||(735991-736070)
chr2 (256-339)||(4090493-4090576)
chr2 (240-341)||(755724-755826)
chr2 (256-362)||(887393-887499)
chr2 (237-339)||(2401602-2401703)
chr2 (313-363)||(9140653-9140703)
chr2 (258-339)||(10574162-10574243)
chr2 (237-339)||(38471771-38471873)
chr2 (237-338)||(22422149-22422249)
chr2 (256-337)||(24439025-24439106)
chr2 (256-339)||(2790069-2790153)
chr2 (186-285)||(13097976-13098080)
chr2 (187-243)||(17797330-17797386)
chr2 (256-320)||(36501514-36501578)
chr2 (237-341)||(7480879-7480986)
chr2 (256-363)||(8342999-8343105)
chr2 (280-339)||(8441477-8441536)
chr2 (278-341)||(17546393-17546456)
chr2 (274-341)||(33321420-33321487)
chr2 (310-361)||(37419899-37419950)
chr2 (280-339)||(40301356-40301414)
chr2 (279-346)||(41554602-41554669)
chr2 (187-241)||(8832579-8832633)
chr2 (274-339)||(2757088-2757151)
chr2 (210-243)||(7480832-7480865)
chr2 (278-339)||(17531953-17532013)
chr2 (186-243)||(26440058-26440114)
chr2 (237-339)||(38216027-38216125)
chr2 (187-243)||(2757132-2757188)
chr2 (323-363)||(17317159-17317199)
[»] chr1 (65 HSPs)
chr1 (237-357)||(6337736-6337856)
chr1 (237-361)||(48819281-48819405)
chr1 (237-363)||(1005320-1005446)
chr1 (237-341)||(13412433-13412536)
chr1 (256-339)||(3116061-3116143)
chr1 (256-339)||(32497271-32497353)
chr1 (256-362)||(45267446-45267553)
chr1 (237-335)||(4068123-4068221)
chr1 (237-362)||(16888946-16889070)
chr1 (256-357)||(31378750-31378851)
chr1 (256-332)||(19220185-19220260)
chr1 (242-339)||(28690006-28690105)
chr1 (256-339)||(5243403-5243485)
chr1 (237-320)||(9572764-9572847)
chr1 (237-352)||(15515327-15515442)
chr1 (256-339)||(17628424-17628506)
chr1 (256-363)||(37329411-37329518)
chr1 (256-339)||(51162273-51162356)
chr1 (237-339)||(22593387-22593489)
chr1 (237-339)||(35282574-35282676)
chr1 (261-339)||(36422985-36423063)
chr1 (256-341)||(15631906-15631991)
chr1 (256-320)||(26946103-26946167)
chr1 (256-363)||(26988123-26988235)
chr1 (261-336)||(13038954-13039029)
chr1 (256-339)||(25485752-25485835)
chr1 (236-342)||(41003388-41003494)
chr1 (237-339)||(3069834-3069936)
chr1 (276-341)||(5347157-5347221)
chr1 (237-338)||(16225514-16225613)
chr1 (256-341)||(26542975-26543060)
chr1 (256-341)||(35590132-35590217)
chr1 (256-341)||(49971253-49971338)
chr1 (259-339)||(26435177-26435256)
chr1 (258-338)||(37712073-37712152)
chr1 (259-341)||(10082252-10082335)
chr1 (256-339)||(15791388-15791470)
chr1 (256-339)||(16708803-16708886)
chr1 (276-339)||(17814195-17814257)
chr1 (256-339)||(20169268-20169351)
chr1 (188-239)||(26435086-26435137)
chr1 (265-332)||(34265580-34265647)
chr1 (187-241)||(46500910-46500964)
chr1 (256-341)||(12256609-12256693)
chr1 (306-363)||(28870204-28870261)
chr1 (256-333)||(29333427-29333504)
chr1 (277-362)||(31345872-31345957)
chr1 (243-320)||(41196696-41196773)
chr1 (186-238)||(26988273-26988325)
chr1 (256-339)||(18327528-18327611)
chr1 (276-339)||(37148112-37148175)
chr1 (276-339)||(37156937-37157000)
chr1 (266-337)||(39941516-39941587)
chr1 (261-332)||(46473105-46473176)
chr1 (237-291)||(14461021-14461075)
chr1 (277-339)||(22103115-22103176)
chr1 (256-339)||(35275897-35275981)
chr1 (199-245)||(42367068-42367114)
chr1 (259-313)||(42591412-42591466)
chr1 (256-341)||(46263399-46263485)
chr1 (187-240)||(9575451-9575504)
chr1 (277-338)||(10365176-10365237)
chr1 (186-241)||(1321660-1321716)
chr1 (263-339)||(15235167-15235242)
chr1 (323-363)||(36178516-36178556)
[»] scaffold0006 (2 HSPs)
scaffold0006 (237-341)||(278972-279075)
scaffold0006 (303-341)||(40723-40760)
[»] scaffold1367 (1 HSPs)
scaffold1367 (237-341)||(1060-1164)
[»] scaffold0012 (1 HSPs)
scaffold0012 (256-341)||(178502-178588)
[»] scaffold1088 (1 HSPs)
scaffold1088 (256-341)||(1296-1381)
[»] scaffold0332 (1 HSPs)
scaffold0332 (237-351)||(14726-14840)
[»] scaffold0004 (2 HSPs)
scaffold0004 (256-361)||(227688-227794)
scaffold0004 (210-243)||(242702-242735)
[»] scaffold0299 (1 HSPs)
scaffold0299 (237-341)||(11280-11384)
[»] scaffold0157 (1 HSPs)
scaffold0157 (237-339)||(24749-24853)
[»] scaffold0048 (3 HSPs)
scaffold0048 (187-239)||(58778-58830)
scaffold0048 (237-332)||(58848-58943)
scaffold0048 (260-339)||(59272-59350)
[»] scaffold0027 (1 HSPs)
scaffold0027 (260-339)||(142343-142422)
[»] scaffold0022 (1 HSPs)
scaffold0022 (326-361)||(89322-89357)
[»] scaffold0100 (1 HSPs)
scaffold0100 (211-243)||(38515-38547)
[»] scaffold0041 (1 HSPs)
scaffold0041 (307-351)||(109113-109157)


Alignment Details
Target: chr4 (Bit Score: 393; Significance: 0; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 39 - 451
Target Start/End: Original strand, 39932536 - 39932948
Alignment:
Q  39 agttatagcccaattgcaaccttgtacctcatagaccaagggagtgtcgaactaccattcccaccgttcttcctcacaaaaacataccctcctcggggtc 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39932536 agttatagcccaattgcaaccttgtacctcatagaccaagggagtgttgaactaccattcccaccgttcttcctcacaaaaacataccctcctcggggtc 39932635  T
Q  139 aatacaaaaagcaacaaatggaacaacatttgcactatatatggacttgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39932636 aatacaaaaagcaacaaatggaacaacatttgcactatatatggacttgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaat 39932735  T
Q  239 aagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  39932736 aagttctcactaatagaaattgtatcttcataaattgttttttcatacactaccttaacaatcttataaataatacataaaagtttatttatttgcataa 39932835  T
Q  339 gtttaaaaataagtcaatccaaacgagctctatgaagagaactagcaatcatcaacttcaactccctagcacgagattcactaacccaattacctaatgc 438  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39932836 gtttaaaaataagtcaatcgaaacgagctctatgaagagaactagcaatcatcaacttcaactccctagcacgagattcactaacccaattacctaatgc 39932935  T
Q  439 agtattaagcaag 451  Q
    |||||||||||||    
T  39932936 agtattaagcaag 39932948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 362
Target Start/End: Original strand, 52274074 - 52274225
Alignment:
Q  211 ttataaaaaatagtttatgcaaataaataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaata 310  Q
    |||| |||||||| ||||||| ||||||||||||||||| |    ||||||||||||||||  ||||||||| || |||||||| | || | ||| ||||    
T  52274074 ttatgaaaaatagcttatgcatataaataagttctcactgacgaaaattgtatcttcataagctgttttttcgtaaactaccttgataagcttatcaata 52274173  T
Q  311 atacataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||| |||||    
T  52274174 atacataaaagtttatttatttgcataagctcaaaaataagccaattcaaac 52274225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 237 - 366
Target Start/End: Original strand, 488364 - 488493
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||||  ||||||||||| | ||    |||||||||| |||||||| |||| | ||| ||||||||||||||  ||| ||||||||||    
T  488364 ataagttctcactaataaaaattgtatctttacaagcaattttttcataaactaccttgacaagcttattaataatacataaaagcttacttatttgcat 488463  T
Q  337 aagtttaaaaataagtcaatccaaacgagc 366  Q
    ||| | ||||||||||||||||||| ||||    
T  488464 aagctcaaaaataagtcaatccaaatgagc 488493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 361
Target Start/End: Complemental strand, 36741010 - 36740886
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||||   |||||||||||||| || ||| |||||||| ||||| || |||| | |||  |||||| ||||||  ||||||||||||||    
T  36741010 ataagttctcactaatgaaaattgtatcttcatgaactgtattttcataaactactttgacaagcttatgcataatatataaaagcttatttatttgcat 36740911  T
Q  337 aagtttaaaaataagtcaatccaaa 361  Q
    ||| | |||||||||||||||||||    
T  36740910 aagctcaaaaataagtcaatccaaa 36740886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 4603331 - 4603415
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||   ||||||||||||||||||  |||||||||||||||||||    
T  4603331 aattgtatcttcataaactgttttttcataaactaccttaa-aaaattataaataatacataaaaacttatttatttgcataagtt 4603415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 28074451 - 28074347
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  | |||||||||| |||||||| |||| | ||| ||||||||||||||  |||||||||||||||||   |||||||||||||    
T  28074451 aattgtatcttcataagct-ttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataagcgaaaaaataagtcaa 28074353  T
Q  356 tccaaa 361  Q
    ||||||    
T  28074352 tccaaa 28074347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 29877745 - 29877644
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||| |  ||||||||||||||||  || ||||||||| ||||||||| ||| | ||| ||||||||||||||  ||||||||||||||    
T  29877745 ataagttctcactaacaaaaattgtatcttcataagctgctttttcataaactaccttagcaagcttatgaataatacataaaagcttatttatttgcat 29877646  T
Q  337 aa 338  Q
    ||    
T  29877645 aa 29877644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 364
Target Start/End: Original strand, 22397304 - 22397412
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||  | |||||||||||||| ||  |||||||||||| ||||| |  ||||||| ||||    
T  22397304 aattgtatattcataagttgttttttcataaactaccttaacagacttataaataatacattaatatttatttatttgtataagctctaaaataaatcaa 22397403  T
Q  356 tccaaacga 364  Q
    | |||||||    
T  22397404 ttcaaacga 22397412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 364
Target Start/End: Original strand, 48591423 - 48591531
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  |||||||||||| |||||||| |||| | ||| ||||||| ||||||  ||||||||||||||||| | | ||||||| |||    
T  48591423 aattgtatcttcataagctgttttttcataaactaccttgacaagcgtatgaataatatataaaaacttatttatttgcataagctcagaaataagccaa 48591522  T
Q  356 tccaaacga 364  Q
    ||| |||||    
T  48591523 tcctaacga 48591531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 54412093 - 54412153
Alignment:
Q  303 tataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  54412093 tataaataatacataaaaatttatttatttgcataagttaaaaaataagccaatccaaacg 54412153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 363
Target Start/End: Complemental strand, 7148859 - 7148752
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||||||| || ||||  |||||||||| | |||||||| |||| | ||| ||||||||||||||  ||||||||||||||||| | ||||||||| |||    
T  7148859 aattgtatttttataagctgttttttcaaaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataagctcaaaaataagccaa 7148760  T
Q  356 tccaaacg 363  Q
    ||||||||    
T  7148759 tccaaacg 7148752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 46175978 - 46176060
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||  ||||||||||||||||||  |||||||||||||||||    
T  46175978 aattgtatcttcataaactattttttcataaactaccttaaaaat-ttataaataatacataaaaacttatttatttgcataag 46176060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 47202912 - 47202830
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||  ||||| ||||||||||||  |||||||||||||||||    
T  47202912 aattgtatcttcataaatggttttttcataaactaccttaaaaat-ttataagtaatacataaaaacttatttatttgcataag 47202830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 341
Target Start/End: Original strand, 212952 - 213031
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||| ||||||||||||| ||||||||||||| | ||| ||||||| ||||||  |||||||||||||||||||    
T  212952 tatcttcataagttgttttttcataaactaccttaacaagcttatgaataataaataaaa-cttatttatttgcataagtt 213031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 897053 - 896974
Alignment:
Q  260 gtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||| | ||||||||||||||||| ||||| || |||| | ||| |||||||||||||| ||||||||||||||||||    
T  897053 gtatctacgtaaattgttttttcataaactacattgacaagcttatgaataatacataaaagtttatttatttgcataag 896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 15184652 - 15184551
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||||||||||||||||| |||||||||||| ||||| |||| ||   ||||||||||||||||||  |||||||||| |||    
T  15184652 ataagttctcactaacgaaaattgtatcttcataaactgttttttcataaactactttaa-aaaattataaataatacataaaaacttatttatttacat 15184554  T
Q  337 aag 339  Q
    |||    
T  15184553 aag 15184551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 19725399 - 19725297
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||| ||||||||||   |||| |||||||||| | |||||||||||| | ||||||||||| | ||||||||||||||||||   |||||| ||||||    
T  19725399 ataagctctcactaatgaaaattatatcttcatagactgttttttcataaaataccttaacaaacttataaataatacataaaaacgtatttaattgcat 19725300  T
Q  337 aag 339  Q
    |||    
T  19725299 aag 19725297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 22303182 - 22303101
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||| ||||||||||| ||||| | || |||  ||||||||||||||||||  ||||||||||||||||    
T  22303182 aattgtatcttcataaatggttttttcataaactacgtaaaaaatt-tataaataatacataaaaacttatttatttgcataa 22303101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 23335748 - 23335646
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||| ||   ||||||||||||||||  |||||||||||| |||||||| | |  | ||| ||||||||||||||| | ||||||||||||    
T  23335748 ataagttctcacttatgaaaattgtatcttcataagctgttttttcataaactaccttgatatgcttatgaataatacataaaatctcatttatttgcat 23335649  T
Q  337 aag 339  Q
    |||    
T  23335648 aag 23335646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 366
Target Start/End: Original strand, 55638061 - 55638190
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||  |  |||||||||| ||||| |||||||||||| ||||  || |||| | ||| ||||||||||||||  || |||||||||||    
T  55638061 ataagttctcactaacggagattgtatctttataaactgttttttcataaactatatttacaaacttatgaataatacataaaagcttgtttatttgcat 55638160  T
Q  337 aagtttaaaaataagtc-aatccaaacgagc 366  Q
    ||  || |||||||||| |||||||||||||    
T  55638161 aaactt-aaaataagtctaatccaaacgagc 55638190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 338
Target Start/End: Original strand, 26206362 - 26206435
Alignment:
Q  265 ttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||| |||||||||||| ||||| ||||||||| |||||||||||||||||    |||||||||||||||    
T  26206362 ttcataaactgttttttcataaactacgttaacaatcttataaataatacataaagacatatttatttgcataa 26206435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 341
Target Start/End: Original strand, 43415293 - 43415373
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||| ||||||||||||||| || ||||| ||||||| | ||| ||||||||||||||  ||||||||||||| |||||    
T  43415293 tatcttgataaattgttttttcgtaaactacattaacaaccttatgaataatacataaaaacttatttatttgcagaagtt 43415373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 46704250 - 46704353
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||||   |||| |||||||||||  |||||||||||| ||||||||||||| |  || ||||||| ||||||  ||| ||||||||||    
T  46704250 ataagttctcactaatgaaaattttatcttcataagctgttttttcataaactaccttaacaagctcatgaataataaataaaagctta-ttatttgcat 46704348  T
Q  337 aagtt 341  Q
    |||||    
T  46704349 aagtt 46704353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 2141728 - 2141645
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||||| |||||||| |||   |||||||||||   ||||||||| ||||||||  |||||||||||||||||    
T  2141728 aattgtatcttcataaactgtttttttataatataccttaacaaagttataaataacacataaaagcttatttatttgcataag 2141645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 320
Target Start/End: Complemental strand, 41229009 - 41228926
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa 320  Q
    ||||||||| ||||||   |||||||||||||| | ||||||||||||| ||||||||||||| | ||| ||||||| ||||||    
T  41229009 ataagttctaactaatgaaaattgtatcttcatcagttgttttttcataaactaccttaacaagcttatgaataataaataaaa 41228926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 45018619 - 45018548
Alignment:
Q  257 attgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttattt 328  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||  || ||||||| ||||||| ||||||    
T  45018619 attgtatcttcataagttgttttttcataaactactttaacaatctcatgaataataaataaaatcttattt 45018548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 18424277 - 18424358
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||   ||| ||||||||||||||  ||||||||||| ||||    
T  18424277 aattgtatcttcataaattgttttt-cataaactaccttcacaagtttatgaataatacataaaagcttatttatttgtataa 18424358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 255 - 341
Target Start/End: Original strand, 27368150 - 27368236
Alignment:
Q  255 taattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||| ||||| ||||||||||||  |||| || |||| | ||| ||||||| ||||||  |||||||||||||||||||    
T  27368150 taattgtatctttataaactgttttttcataagctacattgacaaacttatgaataatatataaaagcttatttatttgcataagtt 27368236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 38345802 - 38345903
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||  ||||||  |||||||||||||||| ||||||||||||| ||||| || |||| | ||| |||| |||||||||  ||||||||||| ||    
T  38345802 ataagttctggctaataaaaattgtatcttcataagttgttttttcataaactactttgacaa-cttatgaatactacataaaagcttatttatttggat 38345900  T
Q  337 aag 339  Q
    |||    
T  38345901 aag 38345903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 22117420 - 22117356
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||| |||||||||| || | |||||||||||||||||| | ||||||||||||||||||    
T  22117420 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataagtt 22117356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 339
Target Start/End: Complemental strand, 23297554 - 23297442
Alignment:
Q  224 tttatgcaaataaataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattt 323  Q
    ||||||| |||  |||||||||| |||| |  ||||||||||||||||  |||||   |||| |||||||| |||| | ||| ||||||||||||||  |    
T  23297554 tttatgctaattcataagttctcgctaacaaaaattgtatcttcataagctgttt---cataaactaccttgacaaacttatgaataatacataaaagct 23297458  T
Q  324 tatttatttgcataag 339  Q
    ||||||||||||||||    
T  23297457 tatttatttgcataag 23297442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 35124472 - 35124391
Alignment:
Q  258 ttgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||  |||||||||||| |||||||| |||| | ||| |||| |||||||||  |||| ||||||||||||    
T  35124472 ttgtatcttcataagctgttttttcataaactaccttgacaagcttatgaatagtacataaaaggttatatatttgcataag 35124391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 17222916 - 17222852
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa 320  Q
    ||||||||||||||||  |||||||||||| |||||||| |||| | ||| ||||||||||||||    
T  17222916 aattgtatcttcataatctgttttttcataaactaccttgacaagcttatgaataatacataaaa 17222852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 28663464 - 28663408
Alignment:
Q  307 aataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    ||||||||||||||  | ||||||||||||||| | |||||||||||||||||||||    
T  28663464 aataatacataaaagctcatttatttgcataagctcaaaaataagtcaatccaaacg 28663408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 19298180 - 19298218
Alignment:
Q  303 tataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  19298180 tataaataatacataaaaatttatttatttgcataagtt 19298218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 42617234 - 42617311
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||| | |||||||||| |||||||||| || | |||||||||||| |||||   ||||||||||||||||    
T  42617234 tatcttcataaactattttttcataaactaccttaa-aaacttataaataatacttaaaaacgtatttatttgcataag 42617311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 12495624 - 12495728
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactacctta--acaatcctataaataatacataaaattttatttatttgc 334  Q
    ||||||||||||||||    |||||||||| || |  |||||||||||| ||||||||   |||| | ||| ||||||||||||||  ||||||||||||    
T  12495624 ataagttctcactaatgaatattgtatcttgattagctgttttttcataaactaccttttgacaagcttatgaataatacataaaagcttatttatttgc 12495723  T
Q  335 ataag 339  Q
    |||||    
T  12495724 ataag 12495728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 23284789 - 23284857
Alignment:
Q  270 aaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||| | |||||| | ||||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  23284789 aaattgtatcttcataaaataccttaacaaacttataaataatacataaaa-tttatttatttgtataag 23284857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 34633503 - 34633552
Alignment:
Q  313 acataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    ||||||||  |||||||||||| |||| ||||||||||||||||||||||    
T  34633503 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 34633552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 52700547 - 52700628
Alignment:
Q  260 gtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||| | |||||||||| || || || |||| | |||||||||||||||||   |||||||||| ||||||||    
T  52700547 gtatcttcataaactattttttcataaaccacttttacaagcttataaataatacataaagacttatttatttacataagtt 52700628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 7673420 - 7673476
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    |||||||||  ||||||||  | ||||||||||| ||||||||||||||||||||||    
T  7673420 gtttggattagtttattttagagcttataaaaaacagtttatgcaaataaataagtt 7673476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 8057088 - 8057172
Alignment:
Q  257 attgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||| |||||||| ||  ||||||| |||| | ||| ||||||| ||||||  |||||| ||||||| ||||    
