View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11453A_low_497 (Length: 236)

Name: NF11453A_low_497
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11453A_low_497
NF11453A_low_497
[»] chr3 (49 HSPs)
chr3 (7-236)||(16626930-16627158)
chr3 (7-236)||(18529999-18530228)
chr3 (19-230)||(15893139-15893350)
chr3 (8-204)||(8295578-8295774)
chr3 (8-204)||(8301723-8301919)
chr3 (8-204)||(4797112-4797308)
chr3 (8-204)||(15741541-15741737)
chr3 (8-204)||(18050865-18051061)
chr3 (8-198)||(4721234-4721424)
chr3 (8-198)||(35880369-35880559)
chr3 (8-204)||(29149214-29149410)
chr3 (8-198)||(18330277-18330467)
chr3 (8-198)||(6191919-6192109)
chr3 (8-198)||(8211344-8211534)
chr3 (8-198)||(18277517-18277707)
chr3 (8-198)||(18292818-18293008)
chr3 (8-198)||(18308119-18308309)
chr3 (19-198)||(10395750-10395929)
chr3 (59-198)||(22871339-22871478)
chr3 (59-198)||(22886398-22886537)
chr3 (92-198)||(5466672-5466778)
chr3 (68-198)||(5596831-5596961)
chr3 (8-198)||(7072815-7073005)
chr3 (8-198)||(28116422-28116612)
chr3 (8-198)||(47023056-47023246)
chr3 (91-198)||(18224877-18224984)
chr3 (8-186)||(5013315-5013493)
chr3 (20-198)||(6542939-6543117)
chr3 (91-192)||(4347155-4347256)
chr3 (91-192)||(28020964-28021065)
chr3 (91-186)||(17985433-17985528)
chr3 (59-198)||(18242381-18242520)
chr3 (59-198)||(20577327-20577466)
chr3 (56-186)||(7996213-7996343)
chr3 (56-186)||(10642721-10642851)
chr3 (98-204)||(20065739-20065845)
chr3 (8-198)||(21674296-21674486)
chr3 (68-198)||(36997554-36997684)
chr3 (68-198)||(51781674-51781804)
chr3 (59-198)||(11110826-11110965)
chr3 (92-198)||(4416603-4416709)
chr3 (68-198)||(24327822-24327952)
chr3 (92-198)||(28338989-28339095)
chr3 (92-198)||(31964938-31965044)
chr3 (92-198)||(50134536-50134642)
chr3 (95-198)||(5609787-5609890)
chr3 (68-198)||(51796762-51796893)
chr3 (122-198)||(29665450-29665526)
chr3 (59-198)||(48465569-48465708)
[»] chr2 (36 HSPs)
chr2 (7-236)||(19456793-19457022)
chr2 (7-236)||(21703536-21703765)
chr2 (19-230)||(27434825-27435036)
chr2 (7-189)||(27392630-27392812)
chr2 (8-204)||(23128973-23129169)
chr2 (8-204)||(28881852-28882048)
chr2 (8-204)||(20837556-20837752)
chr2 (8-204)||(12655180-12655376)
chr2 (8-192)||(37374799-37374983)
chr2 (59-198)||(261178-261317)
chr2 (8-198)||(34279087-34279277)
chr2 (91-198)||(12717018-12717125)
chr2 (59-198)||(13936957-13937096)
chr2 (92-198)||(21677595-21677701)
chr2 (59-198)||(12586490-12586629)
chr2 (91-198)||(31876002-31876109)
chr2 (59-198)||(34286043-34286182)
chr2 (59-198)||(34291103-34291242)
chr2 (91-198)||(34861401-34861508)
chr2 (91-198)||(37686322-37686429)
chr2 (91-198)||(37701587-37701694)
chr2 (59-198)||(37925182-37925321)
chr2 (91-198)||(39889783-39889890)
chr2 (59-198)||(9350407-9350546)
chr2 (91-186)||(16829763-16829858)
chr2 (91-186)||(16891623-16891718)
chr2 (59-198)||(27776896-27777035)
chr2 (59-198)||(27803381-27803520)
chr2 (59-198)||(27816663-27816802)
chr2 (59-198)||(40233188-40233327)
chr2 (8-198)||(11635602-11635792)
chr2 (8-198)||(11641791-11641981)
chr2 (68-198)||(19416912-19417042)
chr2 (92-198)||(22926441-22926547)
chr2 (98-186)||(32049526-32049614)
chr2 (59-171)||(39052268-39052380)
[»] scaffold0124 (2 HSPs)
scaffold0124 (7-236)||(20053-20282)
scaffold0124 (8-204)||(30095-30291)
[»] chr4 (23 HSPs)
chr4 (7-236)||(15227529-15227758)
chr4 (9-236)||(15285311-15285538)
chr4 (7-236)||(1899916-1900145)
chr4 (7-208)||(14235939-14236140)
chr4 (8-204)||(14664675-14664871)
chr4 (7-184)||(15391771-15391948)
chr4 (8-204)||(17013657-17013853)
chr4 (8-198)||(24592735-24592925)
chr4 (8-198)||(14763728-14763918)
chr4 (8-198)||(36344936-36345126)
chr4 (8-198)||(6569510-6569700)
chr4 (8-198)||(14098198-14098388)
chr4 (8-198)||(19372918-19373108)
chr4 (91-198)||(31126942-31127049)
chr4 (8-186)||(27163753-27163931)
chr4 (91-198)||(30753482-30753589)
chr4 (59-198)||(54833098-54833237)
chr4 (68-198)||(18801046-18801176)
chr4 (68-198)||(33674234-33674364)
chr4 (20-198)||(40106062-40106240)
chr4 (8-186)||(5005527-5005705)
chr4 (91-186)||(21969441-21969536)
chr4 (59-198)||(39850331-39850470)
[»] chr7 (27 HSPs)
chr7 (19-236)||(16040980-16041197)
chr7 (7-236)||(16450267-16450496)
chr7 (8-204)||(16518720-16518916)
chr7 (8-204)||(16503684-16503880)
chr7 (8-204)||(2154216-2154412)
chr7 (8-204)||(10917169-10917365)
chr7 (8-197)||(11425087-11425276)
chr7 (8-198)||(5127635-5127825)
chr7 (8-198)||(31124554-31124744)
chr7 (56-198)||(45387034-45387176)
chr7 (8-198)||(5147650-5147840)
chr7 (8-198)||(24592851-24593041)
chr7 (59-198)||(9618345-9618484)
chr7 (91-198)||(26275404-26275511)
chr7 (92-198)||(4145433-4145539)
chr7 (8-198)||(16736770-16736960)
chr7 (8-198)||(16751824-16752014)
chr7 (8-198)||(17523175-17523365)
chr7 (8-198)||(17529850-17530040)
chr7 (93-198)||(26320179-26320284)
chr7 (91-198)||(3445020-3445127)
chr7 (68-198)||(11441263-11441393)
chr7 (91-198)||(26486054-26486161)
chr7 (59-198)||(26670224-26670363)
chr7 (91-198)||(31564709-31564816)
chr7 (8-192)||(26434900-26435084)
chr7 (59-198)||(26538183-26538322)
[»] chr1 (6 HSPs)
chr1 (7-236)||(20460748-20460977)
chr1 (7-208)||(16208439-16208640)
chr1 (8-204)||(41793726-41793922)
chr1 (59-198)||(10962362-10962501)
chr1 (59-198)||(51637910-51638049)
chr1 (68-198)||(28584682-28584812)
[»] chr5 (45 HSPs)
chr5 (6-230)||(23891855-23892079)
chr5 (7-230)||(25198682-25198905)
chr5 (8-202)||(24951761-24951955)
chr5 (8-204)||(24688472-24688668)
chr5 (8-204)||(30934287-30934483)
chr5 (8-204)||(23752765-23752961)
chr5 (8-204)||(23718303-23718500)
chr5 (8-204)||(11549005-11549201)
chr5 (9-204)||(22999429-22999624)
chr5 (8-198)||(33777138-33777328)
chr5 (8-198)||(15659081-15659271)
chr5 (20-198)||(40473873-40474051)
chr5 (59-204)||(2510753-2510898)
chr5 (59-198)||(9317153-9317292)
chr5 (59-198)||(6874004-6874143)
chr5 (91-198)||(12131889-12131996)
chr5 (91-198)||(24681171-24681278)
chr5 (91-198)||(24723698-24723805)
chr5 (91-198)||(37771320-37771427)
chr5 (8-198)||(5637561-5637751)
chr5 (92-198)||(8665796-8665902)
chr5 (56-198)||(15759178-15759320)
chr5 (8-186)||(18375745-18375923)
chr5 (8-186)||(30151669-30151847)
chr5 (20-198)||(37358976-37359154)
chr5 (59-192)||(9548870-9549003)
chr5 (68-192)||(41674420-41674544)
chr5 (59-198)||(18501069-18501208)
chr5 (59-198)||(26480094-26480233)
chr5 (59-186)||(30168171-30168298)
chr5 (59-198)||(31431130-31431269)
chr5 (91-198)||(31826740-31826847)
chr5 (91-198)||(37671813-37671920)
chr5 (59-198)||(37754670-37754809)
chr5 (8-198)||(3789177-3789367)
chr5 (171-236)||(22888287-22888352)
chr5 (59-204)||(34616223-34616368)
chr5 (91-186)||(33516090-33516185)
chr5 (8-198)||(43077900-43078090)
chr5 (91-204)||(32599784-32599897)
chr5 (59-198)||(13325165-13325304)
chr5 (68-186)||(28648937-28649055)
chr5 (91-197)||(28960120-28960226)
chr5 (68-198)||(29967387-29967517)
chr5 (68-198)||(30029126-30029256)
[»] chr8 (19 HSPs)
chr8 (8-230)||(16283091-16283313)
chr8 (8-204)||(19687740-19687936)
chr8 (7-201)||(22081252-22081446)
chr8 (8-204)||(16277196-16277392)
chr8 (8-204)||(14557269-14557465)
chr8 (8-204)||(2137636-2137832)
chr8 (8-204)||(27609282-27609478)
chr8 (8-198)||(18710228-18710418)
chr8 (8-198)||(19674080-19674270)
chr8 (68-198)||(31490133-31490263)
chr8 (92-204)||(31354250-31354362)
chr8 (91-198)||(19208743-19208850)
chr8 (59-198)||(19286158-19286297)
chr8 (59-186)||(28362350-28362477)
chr8 (20-198)||(3329902-3330080)
chr8 (20-198)||(29828967-29829145)
chr8 (59-198)||(19518526-19518665)
chr8 (68-198)||(33258425-33258555)
chr8 (8-198)||(12093116-12093306)
[»] scaffold0089 (3 HSPs)
scaffold0089 (8-230)||(29405-29627)
scaffold0089 (8-204)||(40487-40683)
scaffold0089 (8-204)||(47403-47599)
[»] scaffold0109 (1 HSPs)
scaffold0109 (7-199)||(21208-21400)
[»] scaffold0143 (1 HSPs)
scaffold0143 (8-204)||(26934-27130)
[»] chr6 (37 HSPs)
chr6 (8-204)||(13299312-13299508)
chr6 (8-204)||(22935238-22935434)
chr6 (8-204)||(23857683-23857879)
chr6 (8-204)||(24863356-24863552)
chr6 (7-199)||(20160345-20160534)
chr6 (7-199)||(22172297-22172486)
chr6 (8-204)||(15424678-15424874)
chr6 (8-204)||(26988640-26988836)
chr6 (8-204)||(26999712-26999908)
chr6 (59-204)||(24304979-24305124)
chr6 (59-198)||(26918070-26918209)
chr6 (8-192)||(16749493-16749677)
chr6 (8-198)||(29549117-29549307)
chr6 (8-204)||(27044029-27044225)
chr6 (8-198)||(3695702-3695892)
chr6 (8-204)||(17024901-17025097)
chr6 (91-198)||(4525011-4525118)
chr6 (91-198)||(4757483-4757590)
chr6 (59-198)||(4772687-4772826)
chr6 (59-198)||(27007402-27007541)
chr6 (59-198)||(27484807-27484946)
chr6 (91-198)||(29572735-29572842)
chr6 (165-236)||(22477602-22477673)
chr6 (59-198)||(29501096-29501235)
chr6 (91-186)||(30558395-30558490)
chr6 (59-198)||(34463728-34463867)
chr6 (8-198)||(4546151-4546341)
chr6 (68-198)||(16944394-16944524)
chr6 (8-198)||(28207081-28207271)
chr6 (92-192)||(26778000-26778100)
chr6 (91-198)||(27360377-27360484)
chr6 (91-198)||(27450720-27450827)
chr6 (59-198)||(16673817-16673956)
chr6 (20-198)||(4724510-4724688)
chr6 (91-192)||(26116792-26116893)
chr6 (20-201)||(27272947-27273128)
chr6 (20-197)||(27630077-27630254)
[»] scaffold0029 (1 HSPs)
scaffold0029 (8-198)||(554-744)
[»] scaffold0336 (1 HSPs)
scaffold0336 (8-198)||(7874-8064)
[»] scaffold0099 (1 HSPs)
scaffold0099 (8-202)||(48568-48769)
[»] scaffold0144 (1 HSPs)
scaffold0144 (8-198)||(26626-26816)
[»] scaffold0350 (1 HSPs)
scaffold0350 (91-198)||(7663-7770)
[»] scaffold0237 (1 HSPs)
scaffold0237 (8-186)||(15366-15544)
[»] scaffold0038 (1 HSPs)
scaffold0038 (8-198)||(7579-7769)
[»] scaffold0159 (1 HSPs)
scaffold0159 (95-198)||(9490-9593)
[»] scaffold0415 (1 HSPs)
scaffold0415 (59-198)||(5682-5821)
[»] scaffold0496 (1 HSPs)
scaffold0496 (158-198)||(157-197)


Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 236
Target Start/End: Complemental strand, 16627158 - 16626930
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16627158 tgagatggtcaccatggggactcgcctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 16627059  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16627058 ggtaacggtcatcataagaag-aagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 16626960  T
Q  207 tatttccgtcgtacccgtatgcgcaatact 236  Q
    ||  |||||||||||||||||| |||||||    
T  16626959 tacctccgtcgtacccgtatgcacaatact 16626930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 7 - 236
Target Start/End: Original strand, 18529999 - 18530228
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  18529999 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatac 18530098  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||    
T  18530099 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggaactagtcaatccatggctactgttacccctattaatgctgcccagt 18530198  T
Q  207 tatttccgtcgtacccgtatgcgcaatact 236  Q
    ||  ||| ||||||||||||||||||||||    
T  18530199 tacctccatcgtacccgtatgcgcaatact 18530228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 15893350 - 15893139
Alignment:
Q  19 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 118  Q
    |||||| |||||||| ||||||||| |||||||||| || ||||| |||||||||| ||||||||| |  |||||||||||||||||  ||||||| ||     
T  15893350 catgggaactcgtctggaagaagctgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatagtaacggacac 15893251  T
Q  119 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgt 218  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |   ||||||||    
T  15893250 cacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgcccaaatgcctccgtcgt 15893151  T
Q  219 acccgtatgcgc 230  Q
    |||| |||||||    
T  15893150 acccatatgcgc 15893139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 8295578 - 8295774
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||  || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  8295578 gagatggtcaccatgggaactcgtctggaagaagccgtcaaggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 8295677  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  8295678 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 8295774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 8301919 - 8301723
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||| ||||||||||| |    
T  8301919 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcgtcaaagaggtatg 8301820  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  8301819 gtaatggacaccacaagaagaaagaaacggaagtatggatggtgtctgccggagccggtcaatccatggctattgttgctcctatcaatgctgccca 8301723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 4797308 - 4797112
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  4797308 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 4797209  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  4797208 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 4797112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 15741737 - 15741541
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  15741737 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 15741638  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    | || || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  15741637 gcaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 15741541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 18050865 - 18051061
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  18050865 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 18050964  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  18050965 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 18051061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 4721234 - 4721424
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  4721234 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 4721333  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  4721334 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 4721424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 35880369 - 35880559
