View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_138 (Length: 353)
Name: NF11453A_low_138
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_138 |
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Alignment Details
Target: chr8 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 6 - 352
Target Start/End: Complemental strand, 23496021 - 23495675
Alignment:
| Q |
6 |
attaccaacatgttctttgcaatattgaatgatattttggacctttagatagaatgagatggtgaaatacatgaccatgctgaaatgaatcattatttga |
105 |
Q |
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| T |
23496021 |
attaccaacatgttctttgcaatattgaatgatattttggacctttagatagaatgagatggtgaaatacatgaccatgctgaaatgaatcagtatttga |
23495922 |
T |
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| Q |
106 |
tataggacttgtttattatcacatgtctgcttgagcatcttcattggtgaaaagggaggttattacatgtctacatctacatcaaatgtaatattattgg |
205 |
Q |
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| T |
23495921 |
tataggacttgtttattattacatgtctgcttaagcatcttcattggtgaaaagggaggttattacatgtctacatctacatcaaatgtaatattattgg |
23495822 |
T |
|
| Q |
206 |
ctctgatgagtgagnnnnnnntgcaaagaacaaaactctcgtatcgttctcacggctagaatccatgttaacataatccaattgtataactcaggaataa |
305 |
Q |
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| T |
23495821 |
ctctgatgagtgaaaaaaaaatgcaaagaacaaaactctcgtatcgttctcacggctagaatccatgttaacatgctccaattgtataactcaggaataa |
23495722 |
T |
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| Q |
306 |
tcgattcttaaatctaagaactcacttaagaatattcttggacatgc |
352 |
Q |
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|||||||||||||||||||||||||||||||||| | ||||| |||| |
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| T |
23495721 |
tcgattcttaaatctaagaactcacttaagaatactgttggagatgc |
23495675 |
T |
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