T  8057088 attgtatcttcataaatcgttttttcttaagctaccttgacaagcttatgaataataaataaaaacttatttttttgcattagtt 8057172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 39931543 - 39931583
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaa 296  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  39931543 aattgtatcttcataaatggttttttcataaactaccttaa 39931583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 356
Target Start/End: Original strand, 43983381 - 43983481
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||||||| || |||| ||||||||| ||| |||| |||||||| | |||||||||||||| ||   ||||||||||| ||||| |  |||||||| |||    
T  43983381 aattgtatgtttataagttgtttttttataaactatcttaacaagcttataaataatacattaatgcttatttatttgtataagctctaaaataagccaa 43983480  T
Q  356 t 356  Q
    |    
T  43983481 t 43983481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 2548046 - 2548129
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||| ||||||||||||||||||||||||| |||| ||||| |  |  || ||||| | ||||||  |||||||||||||||||    
T  2548046 aattttatcttcataaattgttttttcataaactaacttaataggctcatgaataacaaataaaaacttatttatttgcataag 2548129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 2702714 - 2702773
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataataca 315  Q
    |||||||| ||||||| |||| |||||||  ||||||||||||| | |||||||||||||    
T  2702714 aattgtatattcataagttgtcttttcattaactaccttaacaaacttataaataataca 2702773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 15179880 - 15179822
Alignment:
Q  280 ttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||| |||||||||| || | |||||||||||||||||| | ||||||||||||||||    
T  15179880 ttcataaactaccttaaaaa-cttataaataatacataaaaatatatttatttgcataag 15179822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 34526246 - 34526301
Alignment:
Q  186 tgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    |||||| ||||| ||| |||| | ||||| ||||||||||||||||||||||||||    
T  34526246 tgtttgaattgacttactttcgagcttatgaaaaatagtttatgcaaataaataag 34526301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 341
Target Start/End: Original strand, 42611870 - 42611952
Alignment:
Q  259 tgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacata-aaattttatttatttgcataagtt 341  Q
    ||||||||||||| ||||||||||||| |||| ||  |||| | ||| ||||||||||| |||  |||||||||||||||||||    
T  42611870 tgtatcttcataagttgttttttcataaacta-ctcgacaagcttatgaataatacatataaagcttatttatttgcataagtt 42611952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 825795 - 825845
Alignment:
Q  313 acataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    ||||||||| ||||||||||||||||| | |||||| || |||||||||||    
T  825795 acataaaatcttatttatttgcataagctaaaaaattagccaatccaaacg 825845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 2494403 - 2494481
Alignment:
Q  260 gtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||||||||| | |||||||||| |||||||| |||| | |||||||||||  |||||  |||| ||||| |||||    
T  2494403 gtatcttcataaactattttttcataaactacctttacaagcttataaataatatgtaaaagcttatctatttacataa 2494481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 3564286 - 3564224
Alignment:
Q  277 tttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||| |||||||| |||| | ||| ||||||| |||||| ||||||||||| ||||||    
T  3564286 tttttcataaactaccttgacaaacttatgaataatatataaaagtttatttattttcataag 3564224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 7206590 - 7206668
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||| ||||||||||||| ||||||||||||  |   | ||||||| ||||||  ||||| |||||||||||    
T  7206590 tatcttcataagttgttttttcataaactaccttaacaggctcgtgaataataaataaaagcttattcatttgcataag 7206668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 9201691 - 9201653
Alignment:
Q  303 tataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  9201691 tataaataatacataaaaacttatttatttgcataagtt 9201653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 35010296 - 35010222
Alignment:
Q  258 ttgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    ||||||||| ||||| | |||| ||||| ||||| || |||| | ||||||||||||||||||  ||||||||||    
T  35010296 ttgtatctttataaactattttatcataaactacgttgacaaacttataaataatacataaaaacttatttattt 35010222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 3564382 - 3564329
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataa 240  Q
    ||||||||||| |||||||  | ||||| |||||||| ||||||||||||||||    
T  3564382 gtttggattgacttatttttgagcttatgaaaaatagcttatgcaaataaataa 3564329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 19414170 - 19414133
Alignment:
Q  302 ctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||||||  |||||||||||||||||    
T  19414170 ctataaataatacataaaaacttatttatttgcataag 19414133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 30956857 - 30956804
Alignment:
Q  190 tggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    |||||||| |||||||  | ||||| |||||||| |||||||||||||||||||    
T  30956857 tggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagtt 30956804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 36741083 - 36741026
Alignment:
Q  184 cttgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    |||||||||||||  |||||||  | ||||| |||||||| |||||||||||||||||    
T  36741083 cttgtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataag 36741026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 341
Target Start/End: Original strand, 43699463 - 43699567
Alignment:
Q  239 aagttctcactaatagtaattgtatcttcataaat--tgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||| |||||||   ||||||||||||||||    |||||||||||| ||||| || |||| | ||| ||||| ||||||||  ||||||||||| ||    
T  43699463 aagttcccactaatgaaaattgtatcttcataagagctgttttttcataaactacattgacaagcttatgaataagacataaaagcttatttatttgtat 43699562  T
Q  337 aagtt 341  Q
    |||||    
T  43699563 aagtt 43699567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 948160 - 948076
Alignment:
Q  256 aattgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||| ||||  |||||||| |||| |||||||| ||||   ||| ||||||||||||||  |||||||||| ||||||    
T  948160 aattgtatctttataagctgtttttttcataaactaccttgacaaagttatgaataatacataaaagcttatttattttcataag 948076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 10794909 - 10794984
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    ||||||||||||||||| | ||||| |||| || |||||||| | | | ||||||||||||||||  ||||||||||    
T  10794909 aattgtatcttcataaactattttt-cataaaccaccttaacgagcttttaaataatacataaaaacttatttattt 10794984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 22273886 - 22273830
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactacct 293  Q
    |||| |||||||||| |  ||||||||||||||||  |||||||||||| |||||||    
T  22273886 ataacttctcactaacaaaaattgtatcttcataagctgttttttcataaactacct 22273830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 28625567 - 28625451
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  |||||||||||| |||||||| |||| | ||| |||||||| |||||  ||||||||||||||||| | |||||||||||||    
T  28625567 aattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcataagctaaaaaataagtcaa 28625468  T
Q  356 tccaaacgagctctatg 372  Q
    |||||||| || |||||    
T  28625467 tccaaacgggccctatg 28625451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 41534710 - 41534604
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  ||||||||| || |||||||| |||| | ||| ||||||||||||||  ||||||||||||||||  | ||||||||| |||    
T  41534710 aattgtatcttcataagctgttttttcgtaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataatctgaaaaataagccaa 41534611  T
Q  356 tccaaac 362  Q
    |||||||    
T  41534610 tccaaac 41534604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 15122631 - 15122547
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||| |||||||||||| |||||||||| || | ||||||||||||||||||  |||||| ||||||||||||    
T  15122631 aattgtatcttcataaactgttttttcataaactaccttaa-aaacttataaataatacataaaaacttatttctttgcataagtt 15122547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 12986994 - 12987098
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||| |  ||| ||| ||||||||| |||||||||||| |||||||| |||| | ||| || |||||||||||  ||||||||||||||    
T  12986994 ataagttctcactaacaaaaatggtaacttcataaactgttttttcataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcat 12987093  T
Q  337 aagtt 341  Q
    |||||    
T  12987094 aagtt 12987098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 362
Target Start/End: Complemental strand, 28357457 - 28357333
Alignment:
Q  238 taagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    ||||||||||||||    ||||| | ||||||||| |||||||||||| ||||| ||||||| | ||||||||||||||| |    ||||||||||||||    
T  28357457 taagttctcactaacgaaaattggaccttcataaactgttttttcataaactacattaacaaacttataaataatacatataggcatatttatttgcata 28357358  T
Q  338 agtttaaaaataagtcaatccaaac 362  Q
    || || ||||||||  |||||||||    
T  28357357 agctttaaaataagctaatccaaac 28357333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 363
Target Start/End: Complemental strand, 40697093 - 40696981
Alignment:
Q  256 aattgtatcttcataaattgtttttt-----catacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataa 350  Q
    ||||||||||||||||  ||||||||     |||| | |||||| |||| | ||||||||||||||||||  ||||||||||||||||| | ||||||||    
T  40697093 aattgtatcttcataagctgttttttttcttcataaaataccttgacaagcttataaataatacataaaaacttatttatttgcataagctcaaaaataa 40696994  T
Q  351 gtcaatccaaacg 363  Q
    |||||| ||||||    
T  40696993 gtcaattcaaacg 40696981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 43319109 - 43319005
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    |||| || ||||||||| |||||||||||| ||||| ||||||| | |||||||||||||||||    |||||||||||||    
T  43319109 ataagttctcactaacgaaaattataccttcataaactgttttttcataaactacattaacaagcttataaataatacataaagacatatttatttgcat 43319010  T
Q  337 aagtt 341  Q
    |||||    
T  43319009 aagtt 43319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 42706885 - 42706767
Alignment:
Q  256 aattgtatcttcataaattgttttttc--atacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtc 353  Q
    ||||||||||||||||  ||||||||   ||| |||||||| |||| | ||| |||||||| |||||  ||||||||||||||||| | ||||||||| |    
T  42706885 aattgtatcttcataagctgtttttttttataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcataagctcaaaaataagcc 42706786  T
Q  354 aatccaaacgagctctatg 372  Q
    |||||||||| || |||||    
T  42706785 aatccaaacgggccctatg 42706767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 12467371 - 12467269
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttatttgca 335  Q
    ||||||||||||||| |  |||||| |||||||||  |||||||| |||| |||||||| |||| | ||| ||||||||||||||  |||||||||||||    
T  12467371 ataagttctcactaacaaaaattgtctcttcataagctgtttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgca 12467272  T
Q  336 taa 338  Q
    |||    
T  12467271 taa 12467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 363
Target Start/End: Complemental strand, 17657348 - 17657222
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||| ||||||||||||  |||||||||||| |||||  |  ||| | ||| ||||||||||||||  ||||||||||||||    
T  17657348 ataagttctcactaacgaaaatcgtatcttcataagatgttttttcataaactacaatggcaagcttatgaataatacataaaagcttatttatttgcat 17657249  T
Q  337 aagtttaaaaataagtcaatccaaacg 363  Q
    ||||| ||||| |||| ||| ||||||    
T  17657248 aagttcaaaaacaagttaattcaaacg 17657222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 1473443 - 1473358
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||  |||||||||||| | || ||| |||| | ||| ||||||||||||||  |||||||||||||||||||    
T  1473443 aattgtatcttcataagctgttttttcataaattaacttgacaagcttatgaataatacataaaagcttatttatttgcataagtt 1473358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 23087759 - 23087861
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||| |  ||||||| |||||| | ||||||||||||| ||||  ||||||| | ||||||||||||||||||    ||||||||||||    
T  23087759 ataagttctcactaacaaaaattgtaccttcatgagttgttttttcataaactatattaacaagcttataaataatacataaaa--acatttatttgcat 23087856  T
Q  337 aagtt 341  Q
    |||||    
T  23087857 aagtt 23087861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 40415971 - 40416056
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||| ||| ||| ||||||||||||  ||||||||||||| | |||||||||||||| ||  |||| |||||||||||||||    
T  40415971 aattgtatattcttaagttgttttttcatgaactaccttaacaaacttataaataatacattaatgtttagttatttgcataagtt 40416056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 13060582 - 13060686
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||| ||| ||||||||  |||||||||||| |||||||| |||| | ||| || |||||||||||  ||||||||||||||    
T  13060582 ataagttctcactaacgaaaatggtaacttcataagctgttttttcataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcat 13060681  T
Q  337 aagtt 341  Q
    |||||    
T  13060682 aagtt 13060686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 29418751 - 29418834
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||| |||||||||||||||||||||| ||||| ||| ||  | |||||||||||||||||    ||||||||||||||||    
T  29418751 aattgtaccttcataaattgttttttcataaactacattagcatgcttataaataatacataaagacatatttatttgcataag 29418834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 29659166 - 29659066
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||||   |||||||  |||||||| ||||||||| || ||||| ||||||| | |||||||||||||||||    |||||||||||||    
T  29659166 ataagttctcactaatgaaaattgtactttcataaactgttttttcttaaactacattaacaagcttataaataatacataaa--catatttatttgcat 29659069  T
Q  337 aag 339  Q
    |||    
T  29659068 aag 29659066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 33757170 - 33757092
Alignment:
Q  260 gtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||| || |||||||||||| |||| ||||| || | ||||||||||||||||||  |||||||||||||||||    
T  33757170 gtatcttcattaactgttttttcataaactagcttaaaaa-cttataaataatacataaaaacttatttatttgcataag 33757092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 41419607 - 41419485
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||||||||||||||||  |||||||||||| |||||||| |||| | ||| |||||||   ||||  |||||||| |||||    
T  41419607 ataagttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataata---aaaaacttatttatatgcat 41419511  T
Q  337 aagtttaaaaataagtcaatccaaac 362  Q
    ||  | ||||||||| ||||||||||    
T  41419510 aatctgaaaaataagccaatccaaac 41419485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 26003084 - 26003002
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||    ||||||||| | || |||||||| | ||||||||||||||||||  ||||||||||||||||    
T  26003084 aattgtatcttcataaaccactttttcataaaataacttaacaaacttataaataatacataaaaacttatttatttgcataa 26003002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 361
Target Start/End: Original strand, 38461268 - 38461386
Alignment:
Q  243 tctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagttt 342  Q
    ||||||||| |  |||| |||||||||||| |||||||||||| | ||| || |||| | |||||||||||||||||   ||||||||||  ||||| |     
T  38461268 tctcactaacaaaaattatatcttcataaactgttttttcataaaatacatttacaaacttataaataatacataaaggcttatttatttttataagctc 38461367  T
Q  343 aaaaataagtcaatccaaa 361  Q
     ||||||||| ||||||||    
T  38461368 taaaataagttaatccaaa 38461386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 247 - 341
Target Start/End: Complemental strand, 39990672 - 39990578
Alignment:
Q  247 actaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||  |||||||| ||| |||  |||||||||||| | ||||||||||| | |||||||||||||| ||  |||||||||||| |||||||    
T  39990672 actaataaaaattgtatattcttaagatgttttttcataaattaccttaacaaacatataaataatacattaatgtttatttatttgtataagtt 39990578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 339
Target Start/End: Complemental strand, 1576735 - 1576635
Alignment:
Q  238 taagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    |||||||||||||| |  ||||||||||||| || |||||||| |||| ||||| || |||| | ||| || ||||||||||| ||||||||||||| ||    
T  1576735 taagttctcactaacaaaaattgtatcttcacaagttgtttttccataaactacattgacaagcttatgaa-aatacataaaagtttatttatttgctta 1576637  T
Q  338 ag 339  Q
    ||    
T  1576636 ag 1576635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 1608080 - 1608180
Alignment:
Q  238 taagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    |||||||||||||| |  ||||||||||||| || |||||||| |||| ||||| || |||| | ||| || ||||||||||| ||||||||||||| ||    
T  1608080 taagttctcactaacaaaaattgtatcttcacaagttgtttttccataaactacattgacaagcttatgaa-aatacataaaagtttatttatttgctta 1608178  T
Q  338 ag 339  Q
    ||    
T  1608179 ag 1608180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 1868933 - 1868828
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||||||||||||||| ||| ||||||||| |||||||| |||| | | | ||||||||||||||  ||||||||| |||| || | || |||||| | |    
T  1868933 aattgtatcttcataagttgatttttcataaactaccttgacaagcttgtgaataatacataaaagcttatttattagcatgagctcaagaataagccca 1868834  T
Q  356 tccaaa 361  Q
    ||||||    
T  1868833 tccaaa 1868828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 363
Target Start/End: Complemental strand, 1943083 - 1942990
Alignment:
Q  270 aaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    ||||||| | |||||| |||||||| |||| | |||  |||||||||||||  ||||||| ||||||||| | ||||||||| |||||||||||    
T  1943083 aaattgtatcttcataaactaccttgacaagcttatggataatacataaaaacttatttacttgcataagctcaaaaataagccaatccaaacg 1942990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 5203435 - 5203515
Alignment:
Q  258 ttgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||||  |||| ||||| |||||||||| |||  |||||||||||||||||   |||||||||||||||||    
T  5203435 ttgtatcttcataaatgattttctcataaactaccttaaaaatt-tataaataatacataaatacttatttatttgcataag 5203515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 6125323 - 6125274
Alignment:
Q  307 aataatacataaaattttatttatttgcataagtttaaaaataagtcaat 356  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  6125323 aataatacataaaagtttatttatttacataagttcaaaaataagtcaat 6125274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 10537236 - 10537301
Alignment:
Q  274 tgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||| |||| ||| |||| | ||||||||||||||||||  |||||||||||||||||    
T  10537236 tgttttttcataaactatcttgacaagcttataaataatacataaaagcttatttatttgcataag 10537301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 29922169 - 29922270
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||| ||||||||| |  |||||||| | |||||  ||| |||||||| |||||||| |||| | ||| ||||||||||||||  ||||||||||||||    
T  29922169 ataagctctcactaaaaaaaattgtatatgcataagctgtgttttcataaactaccttgacaagcttatgaataatacataaaaacttatttatttgcat 29922268  T
Q  337 aa 338  Q
    ||    
T  29922269 aa 29922270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 589325 - 589273
Alignment:
Q  191 ggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    |||||||||||||||  | |||||||||||||| |||||||||||||||||||    
T  589325 ggattgatttatttttgagcttataaaaaatagcttatgcaaataaataagtt 589273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 2670234 - 2670182
Alignment:
Q  188 tttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataa 240  Q
    ||||||||||||||||||||| ||||| |||| || |||||||||||||||||    
T  2670234 tttggattgatttattttcaagcttatgaaaagtaatttatgcaaataaataa 2670182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 336
Target Start/End: Original strand, 7364289 - 7364388
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||| |   ||||||||||||||| |||||| || ||| ||||||||||||| | ||| ||||||| ||| ||  |||||| |||||||    
T  7364289 ataagttctcactaacaaatattgtatcttcataagttgtttgttgataaactaccttaacaagcttatgaataataaatagaagcttatttttttgcat 7364388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 15414079 - 15413996
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||| ||||||| |||||||||  || ||||||||||||| | ||| |||||||||| ||   |||||||||||||||||    
T  15414079 aattgtatattcataagttgttttttagtaaactaccttaacaaacttatcaataatacattaatacttatttatttgcataag 15413996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 16722110 - 16722032
Alignment:
Q  259 tgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||||||||||  |||| ||| || |||||||||| |||  ||||||||||||||||||  ||||||||||||||||    
T  16722110 tgtatcttcataaacggtttcttcgtaaactaccttaaaaatt-tataaataatacataaaaacttatttatttgcataa 16722032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 780587 - 780648
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||| |||||||||| || | |||||||||||||||||| | |||||||||||||||    
T  780587 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataa 780648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 4728923 - 4728850
Alignment:
Q  265 ttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||| |||||||||||| |||||||||| || | | || |||||||||||||  |||||||||||||||||    
T  4728923 ttcataaactgttttttcataaactaccttaaaaa-cttgtagataatacataaaaacttatttatttgcataag 4728850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 6025984 - 6026065