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  35880369 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 35880468  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  35880469 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 35880559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 29149410 - 29149214
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  29149410 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 29149311  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  29149310 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactattgctcctatcaatgcagccca 29149214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 18330277 - 18330467
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || |||||  ||||||||| ||||||||| |  |||||||| |||||||| |    
T  18330277 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgctcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18330376  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  18330377 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 18330467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 6191919 - 6192109
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  6191919 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 6192018  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| |||||| ||||||| || |  ||||||||||||||||||||||||||||| ||||| |||||    
T  6192019 gtaatggacaccacaagaagaaagaaacggaagtatggatggtgtcagttggagccggtcaatccatggctactgttgctcctatcaatgc 6192109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 8211344 - 8211534
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||| ||||| || | |||||| |||||||| |    
T  8211344 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgagtcctctgcgagtgcatcgaagaggtatg 8211443  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  8211444 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 8211534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 18277707 - 18277517
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18277707 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18277608  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  18277607 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18277517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 18293008 - 18292818
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18293008 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18292909  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  18292908 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18292818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 18308309 - 18308119
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18308309 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18308210  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  18308209 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18308119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 10395750 - 10395929
Alignment:
Q  19 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 118  Q
    |||||| || ||||| || |||||  |||| || || |||||||| || ||||||| ||||||||| |  |||||||| ||||| || ||||| || ||     
T  10395750 catgggaacccgtcttgaggaagccgtcagggatggaattattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatggtaatggacac 10395849  T
Q  119 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  10395850 cacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 10395929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 22871478 - 22871339
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  22871478 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22871379  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  22871378 gagccggtcaatctatggctactgttgcacctatcaatgc 22871339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 22886537 - 22886398
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  22886537 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22886438  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  22886437 gagccggtcaatctatggctactgttgcacctatcaatgc 22886398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 5466672 - 5466778
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    |||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| |||||||||||||| ||||    
T  5466672 gcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatctatggctactgttgcaccta 5466771  T
Q  192 ttaatgc 198  Q
    | |||||    
T  5466772 tcaatgc 5466778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 5596961 - 5596831
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||||||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  5596961 gagaaagttgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 5596862  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||| ||||| ||||| |||||    
T  5596861 aatcaatggctaccgttgctcctatcaatgc 5596831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 7072815 - 7073005
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || |||||||| |    
T  7072815 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagaggtatg 7072914  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||| |||||||||||||||||||||| ||||| |||||    
T  7072915 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccagtcaatccatggctactgttgctcctatcaatgc 7073005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 28116612 - 28116422
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || |||||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  28116612 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaattattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 28116513  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  28116512 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 28116422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 47023056 - 47023246
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||||||  |||||||| |  |||||||| |||||||| |    
T  47023056 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatg 47023155  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  47023156 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 47023246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 18224877 - 18224984
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||    
T  18224877 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcct 18224976  T
Q  191 attaatgc 198  Q
    || |||||    
T  18224977 atcaatgc 18224984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 5013315 - 5013493
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  5013315 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 5013414  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  5013415 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 5013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 6543117 - 6542939
Alignment:
Q  20 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 119  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| ||||| || || |    
T  6543117 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacacc 6543018  T
Q  120 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  6543017 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgcacctatcaatgc 6542939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 4347256 - 4347155
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  4347256 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctcct 4347157  T
Q  191 at 192  Q
    ||    
T  4347156 at 4347155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 28020964 - 28021065
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    ||||||||||||||| |||||||| || || |||||||| ||||| ||||| |||||||| || || |||||||| |||||||||||||||||||| |||    
T  28020964 tgcatcaaagaggtatggtaacggacaccacaagaagaaggaaacggaagtggggatggtgtcagctggagccgggcaatccatggctactgttgctcct 28021063  T
Q  191 at 192  Q
    ||    
T  28021064 at 28021065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 17985528 - 17985433
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    ||||||||| ||||||||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  17985528 tgcatcaaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 17985433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 18242381 - 18242520
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || ||||    
T  18242381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 18242480  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  18242481 gagccggtcaatcaatggctaccgttgctcctatcaatgc 18242520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 20577466 - 20577327
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  20577466 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 20577367  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  20577366 gagccggtcaatcaatggctactgttgctcctatcaatgc 20577327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 7996213 - 7996343
Alignment:
Q  56 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 155  Q
    |||||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  7996213 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 7996312  T
Q  156 ccggagccggtcaatccatggctactgttgc 186  Q
    | |||||||||||||| ||||||||||||||    
T  7996313 ctggagccggtcaatcaatggctactgttgc 7996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 10642721 - 10642851
Alignment:
Q  56 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 155  Q
    |||||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  10642721 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 10642820  T
Q  156 ccggagccggtcaatccatggctactgttgc 186  Q
    | |||||||||||||| ||||||||||||||    
T  10642821 ctggagccggtcaatcaatggctactgttgc 10642851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 20065739 - 20065845
Alignment:
Q  98 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatg 197  Q
    |||||||| ||||| || ||||| ||||||||||| || ||||| |||||||| || || |||||||||||||||||||| |||||||| ||||| ||||    
T  20065739 aagaggtatggtaatggacatcacaagaagaaagatacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcctatcaatg 20065838  T
Q  198 ctgccca 204  Q
    | |||||    
T  20065839 cagccca 20065845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 21674296 - 21674486
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| ||||| || |    
T  21674296 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatg 21674395  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||| |||||||||| || || ||||| |||||    
T  21674396 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaacccatggctaccgtggctcctatcaatgc 21674486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 36997684 - 36997554
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  36997684 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 36997585  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||| ||||| ||||| |||||    
T  36997584 aatcaatggctaccgttgctcctatcaatgc 36997554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 51781674 - 51781804
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  51781674 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 51781773  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||| ||||| ||||| |||||    
T  51781774 aatcaatggctaccgttgctcctatcaatgc 51781804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 11110965 - 11110826
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||| ||||| ||||| |||||||| || || |    
T  11110965 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctg 11110866  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||||||||||||||||||||| ||||| ||||| |||||    
T  11110865 gagccggtcaatccatggctaccgttgctcctatcaatgc 11110826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 4416603 - 4416709
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||| |||||||||| ||||    
T  4416603 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatgactactgttgctccta 4416702  T
Q  192 ttaatgc 198  Q
    | |||||    
T  4416703 tcaatgc 4416709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 24327822 - 24327952
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  24327822 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 24327921  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||||||||| ||||| |||||    
T  24327922 aatcaatggctactgttgctcctatcaatgc 24327952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 28338989 - 28339095
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  28338989 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 28339088  T
Q  192 ttaatgc 198  Q
    | |||||    
T  28339089 tcaatgc 28339095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 31965044 - 31964938
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  31965044 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 31964945  T
Q  192 ttaatgc 198  Q
    | |||||    
T  31964944 tcaatgc 31964938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 50134642 - 50134536
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  50134642 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 50134543  T
Q  192 ttaatgc 198  Q
    | |||||    
T  50134542 tcaatgc 50134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 5609890 - 5609787
Alignment:
Q  95 tcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctatta 194  Q
    |||||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||| |    
T  5609890 tcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctcctatca 5609791  T
Q  195 atgc 198  Q
    ||||    
T  5609790 atgc 5609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 51796762 - 51796893
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggt-catcataagaagaaagaaacagaagtagggatggtatctgccggagccggt 166  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| ||  || || |||||||||||||| ||||| |||||||| || || |||||||||    
T  51796762 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggcacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggt 51796861  T
Q  167 caatccatggctactgttgcccctattaatgc 198  Q
    ||||| |||||||| ||||| ||||| |||||    
T  51796862 caatcaatggctaccgttgctcctatcaatgc 51796893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 29665526 - 29665450
