View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11452_low_10 (Length: 242)

Name: NF11452_low_10
Description: NF11452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11452_low_10
NF11452_low_10
[»] chr5 (40 HSPs)
chr5 (55-239)||(26319052-26319236)
chr5 (55-239)||(37094912-37095101)
chr5 (55-165)||(15799159-15799270)
chr5 (55-159)||(6156665-6156770)
chr5 (59-166)||(25746964-25747071)
chr5 (55-166)||(26190373-26190485)
chr5 (59-165)||(20891551-20891658)
chr5 (55-165)||(4064796-4064907)
chr5 (75-216)||(34440688-34440837)
chr5 (59-157)||(38871609-38871708)
chr5 (55-166)||(12465185-12465293)
chr5 (67-165)||(40620066-40620165)
chr5 (75-232)||(38640676-38640839)
chr5 (66-165)||(39524721-39524821)
chr5 (75-165)||(14111851-14111942)
chr5 (59-165)||(28083454-28083561)
chr5 (66-159)||(15957694-15957788)
chr5 (59-216)||(36359604-36359769)
chr5 (55-159)||(33487544-33487649)
chr5 (59-165)||(38372247-38372354)
chr5 (69-165)||(38692859-38692955)
chr5 (99-166)||(24203759-24203826)
chr5 (65-165)||(32842048-32842149)
chr5 (67-165)||(8032217-8032316)
chr5 (99-165)||(29862591-29862657)
chr5 (77-165)||(31221415-31221504)
chr5 (173-232)||(38640988-38641047)
chr5 (59-232)||(43388073-43388252)
chr5 (67-167)||(37183856-37183957)
chr5 (75-232)||(28445413-28445578)
chr5 (59-165)||(27212646-27212753)
chr5 (173-232)||(8739196-8739255)
chr5 (59-118)||(31929229-31929289)
chr5 (15-59)||(4064933-4064976)
chr5 (180-232)||(16429133-16429185)
chr5 (15-59)||(26318982-26319026)
chr5 (65-158)||(26095035-26095129)
chr5 (17-59)||(37095126-37095168)
chr5 (17-57)||(12464598-12464638)
chr5 (204-232)||(16429367-16429395)
[»] chr1 (45 HSPs)
chr1 (75-239)||(24471316-24471481)
chr1 (75-239)||(30829468-30829632)
chr1 (59-232)||(43319199-43319379)
chr1 (55-166)||(33611485-33611597)
chr1 (55-166)||(18583619-18583731)
chr1 (59-165)||(32817687-32817794)
chr1 (64-165)||(42545948-42546050)
chr1 (69-165)||(34162797-34162894)
chr1 (55-166)||(23442710-23442822)
chr1 (55-165)||(17000351-17000461)
chr1 (59-165)||(40650751-40650858)
chr1 (55-166)||(49786241-49786352)
chr1 (66-165)||(28866707-28866806)
chr1 (59-165)||(15069917-15070025)
chr1 (55-157)||(41584754-41584857)
chr1 (67-165)||(44573172-44573271)
chr1 (78-159)||(49677478-49677560)
chr1 (59-159)||(45046933-45047033)
chr1 (59-166)||(40908009-40908117)
chr1 (69-165)||(7011195-7011293)
chr1 (59-165)||(45567952-45568059)
chr1 (75-159)||(32542388-32542473)
chr1 (70-165)||(34006246-34006342)
chr1 (75-232)||(800806-800969)
chr1 (59-174)||(38950255-38950361)
chr1 (173-232)||(43318988-43319047)
chr1 (65-166)||(26723564-26723660)
chr1 (17-59)||(33611623-33611665)
chr1 (59-157)||(6223821-6223921)
chr1 (180-232)||(9446103-9446155)
chr1 (15-59)||(24471517-24471561)
chr1 (59-131)||(27794831-27794903)
chr1 (59-121)||(52744937-52745000)
chr1 (17-59)||(18583757-18583799)
chr1 (17-59)||(30829668-30829710)
chr1 (17-59)||(32542310-32542352)
chr1 (15-57)||(32542839-32542881)
chr1 (15-57)||(49786907-49786949)
chr1 (17-58)||(23442642-23442683)
chr1 (181-229)||(9445897-9445945)
chr1 (99-165)||(38885245-38885310)
chr1 (180-229)||(800603-800652)
chr1 (15-59)||(17000282-17000325)
chr1 (15-59)||(34162935-34162978)
chr1 (17-57)||(44937783-44937823)
[»] chr2 (24 HSPs)
chr2 (75-239)||(33366920-33367085)
chr2 (55-163)||(36949018-36949127)
chr2 (59-165)||(17474870-17474977)
chr2 (59-159)||(41510505-41510606)
chr2 (64-165)||(15995184-15995287)
chr2 (59-165)||(39447138-39447245)
chr2 (59-165)||(32187940-32188047)
chr2 (59-165)||(33452514-33452621)
chr2 (59-165)||(45153862-45153969)
chr2 (59-159)||(25217868-25217968)
chr2 (59-165)||(44465798-44465906)
chr2 (75-165)||(36874977-36875068)
chr2 (69-165)||(4268309-4268406)
chr2 (59-231)||(9847424-9847603)
chr2 (75-165)||(41854970-41855061)
chr2 (75-165)||(42894369-42894460)
chr2 (69-226)||(25715351-25715510)
chr2 (65-165)||(41203258-41203358)
chr2 (173-232)||(9847215-9847274)
chr2 (59-165)||(34517077-34517183)
chr2 (59-159)||(5507392-5507495)
chr2 (77-155)||(38308875-38308954)
chr2 (17-59)||(25715267-25715309)
chr2 (178-232)||(34519540-34519594)
[»] chr8 (31 HSPs)
chr8 (58-232)||(7971000-7971181)
chr8 (55-165)||(3094653-3094764)
chr8 (59-165)||(27928017-27928124)
chr8 (59-232)||(41530645-41530826)
chr8 (55-166)||(21004362-21004473)
chr8 (55-166)||(31519967-31520079)
chr8 (59-165)||(44106199-44106306)
chr8 (59-159)||(8885535-8885636)
chr8 (55-165)||(37248530-37248641)
chr8 (64-159)||(28916764-28916860)
chr8 (63-165)||(34853309-34853411)
chr8 (99-159)||(40994809-40994869)
chr8 (55-165)||(16310571-16310682)
chr8 (65-159)||(35676620-35676715)
chr8 (59-228)||(36404177-36404337)
chr8 (59-165)||(42280967-42281077)
chr8 (99-232)||(24627584-24627725)
chr8 (99-232)||(31234737-31234875)
chr8 (59-165)||(9073480-9073587)
chr8 (77-140)||(11698387-11698451)
chr8 (15-57)||(31519378-31519420)
chr8 (180-232)||(31234526-31234578)
chr8 (67-165)||(17119956-17120055)
chr8 (173-232)||(24627874-24627933)
chr8 (15-58)||(41530571-41530614)
chr8 (17-59)||(21004294-21004336)
chr8 (195-232)||(10833523-10833560)
chr8 (99-165)||(4259712-4259778)
chr8 (15-57)||(21004944-21004986)
chr8 (15-51)||(7971218-7971254)
chr8 (75-166)||(33472059-33472151)
[»] chr7 (33 HSPs)
chr7 (55-166)||(8154871-8154983)
chr7 (55-165)||(24042264-24042375)
chr7 (55-166)||(47202466-47202578)
chr7 (59-165)||(3936084-3936191)
chr7 (59-165)||(28230544-28230651)
chr7 (59-165)||(43737100-43737207)
chr7 (59-166)||(36629181-36629289)
chr7 (55-165)||(42925717-42925828)
chr7 (64-165)||(37518371-37518473)
chr7 (55-164)||(3304835-3304946)
chr7 (69-165)||(19225674-19225771)
chr7 (55-166)||(31643013-31643125)
chr7 (59-161)||(36408347-36408450)
chr7 (59-165)||(36468613-36468719)
chr7 (55-150)||(33574125-33574221)
chr7 (77-165)||(31985594-31985685)
chr7 (99-165)||(7115347-7115413)
chr7 (69-137)||(42877149-42877218)
chr7 (178-232)||(5731193-5731247)
chr7 (59-165)||(6467671-6467780)
chr7 (69-118)||(9151800-9151850)
chr7 (17-59)||(47202398-47202440)
chr7 (15-57)||(47203112-47203154)
chr7 (77-166)||(33151200-33151292)
chr7 (68-121)||(28349174-28349227)
chr7 (59-103)||(28346123-28346167)
chr7 (17-57)||(31643672-31643712)
chr7 (15-57)||(8155523-8155565)
chr7 (180-229)||(5730987-5731036)
chr7 (99-152)||(26555130-26555183)
chr7 (180-232)||(8214298-8214350)
chr7 (15-59)||(24042401-24042444)
chr7 (23-59)||(31642951-31642987)
[»] chr6 (22 HSPs)
chr6 (55-166)||(32035085-32035197)
chr6 (55-157)||(33413431-33413533)
chr6 (59-165)||(17264386-17264493)
chr6 (55-165)||(5699530-5699641)
chr6 (59-165)||(7412804-7412910)
chr6 (70-165)||(3717359-3717455)
chr6 (66-165)||(14587636-14587736)
chr6 (55-165)||(23406768-23406879)
chr6 (55-165)||(2813300-2813413)
chr6 (59-165)||(1945606-1945712)
chr6 (65-161)||(9905100-9905197)
chr6 (59-157)||(4508386-4508485)
chr6 (59-165)||(24604438-24604545)
chr6 (99-165)||(5638879-5638945)
chr6 (15-59)||(5638781-5638825)
chr6 (180-232)||(17501175-17501227)
chr6 (182-232)||(17500967-17501017)
chr6 (99-165)||(21517557-21517623)
chr6 (69-167)||(29289701-29289799)
chr6 (15-59)||(33413559-33413603)
chr6 (127-165)||(2539496-2539534)
chr6 (17-57)||(32044847-32044887)
[»] chr3 (47 HSPs)
chr3 (59-232)||(45244365-45244541)
chr3 (64-166)||(35142055-35142158)
chr3 (59-216)||(48303967-48304131)
chr3 (55-166)||(47301991-47302103)
chr3 (67-165)||(47740008-47740107)
chr3 (64-165)||(39149791-39149892)
chr3 (55-165)||(50716224-50716335)
chr3 (55-165)||(50796512-50796623)
chr3 (59-165)||(46622860-46622968)
chr3 (71-165)||(34821419-34821514)
chr3 (59-165)||(51258378-51258485)
chr3 (59-165)||(51540690-51540797)
chr3 (55-166)||(2358697-2358810)
chr3 (99-230)||(32025000-32025137)
chr3 (64-165)||(38977824-38977926)
chr3 (57-165)||(3902882-3902991)
chr3 (55-165)||(501216-501328)
chr3 (75-167)||(52777223-52777315)
chr3 (55-152)||(3937360-3937458)
chr3 (64-165)||(33438503-33438604)
chr3 (59-159)||(3352148-3352249)
chr3 (55-166)||(28872975-28873087)
chr3 (59-128)||(34821509-34821579)
chr3 (173-232)||(8735278-8735337)
chr3 (173-232)||(9087519-9087578)
chr3 (99-166)||(43473044-43473111)
chr3 (60-157)||(49096311-49096409)
chr3 (77-165)||(30721881-30721974)
chr3 (173-232)||(45244691-45244750)
chr3 (15-57)||(2358105-2358147)
chr3 (15-57)||(3938812-3938854)
chr3 (15-59)||(33700659-33700703)
chr3 (17-59)||(48303895-48303937)
chr3 (59-111)||(47123082-47123135)
chr3 (59-111)||(47130448-47130501)
chr3 (17-57)||(8657750-8657790)
chr3 (17-57)||(51258307-51258347)
chr3 (17-59)||(2358836-2358879)
chr3 (181-232)||(8735493-8735544)
chr3 (181-232)||(9087734-9087785)
chr3 (68-103)||(42936685-42936720)
chr3 (17-59)||(3937292-3937334)
chr3 (17-59)||(43473162-43473204)
chr3 (17-59)||(52777145-52777187)
chr3 (59-99)||(33701457-33701497)
chr3 (19-59)||(42936575-42936615)
chr3 (68-104)||(42937052-42937088)
[»] chr4 (44 HSPs)
chr4 (55-166)||(23523886-23523998)
chr4 (59-167)||(48319139-48319247)
chr4 (64-166)||(17933212-17933315)
chr4 (55-165)||(25539024-25539135)
chr4 (59-165)||(40703648-40703755)
chr4 (59-167)||(54631537-54631646)
chr4 (59-165)||(19835504-19835611)
chr4 (55-165)||(38536150-38536261)
chr4 (55-165)||(55052695-55052806)
chr4 (59-159)||(7931642-7931743)
chr4 (69-165)||(25491471-25491568)
chr4 (55-159)||(29822599-29822704)
chr4 (66-165)||(25752520-25752620)
chr4 (55-150)||(32441791-32441887)
chr4 (55-166)||(49396988-49397100)
chr4 (70-165)||(8106387-8106483)
chr4 (75-166)||(34972864-34972956)
chr4 (59-165)||(3703326-3703433)
chr4 (55-133)||(6228919-6228998)
chr4 (64-165)||(46440350-46440452)
chr4 (55-164)||(6003748-6003860)
chr4 (59-165)||(2506107-2506215)
chr4 (59-158)||(38416549-38416649)
chr4 (89-158)||(41413183-41413252)
chr4 (59-121)||(50392529-50392592)
chr4 (64-124)||(53894108-53894169)
chr4 (180-232)||(25140723-25140775)
chr4 (103-165)||(31582498-31582560)
chr4 (17-59)||(34972786-34972828)
chr4 (15-57)||(34973494-34973536)
chr4 (118-232)||(7817367-7817486)
chr4 (180-232)||(25140514-25140566)
chr4 (17-59)||(6003886-6003928)
chr4 (17-59)||(6229024-6229066)
chr4 (137-232)||(7794211-7794312)
chr4 (15-57)||(27631859-27631901)
chr4 (17-59)||(32441723-32441765)
chr4 (180-230)||(42660385-42660435)
chr4 (15-52)||(6228307-6228344)
chr4 (15-59)||(55052832-55052875)
chr4 (173-216)||(50392453-50392496)
chr4 (15-53)||(3703469-3703507)
chr4 (15-57)||(23524418-23524460)
chr4 (15-51)||(41412706-41412742)
[»] scaffold0137 (1 HSPs)
scaffold0137 (59-165)||(9573-9680)
[»] scaffold0027 (1 HSPs)
scaffold0027 (67-165)||(142039-142138)
[»] scaffold0182 (1 HSPs)
scaffold0182 (59-165)||(23098-23205)
[»] scaffold0508 (1 HSPs)
scaffold0508 (69-165)||(3471-3568)
[»] scaffold0016 (1 HSPs)
scaffold0016 (173-232)||(205814-205873)


Alignment Details
Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 55 - 239
Target Start/End: Original strand, 26319052 - 26319236
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaa 154  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  26319052 aatggagttacggatttttccggattttgttatccggaaacttccaaaatagggtgcgttacatgatgtttccggattacataatccgaaaaccccctaa 26319151  T
Q  155 acaccattttttccatggtgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaacagtttcat 239  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  26319152 acacccttttttccatggtgcaatccggattacgtaatccgtacagcaccagcaccaaatctgaacatgtttgtaacagtttcat 26319236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 55 - 239
Target Start/End: Complemental strand, 37095101 - 37094912
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaa 154  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||  |||| ||||| ||| |||    
T  37095101 aatggagttacggatttttccggattttgtaatccgaaaacttaaaaaataaggcgcgttacatgatgtttccggattaccaaatccgaaaa-cccttaa 37095003  T
Q  155 acaccattttttccatggtgcaatccggattacgtaattcggaca------gcaccagcaccaattctgaacatgtttgtaacagtttcat 239  Q
    ||||| |||||||||||||||||||||||||||||||| || |||      ||||||||||||||||||||||||||||||||||||||||    
T  37095002 acacccttttttccatggtgcaatccggattacgtaatccgaacagcaactgcaccagcaccaattctgaacatgtttgtaacagtttcat 37094912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 15799159 - 15799270
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15799159 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaacccccta 15799258  T
Q  154 aacaccattttt 165  Q
    |||||| |||||    
T  15799259 aacacccttttt 15799270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 6156665 - 6156770
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  6156665 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacccccta 6156764  T
Q  154 aacacc 159  Q
    ||||||    
T  6156765 aacacc 6156770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 25746964 - 25747071
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac 158  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| |||||||||||    
T  25746964 gagtaacggatttttccggattttctaatccggaaacttcaaaaatagggcgcgttacatgatgttttcggattacataatccggaaatcccctaaacac 25747063  T
Q  159 catttttt 166  Q
    ||||||||    
T  25747064 catttttt 25747071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 26190485 - 26190373
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||    ||||||||||    
T  26190485 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgttttcggattacataattcagaaacccccta 26190386  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  26190385 aacaccctttttt 26190373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 20891551 - 20891658
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  20891551 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttccgaattacataatccgaaaaccccctaaaca 20891650  T
Q  158 ccattttt 165  Q
    || |||||    
T  20891651 cccttttt 20891658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 4064907 - 4064796