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||||||| |||||  ||||||||||| ||||| |||||||   ||||||||||||||||||   |||||||||||||||    
T  6025984 aattgtatctttataaaccgttttttcataaactacgttaacaaaattataaataatacataaaa-catatttatttgcataa 6026065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 31637093 - 31637196
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  |||| ||||||| | |||||| |||| | ||| ||||||||||||||      ||||||||||||| | | |||||||||||    
T  31637093 aattgtatcttcataagctgttctttcataaattaccttgacaagcttatgaataatacataaaa----gcttatttgcataagctcataaataagtcaa 31637188  T
Q  356 tccaaacg 363  Q
    ||||||||    
T  31637189 tccaaacg 31637196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 363
Target Start/End: Original strand, 41059769 - 41059895
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||||| ||||||||||  || ||||||||| || ||||| | || | ||| ||||||||||||||  |||||| |||||||    
T  41059769 ataagttctcactaacgaaaattgaatcttcataaggtgatttttcataaacaaccttgataagcttatgaataatacataaaagcttatttgtttgcat 41059868  T
Q  337 aagtttaaaaataagtcaatccaaacg 363  Q
    ||| | |||| |||| |||| ||||||    
T  41059869 aagctaaaaagtaagccaatacaaacg 41059895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 42852127 - 42852026
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    |||||||| || |||| ||||||||||||| |||| ||| |||| | ||| ||||||||||||||  ||||||||||| ||    
T  42852127 ataagttctcactaacgaaaattgtatttt-ataagttgttttttcataaactatcttgacaagcttatgaataatacataaaagcttatttatttgaat 42852029  T
Q  337 aag 339  Q
    |||    
T  42852028 aag 42852026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 363
Target Start/End: Complemental strand, 3977551 - 3977457
Alignment:
Q  267 cataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    |||||| |||||||||||| |||||||| |||| | ||| |||||| || |||| |||||||||||||  ||| | ||||||||| || ||||||||    
T  3977551 cataaactgttttttcataaactaccttgacaagcttatgaataatgcacaaaagtttatttatttgc--aagctcaaaaataagccagtccaaacg 3977457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 6144844 - 6144719
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||| |||| |  |||||||| |||||||  | |||||||||| | |||||| |||| | ||| | ||||| ||||||  |||||||||| |||    
T  6144844 ataagttctcgctaacaaaaattgtatattcataagctattttttcataaaataccttgacaagcttatgagtaatatataaaagcttatttatttacat 6144745  T
Q  337 aagtttaaaaataagtcaatccaaac 362  Q
     || | ||||||||||||||| ||||    
T  6144744 gagctcaaaaataagtcaatctaaac 6144719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 6008327 - 6008363
Alignment:
Q  305 taaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||| ||||||||||||||||||||    
T  6008327 taaataatacataaaagtttatttatttgcataagtt 6008363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 40152875 - 40152951
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||   |||  |||||| ||||||  ||||||||||    
T  40152875 aattttatcttcataaattgttttttcataaactatcttaacaaatttatggataataaataaaaacttatttattt 40152951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 42095332 - 42095384
Alignment:
Q  183 acttgtttggattgatttattttcaatcttataaaaaatagtttatgcaaata 235  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||| |||||||||    
T  42095332 acttgtttggattgacttatttttaagtttataaaaaatagttcatgcaaata 42095384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 341
Target Start/End: Complemental strand, 342075 - 341992
Alignment:
Q  258 ttgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||  || ||||||||| ||||||||  ||| | | ||||||||||||||||  |||||||||| ||| ||||    
T  342075 ttgtatcttcataagctgatttttcataaactaccttggcaaacttgtaaataatacataaaaacttatttatttacatgagtt 341992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 3520416 - 3520471
Alignment:
Q  186 tgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    |||||||||||| ||||||| ||| |||| |||||||| ||| |||||||||||||    
T  3520416 tgtttggattgacttatttttaatattatgaaaaatagcttacgcaaataaataag 3520471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 20458577 - 20458639
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||| ||| |||||||||| || | |||||||||||||||||| | ||||||||||||||||    
T  20458577 tttttttataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataag 20458639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 341
Target Start/End: Complemental strand, 22573726 - 22573655
Alignment:
Q  270 aaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||| |||||||| ||||| || |||| | ||||||||||||| ||||  | |||||||||||||||||    
T  22573726 aaattgtattttcataaactacatttacaaacttataaataatacaaaaaaactcatttatttgcataagtt 22573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 33667396 - 33667474
Alignment:
Q  260 gtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||| | | |||| ||||| |||||||||| || | | ||||||||||||||||  |||||||||||||||||    
T  33667396 gtatcttcatatactattttgtcataaactaccttaaaaa-cttgtaaataatacataaaaacttatttatttgcataag 33667474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 35536932 - 35536823
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcct---ataaataatacataaaattttatttatttgcataag-tttaaaaataag 351  Q
    ||||||||||||||||  |||||||||||| |||| ||| |||| | |   || ||||| ||||||||  |||| |||||||||||| |  |||||||||    
T  35536932 aattgtatcttcataagctgttttttcataaactatcttgacaagcttatgatgaataacacataaaagcttatgtatttgcataagctaaaaaaataag 35536833  T
Q  352 tcaatccaaa 361  Q
    ||||||||||    
T  35536832 tcaatccaaa 35536823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 40452477 - 40452584
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||| |||||||||||  ||||| |||||| |||||||| |||| | ||| |||||| |||||||  |||||  |||||||||| |  |||||||| |||    
T  40452477 aattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcataagctcgaaaataagccaa 40452576  T
Q  356 tccaaacg 363  Q
    || |||||    
T  40452577 tcgaaacg 40452584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 10274310 - 10274260
Alignment:
Q  307 aataatacataaaattttatttatttgcataagtttaaaaataagtcaatc 357  Q
    ||||||| ||||||| ||||||||||||||||  | |||||||||||||||    
T  10274310 aataatatataaaatcttatttatttgcataaactcaaaaataagtcaatc 10274260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 341
Target Start/End: Complemental strand, 2531388 - 2531328
Alignment:
Q  280 ttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||| |||||||||| || | |||||||||||||||| |  |||||||||||||||||||    
T  2531388 ttcataaactaccttaaaaa-cttataaataatacataacaacttatttatttgcataagtt 2531328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 15709911 - 15709975
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||| ||||| |||| || | ||||||||||||| ||||  |||||||||||||||||||    
T  15709911 ttttttcataaactactttaaaaa-cttataaataatacagaaaaacttatttatttgcataagtt 15709975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 17668466 - 17668402
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||| |||||||||| || | |||||||||||||||||    ||||||||||||||||||    
T  17668466 ttttttcataaactaccttaaaaa-cttataaataatacataaacacctatttatttgcataagtt 17668402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 24030284 - 24030219
Alignment:
Q  274 tgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||| ||||| || |||| | ||| ||||||||||||||  ||||||||||| |||||    
T  24030284 tgttttttcataaactactttgacaagcttatgaataatacataaaagcttatttatttggataag 24030219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 367
Target Start/End: Complemental strand, 33924720 - 33924687
Alignment:
Q  334 cataagtttaaaaataagtcaatccaaacgagct 367  Q
    ||||||||||||||||||| ||||||||||||||    
T  33924720 cataagtttaaaaataagttaatccaaacgagct 33924687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 43268634 - 43268703
Alignment:
Q  270 aaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||| | |||||| |||||||| || | | ||| ||||||||||||||  |||||||||||||||||    
T  43268634 aaattgtatcttcataaactaccttgaccagcttattaataatacataaaagcttatttatttgcataag 43268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 589140 - 589172
Alignment:
Q  211 ttataaaaaatagtttatgcaaataaataagtt 243  Q
    ||||| |||||||||||||||||||||||||||    
T  589140 ttatacaaaatagtttatgcaaataaataagtt 589172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 2878659 - 2878758
Alignment:
Q  239 aagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||| ||||||| |  |||||||||||| |||| |||| ||||||| || || || |||| | ||| ||||||| ||||||  ||||||||||||||||    
T  2878659 aagttttcactaacaaaaattgtatcttc-taaactgttgtttcataaaccacattgacaaacttatgaataatagataaaagcttatttatttgcataa 2878757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 7984211 - 7984107
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||| ||   |||||||||||  |||| |||||||||  | || || || |||| | ||| ||||||||||||||  ||| ||||||||||    
T  7984211 ataagttctcacttatgaaaattgtatctttgtaaactgttttttctcaaacaactttgacaaacttatgaataatacataaaaacttagttatttgcat 7984112  T
Q  337 aagtt 341  Q
    |||||    
T  7984111 aagtt 7984107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 337
Target Start/End: Original strand, 11912082 - 11912182
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||| |  ||||||||||||||||  | |||||||| | ||||| || ||||   ||| || |||||||||||  ||||||||| ||||    
T  11912082 ataagttctcactaacaaaaattgtatcttcataagctcttttttcacaaactactttgacaagattatgaacaatacataaaagcttatttattagcat 11912181  T
Q  337 a 337  Q
    |    
T  11912182 a 11912182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 16722006 - 16722050
Alignment:
Q  199 ttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    ||||||| || |||||| |||||| ||||||||||||||||||||    
T  16722006 ttattttaaagcttatagaaaataatttatgcaaataaataagtt 16722050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 19840181 - 19840149
Alignment:
Q  210 cttataaaaaatagtttatgcaaataaataagt 242  Q
    ||||||||||||||||||| |||||||||||||    
T  19840181 cttataaaaaatagtttatacaaataaataagt 19840149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 26002964 - 26003020
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    ||||||||| | |||||||  | |||||| |||| ||||||||||||||||||||||    
T  26002964 gtttggattaacttattttagagcttatacaaaacagtttatgcaaataaataagtt 26003020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 28357228 - 28357164
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa 320  Q
    ||||||||||||||||  |||||||||||| ||||| || |||| | | ||||||||||| ||||    
T  28357228 aattgtatcttcataacctgttttttcataaactacattgacaagcttttaaataatacaaaaaa 28357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 28357254 - 28357310
Alignment:
Q  313 acataaaattttatttatttgcataagtttaaaaataagtcaatccaaacgagctct 369  Q
    ||||||||  ||||||||||||||||| | ||||||||| |||| |||||| |||||    
T  28357254 acataaaagcttatttatttgcataagctaaaaaataagccaatacaaacgggctct 28357310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 29136735 - 29136790
Alignment:
Q  188 tttggattgatttattttcaatcttataaaa--aatagtttatgcaaataaataag 241  Q
    |||||||||| |||||||  | |||||||||  |||||||||||||||||||||||    
T  29136735 tttggattgacttatttttcagcttataaaaaaaatagtttatgcaaataaataag 29136790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 47511130 - 47511024
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  |||||||||||| ||| ||||||||| | ||| ||||||||||||||  ||||||||||||||||| | ||||||||| |||    
T  47511130 aattgtatcttcataagctgttttttcatagacttccttaacaagcttatgaataatacataaaagcttatttatttgcataagctcaaaaataagccaa 47511031  T
Q  356 tccaaac 362  Q
    |||||||    
T  47511030 tccaaac 47511024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 29378732 - 29378626
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  |||||||||||| |||||||| |||| |  |||||||||||||||||  ||||||||||||||||| | ||| ||||| |||    
T  29378732 aattgtatcttcataagctgttttttcataaactaccttgacaaactcataaataatacataaaagcttatttatttgcataagctcaaagataagccaa 29378633  T
Q  356 tccaaac 362  Q
    |||||||    
T  29378632 tccaaac 29378626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 16932929 - 16933013
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||||| ||||||||||| |||||||||| || | |||||||||||||||||| |||||||| |||||||||||    
T  16932929 aattgtatcttcataaatggttttttcataaactaccttaa-aaacttataaataatacataaaaatttatttagttgcataagtt 16933013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 16938312 - 16938396
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||||| ||||||||||| |||||||||| || | |||||||||||||||||| |||||||| |||||||||||    
T  16938312 aattgtatcttcataaatggttttttcataaactaccttaa-aaacttataaataatacataaaaatttatttagttgcataagtt 16938396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 22032868 - 22032764
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||||||| |||||||||||||||||||||| ||||| ||||||  | ||||||||||||||||||   |||||||||||||    
T  22032868 ataagttctcactaacgaaaattgtaccttcataaattgttttttcataaactacattaacatgcttataaataatacataaaaacatatttatttgcat 22032769  T
Q  337 aagtt 341  Q
    |||||    
T  22032768 aagtt 22032764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 363
Target Start/End: Original strand, 14691279 - 14691405
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa-ttttatttatttgca 335  Q
    |||||||||||||||    |||| ||||||||||||||||||||||||| | ||| || |||| | ||| ||||||||||||||  ||||||||||||||    
T  14691279 ataagttctcactaacgaaaattatatcttcataaattgttttttcataaattacattgacaagcttatgaataatacataaaagctttatttatttgca 14691378  T
Q  336 taagtttaaaaataagtcaatccaaacg 363  Q
     ||||| ||||| |||||||||||||||    
T  14691379 -aagttcaaaaacaagtcaatccaaacg 14691405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 44613453 - 44613555
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||| | |||||  ||||||||| |||||| ||||||||||||| ||||||||||||| | ||| ||||||| ||||||  ||||||||||||||    
T  44613453 ataagttctaattaataaaaattgtatcgtcataagttgttttttcataaactaccttaacaagcttatgaataataaataaaagcttatttatttgcat 44613552  T
Q  337 aag 339  Q
    |||    
T  44613553 aag 44613555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 16958902 - 16958818
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||||  ||||||||||| |||||||||| || | |||||||||||||||||| |||||||| |||||||||||    
T  16958902 aattgtatcttcataaacggttttttcataaactaccttaaaaa-cttataaataatacataaaaatttatttagttgcataagtt 16958818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 22575673 - 22575590
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||||| |||||||||||| | || |||||||| | ||||||||||||||||||   ||||||||||||||||    
T  22575673 aattgtatcttcataaactgttttttcataaaatatcttaacaaacttataaataatacataaaaacgtatttatttgcataag 22575590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 14675959 - 14676043
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||| |||||||||||| |||||||||| || | |||||||||||||||||    ||||||||||||||||||    
T  14675959 aattgtatcttcataaactgttttttcataaactaccttaa-aaacttataaataatacataaacacctatttatttgcataagtt 14676043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 20888661 - 20888578
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat-aaaattttatttatttgcataa 338  Q
    |||||||||||||||||||||||||||||| ||||||||  ||| | ||| |||||||||| ||||  ||||||||||||||||    
T  20888661 aattgtatcttcataaattgttttttcataaactacctttgcaagcttatgaataatacataaaaagcttatttatttgcataa 20888578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 28004668 - 28004588
Alignment:
Q  258 ttgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||| ||||||||||| ||||| |||| ||   ||||||||||||||||||  |||||||||||||||||    
T  28004668 ttgtatcttcataaatggttttttcataaactac-ttaaaaaaattataaataatacataaaaacttatttatttgcataag 28004588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 29390550 - 29390634
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||| |||||||| |||| |||||||| |||| | ||| |||||||||| |||  |||||||||||||||||||    
T  29390550 aattgtatcttcataagttgttttt-cataaactacctttacaagcttatgaataatacatcaaagattatttatttgcataagtt 29390634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 43391808 - 43391723
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||| |||||||||||||| |||||||||| ||||||||||||| | ||| ||||||| | | || ||||||||||| ||||||||    
T  43391808 aattatatcttcataaattattttttcataaactaccttaacaaacttatgaataataaacataagtttatttatttacataagtt 43391723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 991583 - 991504
Alignment:
Q  259 tgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||| ||||||||||| |||||||||| || | |||||||||| |||||||  |||||||| ||||||||    
T  991583 tgtatcttcataaatggttttttcataaactaccttaa-aaacttataaataatgcataaaaacttatttatgtgcataag 991504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 211 - 339
Target Start/End: Original strand, 21027467 - 21027595
Alignment:
Q  211 ttataaaaaatagtttatgcaaataaataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaata 310  Q
    ||||| ||||||||||||| ||||||||||  | | | ||  |  ||||||||||||| ||| |||||||||||| || ||||||| || | ||||||||    
T  21027467 ttatagaaaatagtttatgtaaataaataaactttaattacaaaaaattgtatcttcaaaaactgttttttcataaaccaccttaataaacttataaata 21027566  T
Q  311 atacataaaattttatttatttgcataag 339  Q
    ||||||||||  |||||| ||| ||||||    
T  21027567 atacataaaaacttatttgtttacataag 21027595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 23137143 - 23137246
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||| ||||||||||   |||||||||||||||||   ||||| |||| |||||||||| || | |||||||||||||||||| ||||||| |||| ||    
T  23137143 ataagctctcactaatgaaaattgtatcttcataaacgatttttacataaactaccttaaaaa-cttataaataatacataaaaatttatttgtttgtat 23137241  T
Q  337 aagtt 341  Q
    |||||    
T  23137242 aagtt 23137246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 35809177 - 35809094
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||| ||| ||| ||||||||||||| ||||| ||||||| | |||||||||||||| ||   |||||||||||||||||    
T  35809177 aattgtatattcttaagttgttttttcataaactacgttaacaagcttataaataatacattaatgcttatttatttgcataag 35809094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 35246756 - 35246674
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||| |||||||  ||||||||||| |||||||||| || | | ||||||||||||||||  |||||||||||||||||||    
T  35246756 aattgtatcctcataaa--gttttttcataaactaccttaaaaa-cttttaaataatacataaaaacttatttatttgcataagtt 35246674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 41677462 - 41677376
Alignment:
Q  256 aattgtatcttcataaattg-ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||  || |||||| ||| ||||| || |||| | ||| |||||||||||||| ||||||||||||||||||||    
T  41677462 aattgtatcttcataatctggttttttaataaactacattgacaaacttatgaataatacataaaaatttatttatttgcataagtt 41677376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 19308472 - 19308573
Alignment:
Q  238 taagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    ||||| |||||||| |  ||||| ||||||||||  |  ||||||||| |||||| |||||| | ||| |||||||||| ||||||||||||||| ||||    
T  19308472 taagtcctcactaacaaaaattggatcttcataagctaatttttcataaactaccctaacaaacttatgaataatacatgaaattttatttattttcata 19308571  T
Q  338 ag 339  Q
    ||    
T  19308572 ag 19308573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 38038186 - 38038239
Alignment:
Q  188 tttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    ||||||||||||||||||  |  |||||||||||||||||||||||||||||||    
T  38038186 tttggattgatttattttttagtttataaaaaatagtttatgcaaataaataag 38038239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 341
Target Start/End: Complemental strand, 14536964 - 14536885
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||| |||||||||||| |||| ||| |||||| ||| ||||||||||||||  ||||||||||  |||||||    
T  14536964 tatcttcataaagtgttttttcataaactatcttgacaatcttatgaataatacataaaa-attatttatttctataagtt 14536885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 23119849 - 23120000
Alignment:
Q  186 tgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagttctcactaatagtaattgtatcttcataaattgttttttcata 285  Q
    |||||||||||| |||||||  | ||||| || ||||| ||||| ||||  ||||||| |||| || |  ||||||||||||| ||| |||| |||| ||    
T  23119849 tgtttggattgacttatttttgagcttatgaagaatagcttatgtaaatttataagttttcacgaacaaaaattgtatcttcacaaactgttatttctta 23119948  T
Q  286 cactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
     ||||| || |||| | ||| |||||||| | |||  |||||||||||||||    
T  23119949 aactacattgacaaacttatgaataatactttaaagattatttatttgcata 23120000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 29390460 - 29390515
Alignment:
Q  186 tgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    |||||||||||| |||||||  | ||||| ||||||||||||||||||||||||||    
T  29390460 tgtttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaataag 29390515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 47654394 - 47654473
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat 316  Q
    |||||||||||||||    ||||||| ||||||||| |||||||||||| ||||| ||||||| | |||| |||||||||    
