View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_216 (Length: 302)
Name: NF11453A_low_216
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_216 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 21 - 289
Target Start/End: Original strand, 23853152 - 23853420
Alignment:
| Q |
21 |
ctatccatatttaagggaagagactgaagcagagctgcaagtcgggtgggcacaacacaaccgtgacacaaccaacacaacttaaataggcatctcattt |
120 |
Q |
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| T |
23853152 |
ctatccatatttaagggaagagactgaagcagagctgcaagtcgggtgggcacaacacaaccgtgacacaaccaacacaacttaaataggcatctcattt |
23853251 |
T |
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| Q |
121 |
tattatgtcctttcatttgttcatttttatatttggaacgagtcatgttgatgttctatttccgtgcatatcttgagcacttatttatatttggggacac |
220 |
Q |
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| T |
23853252 |
tattatgtcctttcatttgttcatttttatatttggaacgagtcatgttgatgttctatttccgtgcatatcttgagcacttatttatatttggggacac |
23853351 |
T |
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| Q |
221 |
cttatattcaaacacaattgagtctctatgtaattgaactctagttaattggtatctatgttgatgtcc |
289 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23853352 |
cttatattcaaacacaattgagtctctatgtaattgaactctagttaattggtatctatgttgatgtcc |
23853420 |
T |
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