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||||| | ||||||||||    
T  4064907 aatggagttacgggtttttccggattatgtaatccggaaactttaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaacccccta 4064808  T
Q  154 aacaccattttt 165  Q
    |||||| |||||    
T  4064807 aacacccttttt 4064796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 75 - 216
Target Start/End: Original strand, 34440688 - 34440837
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc--attttttccatgg 172  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||   |||||| |||||    
T  34440688 cggattttgtaatccgaaaacttcaaaaataggacgcgttacatgatgttttcggattgcataatccgaaaaccccctaaacaccctttttttttcatgg 34440787  T
Q  173 ------tgcaatccggattacgtaattcggacagcaccagcaccaattct 216  Q
          ||||||| |||||||||||||| |||||  ||||||||||||||    
T  34440788 tgctgatgcaatctggattacgtaattcagacagtgccagcaccaattct 34440837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 38871609 - 38871708
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  38871609 gagtaacggatttttccggattttgtaatccgaaaacttcataaaatagggggcgttacatgatgtttccggattacataatccgaaaaccctctaaaca 38871708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 12465293 - 12465185
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||| | ||| ||||||    
T  12465293 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggatta---aatccggaaa-ccccta 12465198  T
Q  154 aacaccatttttt 166  Q
    |||||||||||||    
T  12465197 aacaccatttttt 12465185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 40620165 - 40620066
Alignment:
Q  67 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||| |||||||||||||| | |||||||||||||| |||||||    
T  40620165 gatttttccggattttgtaatccggaaacttcaaaaaatagggcacgttatatgatgttttcggattacataatccggaaaccccctaaacatcattttt 40620066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 232
Target Start/End: Original strand, 38640676 - 38640839
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggt 173  Q
    |||||||| ||||| |||||  ||||||| |||||||||||| ||||| | | |||||||||||||| ||| ||||| |||||||| |||||| ||||||    
T  38640676 cggattttataatctggaaatctcaaaaaatagggcgcgttaaatgatttattcggattacataatccgaacacccc-taaacaccctttttttcatggt 38640774  T
Q  174 gc------aatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||      ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  38640775 gctgatgcaatccggattacgtaatccggacagcaccaacaccaattctgaacatgtttataaca 38640839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 39524721 - 39524821
Alignment:
Q  66 ggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttt 164  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||||  | |||||||||||||||| ||||    
T  39524721 ggatttttccggattttgtaatccggaaacttaaaaaaatagggcgtgttacatgatgttttcggattacataattcggaaaccccctaaacaccctttt 39524820  T
Q  165 t 165  Q
    |    
T  39524821 t 39524821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 165
Target Start/End: Original strand, 14111851 - 14111942
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||    
T  14111851 cggattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttttggattacataatctgaaaatcccctaaacacccttttt 14111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 28083561 - 28083454
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||| | |||||| |||||||    
T  28083561 gagtaacgggtttttccggattttgtaatccggaaaattcaaaaaatagggcgcattacatgatatttccggattacataatccggaaaccctctaaaca 28083462  T
Q  158 ccattttt 165  Q
    || |||||    
T  28083461 cccttttt 28083454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 15957694 - 15957788
Alignment:
Q  66 ggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 159  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||| |||||| | ||||||||||||||||    
T  15957694 ggatttttccggattttgtaattcggaaacttcgaaaaatagggcgtattacatgatgtttccggattaaataatccggaaaccccctaaacacc 15957788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 36359769 - 36359604
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||||||||| |||| ||||||||||||||| ||||  ||||||| |||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  36359769 gagttacggaatttttcggattttgtaatccagaaatctcaaaaaataggacgcgtaacatgattttttcggattacataatctgaaaaccccctaaaca 36359670  T
Q  158 cc-attttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattct 216  Q
    ||  |||||| |||||      |||||||| ||||||||||| | |||| ||||| ||||||||||    
T  36359669 cctttttttttcatggtgttgatgcaatccagattacgtaatccagacaacaccatcaccaattct 36359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 33487544 - 33487649
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||| |||||||||| | |||| |||||    
T  33487544 aatggagttacgggtttttccgaattttgtaatccgaaaacttcaaaaaatagggcgcgttatatgatgttttcgggttacataatccggaaactcccta 33487643  T
Q  154 aacacc 159  Q
    ||||||    
T  33487644 aacacc 33487649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 38372247 - 38372354
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||  | ||||||| |||| |    
T  38372247 gagtaacggatttttctggattttgtaatccggaaacttaaaaaaatagggcgggttacatgatgtttccggattacataattcggaaaccccttaaata 38372346  T
Q  158 ccattttt 165  Q
    || |||||    
T  38372347 cccttttt 38372354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 38692955 - 38692859
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||| |||||    
T  38692955 tttttccgaattttgtaatccggaaacttaaaaaaatagggcgcgttacgtgatgtttccggattacataatccggaaa-cccctaaacacccttttt 38692859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 24203826 - 24203759
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttttt 166  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  24203826 aaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttt 24203759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 32842149 - 32842048
Alignment:
Q  65 cggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattt 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| || || || ||||  |||||||||||| ||| ||||| |||||||| |||    
T  32842149 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacacccttt 32842050  T
Q  164 tt 165  Q
    ||    
T  32842049 tt 32842048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 8032217 - 8032316
Alignment:
Q  67 gatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||| |||||||||||||| ||||| ||||||| ||||||| | ||||||||| |||||||||||||||||| ||| ||| |||||||||| |||||    
T  8032217 gattttttcggattttgtaatctggaaatttcaaaaaatagggcacattacatgatttttccggattacataatccgaacacctcctaaacacccttttt 8032316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 29862591 - 29862657
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  29862591 aaaaatagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccattttt 29862657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 31221504 - 31221415
Alignment:
Q  77 gattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||| ||||||||| |||||||||||| || |||||||||||||||||||| ||||||||||||| | |||||| ||||||||| |||||    
T  31221504 gattctgtaatccgaaaacttcaaaaaatatggcgcgttacatgatgtttctggattacataatccggaaaccctctaaacacccttttt 31221415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 38640988 - 38641047
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  38640988 tgcaatctggattacataattcggacagcaccaacaccaattctgaacatgtttgtaaca 38641047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 43388252 - 43388073
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattaca-taatctgaaaaccccctaaac 156  Q
    |||||||||||| ||  ||||||||||||||||||| ||  ||||||||||||| |||||||||  |  |  || | | ||||| ||||||| |||||||    
T  43388252 gagttacggattcttttggattttgtaatccggaaatctaaaaaaatagggcgcattacatgataatcac--atcaaaataatccgaaaacctcctaaac 43388155  T
Q  157 accattttttccatggtgc------aatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||| |||||| ||||||||      ||||||||||||||||||| ||||| |||| |||||||||||||||| ||| |||||    
T  43388154 accctttttttcatggtgctgatgcaatccggattacgtaattcagacagtaccaacaccaattctgaacatatttataaca 43388073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 37183957 - 37183856
Alignment:
Q  67 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||  ||||||||||||  ||||||||||||| |||||| ||||||||||| ||| | |||||||||||| | |||||| ||||||||| |||||    
T  37183957 gatttttctagattttgtaatcttgaaacttcaaaaaatagggcacgttacatgatattttcagattacataatccggaaaccctctaaacacccttttt 37183858  T
Q  166 tc 167  Q
    ||    
T  37183857 tc 37183856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 232
Target Start/End: Complemental strand, 28445578 - 28445413
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccc--cctaaacaccattttttccatg 171  Q
    |||||||||||||||| |||  ||||||| ||||||||| || ||||  ||| | ||||| | |||| ||| ||||  |||||||||||||||||| |||    
T  28445578 cggattttgtaatccgaaaatctcaaaaaatagggcgcgctaaatgaatttttcagattataaaatccgaacaccctccctaaacaccattttttc-atg 28445480  T
Q  172 gt------gcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||      ||| | ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  28445479 gtaccgatgcagttcggattacgtaatccggacatcaccagcacgaattctgaacatgtttgtaaca 28445413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 27212646 - 27212753
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    ||||||||| ||||| |||||||||||||||| |||  ||||||| ||||| |||||||||||| ||| |||||||||||| | ||| || |||| ||||    
T  27212646 gagttacgggttttttcggattttgtaatccgaaaatctcaaaaaatagggtgcgttacatgattttttcggattacataaccagaacacaccctgaaca 27212745  T
Q  158 ccattttt 165  Q
    || |||||    
T  27212746 cccttttt 27212753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 8739255 - 8739196
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||| ||||||||||||| |  || |||||||||||||||||||||||||||||||||    
T  8739255 tgcaattcggattacgtaatccaaactgcaccagcaccaattctgaacatgtttgtaaca 8739196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 31929289 - 31929229
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacat 118  Q
    |||| |||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||    
T  31929289 gagtaacggatttttccggattttgtaatccagaaatttcaaaaaatagggcgcattacat 31929229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 4064976 - 4064933
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  4064976 tccaaaaatgcccttgag-tttccggatttcataatccggaatgg 4064933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 16429133 - 16429185
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||||||||| |  ||||||||| |||||||||| |||||||||||||||    
T  16429133 cggattacgtaatccaaacagcaccaacaccaattctaaacatgtttgtaaca 16429185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 26318982 - 26319026
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||    
T  26318982 tccaaaaatgcccttgcggtttccggatttcataattcggaatgg 26319026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 26095035 - 26095129
Alignment:
Q  65 cggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac 158  Q
    ||||||||| | |||||||||||||  ||||  |||||| ||| |||||||||||  | ||| |||||||||||||| ||| ||||| |||||||    
T  26095035 cggattttttctgattttgtaatccaaaaaccacaaaaaatagagcgcgttacatatttttttcggattacataatccgaacaccccataaacac 26095129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 37095168 - 37095126
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||||||||  | |||||||||||||||||||    
T  37095168 caaaaatgcccttgaggttttcgaatttcataatccggaatgg 37095126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 12464598 - 12464638
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    ||||||||| |||||| ||||||||||| ||||||||||||    
T  12464598 caaaaatgctcttgagatttctggattttataatccggaat 12464638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 232
Target Start/End: Original strand, 16429367 - 16429395
Alignment:
Q  204 cagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||||||||||||||||||||||||    
T  16429367 cagcaccaattctgaacatgtttgtaaca 16429395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 24471481 - 24471316
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccc-taaacaccattttttccatggt 173  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  24471481 cggattttgtaatccagaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaacccccctaaacacccttttttccatggt 24471382  T
Q  174 gcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaacagtttcat 239  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24471381 gtaatccggattacgtaattcggacagcaccagcatcaattctgaacatgtttgtaacagtttcat 24471316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 30829632 - 30829468
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggtg 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  30829632 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgttttcggattacataatccgaaaaccccctaaacacccttttttccatggtg 30829533  T
Q  175 caatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaacagtttcat 239  Q
    ||||||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  30829532 caatccaaattacgtaatccggacagcaccagcaccgattctgaacatgtttgtaacagtttcat 30829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 43319379 - 43319199
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  43319379 gagttacggatttttccggattttgtaatccggaaatctaaaaaaatatggcgcgttacatgattttttcggattacataatccgaaaaccccctaaaca 43319280  T
Q  158 ccattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |  |||||| |||||      |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  43319279 ctctttttttcatggtgctgatgcaatccggattacgtaatccggacagcaccatcaccaattctgaacatgtttgtaaca 43319199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 33611597 - 33611485
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33611597 aatggagttacggattttttcggattttgtaatttggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaacccccta 33611498  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  33611497 aacaccctttttt 33611485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 18583731 - 18583619