Alignment:
Q  122 aagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  29665526 aagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 29665450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 48465569 - 48465708
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  48465569 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 48465668  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  48465669 gagccggtcaatcaatagctaccgttgctcctatcaatgc 48465708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 236
Target Start/End: Complemental strand, 19457022 - 19456793
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19457022 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 19456923  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19456922 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagt 19456823  T
Q  207 tatttccgtcgtacccgtatgcgcaatact 236  Q
    ||  |||||||||||| |||||||||||||    
T  19456822 tacctccgtcgtacccatatgcgcaatact 19456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 7 - 236
Target Start/End: Complemental strand, 21703765 - 21703536
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  21703765 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatac 21703666  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21703665 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcctagt 21703566  T
Q  207 tatttccgtcgtacccgtatgcgcaatact 236  Q
    ||  |||||||||||| ||||||| |||||    
T  21703565 tacctccgtcgtacccatatgcgccatact 21703536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 27435036 - 27434825
Alignment:
Q  19 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 118  Q
    |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| |||| ||||||||| |  ||||||||||||||||| |||||||| ||     
T  27435036 catgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacac 27434937  T
Q  119 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgt 218  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |   ||||||||    
T  27434936 cacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgt 27434837  T
Q  219 acccgtatgcgc 230  Q
    |||| |||||||    
T  27434836 acccatatgcgc 27434825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 27392630 - 27392812
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || ||||||| ||||||||| ||||||||||||| || |||     
T  27392630 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtat 27392729  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccc 189  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||  ||||||||||||||||    
T  27392730 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatctgtggctactgttgcccc 27392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 23129169 - 23128973
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  23129169 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 23129070  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||||||| || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  23129069 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 23128973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 28881852 - 28882048
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||| |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  28881852 gagatggtcaccatgggaactcgtctggaagaagctgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 28881951  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  28881952 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 28882048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 20837556 - 20837752
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||| | |  ||||||||||||||||| |    
T  20837556 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatccactgtgaatgcatcaaagaggtatg 20837655  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||| ||||| || | |||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  20837656 gtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcggagccggtcaatccatggctactgttgctcctatcaatgcagccca 20837752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 12655180 - 12655376
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| |||| |||| |  ||||||||||||||||| |    
T  12655180 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaaccctctgtgaatgcatcaaagaggtatg 12655279  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||| ||||| || | |||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  12655280 gtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcggagccggtcaatccatggctactgttgctcctatcaatgcagccca 12655376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 37374799 - 37374983
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  37374799 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 37374898  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 192  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||||    
T  37374899 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctat 37374983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 261317 - 261178
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  261317 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 261218  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  261217 gagccggtcaatcaatggctactgttgctcctatcaatgc 261178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 34279087 - 34279277
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||| | || |||||||| |    
T  34279087 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatacgtcgaagaggtatg 34279186  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  34279187 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctactgttgctcctatcaatgc 34279277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 12717125 - 12717018
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  12717125 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 12717026  T
Q  191 attaatgc 198  Q
    || |||||    
T  12717025 atcaatgc 12717018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 13937096 - 13936957
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  13937096 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 13936997  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  13936996 gagccggtcaatccatggctactgttgctcctatcaatgc 13936957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 21677701 - 21677595
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||    
T  21677701 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 21677602  T
Q  192 ttaatgc 198  Q
    | |||||    
T  21677601 tcaatgc 21677595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 12586490 - 12586629
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  12586490 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 12586589  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||||||| |||||||||| ||||| |||||    
T  12586590 gagccggtcaatccatgactactgttgctcctatcaatgc 12586629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 31876002 - 31876109
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  31876002 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 31876101  T
Q  191 attaatgc 198  Q
    || |||||    
T  31876102 atcaatgc 31876109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 34286043 - 34286182
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| |||||||||||||| || |  |    
T  34286043 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtg 34286142  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  34286143 gagccggtcaatccatggccactgttgctcctatcaatgc 34286182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 34291103 - 34291242
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| |||||||||||||| || |  |    
T  34291103 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtg 34291202  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  34291203 gagccggtcaatccatggccactgttgctcctatcaatgc 34291242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 34861401 - 34861508
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  34861401 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 34861500  T
Q  191 attaatgc 198  Q
    || |||||    
T  34861501 atcaatgc 34861508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 37686429 - 37686322
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  37686429 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 37686330  T
Q  191 attaatgc 198  Q
    || |||||    
T  37686329 atcaatgc 37686322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 37701694 - 37701587
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  37701694 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 37701595  T
Q  191 attaatgc 198  Q
    || |||||    
T  37701594 atcaatgc 37701587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 37925182 - 37925321
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  37925182 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37925281  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  37925282 gagccggtcaatcaatggctactgttgctcctatcaatgc 37925321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 39889783 - 39889890
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||| |||||||| |||    
T  39889783 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcct 39889882  T
Q  191 attaatgc 198  Q
    || |||||    
T  39889883 atcaatgc 39889890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 9350546 - 9350407
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9350546 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9350447  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  9350446 gagccggtcaatcaatgactactgttgctcctatcaatgc 9350407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 16829858 - 16829763
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  16829858 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 16829763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 16891623 - 16891718
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  16891623 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 16891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 27776896 - 27777035
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27776896 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27776995  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  27776996 gagccggtcaatcaatgactactgttgctcctatcaatgc 27777035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 27803381 - 27803520
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27803381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27803480  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  27803481 gagccggtcaatcaatgactactgttgctcctatcaatgc 27803520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 27816663 - 27816802
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27816663 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27816762  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  27816763 gagccggtcaatcaatgactactgttgctcctatcaatgc 27816802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 40233188 - 40233327
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  40233188 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 40233287  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  40233288 gagccggtcaatcaatggctaccgttgctcctatcaatgc 40233327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 11635792 - 11635602
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| |  |||||||| |    
T  11635792 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgttgaagaggtatg 11635693  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||| | ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  11635692 gtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcaggagccggtcaatccatggctaccgttgctcctatcaatgc 11635602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 11641981 - 11641791
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| |  |||||||| |    
T  11641981 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgttgaagaggtatg 11641882  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||| | ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  11641881 gtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcaggagccggtcaatccatggctaccgttgctcctatcaatgc 11641791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 19417042 - 19416912
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  19417042 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 19416943  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||||||||| ||||| |||||    
T  19416942 aatcaatggctactgttgctcctatcaatgc 19416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 22926547 - 22926441
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  22926547 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 22926448  T
Q  192 ttaatgc 198  Q
    | |||||    
T  22926447 tcaatgc 22926441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 32049526 - 32049614
Alignment:
Q  98 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||||||| ||||| || || || ||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||||||||||||    
T  32049526 aagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgc 32049614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 39052380 - 39052268
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  39052380 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 39052281  T
Q  159 gagccggtcaatc 171  Q
    |||||||||||||    
T  39052280 gagccggtcaatc 39052268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 236
Target Start/End: Original strand, 20053 - 20282
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20053 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtgttcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 20152  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20153 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 20252  T
Q  207 tatttccgtcgtacccgtatgcgcaatact 236  Q
    ||  |||||||||||| ||||||| |||||    
