View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11453A_low_287 (Length: 275)

Name: NF11453A_low_287
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11453A_low_287
NF11453A_low_287
[»] chr7 (16 HSPs)
chr7 (7-202)||(32919006-32919201)
chr7 (156-202)||(19426579-19426625)
chr7 (154-191)||(41227064-41227101)
chr7 (157-189)||(34654567-34654599)
chr7 (155-202)||(24700119-24700166)
chr7 (157-191)||(41080126-41080160)
chr7 (153-191)||(41985126-41985164)
chr7 (156-198)||(49128722-49128764)
chr7 (154-191)||(4971287-4971324)
chr7 (157-202)||(20406541-20406586)
chr7 (154-191)||(37856191-37856228)
chr7 (153-202)||(41966328-41966377)
chr7 (157-202)||(42663084-42663129)
chr7 (154-191)||(47530328-47530365)
chr7 (157-201)||(3247069-3247113)
chr7 (158-190)||(38218378-38218410)
[»] chr4 (27 HSPs)
chr4 (7-112)||(39599626-39599723)
chr4 (154-201)||(9162063-9162110)
chr4 (156-202)||(10994178-10994224)
chr4 (154-191)||(8026790-8026827)
chr4 (157-202)||(18568841-18568886)
chr4 (157-201)||(169529-169573)
chr4 (154-202)||(4896526-4896574)
chr4 (155-202)||(23094374-23094421)
chr4 (157-200)||(39010165-39010208)
chr4 (155-202)||(51296215-51296262)
chr4 (156-202)||(47998593-47998639)
chr4 (158-195)||(515657-515694)
chr4 (160-201)||(925089-925130)
chr4 (157-202)||(11064115-11064160)
chr4 (157-202)||(13252537-13252582)
chr4 (157-202)||(22071496-22071541)
chr4 (156-201)||(34116567-34116612)
chr4 (155-196)||(38864768-38864809)
chr4 (157-202)||(39881056-39881101)
chr4 (154-191)||(41262655-41262692)
chr4 (154-183)||(52697480-52697509)
chr4 (155-191)||(3222987-3223023)
chr4 (154-190)||(24235317-24235353)
chr4 (155-191)||(31221411-31221447)
chr4 (155-191)||(40590610-40590646)
chr4 (155-191)||(44368239-44368275)
chr4 (155-191)||(54036555-54036591)
[»] chr6 (20 HSPs)
chr6 (155-202)||(15722529-15722576)
chr6 (155-191)||(30945821-30945857)
chr6 (156-202)||(30714679-30714725)
chr6 (154-202)||(28965866-28965914)
chr6 (155-202)||(11785353-11785400)
chr6 (156-191)||(31417333-31417368)
chr6 (156-202)||(9954547-9954593)
chr6 (156-202)||(30906689-30906735)
chr6 (157-202)||(29376741-29376786)
chr6 (157-202)||(32784738-32784783)
chr6 (158-190)||(1246397-1246429)
chr6 (153-201)||(3088969-3089017)
chr6 (155-191)||(3180029-3180065)
chr6 (155-191)||(3339536-3339572)
chr6 (154-202)||(12044329-12044377)
chr6 (154-202)||(15666799-15666847)
chr6 (154-202)||(19789102-19789150)
chr6 (154-202)||(29383554-29383602)
chr6 (157-201)||(32457279-32457323)
chr6 (154-202)||(34413089-34413137)
[»] chr2 (25 HSPs)
chr2 (42-96)||(29314303-29314357)
chr2 (155-202)||(18373845-18373892)
chr2 (155-202)||(31296871-31296918)
chr2 (157-202)||(30974015-30974060)
chr2 (154-202)||(33296097-33296145)
chr2 (159-191)||(33417242-33417274)
chr2 (155-202)||(4738598-4738645)
chr2 (156-191)||(22353201-22353236)
chr2 (156-202)||(2308348-2308394)
chr2 (155-201)||(10749706-10749752)
chr2 (156-202)||(36909869-36909915)
chr2 (157-202)||(5455479-5455524)
chr2 (154-191)||(19529539-19529576)
chr2 (154-191)||(29795444-29795481)
chr2 (157-202)||(39247489-39247534)
chr2 (157-193)||(4344449-4344485)
chr2 (154-194)||(6215267-6215307)
chr2 (157-201)||(21805813-21805857)
chr2 (155-191)||(27307268-27307304)
chr2 (154-202)||(30413752-30413800)
chr2 (154-190)||(35171264-35171300)
chr2 (154-190)||(42607557-42607593)
chr2 (154-202)||(42665838-42665886)
chr2 (154-190)||(44085271-44085307)
chr2 (158-190)||(44105129-44105161)
[»] chr3 (22 HSPs)
chr3 (155-202)||(35272025-35272072)
chr3 (158-202)||(31206877-31206921)
chr3 (155-202)||(7240-7287)
chr3 (155-202)||(43333696-43333743)
chr3 (155-201)||(18169155-18169201)
chr3 (154-196)||(35074122-35074164)
chr3 (156-202)||(41877637-41877683)
chr3 (154-196)||(43169774-43169816)
chr3 (155-201)||(49196694-49196740)
chr3 (157-202)||(462427-462472)
chr3 (154-191)||(1765401-1765438)
chr3 (157-202)||(19418183-19418228)
chr3 (155-196)||(32575424-32575465)
chr3 (154-191)||(48405407-48405444)
chr3 (157-202)||(51464298-51464343)
chr3 (154-202)||(108428-108476)
chr3 (155-191)||(8254025-8254061)
chr3 (154-202)||(11335328-11335376)
chr3 (157-201)||(31017421-31017465)
chr3 (154-190)||(33256306-33256342)
chr3 (155-191)||(52454131-52454167)
chr3 (154-190)||(52564672-52564708)
[»] chr8 (28 HSPs)
chr8 (156-202)||(6161947-6161993)
chr8 (157-202)||(6849287-6849332)
chr8 (156-201)||(36064029-36064074)
chr8 (154-202)||(39021469-39021517)
chr8 (155-195)||(44380647-44380687)
chr8 (155-202)||(21418618-21418665)
chr8 (155-202)||(40719669-40719716)
chr8 (155-202)||(45101394-45101441)
chr8 (155-201)||(26294187-26294233)
chr8 (155-201)||(26307444-26307490)
chr8 (155-201)||(34473947-34473993)
chr8 (156-202)||(34970206-34970252)
chr8 (156-202)||(42443103-42443149)
chr8 (158-191)||(6806909-6806942)
chr8 (157-202)||(13884186-13884231)
chr8 (157-202)||(26871046-26871091)
chr8 (153-198)||(39719278-39719323)
chr8 (157-202)||(41344695-41344740)
chr8 (157-202)||(43873717-43873762)
chr8 (157-201)||(7596918-7596962)
chr8 (154-202)||(11223885-11223933)
chr8 (155-191)||(14710919-14710955)
chr8 (157-201)||(21273737-21273781)
chr8 (154-202)||(22852865-22852913)
chr8 (154-202)||(36497658-36497706)
chr8 (155-191)||(40413375-40413411)
chr8 (154-202)||(40842011-40842059)
chr8 (156-196)||(44086545-44086585)
[»] chr5 (14 HSPs)
chr5 (156-202)||(8897381-8897427)
chr5 (155-187)||(7927353-7927385)
chr5 (155-202)||(14914370-14914417)
chr5 (155-202)||(38500941-38500988)
chr5 (156-202)||(3771032-3771078)
chr5 (157-191)||(27440479-27440513)
chr5 (157-191)||(41460116-41460150)
chr5 (157-202)||(12718406-12718451)
chr5 (157-202)||(12779632-12779677)
chr5 (157-202)||(34381012-34381057)
chr5 (157-202)||(39595272-39595317)
chr5 (157-198)||(42699057-42699098)
chr5 (154-202)||(26660437-26660485)
chr5 (154-202)||(26932029-26932077)
[»] chr1 (22 HSPs)
