View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_330 (Length: 262)
Name: NF11453A_low_330
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_330 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 11213891 - 11214133
Alignment:
| Q |
1 |
aagatgggtttgttcctgtgttgaatttgaaggtgttttcgtacaaggagcttcaattggcgactcgagggttttctgagaaacttgggcatggtgggtt |
100 |
Q |
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| T |
11213891 |
aagatgggtttgttcctgtgttgaatttgaaggtgttttcttacaaggagcttcaattggcgactcgagggttttctgagaaacttgggcatggtgggtt |
11213990 |
T |
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| Q |
101 |
tgggacggtgtttcaaggggagttgagtgattctactgttgttgctgtgaaacgtttagagaggccgggaggtggagagaaagagtttagggctgaggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11213991 |
tgggacggtgtttcaaggggagttgagtgattctactgttgttgctgtgaaacgtttagagaggccgggaggtggagagaaagagtttagggctgaggtt |
11214090 |
T |
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| Q |
201 |
tcaacgattgggaacattcagcatgttaatcttgtgaggttaa |
243 |
Q |
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| T |
11214091 |
tcaacaattgggaacattcagcatgttaatcttgtgaggttaa |
11214133 |
T |
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