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||| ||||||||| ||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  18583731 aatgaagttacggacttttccggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaacccccta 18583632  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  18583631 aacaccttttttt 18583619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 32817794 - 32817687
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  32817794 gagtaacgggtttttccagattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccctaaaca 32817695  T
Q  158 ccattttt 165  Q
    || |||||    
T  32817694 cccttttt 32817687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 42545948 - 42546050
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 162  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||| ||||||||||||| |||| ||    
T  42545948 acggatttttccggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggataacatgatccgaaaaccccctaagcaccctt 42546047  T
Q  163 ttt 165  Q
    |||    
T  42546048 ttt 42546050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 34162894 - 34162797
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  34162894 tttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacacccttttt 34162797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 23442710 - 23442822
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||  | |||||||| |    
T  23442710 aatggagttacggatttttccggattttataatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataattcggaaacccccca 23442809  T
Q  154 aacaccatttttt 166  Q
    |||| | ||||||    
T  23442810 aacatcttttttt 23442822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 17000351 - 17000461
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaa-aatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||||| ||||||||||||| | ||||||||||    
T  17000351 aatggagttacgg-tttttccggattttgtaattcggaaacatcaaataatagggcacgttagatgatgtttctggattacataatccggaaacccccta 17000449  T
Q  154 aacaccattttt 165  Q
    ||||||||||||    
T  17000450 aacaccattttt 17000461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 40650858 - 40650751
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| | ||||||| ||||||    
T  40650858 gagtaacggattttttcggaatttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttctggattacataatccggaaaccccttaaaca 40650759  T
Q  158 ccattttt 165  Q
    ||||||||    
T  40650758 ccattttt 40650751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 49786241 - 49786352
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||||||||| |||||||||||||||||| |||||| |||||| ||||| |||| |||||||||||||||||||||||||||||||| | |||||||| |    
T  49786241 aatggagttatggatttttccggattttgcaatccgaaaactttaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccc-a 49786339  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  49786340 aacaccctttttt 49786352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 28866806 - 28866707
Alignment:
Q  66 ggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||||||||||||||||||||||   | |||||||||||||| |||||||| |||||||||||||||||||||| |||| ||||||||| |||||    
T  28866806 ggatttttccggattttgtaatccggaactataaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacacccttttt 28866707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 15070025 - 15069917
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataat-ctgaaaaccccctaaac 156  Q
    |||| |||||| ||| ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||| ||||| | |||| ||||||||||    
T  15070025 gagtaacggatattttcggattttgtaatccggaaacttcaaaaaataggacgtgttacatgatgtttccggattatataatccggaaacccccctaaac 15069926  T
Q  157 accattttt 165  Q
    |||||||||    
T  15069925 accattttt 15069917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 41584857 - 41584754
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||| |||||||| |||||| ||||||||||||||||||| |||||||| ||||||  |||||||||||||| |||||||||||||| | ||||||||||    
T  41584857 aatgaagttacgggtttttctggattttgtaatccggaaatttcaaaaactagggcatgttacatgatgttttcggattacataatccggaaacccccta 41584758  T
Q  154 aaca 157  Q
    ||||    
T  41584757 aaca 41584754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 44573271 - 44573172
Alignment:
Q  67 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| | ||| ||| ||||| || |||||    
T  44573271 gattttttcggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaatcccttaaactcctttttt 44573172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 49677478 - 49677560
Alignment:
Q  78 attttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 159  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  49677478 attttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccagaaaccccctaaacacc 49677560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 45047033 - 45046933
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||| ||||| | |||||||||||||||| ||||||||||| | ||||||||||||||    
T  45047033 gagtaacggatttttccggattttgtaatccgaaaacttcaaaaaagagggc-cattacatgatgtttccgaattacataatccggaaaccccctaaaca 45046935  T
Q  158 cc 159  Q
    ||    
T  45046934 cc 45046933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 40908117 - 40908009
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||  | |||||| ||||||||||||||||||| | ||||| | |||||||||||| |||||||||||||| ||||||||||||||||    
T  40908117 gagtaacggattttttagaattttgcaatccggaaacttcaaaaaattgggcgtgctacatgatgttttcggattacataatccgaaaaccccctaaaca 40908018  T
Q  158 ccatttttt 166  Q
    || ||||||    
T  40908017 ccctttttt 40908009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 7011195 - 7011293
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaaata--gggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||| |||||||||||||||||||||||||||| |  ||||||||||||||||||||||| || |  ||||| |||||||||||||||| |||||||    
T  7011195 tttttctggattttgtaatccggaaacttcaaaaaaaaagggcgcgttacatgatgtttccgaatcatgtaatccgaaaaccccctaaacatcattttt 7011293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 45568059 - 45567952
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||| ||||||||| |||||||| |||  ||||||||| ||| ||||||||||||||||    
T  45568059 gagtaacgggtttttccgaattttgtaattcggaaacttcaaaaaatagggcgcgctacatgatatttttggattacatgatccgaaaaccccctaaaca 45567960  T
Q  158 ccattttt 165  Q
    || |||||    
T  45567959 cccttttt 45567952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 32542388 - 32542473
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 159  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||||   ||||||||||||||||    
T  32542388 cggattttgtaatccggaatcttcaaaaaatagggtgcgttacatgatgtttacggattacataatccagaaaccccctaaacacc 32542473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 165
Target Start/End: Original strand, 34006246 - 34006342
Alignment:
Q  70 ttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| | |||||||| ||||||||||||||||| |||| ||||| |||||||| |||||    
T  34006246 ttttccggattttttaatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacacccttttt 34006342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 232
Target Start/End: Complemental strand, 800969 - 800806
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttcca---- 169  Q
    |||||||||||||||| |||  ||||||| |||||||| |||  |||| ||| ||||||| | |||| ||| |||||||||||||||||||||           
T  800969 cggattttgtaatccgaaaatctcaaaaaatagggcgctttatttgattttttcggattatagaatccgaacaccccctaaacaccatttttttatggtg 800870  T
Q  170 -tggtgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
     |||||   ||||||||||||||  ||||| ||||||||||||||||||||||||||| |||||    
T  800869 ttggtgatgtccggattacgtaacgcggactgcaccagcaccaattctgaacatgtttataaca 800806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 38950255 - 38950361
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac 158  Q
    ||||||||||||||||| |||||||||||||         ||||||||||||||||||||||| ||| | |||||||||||| |||||| ||||||||||    
T  38950255 gagttacggatttttccagattttgtaatcc---------aaaaatagggcgcgttacatgattttttcagattacataatccgaaaactccctaaacac 38950345  T
Q  159 cattttttccatggtg 174  Q
      |||||| |||||||    
T  38950346 tctttttttcatggtg 38950361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 43319047 - 43318988
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  43319047 tgcaatccggattacgtaatctggacaacaccagcaccaattctgaacatgtttgtaaca 43318988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 26723660 - 26723564
Alignment:
Q  65 cggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattt 163  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||| | |||||||| ||||||     ||||||| ||| |||||||||||||| |||    
T  26723660 cggatttttttggattttgtaatccggaaacttcaaaaaatagggcg-gctacatgatttttccg-----cataatccgaacaccccctaaacacccttt 26723567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 33611665 - 33611623
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  33611665 caaaaatgcccttgaggtttctggatttcataatccagaatgg 33611623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 6223921 - 6223821
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa--tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaac 156  Q
    ||||||||||||||| || |||||  |||||| ||||||||||||  ||| |||| ||||||||| |||  ||||||||||||| ||| ||||| |||||    
T  6223921 gagttacggattttttcgaatttttcaatccgaaaacttcaaaaaaatagagcgcattacatgatttttttggattacataatccgaacaccccataaac 6223822  T
Q  157 a 157  Q
    |    
T  6223821 a 6223821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 9446155 - 9446103
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||| |||||    
T  9446155 cggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataaca 9446103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 24471561 - 24471517
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  24471561 tccaaaaatgtccttgaggtttccggatttcataatccggaatgg 24471517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 27794831 - 27794903
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggat 131  Q
    |||||| |||||||| | |||||||||||||| |||  ||||||||||||||| ||||||||| ||| |||||    
T  27794831 gagttatggattttttcagattttgtaatccgaaaatctcaaaaatagggcgctttacatgattttttcggat 27794903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 52745000 - 52744937
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgat 121  Q
    |||| ||||||||||||| ||||||||||| | |||||||| ||||||||||||| ||||||||    
T  52745000 gagtaacggatttttccgaattttgtaatctgaaaacttcaaaaaatagggcgcgctacatgat 52744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 18583799 - 18583757
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  18583799 caaaaatgcccttgaggttttcggatttcataatccggaatgg 18583757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 30829710 - 30829668
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  30829710 caaaaatgcccttgaagtttccggatttcataatccggaatgg 30829668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 32542310 - 32542352
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  32542310 caaaaatgccattgaggtttccggatttcataatccggaatgg 32542352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 32542881 - 32542839
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  32542881 tccaaaaatacccttgaggtttccggatttcataatccggaat 32542839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 49786949 - 49786907
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  49786949 tccaaaaatgtccttgaggtttccggatttcataatccggaat 49786907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 23442642 - 23442683
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatg 58  Q
    ||||||||||||||||||||| ||||||||| ||||||||||    
T  23442642 caaaaatgcccttgaggtttccggatttcattatccggaatg 23442683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 9445945 - 9445897
Alignment:
Q  181 ggattacgtaattcggacagcaccagcaccaattctgaacatgtttgta 229  Q
    |||||||||||| |||||| |||||||||||||||| ||||| ||||||    
T  9445945 ggattacgtaatccggacaacaccagcaccaattctaaacatctttgta 9445897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 38885245 - 38885310
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||| |||||| ||||||||||||||| | ||||||||||| | ||||||| |||||||| |||||    
T  38885245 aaaaagagggcgtgttacatgatgtttcag-attacataatccggaaaccccttaaacacccttttt 38885310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 800652 - 800603
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgta 229  Q
    ||||||||||||| |||||| ||||| |||||||||  ||||||||||||    
T  800652 cggattacgtaatccggacaacaccaacaccaattcaaaacatgtttgta 800603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 17000282 - 17000325
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||    
T  17000282 tccaaaaatgcccttgagttttc-ggatttcataatccagaatgg 17000325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 34162978 - 34162935
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||    
T  34162978 tccaaaaatacccttgag-tttccggatttcataatccggaatgg 34162935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 44937783 - 44937823
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    |||||||||| |||||||||  |||||||||||||||||||    
T  44937783 caaaaatgccgttgaggttttcggatttcataatccggaat 44937823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 6e-58; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 75 - 239
Target Start/End: Original strand, 33366920 - 33367085
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc-attttttccatggt 173  Q
    |||||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||||||||| ||||||||||| ||||||  |||||||||||||    
T  33366920 cggattttgtaatccgaaaacttcaaaaataagacgcgttacatgatatttccggattacataatccgaaaacccccttaacaccttttttttccatggt 33367019  T