T  20253 tacctccgtcgtacccatatgcgccatact 20282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 30095 - 30291
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||||||  |||||||| |  |||||||| | |||||| |    
T  30095 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagccgaatcctctgtgaatgcatcgaggaggtatg 30194  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  30195 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 30291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 236
Target Start/End: Original strand, 15227529 - 15227758
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |     
T  15227529 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagatgaatcctccgcaaatgcatcaaagaggcat 15227628  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15227629 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagt 15227728  T
Q  207 tatttccgtcgtacccgtatgcgcaatact 236  Q
    ||  ||||||||||||||||||||||||||    
T  15227729 tacctccgtcgtacccgtatgcgcaatact 15227758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 15285538 - 15285311
Alignment:
Q  9 agatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacgg 108  Q
    |||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15285538 agatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggaacgg 15285439  T
Q  109 taacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtta 208  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15285438 taacggtcatcataagaagaaagaaacagaagtatggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagtta 15285339  T
Q  209 tttccgtcgtacccgtatgcgcaatact 236  Q
      ||| | |||||| |||||||||||||    
T  15285338 cctccattgtacccatatgcgcaatact 15285311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 7 - 236
Target Start/End: Original strand, 1899916 - 1900145
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || ||||||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  1899916 tgagatggtcaccatggggactcgtttggaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagaggtac 1900015  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1900016 ggtaacgatcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 1900115  T
Q  207 tatttccgtcgtacccgtatgcgcaatact 236  Q
    ||  |||||||||||| ||||||| |||||    
T  1900116 tacctccgtcgtacccatatgcgccatact 1900145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 14236140 - 14235939
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||||| ||||||||| ||||||||||  |||||||| ||||   ||||||||| ||||    
T  14236140 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagaagacattattgtgttcgagaaaggggaatcctctgcaagcacatcaaagaagtac 14236041  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||||| ||||    
T  14236040 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggccactgttacccctattaatgctgctcagt 14235941  T
Q  207 ta 208  Q
    ||    
T  14235940 ta 14235939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 14664675 - 14664871
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| || |||||  | || ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  14664675 gagatggtcaccatgggaactcgtctggaggaagccgttagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 14664774  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  14664775 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagctggtcaatccatggctactgttgctcctatcaatgctgccca 14664871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 15391948 - 15391771
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || | ||||| ||||||||| ||||||||||||| || |||     
T  15391948 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgggaaaggtgaatcctctgcaaatgcatcaaggaagtat 15391849  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgtt 184  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  15391848 ggcaatggtcatcataagaagaaagagacagaagtagggatggtatctgctggaaccagtcaatccatggctactgtt 15391771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 17013657 - 17013853
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  17013657 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 17013756  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||| ||||| ||||| |||||    
T  17013757 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagctggtcaatccatggctactgttgctcctatcaatgcagccca 17013853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 24592925 - 24592735
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  24592925 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 24592826  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  24592825 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 24592735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 14763918 - 14763728
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  14763918 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 14763819  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  14763818 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 14763728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 36345126 - 36344936
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  36345126 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 36345027  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  36345026 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 36344936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 6569510 - 6569700
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| || |||||||| ||||| || |    
T  6569510 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatg 6569609  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  6569610 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 6569700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 14098198 - 14098388
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| | |||||| || ||||| || |    
T  14098198 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 14098297  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  14098298 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 14098388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 19372918 - 19373108
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| |||||||| |    
T  19372918 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 19373017  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  19373018 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 19373108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 31127049 - 31126942
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||    
T  31127049 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcct 31126950  T
Q  191 attaatgc 198  Q
    || |||||    
T  31126949 atcaatgc 31126942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 27163931 - 27163753
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  27163931 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 27163832  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  27163831 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 27163753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 30753482 - 30753589
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||| | || || ||||||||||||||||||||||||||||| |||    
T  30753482 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatgatgtcagctggagccggtcaatccatggctactgttgcacct 30753581  T
Q  191 attaatgc 198  Q
    || |||||    
T  30753582 atcaatgc 30753589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 54833098 - 54833237
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  54833098 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 54833197  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  54833198 gagccggtcaatccatggccactgttgctcctatcaatgc 54833237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 18801176 - 18801046
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||||||||| |||||||| || || ||||||||||    
T  18801176 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacagaagtggggatggtgtcagctggagccggtc 18801077  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    || | |||||||||||||| ||||| |||||    
T  18801076 aagctatggctactgttgcacctatcaatgc 18801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 33674364 - 33674234
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  33674364 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 33674265  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||| ||||| ||||| |||||    
T  33674264 aatcaatggctaccgttgctcctatcaatgc 33674234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 40106240 - 40106062
Alignment:
Q  20 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 119  Q
    |||||||| ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||||||  | || |    
T  40106240 atggggacccgtcttgaggaagcagtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatagacacc 40106141  T
Q  120 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  40106140 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 40106062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 5005527 - 5005705
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | | | || |||||||| |    
T  5005527 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtacgtcgaagaggtatg 5005626  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  5005627 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgttgc 5005705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 21969441 - 21969536
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||||| |||||||| ||||| || || || ||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||||||||||||    
T  21969441 tgcatcgaagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgc 21969536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 39850331 - 39850470
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||| | || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  39850331 attgtgtttgagaaagctgaatcctctgtgaatacgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 39850430  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  39850431 gagccggtcaatcaatggctactgttgcacctatcaatgc 39850470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 16040980 - 16041197
Alignment:
Q  19 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 118  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  16040980 catgggaactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgtaaatgcatcaaagaggtatggtaacggtcat 16041079  T
Q  119 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  16041080 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgt 16041179  T
Q  219 acccgtatgcgcaatact 236  Q
    |||| ||||||| |||||    
T  16041180 acccatatgcgccatact 16041197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 7 - 236
Target Start/End: Complemental strand, 16450496 - 16450267
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| || |||    
T  16450496 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaaaagatac 16450397  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16450396 ggtaacggtcatcataagaagaaagaaacaaaagtagggatggtatctgccggagccggtcaatccatagctactgttgcccctattaatgctgcccagt 16450297  T
Q  207 tatttccgtcgtacccgtatgcgcaatact 236  Q
    ||  ||||||||||||||| ||||| ||||    
T  16450296 tacctccgtcgtacccgtacgcgcagtact 16450267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 16518916 - 16518720
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| |||| ||||||||| | |||||||||||||||||| |    
T  16518916 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtaaatgcatcaaagaggtatg 16518817  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16518816 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgccca 16518720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 16503880 - 16503684
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| |||| ||||||||| |  ||||||||||||||||| |    
T  16503880 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatg 16503781  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16503780 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgccca 16503684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 2154216 - 2154412
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || |  || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  2154216 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatgaaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 2154315  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  2154316 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 2154412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 10917365 - 10917169
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  | || || |  || ||||| || ||||||| ||||||||| |  ||||||||||||||||| |    
T  10917365 gagatggtcaccatgggaactcgtctggaagaagccgttagggatgaaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 10917266  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  10917265 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 10917169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 11425276 - 11425087
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  11425276 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 11425177  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatg 197  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||    
T  11425176 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatg 11425087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 5127635 - 5127825
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||| ||||| |  |||||||| |||||||| |    
T  5127635 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgagtcctctgtgaatgcatcgaagaggtatg 5127734  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  5127735 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 5127825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 31124554 - 31124744
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| || |||||||| ||||| || |    
T  31124554 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatg 31124653  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  31124654 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 31124744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 198