chr1 (156-202)||(30530600-30530646)
chr1 (154-202)||(50226905-50226953)
chr1 (155-191)||(50797789-50797825)
chr1 (158-202)||(52714979-52715023)
chr1 (155-202)||(11812385-11812432)
chr1 (157-196)||(16836136-16836175)
chr1 (158-201)||(18959005-18959048)
chr1 (155-202)||(40610227-40610274)
chr1 (157-191)||(34974786-34974820)
chr1 (156-202)||(39669805-39669851)
chr1 (155-201)||(44672057-44672103)
chr1 (154-183)||(21446252-21446281)
chr1 (155-196)||(25302675-25302716)
chr1 (154-191)||(27687545-27687582)
chr1 (158-191)||(51037978-51038011)
chr1 (155-191)||(9011643-9011679)
chr1 (158-202)||(9882685-9882729)
chr1 (156-184)||(13078842-13078870)
chr1 (155-191)||(40596080-40596116)
chr1 (155-191)||(40612112-40612148)
chr1 (155-191)||(42256458-42256494)
chr1 (157-201)||(50528084-50528128)
[»] scaffold0011 (1 HSPs)
scaffold0011 (155-202)||(219690-219737)


Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 32919201 - 32919006
Alignment:
Q  7 agcaaaacttcattgggtgcgtagatatagttttttatccatcgacattagcactgtattcgtccacaaactggtaaacatcctttcccttttgtttcca 106  Q
    ||||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32919201 agcaaaacttctttgggtgcgtagatatagggttgtatccatcgacattagcactgtattcgtccacaaactggtaaacatcctttcccttttgtttcca 32919102  T
Q  107 taaggtttgccagtcttaaaagagaatgatgtcttctaaccaagctctaagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  32919101 taaggtttgccagtcttaaaagagaatgatgtcttctaacgaagctctaagagaaatgatatttatacaatcattttgtgacaattttttgacaac 32919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 19426579 - 19426625
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  19426579 agagaaatgatatttgtacaaccattttgtgacaactttttgacaac 19426625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 41227064 - 41227101
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||||||||||| |||||||||||||    
T  41227064 taagagaaatgatatttatacaattattttgtgacaac 41227101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 189
Target Start/End: Original strand, 34654567 - 34654599
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgaca 189  Q
    |||||||||||||||||||||||||||||||||    
T  34654567 gagaaatgatatttatacaatcattttgtgaca 34654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 24700119 - 24700166
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| |||||||||||||| ||||| |||| |||||    
T  24700119 aagagaaatgatatttgtacaatcattttgtaacaacttttttacaac 24700166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 41080126 - 41080160
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||| ||||||||||||||||||||    
T  41080126 gagaaatgatatttgtacaatcattttgtgacaac 41080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 41985164 - 41985126
Alignment:
Q  153 ctaagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  41985164 ctaagagaaatgatatttgtacaatcaatttgtgacaac 41985126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 49128722 - 49128764
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttga 198  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||    
T  49128722 agagaaatgatatttatacaaccattttgtaacaactttttga 49128764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 4971287 - 4971324
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  4971287 taagagaaatgatatttgtacaaccattttgtgacaac 4971324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 20406541 - 20406586
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| ||| |||||||||| ||||||||||    
T  20406541 gagaaatgatatttgtacaaccatcttgtgacaactttttgacaac 20406586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 37856228 - 37856191
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  37856228 taagagaaatgatatttgtacaaccattttgtgacaac 37856191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 41966328 - 41966377
Alignment:
Q  153 ctaagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||||| ||||| || ||||||||||  ||||||||||    
T  41966328 ctaagagaaatgatatttgtacaaccactttgtgacaattttttgacaac 41966377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 42663084 - 42663129
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||  |||||||||||||| ||||||||||    
T  42663084 gagaaatgatatttgtacatccattttgtgacaactttttgacaac 42663129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 47530365 - 47530328
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  47530365 taagagaaatgatatttatacaaccattttatgacaac 47530328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 3247069 - 3247113
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||| ||||||||||| |||||||  |||||||||    
T  3247069 gagaaatgatatttgtacaatcatttagtgacaattttttgacaa 3247113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 38218410 - 38218378
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaa 190  Q
    ||||||||||||| |||||||||||||||||||    
T  38218410 agaaatgatatttgtacaatcattttgtgacaa 38218378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 39599626 - 39599723
Alignment:
Q  7 agcaaaacttcattgggtgcgtagatatagttttttatccatcgacattagcactgtattcgtccacaaactggtaaacatcctttcccttttgtttcca 106  Q
    ||||||||||| ||||||||||||||||||   | ||||||||| ||||||||||||||||||||||        ||||||| |||||||||||||||||    
T  39599626 agcaaaacttctttgggtgcgtagatatagggctgtatccatcggcattagcactgtattcgtccac--------aaacatcatttcccttttgtttcca 39599717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 9162063 - 9162110
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  9162063 taagagaaatgatatttgtacaatcattttgtgacaactttttgacaa 9162110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 10994224 - 10994178
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  10994224 agagaaatgatatttgtacaaccattttgtgacaatcttttgacaac 10994178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 8026827 - 8026790
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8026827 taagagaaatgatatttatacaatcaatttgtgacaac 8026790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 18568886 - 18568841