Q  174 gcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaacagtttcat 239  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||    
T  33367020 gcaaaccggattacgtaatccggatagcaccagcaccaattctgaacatgtttgtaatagtttcat 33367085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 36949127 - 36949018
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  36949127 aatggagttacggatttttccggattttgtaatctgcaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaacccccta 36949028  T
Q  154 aacaccattt 163  Q
    ||||||||||    
T  36949027 aacaccattt 36949018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 17474977 - 17474870
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  17474977 gagtaacggatttttccggattttgtaatccggaaactttaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 17474878  T
Q  158 ccattttt 165  Q
    | ||||||    
T  17474877 caattttt 17474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 41510606 - 41510505
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  41510606 gagtaacggatttttccagatttcgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatctggaaaccccctaaaca 41510507  T
Q  158 cc 159  Q
    ||    
T  41510506 cc 41510505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 15995287 - 15995184
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaaa--tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccat 161  Q
    |||| |||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |    
T  15995287 acgggtttttccggattttgtaatcgggaaacttcaaaaaaatagggcgcgttgcatgatgtttccggattacataatccgaaaaccccctaaacaccct 15995188  T
Q  162 tttt 165  Q
    ||||    
T  15995187 tttt 15995184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 39447138 - 39447245
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  39447138 gagtaacggatttttccggattttgtaatccgaaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatctggaaaccccataaaca 39447237  T
Q  158 ccattttt 165  Q
    || |||||    
T  39447238 cccttttt 39447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 32188047 - 32187940
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| |||||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |||||||| |||||    
T  32188047 gagtaacgggtttttctggattttgtaatctggaaacttcaaaaaatagggcgagttacatgatgtttccggattacataatccggaaacccccgaaaca 32187948  T
Q  158 ccattttt 165  Q
    ||||||||    
T  32187947 ccattttt 32187940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 33452621 - 33452514
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||| |||||||||    
T  33452621 gagtaacggatttttctggattttgtaattcggaaacttcaaaaaatagggcgcgttacatgatgtttccggatcacataatccggaaactccctaaaca 33452522  T
Q  158 ccattttt 165  Q
    || |||||    
T  33452521 cccttttt 33452514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 45153969 - 45153862
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| |||||| | ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  45153969 gagtaacgggtttttctgaattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 45153870  T
Q  158 ccattttt 165  Q
    || |||||    
T  45153869 cccttttt 45153862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 25217968 - 25217868
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  25217968 gagtaacggattttttcggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatccggaaa-cccctaaaca 25217870  T
Q  158 cc 159  Q
    ||    
T  25217869 cc 25217868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 44465906 - 44465798
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgat-gtttccggattacataatctgaaaaccccctaaac 156  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||| || | |||||||||||||    
T  44465906 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatagtttatggattacatactccggaaaccccctaaac 44465807  T
Q  157 accattttt 165  Q
    ||| |||||    
T  44465806 acccttttt 44465798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 165
Target Start/End: Original strand, 36874977 - 36875068
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | |||||| || ||||||||||||    
T  36874977 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccattttt 36875068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 4268406 - 4268309
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  4268406 ttttttcggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacacccttttt 4268309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 231
Target Start/End: Complemental strand, 9847603 - 9847424
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    ||||||| ||||||||| |||||||||||||| |||  ||||||| | |||||||||||||||| ||| || ||||||||||| ||| |||  | |||||    
T  9847603 gagttactgatttttccagattttgtaatccgaaaatctcaaaaaattgggcgcgttacatgattttttcgtattacataatccgaacaccatccaaaca 9847504  T
Q  158 ccattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaac 231  Q
    || |||||| |||||      ||||||| ||||||||||||  ||||||||||| |||||||||| ||||| ||||||||    
T  9847503 ccttttttttcatggtgctgatgcaatctggattacgtaatctggacagcaccaacaccaattctaaacatatttgtaac 9847424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 41855061 - 41854970
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||| ||| | |||||||||||||||| |||||    
T  41855061 cggattttgtaatccggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacatgatccggaaaccccctaaacacccttttt 41854970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 165
Target Start/End: Original strand, 42894369 - 42894460
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||| | |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  42894369 cggattatataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccattttt 42894460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 25715351 - 25715510
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttc 167  Q
    ||||| |||| ||||||||||  |||  |||||| |||||||||||||| |||| ||| |||||||||||||| ||| ||     ||||||||||||||     
T  25715351 ttttttcggactttgtaatccaaaaatctcaaaagatagggcgcgttacctgattttttcggattacataatccgaacac-----aaacaccattttttt 25715445  T
Q  168 catggtgc------aatccggattacgtaattcggacagcaccagcaccaattctgaacatgttt 226  Q
    ||||||||      ||||||||||||||||| |||||| ||||| |||||||||| |||||||||    
T  25715446 catggtgctgatgcaatccggattacgtaatccggacaacaccaacaccaattctaaacatgttt 25715510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 41203358 - 41203258
Alignment:
Q  65 cggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttt 164  Q
    |||||||||||||||||||||||||||||||| |||||| |  | | | ||||| || |||| ||||||||||||| ||| ||||| |||||||| ||||    
T  41203358 cggatttttccggattttgtaatccggaaactacaaaaaaatagggtgctacataatttttctggattacataatccgaacaccccgtaaacaccctttt 41203259  T
Q  165 t 165  Q
    |    
T  41203258 t 41203258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 9847274 - 9847215
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||    
T  9847274 tgcaatccggattacgtaatctggacaacaccaacaccaattctgaacatgtttgtaaca 9847215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 34517077 - 34517183
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||||||| |||||| ||||||||||||||   ||| ||  ||||||||||||||||||||||| ||| ||||||||||||||  || ||||| ||||||    
T  34517077 gagttacgaattttttcggattttgtaatcgaaaaatctcaaaaaatagggcgcgttacatgat-ttttcggattacataatccaaataccccttaaaca 34517175  T
Q  158 ccattttt 165  Q
    ||||||||    
T  34517176 ccattttt 34517183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 5507392 - 5507495
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatga--tgtttccggattacataatctgaaaaccccctaaa 155  Q
    ||||||| ||||||| || ||||||||||||  ||||||| ||||||| | ||||||||||||  | ||| ||||||| |||||| ||| ||||||||||    
T  5507392 gagttacagattttttcgaattttgtaatccaaaaacttcaaaaaataagacgcgttacatgattttttttcggattatataatccgaacaccccctaaa 5507491  T
Q  156 cacc 159  Q
    ||||    
T  5507492 cacc 5507495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 38308954 - 38308875
Alignment:
Q  77 gattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaa 155  Q
    |||| ||||||||| |||||||||||| ||||||||| ||  |||| ||||||||||| |||||| ||| ||||| ||||    
T  38308954 gattatgtaatccgaaaacttcaaaaaatagggcgcgctatttgatttttccggattatataatccgaacaccccttaaa 38308875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 25715267 - 25715309
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||    
T  25715267 caaaaatgcccttgaagtttccggattttataatccggaatgg 25715309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 34519594 - 34519540
Alignment:
Q  178 tccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||||||||||| |  || |||||| || |||||||||||||||||||||||    
T  34519594 tccggattacgtaatccaaactgcaccaacatcaattctgaacatgtttgtaaca 34519540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 58 - 232
Target Start/End: Complemental strand, 7971181 - 7971000
Alignment:
Q  58 ggagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatg-tttccggattacataatctgaaaaccccctaaac 156  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||| |||| |||||||||||||  || ||||| |||||    
T  7971181 ggagttacggatttttccggattttgtaatctggaaacttcaaaaataggacgcgctacgtgatgttttctggattacataatccaaacaccccataaac 7971082  T
Q  157 accattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||| ||||||||||||      |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  7971081 acccttttttccatggtgctgatgcaatccggattacgtaatccggacagcaccagcatcaattctgaacatgtttgtaaca 7971000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 3094653 - 3094764
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  3094653 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccggattacataatccggaaacccccta 3094752  T
Q  154 aacaccattttt 165  Q
    ||||||||||||    
T  3094753 aacaccattttt 3094764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 27928124 - 27928017
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  27928124 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcaggaaaccccctaaaca 27928025  T
Q  158 ccattttt 165  Q
    ||||||||    
T  27928024 ccattttt 27928017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 59 - 232
Target Start/End: Original strand, 41530645 - 41530826
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatga-tgtttccggattacataatctgaaaaccccctaaac 156  Q
    |||||||||||||||||| ||||||||||||||||| ||  |||||||||||||||||||||| | ||| | |||||||||||||||| ||||||||||     
T  41530645 gagttacggatttttccgaattttgtaatccggaaatctcaaaaaatagggcgcgttacatgatttttttcagattacataatctgaacaccccctaaaa 41530744  T
Q  157 accattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||| |||||| |||||      |||||||||||||||||||| |||||| ||||| |||||||| |||||||||||||||||    
T  41530745 accctttttttcatggtgctgttgcaatccggattacgtaatccggacatcaccatcaccaattttgaacatgtttgtaaca 41530826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 21004362 - 21004473
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaac-ttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||||||| |||||| |||||    
T  21004362 aatggagttacggatttttccggattttgtaatccggaaactttaaaaaataaggcgcgttacat-atgtttccggattacataatccgaaaactcccta 21004460  T
Q  154 aacaccatttttt 166  Q
    |||||||||||||    
T  21004461 aacaccatttttt 21004473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 31520079 - 31519967
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  31520079 aatggagttacggctttttccggattttgtaatccagaaacttcaaaaaatagagcgcgttacatgatgtttccggattacataatccggaaacccccta 31519980  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  31519979 aacaccctttttt 31519967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 44106199 - 44106306
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  44106199 gagtaacggatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 44106298  T
Q  158 ccattttt 165  Q
    || |||||    
T  44106299 cccttttt 44106306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 8885636 - 8885535
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  8885636 gagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 8885537  T
Q  158 cc 159  Q
    ||    
T  8885536 cc 8885535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 37248530 - 37248641
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| |||||| ||||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||   ||||||||||    
T  37248530 aatggagttacgggtttttctggattttgtaatccgaaaacttaaaaaaatagggcgcgttagatgatgtttccggattacataatccagaaacccccta 37248629  T
Q  154 aacaccattttt 165  Q
    ||||||||||||    
T  37248630 aacaccattttt 37248641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 28916764 - 28916860
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 159  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| | | ||||||||||||||||    
T  28916764 acgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaaatgatgtttctggattacataaaccggaaaccccctaaacacc 28916860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 34853309 - 34853411
Alignment:
Q  63 tacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccat 161  Q
    ||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| |    
T  34853309 tacgggtttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttccggattaca-aatctggaaaccctctaaacaccct 34853407  T
Q  162 tttt 165  Q
    ||||    
T  34853408 tttt 34853411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 40994809 - 40994869
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40994809 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 40994869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 16310571 - 16310682
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||| | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||||||||| ||||   |||| |||||    
T  16310571 aatggagttacaggtttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttagatgatttttccggattacacaatccagaaactcccta 16310670  T
Q  154 aacaccattttt 165  Q
    |||||| |||||    