T  47654394 ataagttctcactaacgaaaattgtaccttcataaactgttttttcataaactacattaacaagcttatatataatacat 47654473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 19914025 - 19913947
Alignment:
Q  263 tcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||  ||||||||||| ||||| |||||||   ||||||||  |||||||| ||||||||||| ||||||||    
T  19914025 tcttcataaaccgttttttcataaactacattaacaaatttataaatagcacataaaaatttatttatttacataagtt 19913947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 22319290 - 22319372
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||| ||||||| ||||| ||||||| ||||  ||||||| | ||| |||||||||| ||  |||||||||||||||||    
T  22319290 aattgtatattcataagttgttgtttcataaactatgttaacaaacttatgaataatacattaatgtttatttatttgcataa 22319372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 46743989 - 46743931
Alignment:
Q  304 ataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    |||||||||||||||||| |||||||||||||| || | |||| |||| ||||||||||    
T  46743989 ataaataatacataaaatcttatttatttgcatgagctcaaaagtaagccaatccaaac 46743931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 48949802 - 48949725
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataa-tacataaaattttatttatttgcataa 338  Q
    |||||||||||| |||||||||||| |||||||||| || | ||||||||| |||||||||  | ||||||||||||||    
T  48949802 tatcttcataaactgttttttcataaactaccttaa-aaacttataaataattacataaaaactcatttatttgcataa 48949725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 30181633 - 30181552
Alignment:
Q  260 gtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||  |||||||| ||| |||||||| |||| | ||| ||||||||||||||  || ||||||||| ||||||    
T  30181633 gtatcttcataagctgttttttgataaactaccttgacaagcttatgaataatacataaaagcttctttatttgcctaagtt 30181552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 34922998 - 34922933
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||| ||| |||||||| |||| | ||| ||||||||||||||  |||||||||||||||||||    
T  34922998 tttttttataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataagtt 34922933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 44799371 - 44799427
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    ||||||||| | |||||||  | |||||| |||||||||||||||||||||||||||    
T  44799371 gtttggattaacttattttagaacttatataaaatagtttatgcaaataaataagtt 44799427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 43818858 - 43818941
Alignment:
Q  237 ataagttctcactaatagtaattgtatc-ttcataaattgttttttcatacactaccttaacaatcctataaataatacataaa 319  Q
    ||||||||||||||||   ||||||| | |||||||| |||||||||||| |  || ||||||| | |||||||||||||||||    
T  43818858 ataagttctcactaatgaaaattgtaaccttcataaactgttttttcataaataacattaacaagcttataaataatacataaa 43818941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 14593217 - 14593152
Alignment:
Q  276 ttttttcatacactaccttaacaatcctata--aataatacataaaattttatttatttgcataag 339  Q
    |||||||||| ||||| || |||| | ||||  ||||||||||||| |||||||||||||||||||    
T  14593217 ttttttcataaactactttgacaagcttatatgaataatacataaacttttatttatttgcataag 14593152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 29778479 - 29778433
Alignment:
Q  315 ataaaattttatttatttgcataagtttaaaaataagtcaatccaaa 361  Q
    |||||| |||||||||||||||||| | |||||||||||||| ||||    
T  29778479 ataaaaatttatttatttgcataagctaaaaaataagtcaattcaaa 29778433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 33288149 - 33288199
Alignment:
Q  307 aataatacataaaattttatttatttgcataagtttaaaaataagtcaatc 357  Q
    ||||||||||||||  ||||||||||||||||| | ||||||| |||||||    
T  33288149 aataatacataaaagcttatttatttgcataagctcaaaaatatgtcaatc 33288199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 2194041 - 2194128
Alignment:
Q  256 aattgtatcttcataaat--tgttttttcatacactaccttaacaatcctataaataa-tacataaaattttatttatttgcataagtt 341  Q
    |||| |||||||||||||  | |||||||||| |||||||||| || | ||||||||| |||||||||  ||| |||||||||||||||    
T  2194041 aattatatcttcataaattattttttttcataaactaccttaa-aaacttataaataagtacataaaaacttaattatttgcataagtt 2194128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 9024852 - 9024787
Alignment:
Q  256 aattgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaa 320  Q
    ||||||| ||||||||| |||||||| |||| ||||| ||||||  | ||||||||||||||||||    
T  9024852 aattgtaccttcataaactgtttttttcataaactacattaacacacgtataaataatacataaaa 9024787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 24371420 - 24371488
Alignment:
Q  270 aaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||| | |||||| |||||||||| || | |||||||||||||| |||  |||||||||||||||||    
T  24371420 aaattgtatcttcataaactaccttaaaaa-cttataaataatacattaaaacttatttatttgcataag 24371488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 44799484 - 44799409
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||| | |||||||| | |||||||||| || | ||||||||||| ||||||  ||||||||||||||||    
T  44799484 tatcttcataaactattttttcaaaaactaccttaa-aaacttataaataata-ataaaaacttatttatttgcataa 44799409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 48021628 - 48021728
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||| ||||||||   |||||||||||||| | || ||||| |||| ||||| ||||||| | ||| ||||||| |||| |  ||||||||||||||    
T  48021628 ataagttttcactaatgaaaattgtatcttcattagttattttt-cataaactactttaacaagcttatgaataataaataagagcttatttatttgcat 48021726  T
Q  337 aa 338  Q
    ||    
T  48021727 aa 48021728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 1054118 - 1054174
Alignment:
Q  307 aataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    ||||||||||||||  ||||||||||||||||| | |||| ||||| ||| ||||||    
T  1054118 aataatacataaaagcttatttatttgcataagctcaaaactaagtgaatacaaacg 1054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 341
Target Start/End: Original strand, 23356475 - 23356575
Alignment:
Q  241 gttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagt 340  Q
    ||||||||||| |  ||| |||| |||||||| |||||||||||| | |||||| |||| | | | ||||||||| |||   |||||||||| |||||||    
T  23356475 gttctcactaacaaaaatagtattttcataaactgttttttcataaattaccttgacaaacttgtgaataatacaaaaagccttatttattttcataagt 23356574  T
Q  341 t 341  Q
    |    
T  23356575 t 23356575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 35713612 - 35713564
Alignment:
Q  314 cataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    |||||||  ||||||||||||||||| |||| |||||| ||||||||||    
T  35713612 cataaaaggttatttatttgcataagcttaagaataagccaatccaaac 35713564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 41094183 - 41094139
Alignment:
Q  307 aataatacataaaattttatttatttgcataagtttaaaaataag 351  Q
    ||||||||||| || |||||||||||||||||| | |||||||||    
T  41094183 aataatacatagaagtttatttatttgcataagctaaaaaataag 41094139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 5e-23; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 2034228 - 2034335
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||||||||||  ||| ||||||||||||| |||||||| |||| | ||||||||||||||||||  ||||||||||||||||| | ||||| ||| |||    
T  2034228 aattgtatcttggtaagttgttttttcataaactaccttgacaaacttataaataatacataaaagcttatttatttgcataagctcaaaaacaagccaa 2034327  T
Q  356 tccaaacg 363  Q
    ||||||||    
T  2034328 tccaaacg 2034335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 29052420 - 29052337
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||| ||||||| |||||||||||| | ||||||||||| | |||||||||||||||||| ||||||| |||| |||||    
T  29052420 aattgtatcatcataaactgttttttcataaaataccttaacaaacttataaataatacataaaagtttatttttttgtataag 29052337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 32615414 - 32615496
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||||| ||||||||||  |||||||||| |||  ||||||||||||||||||  |||||||||||||||||    
T  32615414 aattgtatcttcataaatagttttttcatcaactaccttaaaaat-ttataaataatacataaaaacttatttatttgcataag 32615496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 21025227 - 21025333
Alignment:
Q  257 attgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaat 356  Q
    ||||||||||||||   | |||||||||| ||||||||||||| | |||  |||||||||||||  ||||||||||||||||| | |||||| || ||||    
T  21025227 attgtatcttcataggctcttttttcataaactaccttaacaagcttatgcataatacataaaagcttatttatttgcataagctaaaaaattagccaat 21025326  T
Q  357 ccaaacg 363  Q
    |||||||    
T  21025327 ccaaacg 21025333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 32675869 - 32675973
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||||   |||||||||||||||| || |||||||||| || ||||||  || | ||| ||||||| ||||||  ||||||||||||||    
T  32675869 ataagttctcactaatgaaaattgtatcttcataagttattttttcataaacaaccttacgaagcttatgaataataaataaaagcttatttatttgcat 32675968  T
Q  337 aagtt 341  Q
    |||||    
T  32675969 aagtt 32675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 10184329 - 10184411
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||| ||||||||||||||||||||||| |||||||||| || | ||||||||||| ||||||  |||||||||| ||||||    
T  10184329 aattgtttcttcataaattgttttttcataaactaccttaa-aaacttataaataatagataaaaacttatttatttacataag 10184411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 6632738 - 6632661
Alignment:
Q  264 cttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||| ||||||||||||| ||||| |||||||   ||||||||||||||||||   ||||||||||||||||||    
T  6632738 cttcataagttgttttttcataaactacattaacaagtttataaataatacataaaagcatatttatttgcataagtt 6632661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 1468254 - 1468180
Alignment:
Q  263 tcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||| ||||||| |||| |||||||||| || ||||||||||||||||||||  |||||||||||||||||    
T  1468254 tcttcataaactgttttt-cataaactaccttaaaaa-cctataaataatacataaaaacttatttatttgcataag 1468180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 340
Target Start/End: Complemental strand, 2255821 - 2255737
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagt 340  Q
    ||||||||||||||||  |||||||||||| | ||||||||||| | ||| ||| ||||||||||  | ||||||||||||||||    
T  2255821 aattgtatcttcataagctgttttttcataaattaccttaacaagcttatgaatcatacataaaagctcatttatttgcataagt 2255737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 341
Target Start/End: Original strand, 29623485 - 29623561
Alignment:
Q  265 ttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||| ||||||||||||| ||||| ||||||| |  |||||||||| ||||||  |||||||||||||||||||    
T  29623485 ttcataagttgttttttcataaactacattaacaaactcataaataataaataaaaggttatttatttgcataagtt 29623561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 7267862 - 7267779
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||| |||||||| ||||||||||||| ||||||||  ||| | ||| ||||||||||||||  |||||| ||||||||||    
T  7267862 aattgtaccttcataagttgttttttcataaactaccttggcaagcttatgaataatacataaaagcttatttgtttgcataag 7267779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 32165260 - 32165366
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||| |||||||||||| ||||| |||| ||   ||||||||||||||||||  |||||||||| |||||  |  ||||||||  ||    
T  32165260 aattgtatcttcataaactgttttttcataaactactttaa-aaaattataaataatacataaaaacttatttattttcataaactctaaaataagctaa 32165358  T
Q  356 tccaaacg 363  Q
    ||||||||    
T  32165359 tccaaacg 32165366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 4808657 - 4808576
Alignment:
Q  257 attgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||| |||||||||||| |||| ||||| || | |||||||||||||| |||  | |||||||||||||||    
T  4808657 attgtatcttcataaactgttttttcataaactatcttaa-aaacttataaataatacatgaaaactcatttatttgcataag 4808576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 339
Target Start/End: Complemental strand, 10054484 - 10054385
Alignment:
Q  238 taagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    ||||||| |||||||   ||||||||||  ||||||| |||||||||| ||||| || |||| | ||| ||||||||||||||  |||||||||||||||    
T  10054484 taagttcccactaatgaaaattgtatct--ataaattattttttcataaactacatttacaaacttatgaataatacataaaagcttatttatttgcata 10054387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 16589833 - 16589756
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||||||||||||||||||||| ||| | || |||| | ||| |||||||||||||| || |||||||| |||||    
T  16589833 tatcttcataaattgttttttcataaactcctttgacaaacttatgaataatacataaaaattaatttatttacataa 16589756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 16605547 - 16605624
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||||||||||||||||||||| ||| | || |||| | ||| |||||||||||||| || |||||||| |||||    
T  16605547 tatcttcataaattgttttttcataaactcctttgacaaacttatgaataatacataaaaattaatttatttacataa 16605624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 34413406 - 34413341
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaat 321  Q
    |||||||| || |||||||||||||||||| ||||| || |||| | |||||||||||||||||||    
T  34413406 aattgtatgtttataaattgttttttcataaactacatttacaaacttataaataatacataaaat 34413341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 24625937 - 24625857
Alignment:
Q  257 attgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    |||||||||||||||  |  ||||||||| ||||||||||||| | ||| ||||||||||||||   ||||||||||||||    
T  24625937 attgtatcttcataagctaatttttcataaactaccttaacaagcttatgaataatacataaaagcgtatttatttgcata 24625857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 6776911 - 6776812
Alignment:
Q  240 agttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||   | |||||||||||||| || ||||| |||| ||||||||||||| | |||  ||| || ||||||  |||||||||||||||||    
T  6776911 agttctcactaatgaaatttgtatcttcataagttatttttccataaactaccttaacaagcttatggatattaaataaaagcttatttatttgcataag 6776812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 9894833 - 9894770
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||| | ||||||||||| | ||||||||||||||||||  |||||||||||| ||||    
T  9894833 ttttttcataaaataccttaacaaacttataaataatacataaaagattatttatttgcgtaag 9894770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 17915012 - 17914950
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||| |||||||||| || | |||||||||||||||||| | ||||||||||||||||    
T  17915012 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataag 17914950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 363
Target Start/End: Original strand, 2027156 - 2027282
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||| ||||| |  | ||||||||||||||  |||||||||||| |||  ||| |||| | | | |||||| |||||||  ||||||||||||||    
T  2027156 ataagttcttactaacaaaagttgtatcttcataagctgttttttcataaactgtcttgacaaacttctgaataatgcataaaagcttatttatttgcat 2027255  T
Q  337 aagtttaaaaataagtcaatccaaacg 363  Q
    ||| |  |||| ||| |||||||||||    
T  2027256 aagctggaaaacaagccaatccaaacg 2027282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 9582502 - 9582540
Alignment:
Q  303 tataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  9582502 tataaataatacataaaaatttatttatttgcataagtt 9582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 10619312 - 10619254
Alignment:
Q  258 ttgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat 316  Q
    |||||| ||||||| ||||||||||||| ||||||||||||| | || |||||||||||    
T  10619312 ttgtatattcataagttgttttttcataaactaccttaacaaacttacaaataatacat 10619254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 362
Target Start/End: Original strand, 10755299 - 10755385
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    ||||||||||   |||||| |||| | ||| |||||||| |||||  ||||||||||||||||| | ||||||||| ||||||||||    
T  10755299 ttttttcataagttaccttgacaagcttatgaataatacgtaaaagcttatttatttgcataagctaaaaaataagccaatccaaac 10755385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 21025129 - 21025183
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    |||||||||||||||||||  | ||||| |||||||| |||||||||||||||||    
T  21025129 gtttggattgatttattttttagcttatcaaaaatagcttatgcaaataaataag 21025183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 34801030 - 34801131
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||||   |||||||||| | ||  ||||||||||||| |||| |||| ||| | ||| ||||||| |||||| ||||||||||| |||    
T  34801030 ataagttctcactaattaaaattgtatctccgtaggttgttttttcataaactatcttaccaa-cttatgaataataaataaaagtttatttatttacat 34801128  T
Q  337 aag 339  Q
    |||    
T  34801129 aag 34801131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 34223524 - 34223609
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||| |||||||| ||| | ||  | ||||| | ||||||||| ||||||||  |||||||||| ||||||||    
T  34223524 aattgtatcttcataaactgtttttttatagaatatataaacaaacttataaataacacataaaaacttatttattttcataagtt 34223609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 1240585 - 1240693
Alignment:
Q  232 aataaataagttctcactaatagtaattgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttat 330  Q
    |||| |||| |||||||||||   ||| |||||||||||| ||||||||| | || | |||||| |||| | ||| ||||||||||||||  ||||||||    
T  1240585 aatacataaattctcactaatgaaaatcgtatcttcataagttgtttttttcgtaaattaccttgacaagcttatgaataatacataaaagcttatttat 1240684  T
Q  331 ttgcataag 339  Q
    ||| |||||    
T  1240685 ttgaataag 1240693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 6758733 - 6758629
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    | ||||||||| |||| ||  ||||||||| ||||||||||||| | |||  |||||| | ||||  ||||||||||||||    
T  6758733 ataagttctcactaacgaaatttgtatcttgataagttaatttttcataaactaccttaacaagcttatggataataaacaaaagcttatttatttgcat 6758634  T
Q  337 aagtt 341  Q
    |||||    
T  6758633 aagtt 6758629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 10874071 - 10873990
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||||  |||||| ||||| ||||||||||||| | ||| ||||||  ||||||  |||||||| ||||||||    
T  10874071 aattgtatcttcataagctgttttctcataaactaccttaacaagcttattaataat--ataaaagcttatttatatgcataag 10873990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 21871194 - 21871250
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    ||||||||||| |||||||  | ||||| ||||||||||||| ||||||||||||||    
T  21871194 gtttggattgacttattttttagcttatgaaaaatagtttatacaaataaataagtt 21871250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 12816810 - 12816865
Alignment:
Q  186 tgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    |||||||||| | |||||||  | ||||| ||||||||||||||||||||||||||    
T  12816810 tgtttggattaacttatttttgagcttatgaaaaatagtttatgcaaataaataag 12816865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 21610048 - 21610131
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||| ||| |||||||| | |||||||||| ||||| ||||||| | |||||||||| ||||||    ||||||||||||||||    
T  21610048 aattatatattcataaactattttttcataaactacattaacaagcttataaataattcataaagaaatatttatttgcataag 21610131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 21891337 - 21891420
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||| ||||||||||| ||||| ||||||| ||||| || |||| | ||| ||||||| || |||  |||||||||||||||||    
T  21891337 aattctatcttcataagttgttatttcataaactacattgacaagcttatgaataatatatcaaaacttatttatttgcataag 21891420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 24419524 - 24419563
Alignment:
Q  323 ttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  24419524 ttatttatttgcataagtttaaaaataagctaatccaaac 24419563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 4272469 - 4272387
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||| |||| |||||||||||||| ||| ||||| || | || | |||  |||||||||||||  ||||||||||||||||    
T  4272469 aattgtttctttataaattgtttttttataaactacatttataaacttatgtataatacataaaaagttatttatttgcataa 4272387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 366
Target Start/End: Original strand, 7576860 - 7576970
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||| |||||||||||| |||||||| ||| | ||  ||||||| | ||| ||||||  ||||   |||||| |||| |||||||| |||||||||||||    
T  7576860 aattatatcttcataaactgtttttttataaattatgttaacaagcttatgaataattgataacggtttattcatttccataagttcaaaaataagtcaa 7576959  T
Q  356 tccaaacgagc 366  Q
      |||||||||    
T  7576960 aacaaacgagc 7576970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 30534046 - 30533984
Alignment:
Q  277 tttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||| ||||| || |||| | ||| ||||||||||||||  |||||||||||||||||    
T  30534046 tttttcataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataag 30533984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 338
Target Start/End: Original strand, 10730252 - 10730318
Alignment:
Q  268 ataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||| |||||||||||| ||||| |||||||   |||||||||||||||||    |||||||||||||||    
T  10730252 ataaactgttttttcataaactacattaacaagtttataaataatacataaa----tatttatttgcataa 10730318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 10755194 - 10755247
Alignment:
Q  188 tttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    |||||||||| |||||||  | ||| | ||||||||||||||||||||||||||    
T  10755194 tttggattgacttatttttgagcttctgaaaaatagtttatgcaaataaataag 10755247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 10874097 - 10874146