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||    
T  18568886 gagaaatgatatttatacaaccattttgtgacaacttttggacaac 18568841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 169573 - 169529
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaactttttgacaa 169529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 4896574 - 4896526
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| || ||||||||||| ||||||||||    
T  4896574 taagagaaatgatatttgtacaaccactttgtgacaactttttgacaac 4896526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 23094374 - 23094421
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| |||||||||||||||| ||| ||| ||||||    
T  23094374 aagagaaatgatatttgtacaatcattttgtgataacttttagacaac 23094421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 39010208 - 39010165
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgaca 200  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||    
T  39010208 gagaaatgatatttgtacaaccattttgtgacaactttttgaca 39010165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 51296262 - 51296215
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| |||||||| ||| ||||||| ||||||||||    
T  51296262 aagagaaatgatatttgtacaatcactttatgacaactttttgacaac 51296215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 47998593 - 47998639
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| |||||||| ||||| ||||||||||    
T  47998593 agagaaatgatatttgtacaaccattttgtaacaactttttgacaac 47998639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 515694 - 515657
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaaccttt 195  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  515694 agaaatgatatttatacaattattttttgacaaccttt 515657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 925130 - 925089
Alignment:
Q  160 aaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    ||||||||||||||||| |||||||||||||| ||| |||||    
T  925130 aaatgatatttatacaaccattttgtgacaacttttagacaa 925089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 11064160 - 11064115
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaactttttgacaac 11064115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 13252537 - 13252582
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||||||||||| ||  ||||||||||    
T  13252537 gagaaatgatatttatataatcattttgtgataattttttgacaac 13252582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 22071496 - 22071541
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| |||||| |||| |||||||| ||||||||||    
T  22071496 gagaaatgatatttgtacaattatttagtgacaactttttgacaac 22071541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 34116612 - 34116567
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    ||||||||||||||| ||||| || ||||||||||| |||||||||    
T  34116612 agagaaatgatatttgtacaaccactttgtgacaactttttgacaa 34116567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 38864809 - 38864768
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaacctttt 196  Q
    |||||||||||||||| |||||| ||||||||||||| ||||    
T  38864809 aagagaaatgatatttgtacaattattttgtgacaacttttt 38864768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 39881101 - 39881056
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||||    
T  39881101 gagaaatgatatttgtacaatcattttctaacaactttttgacaac 39881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 41262692 - 41262655
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  41262692 taagagaaatgatatttgtacaattattttgtgacaac 41262655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 52697480 - 52697509
Alignment:
Q  154 taagagaaatgatatttatacaatcatttt 183  Q
    ||||||||||||||||||||||||||||||    
T  52697480 taagagaaatgatatttatacaatcatttt 52697509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 3222987 - 3223023
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| |||||||| |||||||||||    
T  3222987 aagagaaatgatatttgtacaatcaatttgtgacaac 3223023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 24235317 - 24235353
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaa 190  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  24235317 taagagaaatgatatttgtacaatcaatttgtgacaa 24235353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 31221411 - 31221447
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| |||||||| |||||||||||    
T  31221411 aagagaaatgatatttgtacaatcaatttgtgacaac 31221447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 40590610 - 40590646
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  40590610 aagagaaatgatatttaaacaattattttgtgacaac 40590646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 44368275 - 44368239
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| |||||||| |||||||||||    
T  44368275 aagagaaatgatatttgtacaatcaatttgtgacaac 44368239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 54036591 - 54036555
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  54036591 aagagaaatgatatttgtacaaccattttgtgacaac 54036555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 15722576 - 15722529
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  15722576 aagagaaatgatatttgtacaatcattttgtgacaactttttgacaac 15722529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 30945821 - 30945857
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||||||||||||||||||||||||    
T  30945821 aagagaaatgatatttatacaatcattttgtgacaac 30945857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 30714679 - 30714725
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||    
T  30714679 agagaaatgatatttgtacaatcattttgtgacagctttttgacaac 30714725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 28965914 - 28965866
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| |||||||| ||||| ||||||||||    