T  16310671 aacacccttttt 16310682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 35676715 - 35676620
Alignment:
Q  65 cggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 159  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| || ||||| |||||||||||||||||| ||| ||||||||| ||||    
T  35676715 cggatttttccggattttgtaatccggaaactacaaaaaatagggcgcgctatatgatttttccggattacataatccgaacaccccctaaccacc 35676620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 36404337 - 36404177
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||||||||||| ||||||||||||||||||| ||| ||  |||||||||||| |||||||||| ||| ||||||| |||||| ||||| | ||||||||    
T  36404337 gagttacggattattccggattttgtaatccgaaaatctcaaaaaatagggcgtgttacatgat-ttttcggattatataatccgaaaa-ctcctaaaca 36404240  T
Q  158 ccattttttccatggtgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgt 228  Q
    || |||||| ||||||||        | | | ||| |||||||||||||||||||||||||||||||||||    
T  36404239 ccctttttttcatggtgc--------tgatgcaatccggacagcaccagcaccaattctgaacatgtttgt 36404177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 42281077 - 42280967
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacat---gatgtttccggattacataatctgaaaaccccctaa 154  Q
    |||| |||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||   ||||||||| |||||||||||| | |||||||||||    
T  42281077 gagtaacggatttttccggatttcgtaatccgaaaacttcaaaaaatagagcgcgttacatcatgatgtttccagattacataatccggaaaccccctaa 42280978  T
Q  155 acaccattttt 165  Q
    ||||| |||||    
T  42280977 acacccttttt 42280967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 24627584 - 24627725
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttc--catggtgc------aatccggattacgta 190  Q
    ||||||||| |||| ||  |||| ||| ||||||| | |||| ||| |||||||||||||||||||||   ||||||||      |||||||||||||||    
T  24627584 aaaaataggacgcgctatttgattttttcggattatagaatccgaataccccctaaacaccatttttttttcatggtgctgatgcaatccggattacgta 24627683  T
Q  191 attcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    || |||||| ||||||||||||||||||| ||||||||||||    
T  24627684 atccggacaacaccagcaccaattctgaatatgtttgtaaca 24627725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 31234875 - 31234737
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggt------gcaatccggattacgtaat 192  Q
    |||||||||||||| || || || ||| ||||||| | |||| ||| | |||||||||||||||||||| |||||      ||| | |||||||||||||    
T  31234875 aaaaatagggcgcgctatataattttttcggattatagaatccgaacaacccctaaacaccattttttc-atggtactgatgcagttcggattacgtaat 31234777  T
Q  193 tcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
     |||||||||| ||||||||||||||||||||| ||||||    
T  31234776 ccggacagcactagcaccaattctgaacatgttcgtaaca 31234737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 9073480 - 9073587
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||| |||| |||||||  |||||||||||||||||||| || |   ||||||||||||||||||||||||||||||   ||||||||||||||    
T  9073480 gagtaacggactttttcggatttgttaatccggaaacttcaaaaaataagattcgttacatgatgtttccggattacataatccagaaaccccctaaaca 9073579  T
Q  158 ccattttt 165  Q
    || |||||    
T  9073580 cctttttt 9073587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 11698451 - 11698387
Alignment:
Q  77 gattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatc 140  Q
    ||||||||||||||||||||||||||| || | || |||||||||||||||||||||||||||||    
T  11698451 gattttgtaatccggaaacttcaaaaaataagacgtgttacatgatgtttccggattacataatc 11698387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 31519378 - 31519420
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  31519378 tccaaaaatgcccttgaggtttccggatttcataatccggaat 31519420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 31234578 - 31234526
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||||||||| || ||| |||||||||||||||||||||| |||||||||    
T  31234578 cggattacgtaatccgaacaacaccagcaccaattctgaacatatttgtaaca 31234526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 17120055 - 17119956
Alignment:
Q  67 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||| |||||| | ||||||| |||||||||||| | ||||||| ||  |||| ||| ||| ||| |||||||||| ||||| ||||||||||||||    
T  17120055 gattttttcggattatataatccgaaaacttcaaaaaattgggcgcgctatttgattttttcggtttatataatctgaacaccccttaaacaccattttt 17119956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 24627874 - 24627933
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||| ||||||||| |||||||||| | || || ||||||||||||||||||||||||||    
T  24627874 tgcagtccggattaagtaattcggataacatcaacaccaattctgaacatgtttgtaaca 24627933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 41530571 - 41530614
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatg 58  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  41530571 tccaaaaatgcccttgaagtttctggattttataatccggaatg 41530614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 21004294 - 21004336
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  21004294 caaaaatgcccttgaggtttccagatttcataatccggaatgg 21004336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 10833560 - 10833523
Alignment:
Q  195 ggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||| |||||||||||||||||||||||||||||||||    
T  10833560 ggactgcaccagcaccaattctgaacatgtttgtaaca 10833523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 4259778 - 4259712
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||||||||| ||| | |||| ||| ||||||| ||||| |||  ||||||||||||||||||||    
T  4259778 aaaaatagggcgtgttccttgattttttcggattatataatttgagcaccccctaaacaccattttt 4259712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 21004986 - 21004944
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    ||||||||||||||||||||||  | |||||||||||||||||    
T  21004986 tccaaaaatgcccttgaggttttcgaatttcataatccggaat 21004944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 7971254 - 7971218
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatc 51  Q
    |||||||||||||||||||||||  ||||||||||||    
T  7971254 tccaaaaatgcccttgaggtttccagatttcataatc 7971218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 33472059 - 33472151
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttttt 166  Q
    |||||| | ||||||| |||| |||||| |||||||||| ||  |||| ||| ||||||| | ||||| |  |||||||||||||||||||||    
T  33472059 cggattctataatccgaaaacctcaaaaaatagggcgcgctatttgattttttcggattatagaatctaaccaccccctaaacaccatttttt 33472151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 8154871 - 8154983
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8154871 aatgaagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaacccccta 8154970  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  8154971 aacaccctttttt 8154983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 24042375 - 24042264
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| | ||||||||||    
T  24042375 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaataaggcgcgttacatgatgtttccggattacataatccggaaacccccta 24042276  T
Q  154 aacaccattttt 165  Q
    ||||||||||||    
T  24042275 aacaccattttt 24042264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 47202466 - 47202578
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  47202466 aatggagttacggatttttccagattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacccccta 47202565  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  47202566 aacaccctttttt 47202578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 3936084 - 3936191
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  3936084 gagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccaaaaaccccctaaaca 3936183  T
Q  158 ccattttt 165  Q
    || |||||    
T  3936184 cccttttt 3936191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 28230651 - 28230544
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||    
T  28230651 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatccggaaaccccctaaaca 28230552  T
Q  158 ccattttt 165  Q
    || |||||    
T  28230551 cccttttt 28230544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 43737100 - 43737207
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  43737100 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaaccccctaaaca 43737199  T
Q  158 ccattttt 165  Q
    || |||||    
T  43737200 cccttttt 43737207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 36629181 - 36629289
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  36629181 gagtaacggatttttccggattttgtaatctggtaacttaaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccctctaaaca 36629280  T
Q  158 ccatttttt 166  Q
    |||||||||    
T  36629281 ccatttttt 36629289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 42925828 - 42925717
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| | ||||||||||    
T  42925828 aatggagttacgggtttttcctgattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatccggaaacccccta 42925729  T
Q  154 aacaccattttt 165  Q
    |||||| |||||    
T  42925728 aacacctttttt 42925717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 37518473 - 37518371
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 162  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  37518473 acggatttttccggattttataatccagaaacttcaaaaaatagggcgtgttacatgaagtttccggattacataatccggaaaccccctaaacaccatt 37518374  T
Q  163 ttt 165  Q
    |||    
T  37518373 ttt 37518371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 3304946 - 3304835
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttca--aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccct 152  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| | |||||||||| ||||||||||||||||||  |||||||||     
T  3304946 aatggagttacggatttttccggattttgtaatccagaaacttcaaaaaaatagggtgtgttacatgatatttccggattacataatccaaaaacccccc 3304847  T
Q  153 aaacaccatttt 164  Q
    ||||||| ||||    
T  3304846 aaacaccctttt 3304835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 19225771 - 19225674
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||||||||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  19225771 tttttccggattttgtaatccaaaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatccggaaatcccctaaacaccattttt 19225674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 31643013 - 31643125
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||||||||||||||||||| |||| |||||||  |||||||||||||| ||||| | ||||||||||||||||||||||||||||| | |||||||| |    
T  31643013 aatggagttacggatttttctggatcttgtaatttggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacataatccggaaacccccca 31643112  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  31643113 aacaccctttttt 31643125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 161
Target Start/End: Original strand, 36408347 - 36408450
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||||||||||||||||||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||| | ||||| | ||||||    
T  36408347 gagtaacggatttttccggattttgtaatccagaaacttcaaaaaataaggcgcgatacatgatgtttccggattacataatccggaaacctcataaaca 36408446  T
Q  158 ccat 161  Q
    ||||    
T  36408447 ccat 36408450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 36468719 - 36468613
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||| | |||||||||||| | ||||||||||||||    
T  36468719 gagtaacggatttttccggattttgtaatatggaaacttcaaaaaatagggcgtgttacatgatgttt-cagattacataatccggaaaccccctaaaca 36468621  T
Q  158 ccattttt 165  Q
    || |||||    
T  36468620 cccttttt 36468613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 33574221 - 33574125
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccc 150  Q
    |||| ||||| ||||||||  |||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||| |||||||||    
T  33574221 aatgaagttatggatttttttggattttgtaatccggaaactttaaaaaatagggtgcgttacatgatgttttcggattacataatccgaaaacccc 33574125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 31985685 - 31985594
Alignment:
Q  77 gattttgtaatccggaaacttcaaaaa---tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||||||||||| |||| |||||||   |||||||||||||||||| ||| |||||||||||||  ||| ||||| ||||||||||||||    
T  31985685 gattttgtaatccgaaaacctcaaaaaaaatagggcgcgttacatgattttttcggattacataattcgaacaccccttaaacaccattttt 31985594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 7115413 - 7115347
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||||||| ||||||| |||| ||| || |||| |||||||||||||||||||||||||||||||    
T  7115413 aaaaatagggtgcgttacttgattttttcgaattatataatctgaaaaccccctaaacaccattttt 7115347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 42877218 - 42877149
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacata 137  Q
    |||||||||||||||||||| ||||| |  ||||| ||||||||||||||| ||||||||||||||||||    
T  42877218 tttttccggattttgtaatcgggaaaataaaaaaaatagggcgcgttacataatgtttccggattacata 42877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 5731247 - 5731193
Alignment:
Q  178 tccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||| |||||    
T  5731247 tccggattacgtaatcgggacagcaccaacaccaattctgaacatgtttataaca 5731193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 6467671 - 6467780
Alignment:
Q  59 gagttacggatttttccggattttgtaa--tccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaa 155  Q
    |||||||||||||||||| ||| |||||  ||| ||||  ||||||| ||||| | |||||||||| | | |||||||||||||| ||| ||||||||||    
T  6467671 gagttacggatttttccgaattatgtaaaatccagaaatctcaaaaaatagggtgtgttacatgatttgttcggattacataatccgaacaccccctaaa 6467770  T
Q  156 caccattttt 165  Q
    |||| |||||    
T  6467771 cacccttttt 6467780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 9151800 - 9151850
Alignment:
Q  69 tttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacat 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  9151800 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacat 9151850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 47202398 - 47202440