Target Start/End: Original strand, 45387034 - 45387176
Alignment:
Q  56 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 155  Q
    |||||||| || ||||||| |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| |    
T  45387034 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcag 45387133  T
Q  156 ccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    | |||||||||||||| |||||||||||||| ||||| |||||    
T  45387134 ctggagccggtcaatcaatggctactgttgctcctatcaatgc 45387176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 5147840 - 5147650
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || |||||||| |||||||| |    
T  5147840 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaatcttctgcgaatgcatcgaagaggtatg 5147741  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||  |||| ||||| |||||    
T  5147740 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccattgctcctatcaatgc 5147650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 24593041 - 24592851
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| | |||||| || ||||| || |    
T  24593041 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 24592942  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  24592941 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 24592851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 9618345 - 9618484
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  9618345 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 9618444  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  9618445 gagccggtcaatcaatggctactgttgctcctatcaatgc 9618484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 26275511 - 26275404
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  26275511 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 26275412  T
Q  191 attaatgc 198  Q
    || |||||    
T  26275411 atcaatgc 26275404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 4145539 - 4145433
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||    
T  4145539 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 4145440  T
Q  192 ttaatgc 198  Q
    | |||||    
T  4145439 tcaatgc 4145433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 16736960 - 16736770
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  16736960 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 16736861  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  16736860 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 16736770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 16752014 - 16751824
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  16752014 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 16751915  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  16751914 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 16751824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 17523175 - 17523365
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  17523175 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 17523274  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  17523275 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 17523365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 17530040 - 17529850
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  17530040 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 17529941  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  17529940 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 17529850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 26320284 - 26320179
Alignment:
Q  93 catcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 192  Q
    |||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||||    
T  26320284 catcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctat 26320185  T
Q  193 taatgc 198  Q
     |||||    
T  26320184 caatgc 26320179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 3445020 - 3445127
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  3445020 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 3445119  T
Q  191 attaatgc 198  Q
    || |||||    
T  3445120 atcaatgc 3445127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 11441263 - 11441393
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  11441263 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 11441362  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||| ||||| ||||| |||||    
T  11441363 aatcaatggctaccgttgctcctatcaatgc 11441393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 26486161 - 26486054
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| || ||||| ||||| |||    
T  26486161 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatagctaccgttgctcct 26486062  T
Q  191 attaatgc 198  Q
    || |||||    
T  26486061 atcaatgc 26486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 26670363 - 26670224
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  26670363 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 26670264  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  26670263 gagccggtcaatcaatagctaccgttgctcctatcaatgc 26670224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 31564816 - 31564709
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| |||    
T  31564816 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 31564717  T
Q  191 attaatgc 198  Q
    || |||||    
T  31564716 atcaatgc 31564709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 26434900 - 26435084
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||| | ||||| || |    
T  26434900 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcaccgaagagatatg 26434999  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 192  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||| |||||||| |||||||| |||||    
T  26435000 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcaggagccggtcagtccatggccactgttgctcctat 26435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 26538322 - 26538183
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  26538322 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 26538223  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  26538222 gagccggtcaatcaatagctaccgttgctcctatcaatgc 26538183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 7 - 236
Target Start/End: Original strand, 20460748 - 20460977
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  20460748 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattatattcgagaaagttgaatcctccgccaatgcatcaaagaggtac 20460847  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20460848 ggtaacggtcatcataagaagaaagaaatagaagtagggatggtatctgccggagccggtcaatccatggctactattgcccctattaatgctgcccagt 20460947  T
Q  207 tatttccgtcgtacccgtatgcgcaatact 236  Q
    ||  |||| |||||||||||||||||||||    
T  20460948 tacctccgccgtacccgtatgcgcaatact 20460977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 16208640 - 16208439
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| |||    
T  16208640 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagagttac 16208541  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16208540 ggtaacggtcatcataagaagaaagaaacagaagtagagatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 16208441  T
Q  207 ta 208  Q
    ||    
T  16208440 ta 16208439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 41793922 - 41793726
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||| |||| |  | ||||||||||||||| |    
T  41793922 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaaacctctgtgagtgcatcaaagaggtatg 41793823  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| ||||| || |||||||| || ||||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  41793822 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgcagccca 41793726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 10962362 - 10962501
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  10962362 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 10962461  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  10962462 gagccggtcaatcaatggctactgttgctcctatcaatgc 10962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 51637910 - 51638049
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  51637910 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 51638009  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  51638010 gagccggtcaatcaatggctactgttgctcctatcaatgc 51638049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 28584682 - 28584812
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  28584682 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 28584781  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||||||||| ||||| |||||    
T  28584782 aatcaatggctactgttgctcctatcaatgc 28584812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 23891855 - 23892079
Alignment:
Q  6 atgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggta 105  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  23891855 atgagatggtcaccatggggactcgtctggaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggta 23891954  T
Q  106 cggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccag 205  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     
T  23891955 tggtaacggacatcataagaagaaagaaacagaagtagggatggtatctgccggagccgatcaatccatggctactgttgctcctattaatgctgcccaa 23892054  T
Q  206 ttatttccgtcgtacccgtatgcgc 230  Q
     |   |||||||||||| |||||||    
T  23892055 atgcctccgtcgtacccatatgcgc 23892079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 25198682 - 25198905
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || ||||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25198682 tgagatggtcaccatggggactcatctggaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggtac 25198781  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 206  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| |    
T  25198782 ggtaacggacatcataagaagaaggaaacagaagtagggatggtatccgccggagccggtcaatccatggctactgttgctcctattaatgcttcccaat 25198881  T
Q  207 tatttccgtcgtacccgtatgcgc 230  Q
    |   |||||||||||| |||||||    
T  25198882 tgcctccgtcgtacccatatgcgc 25198905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 8 - 202
Target Start/End: Original strand, 24951761 - 24951955
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  24951761 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24951860  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcc 202  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  24951861 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgcc 24951955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 24688668 - 24688472
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  24688668 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24688569  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  24688568 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 24688472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 30934287 - 30934483
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  30934287 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 30934386  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||| ||||| |||||    
T  30934387 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctaccggagccggccaatccatgactactgttgctcctatcaatgcagccca 30934483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 23752961 - 23752765
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  23752961 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 23752862  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  23752861 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 23752765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 23718500 - 23718303
Alignment:
Q  8 gagatggacatcatggggactcgtctagaag-aagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    ||||||| || |||||| |||||||| |||| ||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| ||||||||     
T  23718500 gagatggtcaccatgggaactcgtctggaaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtat 23718401  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  23718400 ggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 23718303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 11549005 - 11549201
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  11549005 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 11549104  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  11549105 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 11549201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 22999624 - 22999429
Alignment:
Q  9 agatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacgg 108  Q
    |||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| ||    
T  22999624 agatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatgg 22999525  T
Q  109 taacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  22999524 taatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 22999429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 33777138 - 33777328
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  33777138 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 33777237  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||    
T  33777238 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagctggtcaatccatggctactgttgctcctatcaatgc 33777328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 15659271 - 15659081
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  15659271 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 15659172  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  15659171 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 15659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 40474051 - 40473873
Alignment:
Q  20 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 119  Q
    ||||| || ||||| ||||||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || ||||| |||||||| || || |    
T  40474051 atgggaacccgtcttgaagaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatacggtaatggacacc 40473952  T
Q  120 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||||||||| |||||    
T  40473951 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgcccctatcaatgc 40473873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 2510753 - 2510898
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | ||||||||||||||| ||||| || || || |||||||||||||| ||||| || |||||||| || |    
T  2510753 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctg 2510852  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  2510853 gagccggtcaatccatggctaccgttgctcctatcaatgcagccca 2510898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 9317153 - 9317292
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | ||||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9317153 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9317252  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  9317253 gagccggtcaatcaatggctactgttgctcctatcaatgc 9317292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 6874004 - 6874143
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | ||||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  6874004 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 6874103  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  6874104 gagccggtcaatcaatgactactgttgctcctatcaatgc 6874143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 12131889 - 12131996
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  12131889 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 12131988  T
Q  191 attaatgc 198  Q
    || |||||    
T  12131989 atcaatgc 12131996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 24681171 - 24681278
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  24681171 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 24681270  T
Q  191 attaatgc 198  Q
    || |||||    
T  24681271 atcaatgc 24681278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 24723698 - 24723805
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  24723698 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 24723797  T
Q  191 attaatgc 198  Q
    || |||||    
T  24723798 atcaatgc 24723805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 37771427 - 37771320
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||    
T  37771427 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgcacct 37771328  T
Q  191 attaatgc 198  Q
    || |||||    
T  37771327 atcaatgc 37771320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 5637561 - 5637751
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| ||||| || |    
T  5637561 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 5637660  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  5637661 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 5637751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 8665902 - 8665796
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||    
T  8665902 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 8665803  T
Q  192 ttaatgc 198  Q
    | |||||    
T  8665802 tcaatgc 8665796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 198
Target Start/End: Complemental strand, 15759320 - 15759178
Alignment:
Q  56 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 155  Q
    |||||||| || ||||||| |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  15759320 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcag 15759221  T
Q  156 ccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    | ||||| |||||||| |||||||||||||| ||||| |||||    
T  15759220 ctggagcaggtcaatcaatggctactgttgctcctatcaatgc 15759178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 18375923 - 18375745
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  18375923 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 18375824  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  18375823 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 18375745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 30151669 - 30151847
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  30151669 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 30151768  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  30151769 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 30151847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 37359154 - 37358976
Alignment:
Q  20 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 119  Q
    ||||| || ||||| || |||||  ||||||| || || |||||||| ||||||| |||||| ||  | | |||||| |||||||| ||||| || || |    
T  37359154 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtatttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacacc 37359055  T
Q  120 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  37359054 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 37358976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 192
Target Start/End: Complemental strand, 9549003 - 9548870
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9549003 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9548904  T
Q  159 gagccggtcaatccatggctactgttgcccctat 192  Q
    ||||||||||||||||||| |||||||| |||||    
T  9548903 gagccggtcaatccatggccactgttgctcctat 9548870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 41674420 - 41674544
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    |||||||  |||||||| |  ||||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  41674420 gagaaagccgaatcctctgtgaatgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 41674519  T
Q  168 aatccatggctactgttgcccctat 192  Q
    ||||||||||||||||||| |||||    
T  41674520 aatccatggctactgttgctcctat 41674544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 18501208 - 18501069
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  18501208 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 18501109  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  18501108 gagccggtcaatcaatggctactgttgctcctatcaatgc 18501069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 26480094 - 26480233
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  26480094 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctg 26480193  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  26480194 gagccggtcaatcaatggctactgttgctcctatcaatgc 26480233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 30168171 - 30168298
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  30168171 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 30168270  T
Q  159 gagccggtcaatccatggctactgttgc 186  Q
    ||||||||||||||||||||||| ||||    
T  30168271 gagccggtcaatccatggctactattgc 30168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 31431130 - 31431269
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  31431130 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 31431229  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||||||||||||  ||||||||||||| ||||| |||||    
T  31431230 gagccggtcaatctgtggctactgttgctcctatcaatgc 31431269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 31826847 - 31826740
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  31826847 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 31826748  T
Q  191 attaatgc 198  Q
    || |||||    
T  31826747 atcaatgc 31826740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 37671920 - 37671813
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| |||||||| ||||| |||    
T  37671920 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatctatggctaccgttgctcct 37671821  T
Q  191 attaatgc 198  Q
    || |||||    
T  37671820 atcaatgc 37671813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 37754670 - 37754809
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| |||||| || |||| ||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  37754670 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37754769  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  37754770 gagccggtcaatcaatggctactgttgcacctatcaatgc 37754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 3789177 - 3789367
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| ||||| || |    
T  3789177 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 3789276  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  3789277 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 3789367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 22888287 - 22888352
Alignment:
Q  171 ccatggctactgttgcccctattaatgctgcccagttatttccgtcgtacccgtatgcgcaatact 236  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| |||||    
T  22888287 ccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatact 22888352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 34616223 - 34616368
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  34616223 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34616322  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||||||||||| | |||||||||||||| ||||| ||||| |||||    
T  34616323 gagccggtcaagctatggctactgttgcacctatcaatgcagccca 34616368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 33516090 - 33516185
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  33516090 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 33516185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 43077900 - 43078090
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || ||||| || |    
T  43077900 gagatggtcaccatgggaacccgtctcgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatg 43077999  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| ||  | |||||||||||| | |||||||||||||| ||||| |||||    
T  43078000 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcaactggagccggtcaagctatggctactgttgcacctatcaatgc 43078090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 32599897 - 32599784
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||| ||||| ||||| |||||||| || || |||||||||||||| ||| |||||||||| |||    
T  32599897 tgcatcgaagaggtatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctggagccggtcaatcaatgactactgttgctcct 32599798  T
Q  191 attaatgctgccca 204  Q
    || ||||| |||||    
T  32599797 atcaatgcagccca 32599784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 13325304 - 13325165
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  13325304 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 13325205  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||| |||||||| ||||| ||||| |||||    
T  13325204 gagctggtcaatcaatggctaccgttgctcctatcaatgc 13325165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 28648937 - 28649055
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  28648937 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 28649036  T
Q  168 aatccatggctactgttgc 186  Q
    || | ||||||||||||||    
T  28649037 aagctatggctactgttgc 28649055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 28960226 - 28960120
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| | |||||||||||| |||    
T  28960226 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaacggctactgttgcacct 28960127  T
Q  191 attaatg 197  Q
    || ||||    
T  28960126 atcaatg 28960120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 29967517 - 29967387
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || || ||||||||||| ||||| |||||||| || || |||||||| |    
T  29967517 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggagccgggc 29967418  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||||||||| ||||| |||||    
T  29967417 aatcaatggctactgttgctcctatcaatgc 29967387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 30029126 - 30029256
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || || ||||||||||| ||||| |||||||| || || |||||||| |    
T  30029126 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggagccgggc 30029225  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||||||||| ||||| |||||    
T  30029226 aatcaatggctactgttgctcctatcaatgc 30029256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 16283091 - 16283313
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || |||||||||||||||| ||||||||| |  ||||||||||||||||| |    
T  16283091 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtattcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 16283190  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 207  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |    
T  16283191 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 16283290  T
Q  208 atttccgtcgtacccgtatgcgc 230  Q
       |||||||||||| |||||||    
T  16283291 gcctccgtcgtacccatatgcgc 16283313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 19687740 - 19687936
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  19687740 gagatggtcaccatgggaacccgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 19687839  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  19687840 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagccggtcaatccatggctactgttgctcctatcaatgctgccca 19687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 22081446 - 22081252
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || || |||  ||||||||| ||||||||||||| || |||     
T  22081446 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgaaaaatgtgaatcctctgcaaatgcatcaaggaagtat 22081347  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgc 201  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| || ||||||||    
T  22081346 ggcaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggctactgttgcccccatcaatgctgc 22081252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 16277196 - 16277392
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  16277196 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 16277295  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  16277296 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 16277392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 14557269 - 14557465