T  28965914 taagagaaatgatatttgtacaaccattttgttacaactttttgacaac 28965866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 11785353 - 11785400
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  11785353 aagagaaatgatatttgtacaaccattttgtgacaattttttgacaac 11785400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 31417368 - 31417333
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||||||||||||||| |||||||    
T  31417368 agagaaatgatatttatacaatcattttatgacaac 31417333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 9954547 - 9954593
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| || ||||||||||| ||||||||||    
T  9954547 agagaaatgatatttgtacaaccaatttgtgacaactttttgacaac 9954593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 30906735 - 30906689
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| |||| ||||||| ||||||| ||||||||||    
T  30906735 agagaaatgatatttctacattcattttatgacaactttttgacaac 30906689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 29376786 - 29376741
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| |||||||||||||| |||| |||||    
T  29376786 gagaaatgatatttttacaaccattttgtgacaactttttaacaac 29376741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 32784738 - 32784783
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| |||||| ||||||| ||||| ||||||||||    
T  32784738 gagaaatgatatttgtacaattattttgttacaactttttgacaac 32784783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 1246429 - 1246397
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaa 190  Q
    ||||||||||||| |||||||||||||||||||    
T  1246429 agaaatgatatttttacaatcattttgtgacaa 1246397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 3088969 - 3089017
Alignment:
Q  153 ctaagagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||||||| ||||| ||||| |||||||| ||| |||||    
T  3088969 ctaagagaaatgatatttgtacaaccatttagtgacaacttttagacaa 3089017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 3180065 - 3180029
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| |||||||||||| |||||||    
T  3180065 aagagaaatgatatttgtacaatcattttttgacaac 3180029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 3339572 - 3339536
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  3339572 aagagaaatgatatttgtacaaccattttgtgacaac 3339536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 12044329 - 12044377
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||||||||||  ||||| ||||||| ||| ||||||    
T  12044329 taagagaaatgatatttatacaactattttttgacaacttttagacaac 12044377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 15666847 - 15666799
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| |||||| ||||||| |||| |||||    
T  15666847 taagagaaatgatatttgtacaaccattttctgacaactttttaacaac 15666799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 19789150 - 19789102
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| |||||| | ||||| ||||||||||    
T  19789150 taagagaaatgatatttgtacaaccattttattacaactttttgacaac 19789102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 29383554 - 29383602
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| || ||| ||||||| ||||||||||    
T  29383554 taagagaaatgatatttgtacaaccactttctgacaactttttgacaac 29383602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 32457323 - 32457279
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||| ||||| || ||||||||||| |||||||||    
T  32457323 gagaaatgatatttgtacaaccactttgtgacaactttttgacaa 32457279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 34413089 - 34413137
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| |||||||||||||  ||||  ||||||||||    
T  34413089 taagagaaatgatatttgtacaatcattttgctacaattttttgacaac 34413137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 29314303 - 29314357
Alignment:
Q  42 tatccatcgacattagcactgtattcgtccacaaactggtaaacatcctttccct 96  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||| |||||||||    
T  29314303 tatccatcaacattagcaccgtatttgtccacaaactggtaaacaccctttccct 29314357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 18373845 - 18373892
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  18373845 aagagaaatgatatttgtacaatcattttatgacaacattttgacaac 18373892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 31296918 - 31296871
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  31296918 aagagaaatgatatttgtacaaccattttgtgacaacgttttgacaac 31296871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 30974060 - 30974015
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||    
T  30974060 gagaaatgatatttttacaatcattttatgacaactttttgacaac 30974015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 33296145 - 33296097
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| || ||||||||||| ||||||||||    
T  33296145 taagagaaatgatatttgtacaaccactttgtgacaactttttgacaac 33296097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 33417274 - 33417242
Alignment:
Q  159 gaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||||||||||||||||||||    
T  33417274 gaaatgatatttatacaatcattttgtgacaac 33417242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 4738645 - 4738598
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| || ||||||||||| ||||||||||    
T  4738645 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaac 4738598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 22353236 - 22353201
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||| ||||||||||||||||||||    
T  22353236 agagaaatgatatttgtacaatcattttgtgacaac 22353201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 2308394 - 2308348
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| || ||| ||||||||||||||||||    
T  2308394 agagaaatgatatttgtacaaccaatttttgacaaccttttgacaac 2308348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 10749752 - 10749706