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  47202398 caaaaatgcccttgaggtttccggatttcataatccggaatgg 47202440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 47203154 - 47203112
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  47203154 tccaaaaatgcccttgaggtttccggatttcataatccggaat 47203112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 33151200 - 33151292
Alignment:
Q  77 gattttgtaatccggaaacttcaaaa--atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac-catttttt 166  Q
    ||||||||||| ||||||||| ||||  ||||||||| ||| ||||||| | |||||||||||||| | ||| ||||||||||| ||||||||    
T  33151200 gattttgtaattcggaaacttaaaaaaaatagggcgcattatatgatgtcttcggattacataatccggaaatcccctaaacactcatttttt 33151292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 28349227 - 28349174
Alignment:
Q  68 atttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgat 121  Q
    |||||||||||||||||||| || ||||||||||||||||| | | ||||||||    
T  28349227 atttttccggattttgtaattcgaaaacttcaaaaatagggtgtgctacatgat 28349174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 28346123 - 28346167
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa 103  Q
    ||||||||||| |||||| |||||||||||| |||||||||||||    
T  28346123 gagttacggatgtttccgaattttgtaatccagaaacttcaaaaa 28346167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 31643712 - 31643672
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  31643712 caaaaatgcccttgaggtttccggctttcataatccggaat 31643672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 8155565 - 8155523
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    |||||||||| |||||||||||| |||||||||||||| ||||    
T  8155565 tccaaaaatgtccttgaggtttccggatttcataatccagaat 8155523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 5731036 - 5730987
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgta 229  Q
    |||||||||||||  ||||| |||||||| ||||||| ||||||||||||    
T  5731036 cggattacgtaatcaggacaccaccagcaacaattctaaacatgtttgta 5730987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 26555183 - 26555130
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccct 152  Q
    ||||||||||||||||||||||| |||  ||||||| ||||| ||| |||||||    
T  26555183 aaaaatagggcgcgttacatgatttttttggattacctaatccgaacaccccct 26555130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 8214350 - 8214298
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||||||||||  || ||| || ||||||||||||||||||||| ||||    
T  8214350 cggattacgtaattcaaactgcatcaacaccaattctgaacatgtttgcaaca 8214298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 24042444 - 24042401
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||    
T  24042444 tccaaaaatgcccttga-gtttctgaatttcataattcggaatgg 24042401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 31642951 - 31642987
Alignment:
Q  23 tgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  31642951 tgcccttgaggtttccggatttcataatctggaatgg 31642987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 32035085 - 32035197
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  32035085 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacccccta 32035184  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  32035185 aacaccctttttt 32035197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 33413533 - 33413431
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaa 154  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  33413533 aatggagttacgaatttttctgaattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccagattacataatctggaaaccccctaa 33413434  T
Q  155 aca 157  Q
    |||    
T  33413433 aca 33413431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 17264386 - 17264493
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  17264386 gagtaacggatttttccggattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 17264485  T
Q  158 ccattttt 165  Q
    || |||||    
T  17264486 cccttttt 17264493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 5699530 - 5699641
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| ||||| || |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  5699530 aatggagttacgggttttttcgaattttgtaatccggaaacttgaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacccccta 5699629  T
Q  154 aacaccattttt 165  Q
    |||||| |||||    
T  5699630 aacacccttttt 5699641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 7412804 - 7412910
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  7412804 gagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggattacataatccgaaaa-cccctaaaca 7412902  T
Q  158 ccattttt 165  Q
    || |||||    
T  7412903 cccttttt 7412910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 165
Target Start/End: Complemental strand, 3717455 - 3717359
Alignment:
Q  70 ttttccggattttgtaatccggaaacttcaaaaat-agggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||||    
T  3717455 ttttccgaattttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatctggaaacctcctaaacacaattttt 3717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 14587736 - 14587636
Alignment:
Q  66 ggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttt 164  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  14587736 ggatttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttcctgattacataatccataaaccccctaaacaccatttt 14587637  T
Q  165 t 165  Q
    |    
T  14587636 t 14587636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 23406768 - 23406879
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||  |||||||| |||| |||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||| | ||||||||||    
T  23406768 aatggagttacgagtttttccgaatttcgtaatccggaaacttcaaaaaatagggcgcgttagttgatgtttctggattacataatccggaaacccccta 23406867  T
Q  154 aacaccattttt 165  Q
    ||||||||||||    
T  23406868 aacaccattttt 23406879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 2813413 - 2813300
Alignment:
Q  55 aatggagttacggatttttccggat--tttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccc 151  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||| || || | ||||||||||||||||||||||||||||| | ||||||||    
T  2813413 aatggagttacagatttttccggatattttgtaatccggaaacttcaaaaaataaggtgtgttacatgatgtttccggattacataatccggaaaccccc 2813314  T
Q  152 taaacaccattttt 165  Q
    |||||||| |||||    
T  2813313 taaacacccttttt 2813300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 1945712 - 1945606
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||| |  ||||||||||| |||||||||| | |||||||||     
T  1945712 gagttacggatttttccggattttgtaatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataatctgaaca-cccctaaacc 1945614  T
Q  158 ccattttt 165  Q
    ||||||||    
T  1945613 ccattttt 1945606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 9905100 - 9905197
Alignment:
Q  65 cggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccat 161  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||| ||| |||| |||||||||||||||||| ||| ||||||||||| ||||    
T  9905100 cggatttttccggattttgtaattcggaaatttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccctaaacgccat 9905197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 4508485 - 4508386
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaat-agggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||| |||||| |||| ||||||||| |||||| |||||||||||||||||||||| |||||| | ||| ||||||||||    
T  4508485 gagtaacggatttttccggattttataatccagaaatttcaaaaattagggcgtgttacatgatgtttccggattatataatccggaaatcccctaaaca 4508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 24604545 - 24604438
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||||| ||||||||||| ||||||||||||  |||||||||||| |||||||  ||||||||| | | |||||||||||||| ||| ||||| ||||||    
T  24604545 gagttaaggatttttccgaattttgtaatccaaaaacttcaaaaaatagggcgtcttacatgatttcttcggattacataatccgaacaccccttaaaca 24604446  T
Q  158 ccattttt 165  Q
    ||||||||    
T  24604445 ccattttt 24604438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 5638879 - 5638945
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| |||||    
T  5638879 aaaaatagggcgcgttacatgatgtttccggattacataatttgaaaaatccctaaacacccttttt 5638945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 5638781 - 5638825
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  5638781 tccaaaaatgcccttgaggtttccggatttcataatccggaatgg 5638825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 17501175 - 17501227
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  17501175 cggattacgtaatccggacagcatcaggaccaattctgaacatgtttgtaaca 17501227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 17500967 - 17501017
Alignment:
Q  182 gattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  17500967 gattacgtaatccggacaacaccagcaccaaatctgaacatgtttgtaaca 17501017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 21517623 - 21517557
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||||||||| | ||||| ||||||||||||||||||||  | ||||||| ||||||||||||||    
T  21517623 aaaaatagggcgtgctacataatgtttccggattacataattcggaaaccccttaaacaccattttt 21517557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 29289799 - 29289701
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttc 167  Q
    ||||| |||||||||||||| | || | | ||||||||| | || ||  |||| ||||||||||| |||||||||| ||||| ||||||||||||||||    
T  29289799 ttttttcggattttgtaatctgaaaccctaaaaaataggacacgctatttgatttttccggattatataatctgaacaccccttaaacaccattttttc 29289701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 33413603 - 33413559
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||    
T  33413603 tccaaaaatgcctttgatgtttccggatttcataatccggaatgg 33413559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 2539496 - 2539534
Alignment:
Q  127 cggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  2539496 cggattacataatctggaaaccccctaaacacccttttt 2539534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 32044887 - 32044847
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    ||||||||||||||||||||  ||||||||||||| |||||    
T  32044887 caaaaatgcccttgaggttttcggatttcataatctggaat 32044847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 232
Target Start/End: Original strand, 45244365 - 45244541
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||||| |||||||||||||||||||||| || |||  |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    |||||    
T  45244365 gagttatggatttttccggattttgtaattcgaaaatctcaaaaaatagggcgcgttacatgattttttcggattacataatctgaaaacc----aaaca 45244460  T
Q  158 ccattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    || |||||| |||||      ||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  45244461 ccctttttttcatggtgctgatgcaatctggattacgtaatccggacagcacgagcaccaattctgaacatgtttgtaaca 45244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 64 - 166
Target Start/End: Original strand, 35142055 - 35142158
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaaat-agggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 162  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  35142055 acggatttttccgggttttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatt 35142154  T
Q  163 tttt 166  Q
    ||||    
T  35142155 tttt 35142158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 48303967 - 48304131
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| ||||| | |||||||||| ||| | |||||||||||| ||||||||||| ||||    
T  48303967 gagttacggatttttccggattttgtaatccggaaatctcaaaaaatagggtgtgttacatgattttttcagattacataatccgaaaaccccctcaaca 48304066  T
Q  158 ccattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattct 216  Q
    ||||||||| |||||      |||||||||||||||||||| | |||||||||| ||||||||||    
T  48304067 ccatttttttcatggtggtgatgcaatccggattacgtaatccagacagcaccatcaccaattct 48304131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 47301991 - 47302103
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  47301991 aatggagttatggatttttccggattttgtaatccggaaacttaaaaaaataaggcgcgttacatgatgtttccggattacataatccgaaaacctccta 47302090  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  47302091 aacaccctttttt 47302103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 47740107 - 47740008
Alignment:
Q  67 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  47740107 gatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttt 47740008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 39149791 - 39149892
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattt 163  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||  |||||||||||||||||||| | ||||||||||||||||||||    
T  39149791 acggatttttccggattttgtaatccagaaactcaaaaaatagggcgcgttacatagtgtttccggattacataatccggaaaccccctaaacaccattt 39149890  T
Q  164 tt 165  Q
    ||    
T  39149891 tt 39149892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 50716224 - 50716335
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  50716224 aatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaacccccta 50716323  T
Q  154 aacaccattttt 165  Q
    |||||| |||||    
T  50716324 aacacccttttt 50716335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 50796623 - 50796512
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  50796623 aatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaacccccta 50796524  T
Q  154 aacaccattttt 165  Q
    |||||| |||||    
T  50796523 aacacccttttt 50796512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 46622968 - 46622860
Alignment:
Q  59 gagttacggatttttccggattttgtaat-ccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaac 156  Q
    |||| ||||||||||||||||||| |||  |||||||||||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  46622968 gagtaacggatttttccggattttataaaaccggaaacttcaaaaaataggacacgttacatgatgtttccggattacataatctggaaaccccctaaac 46622869  T
