View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_295 (Length: 272)
Name: NF11453A_low_295
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_295 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 7654004 - 7654253
Alignment:
| Q |
18 |
ccatcttgtgcaagaaacccacttgaaggatactattgatacattgatgattaatatgaaagtatatgaggctagcaatcatgatttacttttctaacac |
117 |
Q |
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| T |
7654004 |
ccatcttgtgcaagaaacccacttgaaggatattattgatacattgatgattaatatgaaagtatatgtgattagcaatcatgatttacttttctaacac |
7654103 |
T |
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| Q |
118 |
tcgtatacaaaatgtctccttactcatgtcacaacacaatttataatatatatcacactcattccattgcatcgccactatattattttgaaactaaaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7654104 |
tcgtatacaaaatgtctccttactcatgtcacaacacaatttataatatatatcacactcattccattgcatcgccactatattattttgaaactaaaat |
7654203 |
T |
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| Q |
218 |
gcattacaaataaacttggtcagttctgtttgtcctcaaatgttaaggct |
267 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7654204 |
gcattaaaaataaacttggtcagttctgtttgtcctcaaatgttaaggct |
7654253 |
T |
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