View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_278 (Length: 277)
Name: NF11453A_low_278
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_278 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 36153872 - 36154148
Alignment:
| Q |
1 |
agcaaatgatatgatttaagatgtgaatcatgttatgccaataatataatgatgcacaccaagtatataagtgctgtcaaattaacacttgggaatcatg |
100 |
Q |
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| T |
36153872 |
agcaattgatatgatttaagatgtgaatcatgttatgccaataatataatgatgcacactaagtatataagtgctgtcaaattaacacttgggaatcatg |
36153971 |
T |
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| Q |
101 |
tgtaggtccactctgtataactaactgttaaatggtcacgagtctctctaaatgagtcaccataatattgaatggtgtagttaaatgtttgaatcaacat |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36153972 |
tgtaggtccactctgtataactaacttttaaatggtcacgagtctctctaaatgagtcaccataatattgaatggtgtagttaaatgtttgaatcaacat |
36154071 |
T |
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| Q |
201 |
tttaaactattcaaaaaacattatattatattaattgataatcttatctcaatggcacgggtggctcatgaagcctg |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
36154072 |
tttaaactattcaaaaaacattatattatattaattgataatcttacctcaatggcacgggtggctcatgaagcctg |
36154148 |
T |
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