Q  157 accattttt 165  Q
    |||||||||    
T  46622868 accattttt 46622860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 34821514 - 34821419
Alignment:
Q  71 tttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    |||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  34821514 tttccgaattttgtaatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccattttt 34821419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 51258378 - 51258485
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||| || ||| |||||||||||||| ||| ||||||||||||    
T  51258378 gagttacggatttttccggattttgtaatccataaatttcaaaaaatagggcgcgttacataattttttcggattacataatccgaacaccccctaaaca 51258477  T
Q  158 ccattttt 165  Q
    ||||||||    
T  51258478 ccattttt 51258485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 51540797 - 51540690
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| | ||||||| ||||||    
T  51540797 gagtaacggatttttctggattttggaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccgaattacataatccggaaaccccttaaaca 51540698  T
Q  158 ccattttt 165  Q
    || |||||    
T  51540697 ccgttttt 51540690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 2358810 - 2358697
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttca--aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccct 152  Q
    |||||||||||||||||| | ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||| | |||||| |     
T  2358810 aatggagttacggattttcctggattttgtaatccggaaacttcaaaaaaatagggcgtgttacatgatgtttccggcttacataatccggaaaccctcc 2358711  T
Q  153 aaacaccatttttt 166  Q
    ||||||| ||||||    
T  2358710 aaacaccctttttt 2358697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 32025000 - 32025137
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggt------gcaatccggattacgtaat 192  Q
    |||||||||||||  || ||||| ||| ||||||| | |||||||| ||||||||||||||||||||| ||||||      ||| | |||||||||||||    
T  32025000 aaaaatagggcgcactatatgattttttcggattatagaatctgaacaccccctaaacaccatttttttcatggtcctgatgcagttcggattacgtaat 32025099  T
Q  193 tcggacagcaccagcaccaattctgaacatgtttgtaa 230  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  32025100 tcggacaacaccagcaccaattctgaacatgtttgtaa 32025137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 38977926 - 38977824
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 162  Q
    |||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| |||||  ||||||||||||| |||||||||||||||||| ||    
T  38977926 acggatttttctagattttgtaatccggaaacttcaaaaaatagggcgcgttacatggtgttttgggattacataatccgaaaaccccctaaacaccttt 38977827  T
Q  163 ttt 165  Q
    |||    
T  38977826 ttt 38977824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 3902991 - 3902882
Alignment:
Q  57 tggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaa 155  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||  ||||||||||||| | ||||||||||||    
T  3902991 tggagttactggtttttccggattttgtaatccgaaaacttcaaaaaatagagcgcgttacatgatgtttttggattacataatccggaaaccccctaaa 3902892  T
Q  156 caccattttt 165  Q
    |||| |||||    
T  3902891 cacccttttt 3902882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 501328 - 501216
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataat-ctgaaaaccccct 152  Q
    |||||||||| |  |||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  501328 aatggagttatgagtttttccggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattgcataatccggaaaaccccct 501229  T
Q  153 aaacaccattttt 165  Q
    ||||||| |||||    
T  501228 aaacacctttttt 501216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 52777223 - 52777315
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttc 167  Q
    |||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||  | |||||||||||||||| |||||||    
T  52777223 cggattttgtaatccggaaacttcaaaaatagagcactttacatgatgtttccggattacataataaggaaaccccctaaacacccttttttc 52777315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 3937360 - 3937458
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccct 152  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  |||||| ||||    
T  3937360 aatggagttacgagtttttccgaattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataattcgaaaacaccct 3937458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 33438503 - 33438604
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 162  Q
    ||||||||||| | ||||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||| || |||||| | ||||||||||    
T  33438503 acggatttttctgaattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatg-ttccggattacataatgtggaaaccctcaaaacaccatt 33438601  T
Q  163 ttt 165  Q
    |||    
T  33438602 ttt 33438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 3352249 - 3352148
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||| ||||||||  ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||  | ||||||||||||||    
T  3352249 gagtaacgaatttttccaaattttgtaatcaggaaacttaaaaaaatagggtgcgttacatgatgtttccggattacataattcggaaaccccctaaaca 3352150  T
Q  158 cc 159  Q
    ||    
T  3352149 cc 3352148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 28872975 - 28873087
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||| |||||||  |||||| ||||||| ||||||| ||| |||||||| |||| |||||||||| |||||||||||||||||||||  | |||||||||    
T  28872975 aatgaagttacgagtttttctggattttataatccgaaaatttcaaaaaataggacgcgttacattatgtttccggattacataatccaacaacccccta 28873074  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  28873075 aacaccctttttt 28873087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 34821579 - 34821509
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccg 128  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  34821579 gagtaacggaattttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacctgatgtttccg 34821509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 8735278 - 8735337
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  8735278 tgcaatccagattacgaaattcggacagcaccagcaccaattctgaacatgtttataaca 8735337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 9087519 - 9087578
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  9087519 tgcaatccagattacgaaattcggacagcaccagcaccaattctgaacatgtttataaca 9087578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 43473111 - 43473044
Alignment:
Q  99 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttttt 166  Q
    ||||||| || || |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  43473111 aaaaatatggtgcattacatgatgtttccggattacataatccggaaaccccctaaacaccatttttt 43473044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 49096409 - 49096311
Alignment:
Q  60 agttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||| |||  |||||||||| ||| || |||||||||||  || ||||||||||||    
T  49096409 agttacggatttttccggattttgtaatccggaaatctcaaaaaatatggcatgttacatgattttttcgaattacataatccaaacaccccctaaaca 49096311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 30721974 - 30721881
Alignment:
Q  77 gattttgtaatccggaaacttca-aaaatagggcgc---gttacatgatgtttccggattacataatctgaaaac-cccctaaacaccattttt 165  Q
    |||||||||||||| |||||||| ||||||||||||    ||||||||| ||| |||||||||||||| ||| || ||||||||||||||||||    
T  30721974 gattttgtaatccgaaaacttcaaaaaatagggcgcaatattacatgattttttcggattacataatccgaacactcccctaaacaccattttt 30721881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 45244691 - 45244750
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||||||||||||||| ||||||  |||| |||||||||||||||||||| |||||    
T  45244691 tgcaatccggattacgtaatccggacaataccatcaccaattctgaacatgtttataaca 45244750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 2358105 - 2358147
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  2358105 tccaaaaatgcccttgaggtttccggatttcataatccggaat 2358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 3938854 - 3938812
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  3938854 tccaaaaatgcccttgaggtttccggatttcataatccggaat 3938812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 33700659 - 33700703
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  33700659 tccaaaaatgtccttgaagtttctggatttcataatccggaatgg 33700703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 48303895 - 48303937
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  48303895 caaaaatgcccttgaggtttccagatttcataatccggaatgg 48303937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 47123082 - 47123135
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgc 111  Q
    |||| |||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  47123082 gagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47123135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 47130448 - 47130501
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgc 111  Q
    |||| |||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  47130448 gagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 8657790 - 8657750
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  8657790 caaaaatgtccttgaggtttccggatttcataatccggaat 8657750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 51258307 - 51258347
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  51258307 caaaaatgtccttgaagtttctggatttcataatccggaat 51258347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 2358879 - 2358836
Alignment:
Q  17 caaaaatgcccttgaggtttct-ggatttcataatccggaatgg 59  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  2358879 caaaaatgcccttgaggtttcccggatttcataatccggaatgg 2358836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 8735493 - 8735544
Alignment:
Q  181 ggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||||||| |||||| || || |||||||| |||||||||||||||||    
T  8735493 ggattacgtaatccggacaacatcaacaccaattatgaacatgtttgtaaca 8735544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 9087734 - 9087785
Alignment:
Q  181 ggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||||||| |||||| || || |||||||| |||||||||||||||||    
T  9087734 ggattacgtaatccggacaacatcaacaccaattatgaacatgtttgtaaca 9087785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 42936685 - 42936720
Alignment:
Q  68 atttttccggattttgtaatccggaaacttcaaaaa 103  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42936685 atttttccggattttgtaatccgaaaacttcaaaaa 42936720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 3937292 - 3937334
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||    
T  3937292 caaaaatgcccttgaggtttccggattttataatccagaatgg 3937334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 43473204 - 43473162
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||| |||||||||||| | |||||||||||||||||||    
T  43473204 caaaaatgtccttgaggtttccgaatttcataatccggaatgg 43473162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 52777145 - 52777187
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||||||||  ||||||||||||| |||||||    
T  52777145 caaaaatgcccttgaggttttcggatttcataatctggaatgg 52777187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 33701497 - 33701457
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttca 99  Q
    |||||||| |||||||||||||  |||||||||||||||||    
T  33701497 gagttacgaatttttccggattacgtaatccggaaacttca 33701457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 42936575 - 42936615
Alignment:
Q  19 aaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||| ||||||| ||||| |||||||||||||||||||||    
T  42936575 aaaatacccttgaagtttccggatttcataatccggaatgg 42936615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 42937088 - 42937052
Alignment:
Q  68 atttttccggattttgtaatccggaaacttcaaaaat 104  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  42937088 attttttcggattttgtaatccggaaacatcaaaaat 42937052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 23523886 - 23523998
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||   ||||||||||    
T  23523886 aatggagttacggattttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccagaaacccccta 23523985  T
Q  154 aacaccatttttt 166  Q
    |||||| ||||||    
T  23523986 aacaccctttttt 23523998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 48319247 - 48319139
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  48319247 gagtgacggatttttccggattt-gtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatccgaaaaccccctaaaca 48319149  T
Q  158 ccattttttc 167  Q
    || |||||||    
T  48319148 cctttttttc 48319139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 17933315 - 17933212
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 162  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||    
T  17933315 acggatttttccagattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccccttaaacaccctt 17933216  T
Q  163 tttt 166  Q
    ||||    
T  17933215 tttt 17933212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 25539135 - 25539024
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||| | ||||||||||    
T  25539135 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttctggattacataatccggaaacccccta 25539036  T
Q  154 aacaccattttt 165  Q
    ||||| ||||||    
T  25539035 aacactattttt 25539024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 40703648 - 40703755
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  40703648 gagtaacggatttttccggattttgtaatccggaaatttcaaaaaatagggtgcattacatgatgtttccggattacataacctgaaaaccccctaaaca 40703747  T
Q  158 ccattttt 165  Q
    || |||||    
T  40703748 cccttttt 40703755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 54631646 - 54631537
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  54631646 gagtaacgggtttttccggattttgtaatccggaaacttcaaaaagtatggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 54631547  T
Q  158 ccattttttc 167  Q
    |  |||||||    