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||||| ||||| |||||| |||||| ||||||||||    
T  10749752 aagagaaatgatatttgtacaaccattttatgacaatcttttgacaa 10749706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 36909915 - 36909869
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| |||||||||||||| ||| ||||||    
T  36909915 agagaaatgatatttgtacaaccattttgtgacaacttttggacaac 36909869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 5455524 - 5455479
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||  || ||||||||||||||||||||||    
T  5455524 gagaaatgatatttgtacatccactttgtgacaaccttttgacaac 5455479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 19529539 - 19529576
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  19529539 taagaaaaatgatatttatacaaccattttgtgacaac 19529576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 29795444 - 29795481
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  29795444 taagagaaatgatatttgtacaaccattttgtgacaac 29795481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 39247534 - 39247489
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| |||||||||| ||| ||||||||||    
T  39247534 gagaaatgatatttgtacaaccattttgtgataactttttgacaac 39247489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 4344449 - 4344485
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaacct 193  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  4344449 gagaaatgatatttgtacaaccattttgtgacaacct 4344485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 6215307 - 6215267
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaacctt 194  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  6215307 taagagaaatgatatttatacaactattttgttacaacctt 6215267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 21805857 - 21805813
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||| ||||||||||| |||||||| ||| |||||    
T  21805857 gagaaatgatatttgtacaatcatttagtgacaacttttagacaa 21805813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 27307304 - 27307268
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| |||||||| |||||||||||    
T  27307304 aagagaaatgatatttgtacaatcaatttgtgacaac 27307268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 30413800 - 30413752
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| |||||||  ||||| ||||||||||    
T  30413800 taagagaaatgatatttgtacaaccattttgctacaactttttgacaac 30413752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 35171300 - 35171264
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaa 190  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  35171300 taagagaaatgatatttgtacaaccattttgtgacaa 35171264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 42607593 - 42607557
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaa 190  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  42607593 taagagaaatgatatttgtacaattattttgtgacaa 42607557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 42665886 - 42665838
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| |||||||| ||| | ||||| ||||||||||    
T  42665886 taagagaaatgatatttgtacaatcactttattacaactttttgacaac 42665838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 44085271 - 44085307
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaa 190  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  44085271 taagataaatgatatttatacaattattttgtgacaa 44085307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 44105161 - 44105129
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaa 190  Q
    |||||| ||||||||||||||||||||||||||    
T  44105161 agaaattatatttatacaatcattttgtgacaa 44105129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 35272025 - 35272072
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||    
T  35272025 aagagaaatgatatttgtacaaccactttgtgacaaccttttgacaac 35272072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 31206921 - 31206877
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||    
T  31206921 agaaatgatatttgtacaatcattttgtgacaaatttttgacaac 31206877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 7287 - 7240
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||||    
T  7287 aagagaaatgatatttgtacaatcattttctgacaacttttggacaac 7240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 43333743 - 43333696
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| |||| ||||||| ||||||| ||||||||||    
T  43333743 aagagaaatgatatttgtacagtcattttatgacaactttttgacaac 43333696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 18169155 - 18169201
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||||| ||||| || ||||||||||| |||||||||    
T  18169155 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaa 18169201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 35074164 - 35074122
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaacctttt 196  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||    
T  35074164 taagagaaatgatatttgtacaatcattttgggacaacttttt 35074122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 41877683 - 41877637
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| || ||||||||| ||||||||||||    
T  41877683 agagaaatgatatttgtacaaccactttgtgacacccttttgacaac 41877637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 43169816 - 43169774
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaacctttt 196  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||    
T  43169816 taagagaaatgatatttgtacaaccattttgtgacaacttttt 43169774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 49196694 - 49196740
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||||| ||||| |||||||||||||| || ||||||    
T  49196694 aagagaaatgatatttgtacaaccattttgtgacaactttgtgacaa 49196740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 462472 - 462427
