View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_447 (Length: 243)
Name: NF11453A_low_447
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_447 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 30888984 - 30888749
Alignment:
| Q |
8 |
aatgagatggacatcattagtccttcaagcgttggatcagtttctaagttgaattcttgtttgatgtatctcatgccacctgcagtgattttgtagtatc |
107 |
Q |
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| T |
30888984 |
aatgacatggacacaattagtccttcaagcgttggatcagtttctaagttgaattcttgtttgatgtatctcatgccacctgcagtgattttgtagtatc |
30888885 |
T |
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| Q |
108 |
atacacaacacaagttagcacgacacaaggcgtgttcggacattgacacaacactgatacatgtaaatacattcaattaactcgtctcattaaattttta |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
30888884 |
atacacaacacaagttagcacgacacaaggcgtgttcggacattgacacaacactgatacatgtaaatacattcaattaacttgtctcattaaattttta |
30888785 |
T |
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| Q |
208 |
ccggtgtcaacgtgtcaatgctgtgtccaataatta |
243 |
Q |
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|||||||| |||||||||||||||||||| |||||| |
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| T |
30888784 |
ccggtgtcgacgtgtcaatgctgtgtccagtaatta |
30888749 |
T |
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