Alignment:
Q  313 acataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    ||||||||  ||||||||||||||||| | |||||||||||| |||||||    
T  10874097 acataaaagcttatttatttgcataagctaaaaaataagtcattccaaac 10874146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 17300785 - 17300822
Alignment:
Q  304 ataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||||  |||||||||||||||||||    
T  17300785 ataaataatacataaaaacttatttatttgcataagtt 17300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 15054584 - 15054644
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat 316  Q
    |||||||||||||||||||| ||||||||| | ||| || |||| | ||||| ||||||||    
T  15054584 aattgtatcttcataaattgctttttcataaaatacttttacaaacttataactaatacat 15054644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 23239353 - 23239249
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    | ||||||| |||||| ||| ||||| ||| || || ||||||| | ||| ||||||| ||||||  ||||||||||| ||    
T  23239353 ataagttctcactaaggaaagttgtatcgtcataatttgctttttgataaaccacgttaacaagcttatgaataataaataaaagcttatttatttgtat 23239254  T
Q  337 aagtt 341  Q
    |||||    
T  23239253 aagtt 23239249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 28758362 - 28758402
Alignment:
Q  298 aatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||| ||| |||||||||||||| |||||||||||||||||    
T  28758362 aatcttatgaataatacataaaaatttatttatttgcataa 28758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 43079933 - 43080038
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  |||||||||||| |||||||| |||| | ||| ||||| ||||||||  ||||||||||||||||| | ||||||||| |||    
T  43079933 aattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataacacataaaagcttatttatttgcataagctaaaaaataagacaa 43080032  T
Q  356 tccaaa 361  Q
    ||||||    
T  43080033 tccaaa 43080038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 53218020 - 53218124
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||||||||||||| || ||||||||||||| |||||||| |||| | ||| ||||||||||||||| ||||||||| ||||    
T  53218020 ataagttctcactaacgaaaattgtatcttcaaaagttgttttttcataaactaccttgacaagcttatgaataatacataaaatcttatttattcgcat 53218119  T
Q  337 aagtt 341  Q
    |||||    
T  53218120 aagtt 53218124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 48597866 - 48597973
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||||||||||||||| |||||||||||||||||||||  |||| | ||| ||||||  |||||| ||||| |||||||||| | | ||||||||| |||    
T  48597866 aattgtatcttcataagttgttttttcatacactacctcgacaaacttatgaataatttataaaagtttatgtatttgcataggctaaaaaataagccaa 48597965  T
Q  356 tccaaacg 363  Q
    ||||||||    
T  48597966 tccaaacg 48597973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 235 - 362
Target Start/End: Complemental strand, 52021355 - 52021227
Alignment:
Q  235 aaataagttctcactaatagtaattgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttatttg 333  Q
    |||||||||||||||||    |||| |||||||||||  |||||||| |||| |||||||| |||||| ||| ||||||||||||||   ||||||||||    
T  52021355 aaataagttctcactaacgaaaattatatcttcataagctgtttttttcataaactaccttgacaatcttatgaataatacataaaagcatatttatttg 52021256  T
Q  334 cataagtttaaaaataagtcaatccaaac 362  Q
    |||||| | |||||| || ||||||||||    
T  52021255 cataagctaaaaaatgagccaatccaaac 52021227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 45331294 - 45331401
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  |||||||||||| |||  |||||||| | |||  |||||||||||||  |||||||||| |||||| | ||||||||| |||    
T  45331294 aattgtatcttcataagatgttttttcataaactgtcttaacaagcttatgcataatacataaaaggttatttatttacataagctaaaaaataagccaa 45331393  T
Q  356 tccaaacg 363  Q
    ||||||||    
T  45331394 tccaaacg 45331401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 1516078 - 1516181
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||||   ||||||||||| ||||| || |||| |||| | ||||||||||| | |||||||||||||| |||| ||||||||||| ||    
T  1516078 ataagttctcactaatgaaaattgtatctttataaactgattttccataaaataccttaacaaacttataaataatacat-aaatgttatttatttgaat 1516176  T
Q  337 aagtt 341  Q
    |||||    
T  1516177 aagtt 1516181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 2086689 - 2086773
Alignment:
Q  255 taattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||||| | |||||||||| || ||||| ||||   |||||||||||||||||| ||||||||||| ||||||    
T  2086689 taattgtatcttcataaactattttttcataaaccacctttacaagattataaataatacataaaagtttatttatttacataag 2086773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 4257299 - 4257385
Alignment:
Q  256 aattgtatcttcataaattgtttttt--catacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||| ||||||||  |||| |||||||||| || | ||||||||||||||||||  |||||||||||||||||||    
T  4257299 aattgtatcttcataaactgttttttttcataaactaccttaaaaa-cttataaataatacataaaaacttatttatttgcataagtt 4257385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 30473151 - 30473223
Alignment:
Q  265 ttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    ||||||| ||||||||||||| ||||||||||||| | |||||||||||||| ||  ||||||||||||||||    
T  30473151 ttcataagttgttttttcataaactaccttaacaaccttataaataatacattaatgtttatttatttgcata 30473223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 29614280 - 29614198
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||   ||||||||||||||||||  |||||||||| ||||||    
T  29614280 aattgtatcttcataaactgttttttcataaactaccttaa-aaaattataaataatacataaaaacttatttatttacataag 29614198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 52421140 - 52421246
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||||||||||||| || | |||||||||| |||||||| |||| | ||| ||||||||||||||  |||||||||||| |||| || |||||||| |||    
T  52421140 aattgtatcttcattaactattttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcgtaagctt-aaaataagccaa 52421238  T
Q  356 tccaaacg 363  Q
    | ||||||    
T  52421239 tacaaacg 52421246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 30243383 - 30243449
Alignment:
Q  47 cccaattgcaaccttgtacctcatagaccaagggagtgtcgaactaccattcccaccgttcttcctc 113  Q
    ||||| ||||||||||||||| | ||||||||||||||| |||||||| |||||||| |||||||||    
T  30243383 cccaactgcaaccttgtacctaacagaccaagggagtgttgaactacccttcccacctttcttcctc 30243449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 10448853 - 10448776
Alignment:
Q  264 cttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||| |||||||||||| ||||| ||||||| | |||||||||||||||||    ||||||||||||||||||    
T  10448853 cttcataaactgttttttcataaactacattaacaagcttataaataatacataaaggcatatttatttgcataagtt 10448776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 37456433 - 37456508
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    ||||||||||| ||||||| |||||||||| |||| ||||| || | |||||||||||||||||| |||||||||||    
T  37456433 aattgtatctttataaattattttttcataaactatcttaaaaa-cttataaataatacataaaaatttatttattt 37456508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 37601035 - 37601131
Alignment:
Q  265 ttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaa 361  Q
    ||||||| |||||| |  ||| |||| |||||||| | |||||||||||||| ||  |||||||||||||||||| |  ||||||||||||||||||    
T  37601035 ttcataagttgtttctctataaactatcttaacaagcttataaataatacattaacgtttatttatttgcataagctctaaaataagtcaatccaaa 37601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 3645389 - 3645307
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||| || |||||||||||| |||||||||| ||   ||||||||||||||||||  |||||||||| ||||||    
T  3645389 aattgtatcttcatgaactgttttttcataaactaccttaa-aaaattataaataatacataaaaacttatttatttacataag 3645307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 40240576 - 40240659
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||| ||||||||||||| |||||||  |||  | ||| ||||||||||||||  || ||||||||||||||    
T  40240576 aattgtatcttcataagttgttttttcataaactacctagacacgcttatgaataatacataaaagcttctttatttgcataag 40240659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 51409480 - 51409397
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||| ||||||||||| ||||||||||||| |||||||| |||| |  || ||||||| ||||||  |||||||||||||||||    
T  51409480 aattttatcttcataagttgttttttcataaactaccttgacaaactcatgaataataaataaaagattatttatttgcataag 51409397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 585107 - 585025
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||| ||||||||||||| ||||||| || || | | | |||||| |||||||  ||||||||||||||||    
T  585107 aattgtatcttcataagttgttttttcataaactacctcaagaagcttttgaataatgcataaaagcttatttatttgcataa 585025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 28741194 - 28741296
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||||||| ||||||||  |||||||||||| ||||| ||||||| | ||||| |||||||||||    |||||||||||||    
T  28741194 ataagttctcactaacgaaaattgtaccttcataatctgttttttcataaactactttaacaagcttataagtaatacataaaggaatatttatttgcat 28741293  T
Q  337 aag 339  Q
    |||    
T  28741294 aag 28741296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 38524175 - 38524069
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||| || |||||||||  |||||||||| |||||||||||||   |||||||||||||| ||   ||||||||||||||||  |  ||||||||| ||    
T  38524175 aattgcatattcataaatgattttttcataaactaccttaacaaatttataaataatacattaatacttatttatttgcataaactctaaaataagttaa 38524076  T
Q  356 tccaaac 362  Q
    |||||||    
T  38524075 tccaaac 38524069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 338
Target Start/End: Complemental strand, 36266298 - 36266249
Alignment:
Q  289 taccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  36266298 taccttaacaaacttataaataatacataaaagtttatttatttgcataa 36266249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 40581096 - 40581161
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||| |||||||| |||| | ||| ||||||||||||||  |||||||||||||||||||    
T  40581096 ttttttcataaactaccttgacaagcttattaataatacataaaagcttatttatttgcataagtt 40581161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 4974397 - 4974315
Alignment:
Q  257 attgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||| ||||||| ||||||||||||| ||||||||| |||   |||||||||||||| |    |||||||||||||||||    
T  4974397 attgtatattcataacttgttttttcataaactaccttagcaagtttataaataatacattagtgcttatttatttgcataag 4974315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 24842106 - 24842191
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactacctta-acaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||| |||||||| |||| | ||| ||  |||| | ||| |||||||||||||| ||||||||||||||||||||    
T  24842106 aattgtatcttcataagttgttttt-cataaattacatttgacaaacttatgaataatacataaaaatttatttatttgcataagtt 24842191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 29830793 - 29830851
Alignment:
Q  280 ttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||| ||||||||||||| | |||| |||||||||||||  ||||||||||||||||    
T  29830793 ttcataaactaccttaacaaacatatagataatacataaaaacttatttatttgcataa 29830851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 30917513 - 30917575
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||| ||| || ||||||| |||  |||||||||||||||||| |||||||||||||||||    
T  30917513 tttttttataaacaaccttaataattttataaataatacataaaaatttatttatttgcataa 30917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 341
Target Start/End: Complemental strand, 10667509 - 10667400
Alignment:
Q  232 aataaataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatt 331  Q
    |||| ||||||| ||||||| |  | || |||||||||||| |||| ||||||| ||||| || |||| | ||| ||||||||||| ||  |||||||||    
T  10667509 aatatataagttttcactaacaaaagttatatcttcataaaatgttgtttcataaactacattgacaagcttatgaataatacatataagcttatttatt 10667410  T
Q  332 tgcataagtt 341  Q
    ||| ||||||    
T  10667409 tgcgtaagtt 10667400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 30243592 - 30243653
Alignment:
Q  115 caaaaacataccctcctcggggtcaatacaaaaagcaacaaatggaacaacatttgcactat 176  Q
    |||||||| ||||||||| ||||||||||||||| ||||||  ||||||| ||||| |||||    
T  30243592 caaaaacaaaccctcctcagggtcaatacaaaaaccaacaagaggaacaatatttggactat 30243653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 34707712 - 34707797
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||| | |  |||||||||||| ||||||||||||| | ||| ||||||||||||||  |||| ||||| | ||||||    
T  34707712 aattgtatcttcgttagctgttttttcataaactaccttaacaagcttatgaataatacataaaagcttatatatttacgtaagtt 34707797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 361
Target Start/End: Original strand, 3870206 - 3870330
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||| ||||   || |||||| |||||  ||||||||||||| |||||||| |||| | ||| || || ||||||||  |||||| |||||||    
T  3870206 ataagttctcattaatgaaaagtgtatcatcatatgttgttttttcataaactaccttgacaagcttatgaacaaaacataaaagcttatttttttgcat 3870305  T
Q  337 aagtttaaaaataagtcaatccaaa 361  Q
    ||| |  | |||||| |||||||||    
T  3870306 aagctcgataataagccaatccaaa 3870330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 22809192 - 22809276
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat-aaaattttatttatttgcataag 339  Q
    ||||||||||||||||   ||||||||||| |||||||| |||| | ||| ||||||| || ||||  |||||||||||||||||    
T  22809192 aattgtatcttcataagcagttttttcataaactaccttgacaagcttatgaataatatataaaaagcttatttatttgcataag 22809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 366
Target Start/End: Original strand, 35480447 - 35480491
Alignment:
Q  322 tttatttatttgcataagtttaaaaataagtcaatccaaacgagc 366  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||    
T  35480447 tttatttatctgcataagctaaaaaataagtcaatccaaacgagc 35480491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 20894589 - 20894507
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||| || |||||||||| | ||||| |||| ||   ||||||||||||||||||  |||||||||| ||||||    
T  20894589 aattgtatcttcatgaactgttttttcaaaaactacattaaaaaat-tataaataatacataaaaacttatttatttacataag 20894507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 29002891 - 29002836
Alignment:
Q  186 tgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    |||||||||| | |||||||  | ||||||||||||| ||||||||||||||||||    
T  29002891 tgtttggattaacttatttttgagcttataaaaaatactttatgcaaataaataag 29002836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 338
Target Start/End: Complemental strand, 30500006 - 30499971
Alignment:
Q  303 tataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||| |||||||||||||||||    
T  30500006 tataaataatacataaaaatttatttatttgcataa 30499971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 37243572 - 37243493
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat 316  Q
    |||||||||||| |||   || |||| ||||||||| | |||||||||| ||||| ||||||| | ||||||||||||||    
T  37243572 ataagttctcaccaatgaaaagtgtaccttcataaactattttttcataaactacgttaacaagcttataaataatacat 37243493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 320
Target Start/End: Complemental strand, 37778239 - 37778157
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa 320  Q
    ||||||||||||||| |  ||||||||||||||||    |||||||||| |||||||||| |||  | ||||||||||||||||    
T  37778239 ataagttctcactaacaaaaattgtatcttcataaccgattttttcataaactaccttaaaaat-ttctaaataatacataaaa 37778157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 332
Target Start/End: Original strand, 43971827 - 43971922
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    |||||||||||||||    |||| ||||||||||||||||||| ||||| ||||  ||||||| | | | ||||||| ||||||  ||||||||||    
T  43971827 ataagttctcactaacgaaaattttatcttcataaattgttttctcataaactattttaacaaacttgtgaataataaataaaagcttatttattt 43971922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 363
Target Start/End: Original strand, 45049385 - 45049480
Alignment:
Q  268 ataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    |||| ||||||| ||||| ||||||||||||| | |||||| |||| || ||   || |||||||| ||||  || ||||||||||||||||||||    
T  45049385 ataagttgttttgtcataaactaccttaacaaacttataaacaatatattaatgcttgtttatttgtataaactttaaaataagtcaatccaaacg 45049480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 10521236 - 10521162
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgca 335  Q
    |||||||||||| |||| ||||||| ||||| || |||| | ||| ||||||||||| ||  |||||||||||||    
T  10521236 tatcttcataaaatgttgtttcataaactacattgacaagcttatgaataatacatataagcttatttatttgca 10521162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 28623280 - 28623318
Alignment:
Q  303 tataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  28623280 tataaataatacataaaaacttatttatttgcataagtt 28623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 11528978 - 11528893
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||| ||||||||||| || |||| ||||| ||||| |||||||   ||| ||||||||||||||  ||||||| || ||||||||    
T  11528978 aattatatcttcataattttttttatcataaactacattaacaaatttatgaataatacataaaagcttatttacttacataagtt 11528893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Complemental strand, 17383559 - 17383510
Alignment:
Q  289 taccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||| |||||| | |||||||| |||||||||| ||||||||||||||||    
T  17383559 taccctaacaaacttataaatattacataaaatcttatttatttgcataa 17383510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 20894655 - 20894622
Alignment:
Q  210 cttataaaaaatagtttatgcaaataaataagtt 243  Q
    |||||||||||||||||||| |||||||||||||    
T  20894655 cttataaaaaatagtttatgtaaataaataagtt 20894622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 29270463 - 29270512
Alignment:
Q  313 acataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    ||||||||  ||||||||||||||||| | ||||||||| ||||||||||    
T  29270463 acataaaagcttatttatttgcataagctaaaaaataagccaatccaaac 29270512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Complemental strand, 51662877 - 51662808
Alignment:
Q  270 aaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||| |||||||||| |||| |||||||| | |||||||||||||| ||  ||||| |||||| |||||    
T  51662877 aaattattttttcataaactatcttaacaagcttataaataatacattaatgtttatctatttgtataag 51662808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 341
Target Start/End: Complemental strand, 7292762 - 7292682
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||| ||||||| |||||||||||| ||||  || |||| | ||| |||||||||||| |  |||| ||||||||||||||    
T  7292762 tatcatcataaactgttttttcataaactatattgacaaacttatgaataatacataagagcttatgtatttgcataagtt 7292682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 20174939 - 20174999
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat 316  Q
    |||||||| ||||||| ||||||||||||| |||| |||| |||   ||||||||||||||    
T  20174939 aattgtatattcataagttgttttttcataaactaacttagcaagtttataaataatacat 20174999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 20685889 - 20685837
Alignment:
Q  239 aagttctcactaatagtaattgtatcttcataaattgttttttcatacactac 291  Q
    ||||||||||||||   |||||||||||||||| ||||||||| ||| |||||    
T  20685889 aagttctcactaatgaaaattgtatcttcataagttgttttttgataaactac 20685837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 30383855 - 30383795
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat 316  Q
    |||||||| ||||||  ||||||||||||| |||||||||||||   ||||||||| ||||    
T  30383855 aattgtatattcataggttgttttttcataaactaccttaacaaatttataaataacacat 30383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 32901128 - 32901232
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    |||| ||||||||||| ||||||| | ||| |||| ||||||||   | | ||||||| ||||||  |||||||||| |||    
T  32901128 ataagttctcactaacgaaaattttatcttcataagttgttttcttataaactatcttaacaaatttgtgaataataaataaaagcttatttatttacat 32901227  T
Q  337 aagtt 341  Q
    |||||    
T  32901228 aagtt 32901232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 41601344 - 41601412
Alignment:
Q  270 aaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||| |||||||| |||| |||||||| | ||  ||||||||||||||  | ||||||||||||||    
T  41601344 aaattgtattttcataaactaacttaacaaacttaagaataatacataaaaactgatttatttgcataa 41601412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 42363299 - 42363398
Alignment:
Q  239 aagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||||||||| |  |||||||||||||||||  ||||||||||| |||||||||| || | ||||||||||||||||||  ||||||||||||||||    
T  42363299 aagttctcactaacaaaaattgtatcttcataaacggttttttcataaactaccttaa-aaacttataaataatacataaaaacttatttatttgcataa 42363397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 38895745 - 38895663
Alignment:
Q  257 attgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||||| |||||| ||||||| ||||||||||    
T  38895745 attgtatcttcataaattattttttcataaactaccttaacaagcttatgaataataaataaaagtttatttttttgcataag 38895663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 363
Target Start/End: Complemental strand, 28879139 - 28879038
Alignment:
Q  262 atcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaa 361  Q