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||||||    
T  462472 gagaaatgatatttgtacaaccattttgtgacaacttttagacaac 462427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 1765401 - 1765438
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  1765401 taagagaaatgatatttgtacattcattttgtgacaac 1765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 19418228 - 19418183
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| |||||| ||||||| ||||||||||    
T  19418228 gagaaatgatatttgtacaaccattttatgacaactttttgacaac 19418183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 32575465 - 32575424
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaacctttt 196  Q
    |||||||||||||||| || || |||||||||||||||||||    
T  32575465 aagagaaatgatatttgtataaccattttgtgacaacctttt 32575424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 48405407 - 48405444
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  48405407 taagagaaatgatatttgtacaaccattttgtgacaac 48405444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 51464343 - 51464298
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||    
T  51464343 gagaaatgatatttgtacaaccactttgtgacaactttttgacaac 51464298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 108428 - 108476
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| || ||||||||||  ||||||||||    
T  108428 taagagaaatgatatttgtacaaccactttgtgacaattttttgacaac 108476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 8254025 - 8254061
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  8254025 aagagaaatgatatttgtacaaccattttgtgacaac 8254061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 11335376 - 11335328
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| |||||| | ||||| ||||||||||    
T  11335376 taagagaaatgatatttgtacaaccattttctaacaactttttgacaac 11335328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 31017465 - 31017421
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||    
T  31017465 gagaaatgatatttgtacaatcattttctaacaactttttgacaa 31017421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 33256306 - 33256342
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaa 190  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  33256306 taagagaaatgatatttatacaaccattttgagacaa 33256342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 52454167 - 52454131
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| |||||||| |||||||||||    
T  52454167 aagagaaatgatatttgtacaatcaatttgtgacaac 52454131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 52564708 - 52564672
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaa 190  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  52564708 taagagaaatgatatttgtacaaccattttgtgacaa 52564672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 6161947 - 6161993
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  6161947 agagaaatgatatttgtacaaccattttatgacaaccttttgacaac 6161993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 6849332 - 6849287
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||    
T  6849332 gagaaatgatatttatacaaccattttgtgacaacttttagacaac 6849287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 36064029 - 36064074
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||    
T  36064029 agagaaatgatatttgtacaatcattttgtgacaacttttggacaa 36064074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 39021517 - 39021469
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| |||||||||| ||| ||||||||||    
T  39021517 taagagaaatgatatttgtacaaccattttgtgataactttttgacaac 39021469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 44380687 - 44380647
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttt 195  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  44380687 aagagaaatgatatttgtacaaccattttgtgacaaccttt 44380647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 21418665 - 21418618
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| || ||| ||||||||||||||||||    
T  21418665 aagagaaatgatatttgtacaaccactttctgacaaccttttgacaac 21418618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 40719716 - 40719669
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| |||||| | ||||||||||||||||    
T  40719716 aagagaaatgatatttgtacaaccattttctaacaaccttttgacaac 40719669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 45101394 - 45101441
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| || ||||||||||| ||||||||||    
T  45101394 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaac 45101441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 26294187 - 26294233
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||||  ||||| |||||||||||||| |||||||||    
T  26294187 aagagaaatgatattggtacaaccattttgtgacaactttttgacaa 26294233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 26307444 - 26307490
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||||  ||||| |||||||||||||| |||||||||    
T  26307444 aagagaaatgatattggtacaaccattttgtgacaactttttgacaa 26307490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 34473947 - 34473993
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||||| |||| ||| |||||||||| ||||||||||    
T  34473947 aagagaaatgatatttgtacattcactttgtgacaatcttttgacaa 34473993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 34970206 - 34970252
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||||| |||||| ||||| ||||||||||    
T  34970206 agagaaatgatatttgtacaatccttttgtaacaactttttgacaac 34970252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 42443103 - 42443149
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||||||||| |||||||| ||| ||||||    
T  42443103 agagaaatgatatttgtacaatcatttagtgacaacttttagacaac 42443149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 6806909 - 6806942
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||| ||||||||||||||||||||    