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  14557269 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 14557368  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||| || ||||| ||||| |||||    
T  14557369 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgtcgctcctatcaatgcagccca 14557465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 2137832 - 2137636
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||| | || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  2137832 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaatgaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 2137733  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  2137732 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 2137636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 27609478 - 27609282
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| || |||||  |||| || || || ||||| ||||||||||  |||||||| |  ||||||||||||||||| |    
T  27609478 gagatggtcaccatgggaactcgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagccgaatcctctgtgaatgcatcaaagaggtatg 27609379  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  27609378 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 27609282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 18710228 - 18710418
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18710228 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18710327  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  18710328 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 18710418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 19674080 - 19674270
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || |||||||| |||||||||| |||||| || || | ||| || |||||||| |    
T  19674080 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaattattgtgttcgagaaagctgaatcttctgcgagtgcgtcgaagaggtatg 19674179  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || ||||| |||||||||||||| || || |||||||| || || |||||| |||||||||||||||| ||||| ||||| |||||    
T  19674180 gtaatggacatcacaagaagaaagaaacggacgtggggatggtgtcagctggagccagtcaatccatggctaccgttgctcctatcaatgc 19674270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 31490263 - 31490133
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  31490263 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtc 31490164  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||||||||||||||| |||||    
T  31490163 aatcaatggctactgttgcccctatcaatgc 31490133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 31354250 - 31354362
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| || ||||| ||||    
T  31354250 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatccatggccaccgttgctccta 31354349  T
Q  192 ttaatgctgccca 204  Q
    | ||||| |||||    
T  31354350 tcaatgcagccca 31354362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 19208850 - 19208743
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||| ||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  19208850 tgcatcgaagaagtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 19208751  T
Q  191 attaatgc 198  Q
    || |||||    
T  19208750 atcaatgc 19208743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 19286158 - 19286297
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  19286158 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 19286257  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  19286258 gagccggtcaatccatggccactgttgctcctatcaatgc 19286297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 28362477 - 28362350
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  28362477 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 28362378  T
Q  159 gagccggtcaatccatggctactgttgc 186  Q
    |||||||||||||||||||||| |||||    
T  28362377 gagccggtcaatccatggctaccgttgc 28362350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 3330080 - 3329902
Alignment:
Q  20 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 119  Q
    ||||| |||||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || |    
T  3330080 atgggaactcgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacacc 3329981  T
Q  120 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    | |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||  ||||| ||||| |||||    
T  3329980 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctatcgttgctcctatcaatgc 3329902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 29828967 - 29829145
Alignment:
Q  20 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 119  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || |    
T  29828967 atgggaacccgtcttgaggaagccgtcagagatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacacc 29829066  T
Q  120 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  29829067 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 29829145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 19518665 - 19518526
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  19518665 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 19518566  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  19518565 gagccggtcaatcaatgactactgttgctcctatcaatgc 19518526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 33258425 - 33258555
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  33258425 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatgggcaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 33258524  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||||||||| ||||| |||||    
T  33258525 aatcaatggctactgttgctcctatcaatgc 33258555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 12093306 - 12093116
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| ||||| || |    
T  12093306 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagagatatg 12093207  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||| ||||| ||||||||| |||| ||||| |||||    
T  12093206 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggccaatctatggctactattgctcctatcaatgc 12093116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 111; Significance: 4e-56; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 29405 - 29627
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| ||||| |||| ||||||||| |  ||||||||||||||||| |    
T  29405 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatg 29504  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 207  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |    
T  29505 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 29604  T
Q  208 atttccgtcgtacccgtatgcgc 230  Q
       ||| ||||||||||||||||    
T  29605 gcctccatcgtacccgtatgcgc 29627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 40683 - 40487
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  40683 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 40584  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  40583 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 40487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 47599 - 47403
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| |||||||||| |||||||||||  ||||||||||||||||| |    
T  47599 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctccgtgaatgcatcaaagaggtatg 47500  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || |||||||||||| |||||||||||||||| | ||| ||||| |||||    
T  47499 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaacccatggctactgttgctcttatcaatgcagccca 47403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 21208 - 21400
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| || |||||||| || ||||||| ||||||||| ||||||||||||| || |||     
T  21208 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagacggaattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtat 21307  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgct 199  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||||||||||||||| || ||||||    
T  21308 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccgtggctactgttgcccccatcaatgct 21400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 26934 - 27130
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  26934 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 27033  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  27034 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 27130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 13299508 - 13299312
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||||||||| || |    
T  13299508 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagagatatg 13299409  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||    
T  13299408 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagctggtcaatccatggctactgttgctcctatcaatgcagccca 13299312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 22935434 - 22935238
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  22935434 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 22935335  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||||||| || || |||||||||||||| ||| |||||||||| || ||||| ||||||||||||||| |||||||||| ||||| ||||| |||||    
T  22935334 gtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccggggccggtcaatccatgactactgttgctcctatcaatgcagccca 22935238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 23857879 - 23857683
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  23857879 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 23857780  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||||||| || || |||||||||||||| ||| |||||||||| || ||||| ||||||||||||||| |||||||||| ||||| ||||| |||||    
T  23857779 gtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccggggccggtcaatccatgactactgttgctcctatcaatgcagccca 23857683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 24863356 - 24863552
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||| | |||||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  24863356 gagatggtcaccatgagaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24863455  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  24863456 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 24863552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 20160345 - 20160534
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||| || ||||||||||||||| |||| ||||| || ||||| || || |||| |||||||||||  |  ||| |||| ||||||    
T  20160345 tgagatggtcaccatgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtac 20160444  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgct 199  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || |||    |||||||||||||||||||||||||||||| ||||||||    
T  20160445 ggtaacggtcatcataagaagaaggaaacagaagtagggatggaatttgc---tgccggtcaatccatggctactgttgcccctgttaatgct 20160534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 22172486 - 22172297
Alignment:
Q  7 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 106  Q
    |||||||| || |||||| || ||||||||||||||| |||| ||||| || ||||| || || |||| |||||||||||  |  ||| |||| ||||||    
T  22172486 tgagatggtcaccatgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtac 22172387  T
Q  107 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgct 199  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || |||    |||||||||||||||||||||||||||||| ||||||||    
T  22172386 ggtaacggtcatcataagaagaaggaaacagaagtagggatggaatttgc---tgccggtcaatccatggctactgttgcccctgttaatgct 22172297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 15424874 - 15424678
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| |||||||||| |||||| || |  ||||||||||||||||| |    
T  15424874 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcttctgtgaatgcatcaaagaggtatg 15424775  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  15424774 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 15424678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 26988640 - 26988836
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  26988640 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 26988739  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  26988740 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 26988836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 26999712 - 26999908
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  26999712 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 26999811  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  26999812 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 26999908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 24305124 - 24304979
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| |||||||||| ||||||||| |  ||||||||||||||||| ||||| || || || |||||||||||||| |||||||||||||| || || |    
T  24305124 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 24305025  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||    
T  24305024 gagccggtcaatccatggctactgtcgctcctatcaatgctgccca 24304979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 26918070 - 26918209
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| |||||||||| ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| |||||||||||||| || || |    
T  26918070 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 26918169  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  26918170 gagccggtcaatccatggctactgttgctcctatcaatgc 26918209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 16749493 - 16749677
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  | |||||| |||||||| |    
T  16749493 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatgggatcattgtgttcgagaaagctgaatcctctgtgagtgcatcgaagaggtatg 16749592  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 192  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| |||||    
T  16749593 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctat 16749677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 29549117 - 29549307
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| |||||||| |    