    |||||||||| ||||| ||||||| |||||||| |||| | ||| ||||||||||||||  ||||||||||||||||| | ||||||||| |||| ||||    
T  28879139 atcttcataagttgttatttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataagctcaaaaataagccaattcaaa 28879040  T
Q  362 cg 363  Q
    ||    
T  28879039 cg 28879038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 237 - 337
Target Start/End: Complemental strand, 12607185 - 12607086
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||| |||||||||  | |||||||||||||||||  ||||||||||| |||||||||| || | ||||||||||||||||||  ||||||||||||||    
T  12607185 ataagctctcactaacggaaattgtatcttcataaaccgttttttcataaactaccttaa-aaacttataaataatacataaaaacttatttatttgcat 12607087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 19925644 - 19925561
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||||||||||||||| || | ||||||||||| | |||||||||||  |||||  |||||||||||||||||    
T  19925644 aattgtatcttcataaattgttttttcgtaaaataccttaacaaacttataaataataattaaaagcttatttatttgcataag 19925561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 2669732 - 2669630
Alignment:
Q  259 tgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatcc 358  Q
    ||||| ||||||| ||||||||||||| ||||||||||||| | |||||||||||||| | |  ||||||||||||||||| |  |||||||  ||||||    
T  2669732 tgtatattcataagttgttttttcataaactaccttaacaaacttataaataatacattagagcttatttatttgcataagctataaaataaaccaatcc 2669633  T
Q  359 aaa 361  Q
    |||    
T  2669632 aaa 2669630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 32975793 - 32975691
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||| || |  |||||||||||||||| |||| |||||||| |||||||| |||| | ||| ||||||| ||||||  ||||||||||||||    
T  32975793 ataagttctcacaaacaaaaattgtatcttcataagttgtgttttcataaactaccttgacaagcttatgaataatatataaaagcttatttatttgcat 32975694  T
Q  337 aag 339  Q
    |||    
T  32975693 aag 32975691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 34286563 - 34286668
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  ||||||| || | |||||||| |||| | ||| ||||||||||||||  |||||||||| |||||| | |||||||||||||    
T  34286563 aattgtatcttcataagctgttttt-cacaaactaccttgacaagcttatgaataatacataaaagcttatttatttacataagctcaaaaataagtcaa 34286661  T
Q  356 tccaaac 362  Q
    |||||||    
T  34286662 tccaaac 34286668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 2563464 - 2563363
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||| ||| |||||||  |||||||| |||| || ||||||||||||| ||||| ||||||| | |||||||||||||| ||  |||||||||||||||    
T  2563464 ataagatcttactaataaaaattgtatattcaaaagttgttttttcataaactactttaacaaacttataaataatacattaatatttatttatttgcat 2563365  T
Q  337 aa 338  Q
    ||    
T  2563364 aa 2563363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 19327972 - 19327869
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||| ||| |  ||||||||||| ||||| ||||||| |||| ||||| ||| ||| | ||| |||||||||||||| |||||||||||||||    
T  19327972 ataagttctcattaacaaaaattgtatctttataaactgtttttccataaactacatta-caaacttatgaataatacataaaagtttatttatttgcat 19327874  T
Q  337 aagtt 341  Q
    |||||    
T  19327873 aagtt 19327869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 42102193 - 42102111
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||| ||  ||||||||||| |||||||||| || | ||||||||||||||||||  |||||||||||||||||    
T  42102193 aattgtatcttcattaacggttttttcataaactaccttaaaaa-cttataaataatacataaaaacttatttatttgcataag 42102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 218253 - 218333
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||| |||||| |||| |||||||||| || | |||||||||||||||||| ||||||||||| |||||    
T  218253 aattgtatcttcataaatagttttt-cataaactaccttaaaaa-cttataaataatacataaaaatttatttatttacataa 218333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 694813 - 694893
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||| |||||| |||| |||||||||| || | |||||||||||||||||| ||||||||||| |||||    
T  694813 aattgtatcttcataaatagttttt-cataaactaccttaaaaa-cttataaataatacataaaaatttatttatttacataa 694893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 699022 - 699102
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||| |||||| |||| |||||||||| || | |||||||||||||||||| ||||||||||| |||||    
T  699022 aattgtatcttcataaatagttttt-cataaactaccttaaaaa-cttataaataatacataaaaatttatttatttacataa 699102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 731876 - 731956
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||| |||||| |||| |||||||||| || | |||||||||||||||||| ||||||||||| |||||    
T  731876 aattgtatcttcataaatagttttt-cataaactaccttaaaaa-cttataaataatacataaaaatttatttatttacataa 731956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 855772 - 855852
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||| |||||| |||| |||||||||| || | |||||||||||||||||| ||||||||||| |||||    
T  855772 aattgtatcttcataaatagttttt-cataaactaccttaaaaa-cttataaataatacataaaaatttatttatttacataa 855852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 363
Target Start/End: Original strand, 10298906 - 10299032
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||| ||| |  ||||||||||||||||  |||||||||||| |||||||| |||| | ||| ||| ||||| |||| || ||||||||||||    
T  10298906 ataagttctcattaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaatgatacaaaaaagttaatttatttgcat 10299005  T
Q  337 aagtttaaaaataagtcaatccaaacg 363  Q
    ||  | || || ||| |||||||||||    
T  10299006 aaactcaacaagaagccaatccaaacg 10299032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 11988283 - 11988202
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||  ||||||||||  |||||||||| || | ||||||||||||||||||  ||||||||||||||||    
T  11988283 aattgtatcttcataaacggttttttcatgaactaccttaaaaa-cttataaataatacataaaaacttatttatttgcataa 11988202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 35168440 - 35168526
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttattt-atttgcataagtt 341  Q
    ||||||||||||||||| |||||||||||| |||||||| |||| | ||| ||||||||||||||  ||||||  ||||||||||||    
T  35168440 aattgtatcttcataaactgttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttgttttgcataagtt 35168526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 35453488 - 35453392
Alignment:
Q  265 ttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaa 361  Q
    |||||||  |||||||||||| |||||||| | || | ||| ||||||||||||||  ||||||||||||||||| | ||||||||| |||| ||||    
T  35453488 ttcataagctgttttttcataaactaccttgataaacttatgaataatacataaaagcttatttatttgcataagctaaaaaataagccaattcaaa 35453392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 357
Target Start/End: Original strand, 32213043 - 32213122
Alignment:
Q  278 ttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatc 357  Q
    |||||||| |||| | | |||| | ||| ||||||||||||||  ||||||||||||||||| |||||||||||||||||    
T  32213043 ttttcataaactaacctgacaagcttatgaataatacataaaagcttatttatttgcataagcttaaaaataagtcaatc 32213122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 28280788 - 28280690
Alignment:
Q  264 cttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    |||||||||  ||||||||||| ||||| ||||||| | |||||||||||||||||    |||||||||||||||| |  ||||||||  |||||||||    
T  28280788 cttcataaacagttttttcataaactacattaacaaacttataaataatacataaatgcatatttatttgcataagctctaaaataagctaatccaaac 28280690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 32131546 - 32131444
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||| |   |||||||||||||||  |||||| |||||| |||||||| |||| | ||  |||||| |||||||  ||||||||||||||    
T  32131546 ataagttctcactattgaaaattgtatcttcataggttgtttattcataaactaccttgacaaacttaggaataatgcataaaagcttatttatttgcat 32131447  T
Q  337 aag 339  Q
    |||    
T  32131446 aag 32131444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 37410912 - 37410993
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||| || |||||||||||| |||||||||| ||   ||||||||||||||||||  |||||||||| |||||    
T  37410912 aattgtatcttcatgaactgttttttcataaactaccttaa-aaaattataaataatacataaaaacttatttatttacataa 37410993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 8752912 - 8752787
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||| || |  | |||||||||| |||  |||||||||||| | ||| || |||  ||||  ||||||||| ||||  |||||| |||||||    
T  8752912 ataagttctcacaaacaaaatttgtatcttcttaagctgttttttcataaattactttgacacacctacgaataatacacaaaagcttatttctttgcat 8752813  T
Q  337 aagtttaaaaataagtcaatccaaac 362  Q
    || || ||||||||||||||||||||    
T  8752812 aaattaaaaaataagtcaatccaaac 8752787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 14942511 - 14942426
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||| |||||||||| | ||||||||||| |||| |||||||| | ||||||||||||| ||||  |||||||| | ||||||||    
T  14942511 aattgcatcttcataagtcgttttttcataaactaacttaacaagcttataaataatacacaaaagcttatttatatacataagtt 14942426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 24866950 - 24867011
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacata 317  Q
    ||||||| ||||||||  |||||||||||| ||||| ||||||||| |||||||||||||||    
T  24866950 aattgtaccttcataagctgttttttcataaactacattaacaatcttataaataatacata 24867011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 38195573 - 38195489
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||| | |||||| ||||||||| || |||||||||| || | ||||||||||| ||||||  |||||||||||||||||||    
T  38195573 aattgtatttccataaactgttttttcgtaaactaccttaaaaa-cttataaataatatataaaaacttatttatttgcataagtt 38195489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 14262413 - 14262330
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||   ||||||||| |||| ||   || ||||||||||||||    
T  14262413 aattgtatattcataagttgttttttcataaactaccttaacaaatttataaataacacattaatgcttctttatttgcataag 14262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 363
Target Start/End: Original strand, 41145376 - 41145504
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctat---aaataatacataaaattttatttatttg 333  Q
    ||||||||||||||||   ||| ||||||| | || ||||||||||||| ||||||||||||| | |||    ||||||| ||||||  |||||||||||    
T  41145376 ataagttctcactaatgaaaatcgtatcttta-aagttgttttttcataaactaccttaacaaacttatgaataataataaataaaagcttatttatttg 41145474  T
Q  334 cataagtttaaaaataagtcaatccaaacg 363  Q
    |||||| | ||||  | |||||||||||||    
T  41145475 cataagctcaaaatgatgtcaatccaaacg 41145504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 19925388 - 19925469
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||| ||||||| ||||| ||||||| |||||||||||||   |||||||||||||| ||   ||||||||||||||||    
T  19925388 aattgtatattcataagttgttatttcata-actaccttaacaagtttataaataatacattaatgcttatttatttgcataa 19925469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 38338855 - 38338932
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||| | |||||||||| |||||||||| || | |||||||||||  |||||  |||||||||||||||||    
T  38338855 tatcttcataaactattttttcataaactaccttaa-aaacttataaataatatttaaaaacttatttatttgcataag 38338932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 43577296 - 43577226
Alignment:
Q  268 ataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||| ||||||||| ||| |||||||||||||   |||||||||||||| ||  |||||||||||||||||    
T  43577296 ataagttgtttttttataaactaccttaacaaatttataaataatacattaatatttatttatttgcataa 43577226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 362
Target Start/End: Complemental strand, 9781257 - 9781196
Alignment:
Q  301 cctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    |||||||||||||||| ||   ||||||||||||||||| |  |||||||||||||||||||    
T  9781257 cctataaataatacattaatgcttatttatttgcataagctctaaaataagtcaatccaaac 9781196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 364
Target Start/End: Complemental strand, 1184870 - 1184762
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||||||| || | || ||||||||  ||| ||||||||||||| | | ||||| |||||| ||   ||||||||||||||||| || |||||||| |||    
T  1184870 aattgtatatttagaagttgtttttagataaactaccttaacaaacttttaaatgatacattaatgcttatttatttgcataagctttaaaataagccaa 1184771  T
Q  356 tccaaacga 364  Q
    | |||||||    
T  1184770 ttcaaacga 1184762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 3641287 - 3641231
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    |||||||||| ||||| ||||||| | ||||||| |||||||||| |||||||||||    
T  3641287 ttttttcatatactacattaacaaacttataaattatacataaaaatttatttattt 3641231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 9782270 - 9782210
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat 316  Q
    |||||||| ||||||| ||||||||| ||| ||||| ||||||| | ||||||||||||||    
T  9782270 aattgtatattcataagttgttttttaataaactactttaacaagcttataaataatacat 9782210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 14724975 - 14725058
Alignment:
Q  267 cataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataag 351  Q
    ||||| ||||||||||||| | ||| ||||||||| ||||||||||| ||||||   | |||||||||||||| || ||||||||    
T  14724975 cataagttgttttttcataaattacattaacaatcttataaataatatataaaa-gatctttatttgcataagctttaaaataag 14725058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 335
Target Start/End: Original strand, 16972355 - 16972435
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactacctta-acaatcctataaataatacataaaattttatttatttgca 335  Q
    ||||||||||||||||  |||||||||||  ||||||||| |||| | ||| ||||||||||| ||  |||||||||||||    
T  16972355 aattgtatcttcataagctgttttttcatgaactaccttagacaaacttatgaataatacatacaagcttatttatttgca 16972435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 338
Target Start/End: Complemental strand, 3664176 - 3664141
Alignment:
Q  303 tataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||||| |||||||||||||||||    
T  3664176 tataaataatacataaaaatttatttatttgcataa 3664141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 29243083 - 29243145
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||| ||| |||||||||| || | ||||||||||||||||||  |||||||||||||||||    
T  29243083 ttttttaataaactaccttaaaaa-cttataaataatacataaaagcttatttatttgcataag 29243145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 32924211 - 32924294
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||| ||||||||||| ||||||||||||| ||||| | ||||| | ||||||||| | ||||||   |||||||| |||||||    
T  32924211 aattttatcttcataagttgttttttcataaactacataaacaagcttataaataacaaataaaagcatatttattcgcataag 32924294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 9130990 - 9130940
Alignment:
Q  313 acataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    |||||||| |||||||||||||||||| | ||||  |||||||||||||||    
T  9130990 acataaaagtttatttatttgcataagctcaaaatcaagtcaatccaaacg 9130940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 13131619 - 13131565
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    ||||||||||| ||||||| || ||||| ||||||||  ||||||||||||||||    
T  13131619 gtttggattgacttatttttaagcttatgaaaaatagcatatgcaaataaataag 13131565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 28879231 - 28879177
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    ||||||||||| |||||||  | ||||| |||||||| |||||||||||||||||    
T  28879231 gtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataag 28879177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 10213756 - 10213707
Alignment:
Q  312 tacataaaattttatttatttgcataagtttaaaaataagtcaatccaaa 361  Q
    |||||||||  ||||||||||||||||| ||| ||||||| |||||||||    
T  10213756 tacataaaaacttatttatttgcataagcttagaaataagccaatccaaa 10213707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 41145329 - 41145362
Alignment:
Q  210 cttataaaaaatagtttatgcaaataaataagtt 243  Q
    ||||| ||||||||||||||||||||||||||||    
T  41145329 cttatgaaaaatagtttatgcaaataaataagtt 41145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 13265666 - 13265611
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    ||||||||| | ||||||| || ||||| ||||||| ||||||||||||||||||||    
T  13265666 gtttggattcacttatttttaagcttatgaaaaata-tttatgcaaataaataagtt 13265611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 30974076 - 30974016
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat 316  Q
    |||||||  ||||||| ||||||||||||| ||| |||||||||   ||||||||||||||    
T  30974076 aattgtaaattcataagttgttttttcataaactgccttaacaaatttataaataatacat 30974016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 238 - 362
Target Start/End: Complemental strand, 12223957 - 12223833
Alignment:
Q  238 taagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||| |||||||| |||  | ||| |||||||||| |||  ||| ||||||||| |    
T  12223957 taagttctcactaatgaaaatggtatcttcataaactgttttttcataaactaccttgacaggcttatgaataatacatgaaaggttacttatttgcaaa 12223858  T
Q  338 agtttaaaaataagtcaatccaaac 362  Q
    || ||||||||||| ||||||||||    
T  12223857 agcttaaaaataagccaatccaaac 12223833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 4004925 - 4004800
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||||||| |||||||| |||| |||||||| ||||| |||| || | ||| |||| |||||||||  ||||||||||||||    
T  4004925 ataagttctcactaacgaaaattgtagcttcataagttgtattttcataaactactttaaaaagcttatgaatagtacataaaagattatttatttgcat 4004826  T
Q  337 aagtttaaaaataagtcaatccaaac 362  Q
    ||||| ||||||||| ||||| ||||    
T  4004825 aagttcaaaaataaggcaatctaaac 4004800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 4027031 - 4026930
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||| |  ||||||||||||||||  |||||||||||| |||||||| |||| | |||  |||||||||||||  ||||||||||||||    
T  4027031 ataagttctcactaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttat-gataatacataaaagcttatttatttgcat 4026933  T
Q  337 aag 339  Q
    |||    
T  4026932 aag 4026930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 11777090 - 11776988
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||| |  || |||||||||||||  ||| |||||||| |||| |||||||| | ||||||||||||||||||  |||||||| |||||    
T  11777090 ataagttctcactaacaaaaagtgtatcttcataagctgtgttttcataaactaacttaacaagcttataaataatacataaaagcttatttatatgcat 11776991  T
Q  337 aag 339  Q
    |||    
T  11776990 aag 11776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 29774851 - 29774747
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    |||||||| |||||||   ||||||||||| ||||||||||||| |  || |||||| ||||||| |||||||||||||||    
T  29774851 ataagttctcactaacgaaaattgtattttcataagccgttttttcataaactaccttaacaaactaatgaataatgcataaaagtttatttatttgcat 29774752  T
Q  337 aagtt 341  Q
    |||||    
T  29774751 aagtt 29774747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 21788544 - 21788461
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||| | ||| ||||||| ||||||  |||||||||||||||||    
T  21788544 aattttatcttcataagttgttttttcataaactatcttaacaagcttatgaataataaataaaagcttatttatttgcataag 21788461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 25836692 - 25836794
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||   ||||||| |||||||||   ||||||||||| |||||||| |||| | ||| ||||||||||||||   |||||||||||||    
T  25836692 ataagttctcactaacgataattgtgtcttcataagccgttttttcataaactaccttgacaagcttatgaataatacataaaagcatatttatttgcat 25836791  T
Q  337 aag 339  Q
    |||    
T  25836792 aag 25836794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 341
Target Start/End: Original strand, 33321298 - 33321396
Alignment:
Q  243 tctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||| |  ||||||||||||||||  |||||||||||| |||||||| |||| | ||| ||||| ||||||||  ||||||||||||| |||||    
T  33321298 tctcactaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataagacataaaagcttatttatttgcacaagtt 33321396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 43787802 - 43787884
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||||| |||||||||||||  |||||| |||||   ||| |||||||||||||| |||||||||||| ||||    
T  43787802 aattgtatcttcataagttgttttttcataagctacctaaacaagtttatgaataatacataaaagtttatttatttgtataa 43787884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 12238485 - 12238589
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    |||||||| |||||||   ||||||||||| ||||||||||||| | |||||||||||||| ||   ||||||||||||||||| |  |||||||| |||    
T  12238485 aattgtatgttcataa---gttttttcataaactaccttaacaagcttataaataatacattaatgcttatttatttgcataagctctaaaataagccaa 12238581  T
Q  356 tccaaacg 363  Q
    ||| ||||    
T  12238582 tcccaacg 12238589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 32366232 - 32366152
Alignment:
Q  260 gtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||| |||||||| |||||||||||| |||||||| | || | ||||||||||||||||||  |||||||||||||||||||    
T  32366232 gtatattcataaactgttttttcataaactacctttaaaa-cttataaataatacataaaaacttatttatttgcataagtt 32366152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 15155919 - 15155815
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||| |||  | ||||||| |||| ||||||||||||||||| ||| | |||||||   ||||||||||||||||||   ||||||||| |||    
T  15155919 ataagttctcattaacggaaattgtaccttcttaaattgttttttcataaacttcattaacaagattataaataatacataaaagcatatttattttcat 15155820  T