T  6806909 agaaatgatatttgtacaatcattttgtgacaac 6806942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 13884231 - 13884186
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| |||||||||||| ||||||| || |||||||    
T  13884231 gagaaatgatatttgtacaatcattttttgacaactttgtgacaac 13884186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 26871046 - 26871091
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| |||||||| ||| ||||||| ||||||||||    
T  26871046 gagaaatgatatttgtacaatcactttatgacaactttttgacaac 26871091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 39719323 - 39719278
Alignment:
Q  153 ctaagagaaatgatatttatacaatcattttgtgacaaccttttga 198  Q
    |||| ||||||||||||| |||||||| ||||||||||| ||||||    
T  39719323 ctaaaagaaatgatatttgtacaatcaatttgtgacaactttttga 39719278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 41344740 - 41344695
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  41344740 gagaaatgatatttgtacaatcagtttgtgataactttttgacaac 41344695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 43873762 - 43873717
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| |||||||||||||  ||||||||||    
T  43873762 gagaaatgatatttgtacaaccattttgtgacaattttttgacaac 43873717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 7596962 - 7596918
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||| |||||||| ||||||||||| | |||||||    
T  7596962 gagaaatgatatttgtacaatcactttgtgacaacttcttgacaa 7596918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 11223933 - 11223885
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||  |||||||||||||| | ||||||||    
T  11223933 taagagaaatgatatttgtacatccattttgtgacaacttcttgacaac 11223885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 14710955 - 14710919
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  14710955 aagataaatgatatttgtacaatcattttgtgacaac 14710919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 21273781 - 21273737
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||| ||||| |||||||||||||| | |||||||    
T  21273781 gagaaatgatatttgtacaaccattttgtgacaacttcttgacaa 21273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 22852913 - 22852865
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| || ||||||||||| | ||||||||    
T  22852913 taagagaaatgatatttgtacaaccactttgtgacaacttcttgacaac 22852865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 36497658 - 36497706
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| |||||  ||||||||||||| ||| ||||||    
T  36497658 taagagaaatgatatttgtacaactattttgtgacaacttttagacaac 36497706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 40413411 - 40413375
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| |||||| |||||||||||||    
T  40413411 aagagaaatgatatttgtacaattattttgtgacaac 40413375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 40842011 - 40842059
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| || ||||||| ||| ||||||||||    
T  40842011 taagagaaatgatatttgtacaaccactttgtgataactttttgacaac 40842059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 44086585 - 44086545
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaacctttt 196  Q
    ||||||||||||||| || ||||||||| ||||||||||||    
T  44086585 agagaaatgatatttgtaaaatcattttatgacaacctttt 44086545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 8897381 - 8897427
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  8897381 agagaaatgatatttgtacaaccattttatgacaaccttttgacaac 8897427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 7927353 - 7927385
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtga 187  Q
    |||||||||||||||||||||||||||||||||    
T  7927353 aagagaaatgatatttatacaatcattttgtga 7927385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 14914370 - 14914417
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| |||||||||||||| ||| ||||||    
T  14914370 aagagaaatgatatttgtacaaccattttgtgacaacttttggacaac 14914417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 38500941 - 38500988
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  38500941 aagagaaatgatatttgtacaaccattttgtgacaattttttgacaac 38500988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 3771078 - 3771032
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||| | ||||| |||||||||||||| ||||||||||    
T  3771078 agagaaatgatatctgtacaaccattttgtgacaactttttgacaac 3771032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 27440479 - 27440513
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||| ||||||||||||||||||||    
T  27440479 gagaaatgatatttgtacaatcattttgtgacaac 27440513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 41460116 - 41460150
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||||||||||||| |||||||    
T  41460116 gagaaatgatatttatacaatcattttttgacaac 41460150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 12718451 - 12718406
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||    
T  12718451 gagaaatgatatttgtacaaccaatttgtgacaactttttgacaac 12718406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 12779677 - 12779632
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||    
T  12779677 gagaaatgatatttgtacaaccaatttgtgacaactttttgacaac 12779632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 34381012 - 34381057
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||    
T  34381012 gagaaatgatatttgtacaaccactttgtgacaactttttgacaac 34381057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 39595272 - 39595317
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||    
T  39595272 gagaaatgatatttgtacaaccactttgtgacaactttttgacaac 39595317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 42699057 - 42699098
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttga 198  Q
    |||||||||||||| ||||| |||||||||||||| ||||||    