T  29549117 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagaggtatg 29549216  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || ||||| |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  29549217 gtaatggacatcacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 29549307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 27044029 - 27044225
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| ||||| || |    
T  27044029 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 27044128  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  27044129 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgcagccca 27044225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 3695702 - 3695892
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| ||||| || |    
T  3695702 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatg 3695801  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  3695802 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 3695892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 17024901 - 17025097
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||||||  |||||||| |  |||||||| |||||||| |    
T  17024901 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatg 17025000  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 204  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || |||||||||||| | |||||||||||||| ||||| ||||| |||||    
T  17025001 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctggagccggtcaagctatggctactgttgctcctatcaatgcagccca 17025097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 4525011 - 4525118
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  4525011 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctactgttgcacct 4525110  T
Q  191 attaatgc 198  Q
    || |||||    
T  4525111 atcaatgc 4525118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 4757483 - 4757590
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| ||||||||||| || |||    
T  4757483 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatcaatggctactgtcgctcct 4757582  T
Q  191 attaatgc 198  Q
    || |||||    
T  4757583 atcaatgc 4757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 4772687 - 4772826
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || ||||    
T  4772687 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 4772786  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  4772787 gagccggtcaatctatggctaccgttgctcctatcaatgc 4772826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 27007402 - 27007541
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27007402 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27007501  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  27007502 gagccggtcaatcaatggctactgttgctcctatcaatgc 27007541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 27484807 - 27484946
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| |||||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27484807 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27484906  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  27484907 gagccggtcaatcaatggctaccgttgctcctatcaatgc 27484946  T

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Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 29572735 - 29572842
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  29572735 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 29572834  T
Q  191 attaatgc 198  Q
    || |||||    
T  29572835 atcaatgc 29572842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 22477673 - 22477602
Alignment:
Q  165 gtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgtacccgtatgcgcaatact 236  Q
    ||||||||||||||||||||||||| |||||||||||||| |||  || |||||||||||||||||| ||||    
T  22477673 gtcaatccatggctactgttgccccaattaatgctgcccaattacctctgtcgtacccgtatgcgcagtact 22477602  T

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Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 29501096 - 29501235
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||  |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  29501096 attgtgtttgagaaagctgaatcctttgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 29501195  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||||||||||||||||||||| ||||| ||||| |||||    
T  29501196 gagccggtcaatccatggctaccgttgctcctatcaatgc 29501235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 30558490 - 30558395
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  30558490 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 30558395  T

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Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 34463867 - 34463728
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  34463867 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34463768  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  34463767 gagccggtcaatcaatgactactgttgctcctatcaatgc 34463728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 4546341 - 4546151
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  4546341 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 4546242  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  4546241 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 4546151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 16944524 - 16944394
Alignment:
Q  68 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 167  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  16944524 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 16944425  T
Q  168 aatccatggctactgttgcccctattaatgc 198  Q
    |||| |||||||||||||| ||||| |||||    
T  16944424 aatcaatggctactgttgctcctatcaatgc 16944394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 28207081 - 28207271
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  28207081 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 28207180  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  28207181 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 28207271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 26778100 - 26778000
Alignment:
Q  92 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 191  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| ||||    
T  26778100 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatggctactgttgcaccta 26778001  T
Q  192 t 192  Q
    |    
T  26778000 t 26778000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 27360484 - 27360377
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| |||    
T  27360484 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 27360385  T
Q  191 attaatgc 198  Q
    || |||||    
T  27360384 atcaatgc 27360377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 27450827 - 27450720
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| |||    
T  27450827 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 27450728  T
Q  191 attaatgc 198  Q
    || |||||    
T  27450727 atcaatgc 27450720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 16673817 - 16673956
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  16673817 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 16673916  T
Q  159 gagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  16673917 gagccggtcaatcaatagctaccgttgctcctatcaatgc 16673956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 4724688 - 4724510
Alignment:
Q  20 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 119  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| || ||||| ||||| || || |    
T  4724688 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtatggtaatggacacc 4724589  T
Q  120 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    | |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  4724588 acaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 4724510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 26116893 - 26116792
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| || ||||| ||||| |||    
T  26116893 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatagctaccgttgctcct 26116794  T
Q  191 at 192  Q
    ||    
T  26116793 at 26116792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 27273128 - 27272947
Alignment:
Q  20 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 119  Q
    ||||||||||||||||| |||||  |||| ||||| || |||||||| ||||| | ||| || ||  ||||||  |  |||||||| || || || || |    
T  27273128 atggggactcgtctagaggaagccgtcagggaaggtatcattgtatttgagaagggtgagtcttctacaaatgggttgaagaggtatggcaatggccacc 27273029  T
Q  120 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgc 201  Q
    | |||||||| |||||||| || || ||||||||  | ||||| |||||  | |  |||||||| |||||| ||||||||||    
T  27273028 acaagaagaaggaaacagaggttggaatggtatcctctggagcaggtcagactacagctactgtcgcccctgttaatgctgc 27272947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 27630254 - 27630077
Alignment:
Q  20 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 119  Q
    ||||||||||||||||| || ||  ||||||| || || |||||||| ||||| | ||| || ||  ||| ||  || |||||||| || || || || |    
T  27630254 atggggactcgtctagaggaggccgtcagagagggtatcattgtatttgagaagggtgagtcttctacaagtgggtcgaagaggtatggcaatggccacc 27630155  T
Q  120 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatg 197  Q
    | |||||||| |||||||| || || ||||||||  | ||||| ||||| || | ||||||||| |||||| ||||||    
T  27630154 acaagaagaaggaaacagaggttggaatggtatcctcgggagcaggtcagtctacggctactgtcgcccctgttaatg 27630077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 744 - 554
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  744 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 645  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| |||||||||||||| ||  | ||||||||||||||||||||||||||||| ||||| |||||    
T  644 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaactggagccggtcaatccatggctactgttgctcctatcaatgc 554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 7874 - 8064
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| |||||||| |    
T  7874 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 7973  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||  ||||||||||||| ||||| |||||    
T  7974 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatctgtggctactgttgctcctatcaatgc 8064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 48769 - 48568
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatc-aaagaggtac 106  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| |||||||||| ||||||||| |  |||||||| |||||||||     
T  48769 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaaagaggtat 48670  T
Q  107 ggtaac-ggtcatcataagaagaaagaaacagaagta-gggatggtatc-tgccggagccgg--tcaatccatggcta-ctgttgcccctattaatgctg 200  Q
    |||||| || || || |||||||||||||| |||||| |||||||| || ||||||||||||   ||||||||||||| ||||||| ||||| |||||||    
T  48669 ggtaacgggacaccacaagaagaaagaaacggaagtaggggatggtgtcttgccggagccgggtccaatccatggctacctgttgctcctatcaatgctg 48570  T
Q  201 cc 202  Q
    ||    
T  48569 cc 48568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 26816 - 26626
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| | |||||| || ||||| || |    
T  26816 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 26717  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  26716 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 26626  T

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Target: scaffold0350 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 7770 - 7663
Alignment:
Q  91 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 190  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  7770 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 7671  T
Q  191 attaatgc 198  Q
    || |||||    
T  7670 atcaatgc 7663  T

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Target: scaffold0237 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 15544 - 15366
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  15544 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 15445  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 186  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  15444 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 15366  T

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Target: scaffold0038 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 7579 - 7769
Alignment:
Q  8 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 107  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  7579 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 7678  T
Q  108 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  7679 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 7769  T

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Target: scaffold0159 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 9593 - 9490
Alignment:
Q  95 tcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctatta 194  Q
    |||||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||| |    
T  9593 tcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctcctatca 9494  T
Q  195 atgc 198  Q
    ||||    
T  9493 atgc 9490  T

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Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 5682 - 5821
Alignment:
Q  59 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 158  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  5682 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagt-gggatggtgtcagctg 5780  T
Q  159 gagccggtcaatc-catggctactgttgcccctattaatgc 198  Q
    |||||||||||||  |||||||||||||| ||||| |||||    
T  5781 gagccggtcaatcaaatggctactgttgctcctatcaatgc 5821  T

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Target: scaffold0496 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 197 - 157
Alignment:
Q  158 ggagccggtcaatccatggctactgttgcccctattaatgc 198  Q
    |||||||||||||| |||||||||||||| ||||| |||||    
T  197 ggagccggtcaatcaatggctactgttgcacctatcaatgc 157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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