Q  337 aagtt 341  Q
    |||||    
T  15155819 aagtt 15155815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 32522045 - 32522127
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||| || |||||||||||| |||||||||| ||   ||||||||||||||||||  |||||||||| ||||||    
T  32522045 aattgtatcttcatgaactgttttttcataaactaccttaa-aaaattataaataatacataaaaacttatttatttacataag 32522127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 339
Target Start/End: Original strand, 34913401 - 34913472
Alignment:
Q  268 ataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||| ||||||||||||| |||| |||||||| | ||| ||||||||||||||  |||||||||||||||||    
T  34913401 ataagttgttttttcataaactatcttaacaaacttatgaataatacataaaagcttatttatttgcataag 34913472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 27881005 - 27881079
Alignment:
Q  265 ttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||||||||  ||||||||| || | |||||||||||||||| |   ||||||||||||||||    
T  27881005 ttcataaattgttttttcataagctaccttaataaacttataaataatacataataacatatttatttgcataag 27881079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 43797003 - 43796909
Alignment:
Q  270 aaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaacga 364  Q
    ||||||| | |||||| ||||||||||||| | |||||||||||||| ||   |||||||||| |||||| |  |||||||| ||||||||||||    
T  43797003 aaattgtatattcataaactaccttaacaaacttataaataatacattaatacttatttatttacataagctctaaaataagccaatccaaacga 43796909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 16108121 - 16108178
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataata 313  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  16108121 aattgtatattcataagttgttttttcataaactaccttaacaaacttataaataata 16108178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 22898376 - 22898440
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||| |||||||||| |||  |||||||||||||||||| | ||||||||||||||||||    
T  22898376 ttttttcataaactaccttaaaaatt-tataaataatacataaaaatgtatttatttgcataagtt 22898440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 332
Target Start/End: Complemental strand, 24007880 - 24007804
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    ||||||||  |||||| ||||||||||| | ||||||||||||| | |  ||||||||||||||| |||||||||||    
T  24007880 aattgtattctcataagttgttttttcacaaactaccttaacaaactttcaaataatacataaaaatttatttattt 24007804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 736070 - 735991
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat 316  Q
    ||||||||||| ||| |  |||| |||||||||||| | |||||||||| || |||||||||| | ||||||||||||||    
T  736070 ataagttctcaataacaaaaattatatcttcataaactattttttcataaaccaccttaacaagcttataaataatacat 735991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 4090576 - 4090493
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||| |||  |||||||||||  |||||||| ||||   ||| |||||||||| ||| ||||||||||||||||||    
T  4090576 aattgtatcttcgtaagctgttttttcattgactaccttgacaagattatgaataatacatcaaagtttatttatttgcataag 4090493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 755724 - 755826
Alignment:
Q  240 agttctcactaatagtaattgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||| |  ||||||||||||||||  |||||||| |||| |||||| |||||| | | | ||||||||||||||  ||| |||||||| |||    
T  755724 agttctcactaacaaaaattgtatcttcataagctgtttttttcataaactaccgtaacaagcttctgaataatacataaaagcttaattatttgcgtaa 755823  T
Q  339 gtt 341  Q
    |||    
T  755824 gtt 755826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 887499 - 887393
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||   | |||| |||| |||||||| |||| | ||| ||||||||| ||||  ||||||||||||||||| | | ||||||  |||    
T  887499 aattgtatcttcataagcaggttttacataaactaccttgacaagcttatgaataatacaaaaaagcttatttatttgcataagctcagaaataatccaa 887400  T
Q  356 tccaaac 362  Q
    |||||||    
T  887399 tccaaac 887393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 2401602 - 2401703
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||| ||||| |  |||||||| |||||||    |||||||||| |||||||||| || | |||||| ||||||||||| | |||||||||||||    
T  2401602 ataagttctgactaacaaaaattgtattttcataacccattttttcataaactaccttaaaaa-cttataaacaatacataaaaatatatttatttgcat 2401700  T
Q  337 aag 339  Q
    |||    
T  2401701 aag 2401703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 9140703 - 9140653
Alignment:
Q  313 acataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    |||||||| ||||||||| |||||||| | |||||||||||||||||||||    
T  9140703 acataaaagtttatttatatgcataagctcaaaaataagtcaatccaaacg 9140653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 10574162 - 10574243
Alignment:
Q  258 ttgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||| ||||||| |||| |||||||||| || | ||||||||||| ||||||  |||| ||||||||||||    
T  10574162 ttgtatcttcataaatggtttttttcataaactaccttaaaaa-cttataaataatagataaaaacttatgtatttgcataag 10574243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 38471771 - 38471873
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||||||| ||||||||| |||||||||||| ||||| | || || | |||| |||| ||||||||   |||||||||||||    
T  38471771 ataagttctcactaacgaaaattgtaccttcataaactgttttttcataaactacatcaagaagcttatacataacacataaaagcatatttatttgcat 38471870  T
Q  337 aag 339  Q
    |||    
T  38471871 aag 38471873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 22422149 - 22422249
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||| ||||||||| |  ||| | ||||| | ||| |||||||||||| |||||||||| || | ||||||||||| ||||||  ||||||||||||||    
T  22422149 ataagctctcactaacaaaaatcgcatcttgaaaaactgttttttcataaactaccttaaaaa-cttataaataatatataaaaacttatttatttgcat 22422247  T
Q  337 aa 338  Q
    ||    
T  22422248 aa 22422249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 337
Target Start/End: Complemental strand, 24439106 - 24439025
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    |||||||| || |||| ||||||||||||| |||||| ||||||   |||||||||||||| ||  ||||| ||||||||||    
T  24439106 aattgtatgtttataagttgttttttcataaactaccgtaacaagattataaataatacattaatgtttatatatttgcata 24439025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 2790069 - 2790153
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa-ttttatttatttgcataag 339  Q
    ||||||||||||||||  ||||| |||||| | |||||| |||| | ||| |||||| |||||||  ||||||||||||||||||    
T  2790069 aattgtatcttcataagctgtttattcataaaataccttgacaagcttatcaataatgcataaaagctttatttatttgcataag 2790153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 285
Target Start/End: Complemental strand, 13098080 - 13097976
Alignment:
Q  186 tgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag-----ttctcactaatagtaattgtatcttcataaattgttttt 280  Q
    |||||||||||| || ||||  | ||||| || ||||| |||||||||||||||||     |||||||||| | ||||| | ||||||||| ||||||||    
T  13098080 tgtttggattgaattgtttttgagcttatgaataatagcttatgcaaataaataagcttttttctcactaacaataattttctcttcataagttgttttt 13097981  T
Q  281 tcata 285  Q
    |||||    
T  13097980 tcata 13097976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 17797386 - 17797330
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    |||||||||||||||||||  | |||||  |||| ||||||||||||||||||||||    
T  17797386 gtttggattgatttattttttaacttatgcaaaacagtttatgcaaataaataagtt 17797330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 36501514 - 36501578
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa 320  Q
    |||| |||||||||||  |||||||||||| |||||||| |||| | ||| ||||||||||||||    
T  36501514 aattttatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacataaaa 36501578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 7480879 - 7480986
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcct----ataaataatacataaaattttatttattt 332  Q
    ||||||||| ||||||   |||||||||||| ||| ||||||||| ||| |||||||| |||| | |    || ||||||| ||||||| ||||||||||    
T  7480879 ataagttctgactaatgaaaattgtatcttcctaagttgtttttt-ataaactaccttcacaaacttatgaatgaataatatataaaatattatttattt 7480977  T
Q  333 gcataagtt 341  Q
    |||||||||    
T  7480978 gcataagtt 7480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 8342999 - 8343105
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||||| ||||| |||| | ||| || |||| | ||| ||||||||||||||   ||| |||||||||||  | |||| ||||||||    
T  8342999 aattgtatcttcataaattatttttgcataaaatacattgacaagcttat-aataatacataaaaaaatatgtatttgcataaactcaaaagtaagtcaa 8343097  T
Q  356 tccaaacg 363  Q
    || |||||    
T  8343098 tcaaaacg 8343105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 8441536 - 8441477
Alignment:
Q  280 ttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||| ||||| ||||||| | ||||||||||||||||||   ||||||||||||||||    
T  8441536 ttcataaactacattaacaaacttataaataatacataaaaacatatttatttgcataag 8441477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 17546456 - 17546393
Alignment:
Q  278 ttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||| || |||||||| |||| |||||||||||||||||||| |||||| | ||| |||||||    
T  17546456 ttttcgtaaactaccttgacaagcctataaataatacataaaaatttattcaattgtataagtt 17546393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 341
Target Start/End: Original strand, 33321420 - 33321487
Alignment:
Q  274 tgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||| |||||||| |||| | ||| | ||||||||||||  ||| |||||||||||||||    
T  33321420 tgttttttcataaactaccttgacaagcttatgagtaatacataaaaacttaattatttgcataagtt 33321487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 37419950 - 37419899
Alignment:
Q  310 aatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaa 361  Q
    |||||||||||  ||||||||||||||||| | |||| ||||||||||||||    
T  37419950 aatacataaaagcttatttatttgcataagctcaaaattaagtcaatccaaa 37419899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 40301414 - 40301356
Alignment:
Q  280 ttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||| |||||||||| || | ||||||||||||||||||  |||||||||||||||||    
T  40301414 ttcataaactaccttaaaaa-cttataaataatacataaaaacttatttatttgcataag 40301356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 41554602 - 41554669
Alignment:
Q  279 tttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaa 346  Q
    ||||||| ||||| |||||||   ||| |||||||||||||| |||||||||||| ||||||| ||||    
T  41554602 tttcataaactactttaacaaatttatgaataatacataaaagtttatttatttgtataagttcaaaa 41554669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 8832633 - 8832579
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    ||||||||||| |||||||  | ||||| |||||||| |||||||||||||||||    
T  8832633 gtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataag 8832579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 2757088 - 2757151
Alignment:
Q  274 tgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||| ||||| |||| || | ||||||||||||||||||  |||||||||||||||||    
T  2757088 tgttttttcataaactactttaaaaa-cttataaataatacataaaa-cttatttatttgcataag 2757151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 7480832 - 7480865
Alignment:
Q  210 cttataaaaaatagtttatgcaaataaataagtt 243  Q
    |||||||||||||| |||||||||||||||||||    
T  7480832 cttataaaaaatagattatgcaaataaataagtt 7480865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 17532013 - 17531953
Alignment:
Q  278 ttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||| |||||||||| || | |||| |||||||||||||  |||||||||||||||||    
T  17532013 ttttcataaactaccttaaaaa-cttatagataatacataaaaacttatttatttgcataag 17531953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 26440058 - 26440114
Alignment:
Q  186 tgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    |||||||||| | ||||||| || |||||| |||| ||||||||||||||||||||||    
T  26440058 tgtttggattaacttattttaaagcttatataaaa-agtttatgcaaataaataagtt 26440114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 38216125 - 38216027
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    |||||||||||||||   | ||||||| || |||||||| |||| | ||| ||||||||||||    ||||||||||||||    
T  38216125 ataagttctcactaacgaaaattgtatcttcatatgctattttttcctaaactaccttgacaagcttatgaataatacataa----ttatttatttgcat 38216030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 2757188 - 2757132
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataagtt 243  Q
    ||||||||||| |||||||  | |||||| |||| || |||||||||||||||||||    
T  2757188 gtttggattgacttattttagagcttatataaaacagcttatgcaaataaataagtt 2757132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 17317199 - 17317159
Alignment:
Q  323 ttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    |||||||||| |||||| | |||||||||||||||||||||    
T  17317199 ttatttatttacataagctcaaaaataagtcaatccaaacg 17317159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 6337736 - 6337856
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||| |||| |  ||||||||||||||||  |||||||||||| |||||||| |||| | ||| ||||||||||||||  |||||||||| |||    
T  6337736 ataagttctcgctaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttacat 6337835  T
Q  337 aagtttaaaaataagtcaatc 357  Q
    ||| |  ||||||||||||||    
T  6337836 aagctctaaaataagtcaatc 6337856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 361
Target Start/End: Complemental strand, 48819405 - 48819281
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||| |  || |||||||||||||  |||||||||||| |||||||| |||| | ||| |||||||||| |||  | ||||||||||||    
T  48819405 ataagttctcactaacaaaaaatgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacattaaagctcatttatttgcat 48819306  T
Q  337 aagtttaaaaataagtcaatccaaa 361  Q
    ||| | ||||||||| |||||||||    
T  48819305 aagctcaaaaataagccaatccaaa 48819281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 363
Target Start/End: Complemental strand, 1005446 - 1005320
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||  |  |||||||||||||||| | ||||||||||  |||||||  |||| | ||| |||||||| |||||  ||||||||||||||    
T  1005446 ataagttctcactatcaaaaattgtatcttcataagtagttttttcattaactacctagacaagcttatgaataatacgtaaaagcttatttatttgcat 1005347  T
Q  337 aagtttaaaaataagtcaatccaaacg 363  Q
    ||| ||||||||||| |||| ||||||    
T  1005346 aagcttaaaaataagccaattcaaacg 1005320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 13412433 - 13412536
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||| ||||||||| |  | |||||||||||| ||| ||||||||||| |||||||||| || | |||||||||||||||||| ||||| |||||||||    
T  13412433 ataagctctcactaacaaaatttgtatcttcatgaatggttttttcataaactaccttaaaaa-cttataaataatacataaaaatttatgtatttgcat 13412531  T
Q  337 aagtt 341  Q
    |||||    
T  13412532 aagtt 13412536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 3116061 - 3116143
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||||| ||||||||||| |||||||||| || | |||||| || |||||||| ||||||||||||||||||    
T  3116061 aattgtatcttcataaatggttttttcataaactaccttaa-aaacttataaacaaaacataaaaatttatttatttgcataag 3116143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 32497271 - 32497353
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||| ||||||| |||||||||||| |||||||||| || | ||||||||||||||||||  |||||||||||||||||    
T  32497271 aattgtatcctcataaactgttttttcataaactaccttaa-aaacttataaataatacataaaaacttatttatttgcataag 32497353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 45267553 - 45267446
Alignment:
Q  256 aattgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtca 354  Q
    ||||||||||||||||  |||||||| |||| |||||||| |||| |  |||||||||||  ||||  ||||||||||||||||| | ||||||||||||    
T  45267553 aattgtatcttcataagctgtttttttcataaactaccttgacaagctaataaataatactaaaaagcttatttatttgcataagctcaaaaataagtca 45267454  T
Q  355 atccaaac 362  Q
    ||||||||    
T  45267453 atccaaac 45267446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 335
Target Start/End: Complemental strand, 4068221 - 4068123
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgca 335  Q
    |||||||||||||||    ||| |||||||||||| ||||||||||||| |||||||| |||| | ||| ||||||||||||||  |||||||||||||    
T  4068221 ataagttctcactaacgaaaatagtatcttcataagttgttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgca 4068123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 237 - 362
Target Start/End: Original strand, 16888946 - 16889070
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||| |||||||||||   ||||||||||||||||  |||||||||||| |||||||| |||| | ||| ||||||||||||||  ||||||||||||      
T  16888946 ataaattctcactaatgaaaattgtatcttcataagctgttttttcataaactacctt-acaagcttatgaataatacataaaagcttatttatttgcgc 16889044  T
Q  337 aagtttaaaaataagtcaatccaaac 362  Q
    ||| | || |||||| ||||||||||    
T  16889045 aagctaaacaataagccaatccaaac 16889070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 31378750 - 31378851
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||| |||||   |||||||||| |||||||| |||| | | | ||||||| ||||||  ||||||||||||||||| |||||||||||||||    
T  31378750 aattgtatctttataaacgtttttttcataaactaccttgacaagcttgttaataatatataaaagcttatttatttgcataagcttaaaaataagtcaa 31378849  T
Q  356 tc 357  Q
    ||    
T  31378850 tc 31378851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 332
Target Start/End: Complemental strand, 19220260 - 19220185
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    ||||| |||||||||||| ||||||||||| |||||||||| || ||||||||||||||||||||  ||||||||||    
T  19220260 aattgcatcttcataaatagttttttcataaactaccttaa-aaacctataaataatacataaaaacttatttattt 19220185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 339
Target Start/End: Complemental strand, 28690105 - 28690006
Alignment:
Q  242 ttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa--ttttatttatttgcataag 339  Q
    ||||||||||||  ||||||||||||||||  ||||| |||||| |||||||| |||| | ||| ||||||||||||||  || ||||||||||||||||    
T  28690105 ttctcactaataaaaattgtatcttcataagctgtttgttcataaactaccttgacaaacttatgaataatacataaaaccttatatttatttgcataag 28690006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 5243403 - 5243485
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||||| | |||||||||| |||||||||| || | ||||||||||||| ||||  |||||||||||||||||    
T  5243403 aattgtatcttcataaactattttttcataaactaccttaa-aaacttataaataatacacaaaaacttatttatttgcataag 5243485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 320
Target Start/End: Original strand, 9572764 - 9572847
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa 320  Q
    ||||||||||||||| |  || | ||||||||||||||||||||||||| ||||||||||||| | ||| ||||||| ||||||    
T  9572764 ataagttctcactaacaaaaactttatcttcataaattgttttttcataaactaccttaacaaacttatgaataataaataaaa 9572847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 352
Target Start/End: Original strand, 15515327 - 15515442
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    ||||||||||||||||  | |||||||||| |||||||| |||| | ||| ||||||||||||||  ||||||||| ||||    
T  15515327 ataagttctcactaacgaaaattgtatcttcataagctcttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttattagcat 15515426  T
Q  337 aagtttaaaaataagt 352  Q
    ||  | ||||||||||    
T  15515427 aaactcaaaaataagt 15515442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 17628424 - 17628506
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||||||  ||||||||||| |||||||||| || | ||||||||||||||||||  ||||||||||| |||||    
T  17628424 aattgtatcttcataaacggttttttcataaactaccttaa-aaacttataaataatacataaaaacttatttatttgtataag 17628506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 37329411 - 37329518
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaa 355  Q
    ||||||||||||||||  |||||||||||| |||||||| ||||   ||| ||||||||||||||  | ||||||||||||||  | ||||||||| | |    
T  37329411 aattgtatcttcataagctgttttttcataaactaccttgacaagtttatgaataatacataaaagctcatttatttgcataatctcaaaaataagccta 37329510  T
Q  356 tccaaacg 363  Q
    ||||||||    
T  37329511 tccaaacg 37329518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 51162356 - 51162273
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||| | | |||||||||||| ||   |||||||||||||||||    
T  51162356 aattgtatattcataagttgttttttcataaactaccttaacaaacttgtaaataatacattaatgcttatttatttgcataag 51162273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 22593387 - 22593489
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||| |  ||||||||||| ||||| || |||||| || ||| | || |||| | ||| |||||||||||||| |||||||||||||||    
T  22593387 ataagttctcactaacaaaaattgtatctttataaagtgatttttcgtaaactgcatttacaagcttatgaataatacataaaaatttatttatttgcat 22593486  T
Q  337 aag 339  Q
    |||    
T  22593487 aag 22593489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 35282574 - 35282676
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||| ||||||||   |||| ||||||||||| ||||||||||||| ||||||||||||    ||||||||||| |||||   ||||||||||||||    
T  35282574 ataagttttcactaattaaaattttatcttcataagttgttttttcataaactaccttaacatgtttataaataataaataaacgcttatttatttgcat 35282673  T
Q  337 aag 339  Q
    |||    
T  35282674 aag 35282676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 36422985 - 36423063
