View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_high_23 (Length: 300)
Name: NF11453A_high_23
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_high_23 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 6 - 273
Target Start/End: Original strand, 30888410 - 30888677
Alignment:
| Q |
6 |
aaaatttgcacattttaatcgaaaggtgttctaattaagcatggtattggatttggaacacagtgatgcagagctaactaatagttctaagtgttttgtt |
105 |
Q |
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| T |
30888410 |
aaaatttgcacattttaatcgaaaggtgttctaattaagcatggtattggatttggaacacagtgatgcagagctaactaatagttctaagtgttttgtt |
30888509 |
T |
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| Q |
106 |
tgagaacatatatacaagtaatctaaagtatgttcttggtttggttaatttttctatgttattaaccaagaacaatcatgagggaaattgttatgattgc |
205 |
Q |
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| T |
30888510 |
tgagaacatatatacaagtaatctaaagtatgttcttggtttggttaatttttctatgttattagccaagaacaatcatgagggaaattgttatgattgc |
30888609 |
T |
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| Q |
206 |
aactgctgctacacttgggaatttgttggtgggatgggatagttcaaccattgcaggtgtgtgtgcgc |
273 |
Q |
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| T |
30888610 |
aactgctgctacacttgggaatttgttggtgggatgggatagttcaaccattgcaggtgtgtgtgcgc |
30888677 |
T |
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