T  54631546 catttttttc 54631537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 19835504 - 19835611
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  19835504 gagtaacgggtttttccggattttgtaatccggaaactttgaaaaatagggtgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 19835603  T
Q  158 ccattttt 165  Q
    || |||||    
T  19835604 cccttttt 19835611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 38536150 - 38536261
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  38536150 aatgaagttacgggtttttccggattttgtaattcggaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaacccccta 38536249  T
Q  154 aacaccattttt 165  Q
    |||||| |||||    
T  38536250 aacacctttttt 38536261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 55052806 - 55052695
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||||| | ||||||||||    
T  55052806 aatggagttacgggtttttccggattatgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattatataatccggaaacccccta 55052707  T
Q  154 aacaccattttt 165  Q
    |||||| |||||    
T  55052706 aacacccttttt 55052695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 7931642 - 7931743
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  7931642 gagtaacgggtttttccggattttgcaatccggaaacttcaaaaaatagggcgcgttacattatgtttccggattacataatccggaaaccccctaaaca 7931741  T
Q  158 cc 159  Q
    ||    
T  7931742 cc 7931743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 25491568 - 25491471
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  25491568 ttttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacacctttttt 25491471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 29822599 - 29822704
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| |||||||||||||| | ||||||| ||    
T  29822599 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatacagcgcgttacatgatgttttcggattacataatccggaaaccccata 29822698  T
Q  154 aacacc 159  Q
    ||||||    
T  29822699 aacacc 29822704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 25752620 - 25752520
Alignment:
Q  66 ggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttt 164  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||| ||||    
T  25752620 ggatttttccggattttgtaatccggaaatttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccataaacaccctttt 25752521  T
Q  165 t 165  Q
    |    
T  25752520 t 25752520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 32441791 - 32441887
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccc 150  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  32441791 aatggagttaaggatttttctggattttgtaatccggaaacttcaaaaaatagcgcgcgttacatgatgtttccggattacataatccggaaacccc 32441887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 49396988 - 49397100
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 153  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||| |||||||  ||||||||||||| ||||| ||| ||    
T  49396988 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaaataggatgcgttacaagatgtttttggattacataatccgaaaatccctta 49397087  T
Q  154 aacaccatttttt 166  Q
    |||| ||||||||    
T  49397088 aacatcatttttt 49397100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 165
Target Start/End: Original strand, 8106387 - 8106483
Alignment:
Q  70 ttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| |||||||| |||||| ||||||||||| ||| ||||||||||||||||||||    
T  8106387 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccattttt 8106483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 34972864 - 34972956
Alignment:
Q  75 cggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttttt 166  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  34972864 cggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggactacataatccgaaaaccccctaaacaccatttttt 34972956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 3703433 - 3703326
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| |||| || |||||||||| ||| |||||||||||||  ||| ||||||||||||    
T  3703433 gagttacggattttttcggattttgtaatccgaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaacaccccctaaaca 3703334  T
Q  158 ccattttt 165  Q
    ||||||||    
T  3703333 ccattttt 3703326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 6228998 - 6228919
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggatta 133  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  6228998 aatggagctacggatttttccggattttgtaacccggaaacttcaaaaaatagggcgcgttacatgatgtttccggatta 6228919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 46440452 - 46440350
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 162  Q
    |||| |||||||| ||||| |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| | |||||||||||||||| ||    
T  46440452 acgggtttttccgaattttataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctt 46440353  T
Q  163 ttt 165  Q
    |||    
T  46440352 ttt 46440350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 6003860 - 6003748
Alignment:
Q  55 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaata---gggcgcgttacatgatgtttccggattacataatctgaaaaccccc 151  Q
    ||||||||||||||||||| || ||||| |||||||||||||| ||||| |   | | ||||||||||||||||||||||||||||||| | ||||||||    
T  6003860 aatggagttacggattttttcgaattttataatccggaaacttaaaaaaaataagagtgcgttacatgatgtttccggattacataatccggaaaccccc 6003761  T
Q  152 taaacaccatttt 164  Q
    |||||||| ||||    
T  6003760 taaacaccttttt 6003748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 2506215 - 2506107
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaat--agggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaac 156  Q
    |||| ||||||||||||  ||||||| || | ||||| |||||||   |||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  2506215 gagtaacggatttttccaaattttgtgattcagaaacatcaaaaaataagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaac 2506116  T
Q  157 accattttt 165  Q
    ||| |||||    
T  2506115 acccttttt 2506107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 38416549 - 38416649
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    ||||| ||||||||| |  |||||||||||||||||| | |||| ||||||| ||||||||||| ||| |||||||||||||| ||| ||||||||||||    
T  38416549 gagttgcggattttttcaaattttgtaatccggaaacataaaaaaatagggcacgttacatgattttttcggattacataatccgaacaccccctaaaca 38416648  T
Q  158 c 158  Q
    |    
T  38416649 c 38416649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 41413252 - 41413183
Alignment:
Q  89 cggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac 158  Q
    |||||||||||||||   || ||||||||||||||||||||||||||||||| | |||||||||||||||    
T  41413252 cggaaacttcaaaaaataggagcgttacatgatgtttccggattacataatccggaaaccccctaaacac 41413183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 50392592 - 50392529
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgat 121  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||    
T  50392592 gagttacggatttttccggattttgtaatccggaaatctcaaaaaatggggcgcgttacatgat 50392529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 53894169 - 53894108
Alignment:
Q  64 acggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtt 124  Q
    |||| ||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  53894169 acgggtttttccggattttgcaatcaggaaacttcaaaaaatagggcgcgttacatgatgtt 53894108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 25140775 - 25140723
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  25140775 cggattacgtaatccgaacagcatcagcaccaattctgaacatgtttgtaaca 25140723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 31582560 - 31582498
Alignment:
Q  103 atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||| ||||||||||||| | |||||||||||| | |||||||||||||||| |||||    
T  31582560 atagggcgcattacatgatgttttctgattacataatccggaaaccccctaaacacccttttt 31582498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 34972786 - 34972828
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  34972786 caaaaatgcccttgaggtttccggatttcataatccggaatgg 34972828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 34973536 - 34973494
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  34973536 tccaaaaatgcccttgaggtttctgggtttcataatccggaat 34973494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 7817486 - 7817367
Alignment:
Q  118 tgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggtgcaa------tccggattacgtaattcggacagcaccagcacca 211  Q
    |||| ||| ||||||| | |||||||| |||| ||||||||||||||||| |||||||        ||| |||||||||||  ||||||||||| |||||    
T  7817486 tgattttttcggattaaagaatctgaacaccctctaaacaccattttttc-atggtgctggtgatgtccagattacgtaatctggacagcaccaacacca 7817388  T
Q  212 attctgaacatgtttgtaaca 232  Q
    ||||||||||||||| |||||    
T  7817387 attctgaacatgtttataaca 7817367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 25140566 - 25140514
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||||||||||| | |||| || ||||||||||||||||||||||||||    
T  25140566 cggattacgtaattcgaatagcatcaacaccaattctgaacatgtttgtaaca 25140514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 6003928 - 6003886
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  6003928 caaaaatatccttgaggtttctggatttcataatccggaatgg 6003886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 6229066 - 6229024
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  6229066 caaaaatgtccttgaggtttcaggatttcataatccggaatgg 6229024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 7794312 - 7794211
Alignment:
Q  137 aatctgaaaaccccctaaacaccattttttccatggtgcaa------tccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaa 230  Q
    |||||||| |||| |||||||||||||||| ||||||||        ||| |||||||||||||||||| ||||| |||||||| ||||||| ||| |||    
T  7794312 aatctgaacaccctctaaacaccatttttttcatggtgctggtgctgtccagattacgtaattcggacaacaccaacaccaattttgaacatatttataa 7794213  T
Q  231 ca 232  Q
    ||    
T  7794212 ca 7794211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 27631859 - 27631901
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  27631859 tccaaaaatgcccttgaggtttccagatttcataatccggaat 27631901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 32441723 - 32441765
Alignment:
Q  17 caaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  32441723 caaaaatacccttgaggtttccggatttcataatccggaatgg 32441765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 42660435 - 42660385
Alignment:
Q  180 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaa 230  Q
    ||||||| ||||| |||| |||||||||||||||||||| |||||||||||    
T  42660435 cggattatgtaatccggatagcaccagcaccaattctgagcatgtttgtaa 42660385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 6228307 - 6228344
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatcc 52  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  6228307 tccaaaaatgcccttgaggtttccggatttcataatcc 6228344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 55052875 - 55052832
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 59  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  55052875 tccaaaaatgcccttgag-tttccggatttcataatccggaatgg 55052832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 50392496 - 50392453
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattct 216  Q
    |||||||||||||||||||| | |||||||||| ||||||||||    
T  50392496 tgcaatccggattacgtaatccagacagcaccatcaccaattct 50392453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 3703507 - 3703469
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccg 53  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  3703507 tccaaaaatgcccttgaagtttccggatttcataatccg 3703469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 23524460 - 23524418
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatccggaat 57  Q
    |||||||||||||||||||||||  ||||| ||||||||||||    
T  23524460 tccaaaaatgcccttgaggtttccagattttataatccggaat 23524418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 41412706 - 41412742
Alignment:
Q  15 tccaaaaatgcccttgaggtttctggatttcataatc 51  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  41412706 tccaaaaatgctcttgaggtttttggatttcataatc 41412742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 9680 - 9573
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  9680 gagttacgggtttttccgaattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccgaaaaccccctgaaca 9581  T
Q  158 ccattttt 165  Q
    || |||||    
T  9580 cccttttt 9573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 142138 - 142039
Alignment:
Q  67 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  142138 gatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttt 142039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 23098 - 23205
Alignment:
Q  59 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 157  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||| | ||||||||||||||    
T  23098 gagtaacggatttttccgaattttataatccggaaacttcaaaaaatagggtgcattacatgatgtttccggattatataatccggaaaccccctaaaca 23197  T
Q  158 ccattttt 165  Q
    || |||||    
T  23198 cctttttt 23205  T

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Target: scaffold0508 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 3568 - 3471
Alignment:
Q  69 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 165  Q
    ||||| || |||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  3568 ttttttcgaattttgtaatctagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacacccttttt 3471  T

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Target: scaffold0016 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 205873 - 205814
Alignment:
Q  173 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 232  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  205873 tgcaatccggattacgtaatccagacatcaccagcaccaattctgaacatgtttgtaaca 205814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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