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||| |||||| |||||| ||||||||||||| | ||| ||||||| ||||||  |||||||||||||||||    
T  36422985 tatcttcataagttgtttattcataaactaccttaacaaacttatgaataataaataaaagcttatttatttgcataag 36423063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 15631991 - 15631906
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||| ||||||||  ||||||||||| | ||| ||||||| | ||||||||||||||||||  ||||||||||| |||||||    
T  15631991 aattgtattttcataaacagttttttcataaaatacattaacaaacttataaataatacataaaaacttatttatttgtataagtt 15631906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 26946103 - 26946167
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa 320  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| | ||| ||||| ||||||||    
T  26946103 aattgtatcttcataagttgttttttcataaactaccttaacaagcttatgaataacacataaaa 26946167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 363
Target Start/End: Complemental strand, 26988235 - 26988123
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttattta-----tttgcataagtttaaaaataa 350  Q
    ||||||||||||||||  |||||||||||| |||||||| |||| | ||| ||||| ||||||||  |||||||     |||||||||| | ||||||||    
T  26988235 aattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataagacataaaagcttatttatttgttttgcataagctcaaaaataa 26988136  T
Q  351 gtcaatccaaacg 363  Q
     ||||||||||||    
T  26988135 ttcaatccaaacg 26988123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 13039029 - 13038954
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||| ||||||||||||| ||||||||||||| |  || ||||||| ||||||  ||||||||||||||    
T  13039029 tatcttcataagttgttttttcataaactaccttaacaagctcatgaataatatataaaagcttatttatttgcat 13038954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 25485835 - 25485752
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||    || ||||| | |||||| ||||||||||||||||||    
T  25485835 aattttatcttcataaattgttttttcataaactaccttaataaggtcatgaataacaaataaaaatttatttatttgcataag 25485752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 41003494 - 41003388
Alignment:
Q  236 aataagttctcactaatagtaattgtatcttcataaattgttttttcatacactacctta-acaatcctataaataatacataaaattttatttatttgc 334  Q
    ||||||||||||||||||  |||| ||||||  |||  ||||||| |||| ||||||||  |||| | ||||||||||||||||||  ||||||||||||    
T  41003494 aataagttctcactaataaaaattatatcttagtaagctgttttt-cataaactacctttgacaaacttataaataatacataaaaacttatttatttgc 41003396  T
Q  335 ataagttt 342  Q
    ||||||||    
T  41003395 ataagttt 41003388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 3069834 - 3069936
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||| |   ||||||||||||||||  |||||||||||| |||||||| |||| | ||| |||||||||| |||  ||| ||||||| ||    
T  3069834 ataagttctcactagtgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacattaaagcttacttatttgtat 3069933  T
Q  337 aag 339  Q
    |||    
T  3069934 aag 3069936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 5347221 - 5347157
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||| |||||||||| || | |||||||||||||||||| | ||||||||||||||||||    
T  5347221 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataagtt 5347157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 16225613 - 16225514
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||  | || ||||||||||||| |||||||||| || | ||||||||||| | ||||| ||||||||||||  |||||||||| |||    
T  16225613 ataagttctcactaac-gaaactgtatcttcataagttgttttttcctaaattaccttaacaa-cttataattaatacataaaaacttatttatttacat 16225516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 26543060 - 26542975
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||  ||| ||| ||||||||||||| ||||| ||||||| | |||| |||||||||||||   ||||||||||||||||||    
T  26543060 aattgtactttcttaagttgttttttcataaactacattaacaaacttatatataatacataaaagcatatttatttgcataagtt 26542975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 35590217 - 35590132
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||  |||||||||||| || ||||| |||| | ||| ||  ||||||||||  |||||||||||||||||||    
T  35590217 aattgtatcttcataagctgttttttcataaacaaccttgacaagcttatgaactatacataaaagcttatttatttgcataagtt 35590132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 49971338 - 49971253
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||| |||  |||||||||||| ||||| ||||||| | ||||||||||| |||||    ||||||||||||||||||    
T  49971338 aattgtatcttcgtaagctgttttttcataaactacattaacaagcttataaataataaataaaggaatatttatttgcataagtt 49971253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 26435177 - 26435256
Alignment:
Q  259 tgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||||||  ||||||||||| ||||| || |||| | || |||||||||||||||  |||||||||||||||||    
T  26435177 tgtatcttcataaacagttttttcataaactactttgacaaacttaaaaataatacataaaa-cttatttatttgcataag 26435256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 37712152 - 37712073
Alignment:
Q  258 ttgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    |||||||||||||| ||||||||||||| |||||||| |||| | ||| ||| ||||||||||  ||||| ||||||||||    
T  37712152 ttgtatcttcataagttgttttttcataaactaccttgacaagcttatgaat-atacataaaagcttattcatttgcataa 37712073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 341
Target Start/End: Complemental strand, 10082335 - 10082252
Alignment:
Q  259 tgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||| ||||||| ||||||||| |||| |||||||| |||| | ||| ||||| ||||||||  |||||||||||||||||||    
T  10082335 tgtattttcataagttgtttttttcataaactaccttgacaaacttatcaataacacataaaaacttatttatttgcataagtt 10082252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 15791470 - 15791388
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||| ||   |||||||||| |||||||||| || | ||||||||||||||||||  |||||||||| ||||||    
T  15791470 aattgtatcttcattaacgattttttcataaactaccttaaaaa-cttataaataatacataaaaacttatttatttacataag 15791388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 16708886 - 16708803
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||| ||||||||||||||||||||| || |||||||||    |||||||| ||||| ||  ||| ||||||||||||||    
T  16708886 aattgtatattcataaattgttttttcataaacaaccttaacagatttataaatagtacattaatatttctttatttgcataag 16708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 17814257 - 17814195
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||| |||||||||| || | |||||||||||||||||| | ||||||||||||||||    
T  17814257 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataag 17814195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 20169351 - 20169268
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||| || ||||| |||||||||||| ||||  || | || | ||||||||||||||||||  |||||||||||||||||    
T  20169351 aattgtatatttataaactgttttttcataaactatatttaaaaacttataaataatacataaaagcttatttatttgcataag 20169268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 26435086 - 26435137
Alignment:
Q  188 tttggattgatttattttcaatcttataaaaaatagtttatgcaaataaata 239  Q
    |||||||||| ||||||| || ||||| ||||||||||||||||||||||||    
T  26435086 tttggattgacttatttttaagcttatgaaaaatagtttatgcaaataaata 26435137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 34265647 - 34265580
Alignment:
Q  265 ttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    ||||||| ||||||||||||| |||||||||||||   |||||||||||||| ||  |||||||||||    
T  34265647 ttcataagttgttttttcataaactaccttaacaaatttataaataatacattaatatttatttattt 34265580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 46500910 - 46500964
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataag 241  Q
    ||||||||||| |||||||  |||||||||||||||  |||||||||||||||||    
T  46500910 gtttggattgacttattttttatcttataaaaaataacttatgcaaataaataag 46500964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 12256693 - 12256609
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||| ||||||||||||||||| |||| ||||| | ||||||| ||||||||||| ||||||   || |||||| ||||||||    
T  12256693 aattgtaccttcataaattgttttt-cataaactacatcaacaatcttataaataatatataaaagcataattatttacataagtt 12256609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 28870261 - 28870204
Alignment:
Q  306 aaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    ||||||||||||||  |||||||||||||||||| | ||||||||| ||||| |||||    
T  28870261 aaataatacataaatgtttatttatttgcataagctcaaaaataagccaatctaaacg 28870204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 29333504 - 29333427
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttg 333  Q
    |||||||| ||||||| |||||||||||||  ||| |||||||| | |||||||||||||| ||   |||||||||||    
T  29333504 aattgtatattcataagttgttttttcataagctatcttaacaaacttataaataatacattaatacttatttatttg 29333427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 31345957 - 31345872
Alignment:
Q  277 tttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtcaatccaaac 362  Q
    |||||||||  |||||||||| | || || |||||||||||||| || ||| ||||| ||||| |||||||||||  |||||||||    
T  31345957 tttttcataatctaccttaacgaaccaatgaataatacataaaagttgattcatttgtataagcttaaaaataagcaaatccaaac 31345872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 41196696 - 41196773
Alignment:
Q  243 tctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaa 320  Q
    ||||||||| |  ||||||||||||||||  |||||||||||| ||||| || |||| | ||| ||||||||||||||    
T  41196696 tctcactaacaaaaattgtatcttcataagctgttttttcataaactacattgacaagcttatgaataatacataaaa 41196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 26988325 - 26988273
Alignment:
Q  186 tgtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaat 238  Q
    |||||||||||| |||||||  | ||||| |||||||||||||||||||||||    
T  26988325 tgtttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaat 26988273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 18327611 - 18327528
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||| | |||||||  |||||||||||| |||| ||| |||| | ||| | ||||||||||||  |||||||||||||||||    
T  18327611 aattgtgtgttcataagctgttttttcataaactatcttgacaagcttatgagtaatacataaaagcttatttatttgcataag 18327528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 37148112 - 37148175
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||| ||||||||||||  | |||||||||||||| ||   |||||||||||||||||    
T  37148112 ttttttcataaactaccttaacatacttataaataatacattaatgcttatttatttgcataag 37148175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 37156937 - 37157000
Alignment:
Q  276 ttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||| ||||||||||||  | |||||||||||||| ||   |||||||||||||||||    
T  37156937 ttttttcataaactaccttaacatacttataaataatacattaatgcttatttatttgcataag 37157000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 39941587 - 39941516
Alignment:
Q  266 tcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcata 337  Q
    |||||| ||||||||||||  ||||| || |||| | ||| |||||||||||||| || |||||||||||||    
T  39941587 tcataagttgttttttcattaactactttgacaagcttatgaataatacataaaaattcatttatttgcata 39941516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 46473176 - 46473105
Alignment:
Q  261 tatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    ||||||||||| ||||||||||||| |||||||||| || |  || ||||||| ||||||  ||||||||||    
T  46473176 tatcttcataagttgttttttcatatactaccttaaaaacctcatgaataataaataaaagcttatttattt 46473105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 14461021 - 14461075
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactac 291  Q
    ||||||||||||||||   ||||||||||| ||||| |||||||||||| |||||    
T  14461021 ataagttctcactaatgaaaattgtatctttataaactgttttttcataaactac 14461075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 22103176 - 22103115
Alignment:
Q  277 tttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||| |||||||||| || | |||||||||||||||||| | ||||||||| ||||||    
T  22103176 tttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttacataag 22103115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 35275897 - 35275981
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacat--aaaattttatttatttgcataag 339  Q
    |||||||| ||| ||||  | ||||||||| |||||||||| |||| ||||||||||||||  |||| |||||||||||| |||||    
T  35275897 aattgtatattcctaaacaggtttttcataaactaccttaa-aatcttataaataatacataaaaaaatttatttatttgtataag 35275981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 42367114 - 42367068
Alignment:
Q  199 ttattttcaatcttataaaaaatagtttatgcaaataaataagttct 245  Q
    ||||||| || ||||| |||||||| |||||||||||||||||||||    
T  42367114 ttatttttaagcttatgaaaaatagcttatgcaaataaataagttct 42367068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 42591466 - 42591412
Alignment:
Q  259 tgtatcttcataaattgttttttcatacactaccttaacaatcctataaataata 313  Q
    |||||||||||||| | |||||||||| | ||||||||||| | |||||||||||    
T  42591466 tgtatcttcataaactattttttcataaaataccttaacaaacttataaataata 42591412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 46263485 - 46263399
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataataca-taaaattttatttatttgcataagtt 341  Q
    |||||||| ||||||| ||||||||||||| | || | ||||||   ||||||||||||| ||| ||||| ||||||| ||||||||    
T  46263485 aattgtatattcataagttgttttttcataaattaacctaacaaatttataaataatacattaatattttttttatttacataagtt 46263399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 9575504 - 9575451
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaataa 240  Q
    ||||| |||| |||||||| || ||||| ||||||||||||| |||||||||||    
T  9575504 gtttgaattgttttatttttaaacttatgaaaaatagtttatacaaataaataa 9575451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 10365237 - 10365176
Alignment:
Q  277 tttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataa 338  Q
    ||||||||| ||||| || |||| | ||| |||||||||||||| |||||| ||||||||||    
T  10365237 tttttcataaactactttgacaagcttattaataatacataaaagtttattcatttgcataa 10365176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 1321716 - 1321660
Alignment:
Q  186 tgtttggattgatttattttcaatcttat-aaaaaatagtttatgcaaataaataag 241  Q
    |||||||||||  ||||||| || ||||| ||||||||||| |||||||||||||||    
T  1321716 tgtttggattggcttattttgaagcttatgaaaaaatagttcatgcaaataaataag 1321660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 15235167 - 15235242
Alignment:
Q  263 tcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    ||||||||||  ||||||||||| |||  ||||| || | ||||||||||||||||||  |||||||||| ||||||    
T  15235167 tcttcataaaccgttttttcataaactgtcttaaaaa-cttataaataatacataaaaacttatttatttacataag 15235242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 36178556 - 36178516
Alignment:
Q  323 ttatttatttgcataagtttaaaaataagtcaatccaaacg 363  Q
    ||||||||||||||||| | |||| ||||||||||||||||    
T  36178556 ttatttatttgcataagctcaaaagtaagtcaatccaaacg 36178516  T

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Target: scaffold0006 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 278972 - 279075
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||| ||||||||| |  | ||||||||| |||||| ||||||||||| |||||||||| || | |||||||||||||||||| ||||| |||||||||    
T  278972 ataagctctcactaacaaaatttgtatctttataaatggttttttcataaactaccttaaaaa-cttataaataatacataaaaatttatgtatttgcat 279070  T
Q  337 aagtt 341  Q
    |||||    
T  279071 aagtt 279075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 40723 - 40760
Alignment:
Q  303 tataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  40723 tataaataatacataaaa-tttatttatttgcataagtt 40760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 1164 - 1060
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    ||||||||||||||||   | |||||||||||||| || ||||| |||| | ||||||||||||| |||  |||||| ||||||  ||||||||||||||    
T  1164 ataagttctcactaatgaaatttgtatcttcataagttatttttccataaattaccttaacaatcttatggataataaataaaagcttatttatttgcat 1065  T
Q  337 aagtt 341  Q
    |||||    
T  1064 aagtt 1060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 178588 - 178502
Alignment:
Q  256 aattgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    ||||||||||||||||| | |||||| |||| | |||||||| || | ||||||||||||||||||  |||||||||||||||||||    
T  178588 aattgtatcttcataaactatttttttcataaaataccttaagaaacttataaataatacataaaagcttatttatttgcataagtt 178502  T

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Target: scaffold1088 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 1381 - 1296
Alignment:
Q  256 aattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtt 341  Q
    |||||||| || |||| ||||||||||||| ||||||||||||| | ||||||||||| || ||   ||||| |||||||||||||    
T  1381 aattgtatatttataacttgttttttcataaactaccttaacaaacttataaataatatattaatccttattcatttgcataagtt 1296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 14726 - 14840
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcat 336  Q
    |||||||||||||||    |||||||| || ||||| || ||||||||| ||||| || | || | ||| ||||||||||||||  ||||||||||| ||    
T  14726 ataagttctcactaacgaaaattgtatatttataaactgatttttcataaactacatttaaaaacttatgaataatacataaaagcttatttatttgtat 14825  T
Q  337 aagtttaaaaataag 351  Q
    ||| | |||||||||    
T  14826 aagctcaaaaataag 14840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 227794 - 227688
Alignment:
Q  256 aattgtatcttcataaattgtttttt-catacactaccttaacaatcctataaataatacataaaattttatttatttgcataagtttaaaaataagtca 354  Q
    |||||||| |||||||  |||||||| |||| ||||||||||||| | |||||||| ||||| ||   ||||||||| ||||||| |  |||||||| ||    
T  227794 aattgtatattcataagctgtttttttcataaactaccttaacaaacttataaatactacattaatgcttatttattcgcataagctctaaaataagcca 227695  T
Q  355 atccaaa 361  Q
    |||||||    
T  227694 atccaaa 227688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 242735 - 242702
Alignment:
Q  210 cttataaaaaatagtttatgcaaataaataagtt 243  Q
    |||||| |||||||||||||||||||||||||||    
T  242735 cttatataaaatagtttatgcaaataaataagtt 242702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 11280 - 11384
Alignment:
Q  237 ataagttctcactaatagtaat-tgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgca 335  Q
    |||||||||||||||| | ||| ||||||||||||| || ||||| |||| | ||||||||||| |  ||  |||||| ||||||  |||||||||||||    
T  11280 ataagttctcactaat-gaaatatgtatcttcataagttatttttccataaattaccttaacaagctaatggataataaataaaagcttatttatttgca 11378  T
Q  336 taagtt 341  Q
    ||||||    
T  11379 taagtt 11384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 24853 - 24749
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactacctta--acaatcctataaataatacataaaattttatttatttgc 334  Q
    ||||||||||||||||    |||||||||| || |  |||||||||||| ||||||||   |||| | ||| ||||||||||||||  ||||||||||||    
T  24853 ataagttctcactaatgaatattgtatcttgattagctgttttttcataaactaccttttgacaagcttatgaataatacataaaagcttatttatttgc 24754  T
Q  335 ataag 339  Q
    |||||    
T  24753 ataag 24749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 58778 - 58830
Alignment:
Q  187 gtttggattgatttattttcaatcttataaaaaatagtttatgcaaataaata 239  Q
    ||||||||||  ||||||| || |||||||||||||| |||||||||||||||    
T  58778 gtttggattggcttatttttaaacttataaaaaatagcttatgcaaataaata 58830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 332
Target Start/End: Original strand, 58848 - 58943
Alignment:
Q  237 ataagttctcactaatagtaattgtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttattt 332  Q
    ||||||| |||||||  | ||||||||||||||||| |  ||||||||| ||||| || |||| | ||  |||||||||||||  |||||||||||    
T  58848 ataagttttcactaacggaaattgtatcttcataaaatactttttcataaactacattgacaaacttaagaataatacataaacgtttatttattt 58943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 59350 - 59272
Alignment:
Q  260 gtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||||  ||||||||| | || ||||||| || | |||||||||||| |||||  |||||||||||||||||    
T  59350 gtatcttcataaaccgttttttcaaatacaaccttaaaaa-cttataaataatacttaaaaacttatttatttgcataag 59272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 142422 - 142343
Alignment:
Q  260 gtatcttcataaattgttttttcatacactaccttaacaatcctataaataatacataaaattttatttatttgcataag 339  Q
    |||||||||||| ||||||||||||| | ||| |||| ||   ||| ||||||||||||||  | |||||||||||||||    
T  142422 gtatcttcataatttgttttttcataaattacattaataagtatatgaataatacataaaagctcatttatttgcataag 142343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 89322 - 89357
Alignment:
Q  326 tttatttgcataagtttaaaaataagtcaatccaaa 361  Q
    |||||||||||||| |||||||||||||||||||||    
T  89322 tttatttgcataagcttaaaaataagtcaatccaaa 89357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 38547 - 38515
Alignment:
Q  211 ttataaaaaatagtttatgcaaataaataagtt 243  Q
    ||||| |||||||||||||||||||||||||||    
T  38547 ttatataaaatagtttatgcaaataaataagtt 38515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 109113 - 109157
Alignment:
Q  307 aataatacataaaattttatttatttgcataagtttaaaaataag 351  Q
    ||||||||||| || |||||||||||||||||| | |||||||||    
T  109113 aataatacatagaagtttatttatttgcataagctaaaaaataag 109157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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