T  42699057 gagaaatgatatttgtacaaccattttgtgacaactttttga 42699098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 26660485 - 26660437
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||  |||||||||||||| | ||||||||    
T  26660485 taagagaaatgatatttgtacatccattttgtgacaacttcttgacaac 26660437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 26932077 - 26932029
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||  |||||||||||||| | ||||||||    
T  26932077 taagagaaatgatatttgtacatccattttgtgacaacttcttgacaac 26932029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 30530646 - 30530600
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  30530646 agagaaatgatatttatacaaccattttgtgacaacttttagacaac 30530600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 50226953 - 50226905
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||| ||||| || ||||||||||| ||||||||||    
T  50226953 taagagaaatgatatttgtacaaccactttgtgacaactttttgacaac 50226905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 50797789 - 50797825
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| ||||||||||||||||||||    
T  50797789 aagagaaatgatatttgtacaatcattttgtgacaac 50797825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 52714979 - 52715023
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||    
T  52714979 agaaatgatatttgtacaatcattttgtgacaacttttttacaac 52715023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 11812385 - 11812432
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||| || |||||||||||||||||||  ||||||||||    
T  11812385 aagagaaatgatagttgtacaatcattttgtgacaattttttgacaac 11812432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 16836175 - 16836136
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaacctttt 196  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaacttttt 16836136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 18959005 - 18959048
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||    
T  18959005 agaaatgatatttatacaaccattttgttacaactttttgacaa 18959048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 40610227 - 40610274
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||    
T  40610227 aagagaaatgatatttatacattcattttatgacaattttttgacaac 40610274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 34974820 - 34974786
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||||||| ||||||||||||||    
T  34974820 gagaaatgatatttatacaaccattttgtgacaac 34974786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 39669805 - 39669851
Alignment:
Q  156 agagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  39669805 agagaaatgatatttgtacaaccattttgtgacaattttttgacaac 39669851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 44672103 - 44672057
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||||| |||||||||||| | ||||| |||||||||    
T  44672103 aagagaaatgatatttgtacaatcattttttaacaactttttgacaa 44672057  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 21446281 - 21446252
Alignment:
Q  154 taagagaaatgatatttatacaatcatttt 183  Q
    ||||||||||||||||||||||||||||||    
T  21446281 taagagaaatgatatttatacaatcatttt 21446252  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 25302716 - 25302675
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaacctttt 196  Q
    |||||||||||||||| ||||| || ||||||||||||||||    
T  25302716 aagagaaatgatatttgtacaaccactttgtgacaacctttt 25302675  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 27687582 - 27687545
Alignment:
Q  154 taagagaaatgatatttatacaatcattttgtgacaac 191  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  27687582 taagagaaatgatatttgtacaaccattttgtgacaac 27687545  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 51037978 - 51038011
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||||||||||||| |||||||    
T  51037978 agaaatgatatttatacaatcattttttgacaac 51038011  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 9011643 - 9011679
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  9011643 aagagaaatgatatttgtacaaccattttgtgacaac 9011679  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 9882729 - 9882685
Alignment:
Q  158 agaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    ||||||||||||| |||||  ||||||||||||| ||||||||||    
T  9882729 agaaatgatatttgtacaactattttgtgacaacattttgacaac 9882685  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 13078842 - 13078870
Alignment:
Q  156 agagaaatgatatttatacaatcattttg 184  Q
    |||||||||||||||||||||||||||||    
T  13078842 agagaaatgatatttatacaatcattttg 13078870  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 40596116 - 40596080
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  40596116 aagagaaatgatatttgtacaaccattttgtgacaac 40596080  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 40612112 - 40612148
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  40612112 aagagaaatgatatttgtacaaccattttgtgacaac 40612148  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 42256458 - 42256494
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaac 191  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  42256458 aagagaaatgatatttgtacaaccattttgtgacaac 42256494  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 50528128 - 50528084
Alignment:
Q  157 gagaaatgatatttatacaatcattttgtgacaaccttttgacaa 201  Q
    |||||||||||||| |||||||| ||||||||||| ||| |||||    
T  50528128 gagaaatgatatttgtacaatcaatttgtgacaacttttagacaa 50528084  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 219737 - 219690
Alignment:
Q  155 aagagaaatgatatttatacaatcattttgtgacaaccttttgacaac 202  Q
    |||||||||||||||| ||||| || ||||||||||| ||||||||||    
T  219737 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaac 219690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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