View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_367 (Length: 251)
Name: NF11453A_low_367
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_367 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 30629493 - 30629733
Alignment:
| Q |
7 |
tgtatctttgtattcaacttctagtttgaaggtgcttatgagtttatgctttcttccgattttgtgttgtaaattaaacattttaattttatgctatggt |
106 |
Q |
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| T |
30629493 |
tgtatctttgtattcaacttctagtttgaaggtgcttatgagtttatgctttcttccgattttgtgttgtatattaaacattttaattttatgatatggt |
30629592 |
T |
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| Q |
107 |
tataatgtagattagggaccaatttgtgattggtttgagacttgagtggtaaggaactcgagtactttaaacaagtggtcagaagtttgatttatgactc |
206 |
Q |
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| T |
30629593 |
tataatgtagattagggaccaacttgtgattggtttgagatttgagtggtaaggaactcgagtactttaaacaagtggtcagaagtttgatttacgactc |
30629692 |
T |
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| Q |
207 |
ttgtatttgaagaaaatctagttggaagagaataatatacc |
247 |
Q |
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| T |
30629693 |
ttgtatttgaagaaaatctaattggaagagaagaatttacc |
30629733 |
T |
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