View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_256 (Length: 286)
Name: NF11453A_low_256
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_256 |
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Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 7 - 258
Target Start/End: Complemental strand, 46521057 - 46520806
Alignment:
| Q |
7 |
acaacagtgtaggtgctttgctttctgcgatttgataaaacgtatgtgaaagacaagtgctttactagcctttaagagaaaggagcttcaaaagatgaat |
106 |
Q |
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| T |
46521057 |
acaacaatgtaggtgctttgctttctgcgatttgataaaacgtatgtgaaagacaagtgctttactagcctttaagagaaaggagcttcaaaagatgaat |
46520958 |
T |
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| Q |
107 |
gagttaattaagatgacaaatgctaatgaaaactcggtgagagcttttatcttttgggaaatataaatcgaaacttgaagacaggtttcaatgttaagtg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46520957 |
gagttaattaagatgacaaatgctaatgaaaactcggtgagagcttttatcttttgggaaatataaatcgaaacttgaagacaggtttcaatgttaagtg |
46520858 |
T |
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| Q |
207 |
aatnnnnnnnnnnnngcagttttttgccctcttataatattttaccaaaact |
258 |
Q |
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||| ||||||||||||||||||||||||||||||||||||| |
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| T |
46520857 |
aataaaaaacaaaaagcagttttttgccctcttataatattttaccaaaact |
46520806 |
T |
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